Lag0015133 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGATCAAACGAGAGGAAGGATCGAGTGGGACTACGAGTCCAGACGAACCTGAGACAGTTGTCGTATTGCCATCGAGACCTGAAGAAGCAAAAGAAGTAATTGGAGGGACGGACGGGAACCATGCGCACGAGAATGAGGGGACTGGCAAGAGGCATGGAGAGGAAACGATAGAGAGCTCTAGACAGCCTGAGAGCCACCATAACTGCATCATTGATATAAAAAGCAATGGTGTGACAGAGGATGATGAAGATTCTAATGAAGAAAATGTTTGCAGGATATGTCATTTGGGCTCTGAACACCAGTCAATAACTTCAGATCTCATACACCTCGGATGTCACTGCAAAGACGAGCTGGGAATTTCCCACCGTGACTGCGCCGAGATTTGGTTTATGCACAGAGGCAACAGGTAAAATTTCTCTGGTCTTCATCCTCTACTCTCTTCACCATTCTGATATCAGTTATGTTGCACTTCTAACTCCAATCCAATTTCATCCCTTTCTAATGATAGACAGTGTGAGATCTGTGGTCAGACTGCAACAAACGTGAGGGGAAACCGGAGTAGCGGTTTCACAATACAGCGGAATGAAAGGAGGTTGGTAGCAAGCTCAACCGTGTCTACAGTGTCCTTGGACAACGATGTTTCATTATCATGTTGCTGGGGGCAGCGCTTCTGTAATTTTCTATTAACATGCACAGTTCTAGCCTTCCTCCTTCCATGGCTTTTTCGTCTAGATTTCTTCGGATGATGAGTGATGGCTTTTCTTGA ATGATCAAACGAGAGGAAGGATCGAGTGGGACTACGAGTCCAGACGAACCTGAGACAGTTGTCGTATTGCCATCGAGACCTGAAGAAGCAAAAGAAGTAATTGGAGGGACGGACGGGAACCATGCGCACGAGAATGAGGGGACTGGCAAGAGGCATGGAGAGGAAACGATAGAGAGCTCTAGACAGCCTGAGAGCCACCATAACTGCATCATTGATATAAAAAGCAATGGTGTGACAGAGGATGATGAAGATTCTAATGAAGAAAATGTTTGCAGGATATGTCATTTGGGCTCTGAACACCAGTCAATAACTTCAGATCTCATACACCTCGGATGTCACTGCAAAGACGAGCTGGGAATTTCCCACCGTGACTGCGCCGAGATTTGGTTTATGCACAGAGGCAACAGACAGTGTGAGATCTGTGGTCAGACTGCAACAAACGTGAGGGGAAACCGGAGTAGCGGTTTCACAATACAGCGGAATGAAAGGAGTTCTAGCCTTCCTCCTTCCATGGCTTTTTCGTCTAGATTTCTTCGGATGATGAGTGATGGCTTTTCTTGA ATGATCAAACGAGAGGAAGGATCGAGTGGGACTACGAGTCCAGACGAACCTGAGACAGTTGTCGTATTGCCATCGAGACCTGAAGAAGCAAAAGAAGTAATTGGAGGGACGGACGGGAACCATGCGCACGAGAATGAGGGGACTGGCAAGAGGCATGGAGAGGAAACGATAGAGAGCTCTAGACAGCCTGAGAGCCACCATAACTGCATCATTGATATAAAAAGCAATGGTGTGACAGAGGATGATGAAGATTCTAATGAAGAAAATGTTTGCAGGATATGTCATTTGGGCTCTGAACACCAGTCAATAACTTCAGATCTCATACACCTCGGATGTCACTGCAAAGACGAGCTGGGAATTTCCCACCGTGACTGCGCCGAGATTTGGTTTATGCACAGAGGCAACAGACAGTGTGAGATCTGTGGTCAGACTGCAACAAACGTGAGGGGAAACCGGAGTAGCGGTTTCACAATACAGCGGAATGAAAGGAGTTCTAGCCTTCCTCCTTCCATGGCTTTTTCGTCTAGATTTCTTCGGATGATGAGTGATGGCTTTTCTTGA MIKREEGSSGTTSPDEPETVVVLPSRPEEAKEVIGGTDGNHAHENEGTGKRHGEETIESSRQPESHHNCIIDIKSNGVTEDDEDSNEENVCRICHLGSEHQSITSDLIHLGCHCKDELGISHRDCAEIWFMHRGNRQCEICGQTATNVRGNRSSGFTIQRNERSSSLPPSMAFSSRFLRMMSDGFS Homology
BLAST of Lag0015133 vs. NCBI nr
Match: XP_038887762.1 (probable E3 ubiquitin ligase SUD1 [Benincasa hispida]) HSP 1 Score: 259.6 bits (662), Expect = 2.0e-65 Identity = 128/163 (78.53%), Postives = 137/163 (84.05%), Query Frame = 0
BLAST of Lag0015133 vs. NCBI nr
Match: XP_008463280.1 (PREDICTED: probable E3 ubiquitin ligase SUD1 [Cucumis melo]) HSP 1 Score: 256.1 bits (653), Expect = 2.3e-64 Identity = 127/163 (77.91%), Postives = 136/163 (83.44%), Query Frame = 0
BLAST of Lag0015133 vs. NCBI nr
Match: XP_011653704.1 (probable E3 ubiquitin ligase SUD1 isoform X1 [Cucumis sativus] >KGN64779.1 hypothetical protein Csa_013679 [Cucumis sativus]) HSP 1 Score: 253.4 bits (646), Expect = 1.5e-63 Identity = 124/163 (76.07%), Postives = 136/163 (83.44%), Query Frame = 0
BLAST of Lag0015133 vs. NCBI nr
Match: XP_022147939.1 (uncharacterized protein LOC111016745 [Momordica charantia]) HSP 1 Score: 235.0 bits (598), Expect = 5.4e-58 Identity = 122/163 (74.85%), Postives = 132/163 (80.98%), Query Frame = 0
BLAST of Lag0015133 vs. NCBI nr
Match: XP_022988953.1 (uncharacterized protein LOC111486158 isoform X1 [Cucurbita maxima]) HSP 1 Score: 232.3 bits (591), Expect = 3.5e-57 Identity = 116/163 (71.17%), Postives = 134/163 (82.21%), Query Frame = 0
BLAST of Lag0015133 vs. ExPASy Swiss-Prot
Match: Q68FA7 (E3 ubiquitin-protein ligase MARCHF3 OS=Xenopus tropicalis OX=8364 GN=marchf3 PE=2 SV=1) HSP 1 Score: 48.5 bits (114), Expect = 9.4e-05 Identity = 21/56 (37.50%), Postives = 26/56 (46.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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