Lag0015206 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGCATAATTCCTACGCCAACGTCAGTTCTGTGAAATCTCGCAGAGTTGTTCGCGCGGATCTGCCACCGAACGCGACGACGGTGAATGCGACGGAGCCGACTTCTCCGACGAAACCTCGCCGAGTCAGTGCTCGCGACTTGGCACCGAAGGCGACGATAGTGAAGAAGCCGCGTTCTCCGACAAAACGCCGAGTGATTAGCTCCCGTGATTTGGCTCCGGAGGCGAGGAAGTCGAGTTCTCCGGCACCGGTGACGATCACAACATCAATCGCGGCACTGCAAACTCCGCCGTCACCGAGAAGAGCTGCTCGCACAGCGATGCTGAAAGCTAGGTTCGCCGGTACGATCGCGAAAGCACAGAAGCAGCTTTTCGGCGATAGAAAGGAAATGATCGTTCCGATTCCGGCGACGACGAAGAAACCTACGACTGAAGAACTGAGAGAATTGGCCCGAAAAGCTTTAGAGACGATGGAGCGGACTGTTGAGTTGGACGACAGCCATAAATCGGTGAGGGATTTGCAGCGCCTCTGTGGCTGGCCGATTCCGTACGTTGGTGGGTTTCTAAACAGAATGCATTACCTTGGTTTATATTTGAAGAACTAG ATGAAGCATAATTCCTACGCCAACGTCAGTTCTGTGAAATCTCGCAGAGTTGTTCGCGCGGATCTGCCACCGAACGCGACGACGGTGAATGCGACGGAGCCGACTTCTCCGACGAAACCTCGCCGAGTCAGTGCTCGCGACTTGGCACCGAAGGCGACGATAGTGAAGAAGCCGCGTTCTCCGACAAAACGCCGAGTGATTAGCTCCCGTGATTTGGCTCCGGAGGCGAGGAAGTCGAGTTCTCCGGCACCGGTGACGATCACAACATCAATCGCGGCACTGCAAACTCCGCCGTCACCGAGAAGAGCTGCTCGCACAGCGATGCTGAAAGCTAGGTTCGCCGGTACGATCGCGAAAGCACAGAAGCAGCTTTTCGGCGATAGAAAGGAAATGATCGTTCCGATTCCGGCGACGACGAAGAAACCTACGACTGAAGAACTGAGAGAATTGGCCCGAAAAGCTTTAGAGACGATGGAGCGGACTGTTGAGTTGGACGACAGCCATAAATCGGTGAGGGATTTGCAGCGCCTCTGTGGCTGGCCGATTCCGTACGTTGGTGGGTTTCTAAACAGAATGCATTACCTTGGTTTATATTTGAAGAACTAG ATGAAGCATAATTCCTACGCCAACGTCAGTTCTGTGAAATCTCGCAGAGTTGTTCGCGCGGATCTGCCACCGAACGCGACGACGGTGAATGCGACGGAGCCGACTTCTCCGACGAAACCTCGCCGAGTCAGTGCTCGCGACTTGGCACCGAAGGCGACGATAGTGAAGAAGCCGCGTTCTCCGACAAAACGCCGAGTGATTAGCTCCCGTGATTTGGCTCCGGAGGCGAGGAAGTCGAGTTCTCCGGCACCGGTGACGATCACAACATCAATCGCGGCACTGCAAACTCCGCCGTCACCGAGAAGAGCTGCTCGCACAGCGATGCTGAAAGCTAGGTTCGCCGGTACGATCGCGAAAGCACAGAAGCAGCTTTTCGGCGATAGAAAGGAAATGATCGTTCCGATTCCGGCGACGACGAAGAAACCTACGACTGAAGAACTGAGAGAATTGGCCCGAAAAGCTTTAGAGACGATGGAGCGGACTGTTGAGTTGGACGACAGCCATAAATCGGTGAGGGATTTGCAGCGCCTCTGTGGCTGGCCGATTCCGTACGTTGGTGGGTTTCTAAACAGAATGCATTACCTTGGTTTATATTTGAAGAACTAG MKHNSYANVSSVKSRRVVRADLPPNATTVNATEPTSPTKPRRVSARDLAPKATIVKKPRSPTKRRVISSRDLAPEARKSSSPAPVTITTSIAALQTPPSPRRAARTAMLKARFAGTIAKAQKQLFGDRKEMIVPIPATTKKPTTEELRELARKALETMERTVELDDSHKSVRDLQRLCGWPIPYVGGFLNRMHYLGLYLKN Homology
BLAST of Lag0015206 vs. NCBI nr
Match: KAA0061663.1 (transcription factor GTE9 isoform X4 [Cucumis melo var. makuwa] >TYK21138.1 transcription factor GTE9 isoform X4 [Cucumis melo var. makuwa]) HSP 1 Score: 103.6 bits (257), Expect = 2.0e-18 Identity = 69/176 (39.20%), Postives = 89/176 (50.57%), Query Frame = 0
BLAST of Lag0015206 vs. NCBI nr
Match: KAG6571342.1 (hypothetical protein SDJN03_30257, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 93.2 bits (230), Expect = 2.7e-15 Identity = 71/196 (36.22%), Postives = 94/196 (47.96%), Query Frame = 0
BLAST of Lag0015206 vs. NCBI nr
Match: PQQ06297.1 (hypothetical protein Pyn_02267 [Prunus yedoensis var. nudiflora]) HSP 1 Score: 59.7 bits (143), Expect = 3.4e-05 Identity = 41/93 (44.09%), Postives = 54/93 (58.06%), Query Frame = 0
BLAST of Lag0015206 vs. NCBI nr
Match: RZS19084.1 (hypothetical protein BHM03_00051432 [Ensete ventricosum]) HSP 1 Score: 58.2 bits (139), Expect = 9.8e-05 Identity = 56/160 (35.00%), Postives = 78/160 (48.75%), Query Frame = 0
BLAST of Lag0015206 vs. NCBI nr
Match: RWW19087.1 (hypothetical protein GW17_00016874 [Ensete ventricosum]) HSP 1 Score: 58.2 bits (139), Expect = 9.8e-05 Identity = 56/160 (35.00%), Postives = 78/160 (48.75%), Query Frame = 0
BLAST of Lag0015206 vs. ExPASy TrEMBL
Match: A0A5D3DC97 (Transcription factor GTE9 isoform X4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold75860G00060 PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 9.8e-19 Identity = 69/176 (39.20%), Postives = 89/176 (50.57%), Query Frame = 0
BLAST of Lag0015206 vs. ExPASy TrEMBL
Match: A0A0A0KGL2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G421730 PE=4 SV=1) HSP 1 Score: 98.2 bits (243), Expect = 4.1e-17 Identity = 71/187 (37.97%), Postives = 89/187 (47.59%), Query Frame = 0
BLAST of Lag0015206 vs. ExPASy TrEMBL
Match: A0A314YIV3 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_02267 PE=4 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 1.6e-05 Identity = 41/93 (44.09%), Postives = 54/93 (58.06%), Query Frame = 0
BLAST of Lag0015206 vs. ExPASy TrEMBL
Match: A0A444F921 (Bromo domain-containing protein OS=Ensete ventricosum OX=4639 GN=GW17_00016874 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 4.7e-05 Identity = 56/160 (35.00%), Postives = 78/160 (48.75%), Query Frame = 0
BLAST of Lag0015206 vs. ExPASy TrEMBL
Match: A0A314XJ27 (Uncharacterized protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_07298 PE=4 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 6.2e-05 Identity = 40/93 (43.01%), Postives = 51/93 (54.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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