Lag0015175 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCGATCCATTTCGCCCTCTCTCTCCTCACTCTCCTCATTCTCTGCACAGCGGCGGAGCCCCGGCAGCCGTCGATCAGAGACCAGAGCGGCTCGACGGAGCTCTGGTGCGTGGCCAAGAACAACGCCGACGACGCCTCTCTACAATCCGCCCTCGACTGGGCCTGCGGTGCAGGCGGCGCCGACTGTTCCCCAATCCAGCCCGGCGGCGCCTGCTACGACGCCTCCGACGTCCAGAACATGGCCTCCTTCGCCTTCAACGACTACTTCCTCAAACACGGCATGACCGACGACAGTTGCTTCTTCCAAAACTCCGCCGCCATCACCTCCTTAAACCCTAGTCAGTTTCTGCAACTCCGATCTCTCAAATTTCTCCATCCAATCTTTAAATTCTTTCCAGATCTGTAACCGAATCGCTCATTGATTCTGATCTTTCTTGTTTCAGGCTACGGAAATTGCAGGTTCCCATCCAGGTAAGCTTCGTCGACGATCTTTAAAACCCCTGTGTTGGGATTTGGCATTTAGGGCATAATTAATGGCCGTAATCAAGAAATCAATCATCAACCACCACGAATCTGCAACTTCTTTTGCTTTTTTTTTCGGTTTTAATGGAATTGATTTCATTCATTTATGGCGCAGTTTGTTGAGAAATGGAAACTTTTCGAGCCAATCGACGTCGGTAGGGTTGGGGCCGAGTGA ATGCCGATCCATTTCGCCCTCTCTCTCCTCACTCTCCTCATTCTCTGCACAGCGGCGGAGCCCCGGCAGCCGTCGATCAGAGACCAGAGCGGCTCGACGGAGCTCTGGTGCGTGGCCAAGAACAACGCCGACGACGCCTCTCTACAATCCGCCCTCGACTGGGCCTGCGGTGCAGGCGGCGCCGACTGTTCCCCAATCCAGCCCGGCGGCGCCTGCTACGACGCCTCCGACGTCCAGAACATGGCCTCCTTCGCCTTCAACGACTACTTCCTCAAACACGGCATGACCGACGACAGTTGCTTCTTCCAAAACTCCGCCGCCATCACCTCCTTAAACCCTAGTCAGCTACGGAAATTGCAGGTTCCCATCCAGTTTGTTGAGAAATGGAAACTTTTCGAGCCAATCGACGTCGGTAGGGTTGGGGCCGAGTGA ATGCCGATCCATTTCGCCCTCTCTCTCCTCACTCTCCTCATTCTCTGCACAGCGGCGGAGCCCCGGCAGCCGTCGATCAGAGACCAGAGCGGCTCGACGGAGCTCTGGTGCGTGGCCAAGAACAACGCCGACGACGCCTCTCTACAATCCGCCCTCGACTGGGCCTGCGGTGCAGGCGGCGCCGACTGTTCCCCAATCCAGCCCGGCGGCGCCTGCTACGACGCCTCCGACGTCCAGAACATGGCCTCCTTCGCCTTCAACGACTACTTCCTCAAACACGGCATGACCGACGACAGTTGCTTCTTCCAAAACTCCGCCGCCATCACCTCCTTAAACCCTAGTCAGCTACGGAAATTGCAGGTTCCCATCCAGTTTGTTGAGAAATGGAAACTTTTCGAGCCAATCGACGTCGGTAGGGTTGGGGCCGAGTGA MPIHFALSLLTLLILCTAAEPRQPSIRDQSGSTELWCVAKNNADDASLQSALDWACGAGGADCSPIQPGGACYDASDVQNMASFAFNDYFLKHGMTDDSCFFQNSAAITSLNPSQLRKLQVPIQFVEKWKLFEPIDVGRVGAE Homology
BLAST of Lag0015175 vs. NCBI nr
Match: KAA0061642.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5 [Cucumis melo var. makuwa] >TYK05864.1 PLASMODESMATA CALLOSE-BINDING PROTEIN 5 [Cucumis melo var. makuwa]) HSP 1 Score: 251.5 bits (641), Expect = 4.3e-63 Identity = 123/145 (84.83%), Postives = 135/145 (93.10%), Query Frame = 0
BLAST of Lag0015175 vs. NCBI nr
Match: XP_038877601.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like [Benincasa hispida]) HSP 1 Score: 208.8 bits (530), Expect = 3.2e-50 Identity = 102/115 (88.70%), Postives = 109/115 (94.78%), Query Frame = 0
BLAST of Lag0015175 vs. NCBI nr
Match: XP_022989095.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 208.4 bits (529), Expect = 4.2e-50 Identity = 99/114 (86.84%), Postives = 107/114 (93.86%), Query Frame = 0
BLAST of Lag0015175 vs. NCBI nr
Match: XP_022989094.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 208.4 bits (529), Expect = 4.2e-50 Identity = 99/114 (86.84%), Postives = 107/114 (93.86%), Query Frame = 0
BLAST of Lag0015175 vs. NCBI nr
Match: XP_023529866.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X3 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 206.8 bits (525), Expect = 1.2e-49 Identity = 99/114 (86.84%), Postives = 107/114 (93.86%), Query Frame = 0
BLAST of Lag0015175 vs. ExPASy Swiss-Prot
Match: Q9M2K6 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis thaliana OX=3702 GN=PDCB5 PE=2 SV=2) HSP 1 Score: 131.3 bits (329), Expect = 8.5e-30 Identity = 66/116 (56.90%), Postives = 84/116 (72.41%), Query Frame = 0
BLAST of Lag0015175 vs. ExPASy Swiss-Prot
Match: O65399 (Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3) HSP 1 Score: 87.0 bits (214), Expect = 1.8e-16 Identity = 39/83 (46.99%), Postives = 56/83 (67.47%), Query Frame = 0
BLAST of Lag0015175 vs. ExPASy Swiss-Prot
Match: Q94CD8 (Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 PE=2 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 5.9e-15 Identity = 39/82 (47.56%), Postives = 54/82 (65.85%), Query Frame = 0
BLAST of Lag0015175 vs. ExPASy Swiss-Prot
Match: Q9C7U5 (Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g66250 PE=2 SV=2) HSP 1 Score: 80.1 bits (196), Expect = 2.2e-14 Identity = 37/90 (41.11%), Postives = 55/90 (61.11%), Query Frame = 0
BLAST of Lag0015175 vs. ExPASy Swiss-Prot
Match: Q9M069 (Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana OX=3702 GN=At4g34480 PE=1 SV=2) HSP 1 Score: 80.1 bits (196), Expect = 2.2e-14 Identity = 38/79 (48.10%), Postives = 50/79 (63.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|