
Lag0015118 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCAGACGTTCTACTAATTTTCCCCCAGGAATTTGGCAGGCTAGAAGGGAATATGATCGCCAGAGATATAACAGAAATGATTCAAACCGTATGAACTCCACACCACCAAACCCTCGTTCATTTCAGGTCAGCAGGTTAACAATTCTTTTGTTTTGTAATGAGCTGTATTCAAACCTGCCATCAAAGCTTAAGCTACTATCCTACAACATGATTAGCAGGCATAAAAACAGAACTTGTAGATTACATTTAAATTCCATGTTAAAAGTTCTCCTAGTTTTTCTCAGAAACATATTAGTAATTGAGAAGTTAAAGAGATGATAACAATCGTATAGCTAGCTCATAATTCATGTGTTGTCAGAATTCTCATAGAGAGATAGATCCAGTTCCATGGCAGCCTGCTGGAGAGATAGATCCAGTTCCGTGGCAGCCTGTTGGGGAGATAGATCCAGTTCCGTGGCGGCCAGCTGAGGGGGCAATGATTACAAGAATATTGGACATCGGCCGGTAAATAAAACATAAGCTCAGTAGTTTTATAGGTGCTGTTTGTTTTGGACTGAATTATATGAAAACCAAAGAAGTCGATATTGCAGATTCATTTCATAAAATGATCTTAAATTATAAGAATTTAGAGGCCAAGCAAAGTTTGCGGTATATTGCCTGAACTAGTATCTAACTCAAGAAGATAACTTGACAGAGCAGTCAGAACTCCATGAATTTCACTAATGGAAGAACTTGAGGAAACAAATCATGCAAATCATGAAGTGTCAGAAATGGGGTTGAGCTTCAGGTTCCTTCTTAGTTGGAGACTAGTTCGTTGAAGATTCTTTTACACAAGGGAGTTCAACAGCATTCAACACCACACAACGTATTAAGCATAAATTTGCTCACTAATAATCTCTATTTACAAGTTGCAGGGAAAAAGAAACATGTTATTCTCATTCATTTAATTGAATTGCTTATGATCAATAGCTTTCAATTTATGTCATTAGCAGGATCCAATTTTGCAATAACAGACTAATCCCTTTTGAAAATATCAGTTCGTTTTAGAGATGATCTACTTACATTGCTCTTATTACCTGCAATTAAAATCCGTATCCTCGGTACTGTGTTGATATTCATTCACTTTTTGAGATATTTCCAGCCCGCCGGAAGAACCAACTGCCATAGTCAGAATCATTACCCAATCCAGACCGAGGCAGCTCGAAGCCAGTCCAAGACTTGCGGAACTGCACTCGCCAACTCCAAGATCTCGAGGAAACTCCACGCTAACACCTGAAGAGCAAAATATGGCACTGAATAAGCTCAACAAAAAAGTCTATGACCCTCCGAATAACTCAAGTAGGAAAATAAGCTTCTATTACAGAGAGAATAACAGAAGAAATTACAACGAGAGGAGCAACGGCAACAACGATGAAGAAGGCAAGAGATGCGCCGTTTGCCTTGAAGATTTCCAGCCAAAAGAGGAAGTGATGACGACGCCCTGCAACCATATGTTTCACGAAGAATGCATAGTGCCATGGGTGAAGAGCAATGGCCAATGTCCAGTCTGCAGATTCGCCTTGTTCGAACGAACAGAGCGAAGAGAAGCTTCGTCCAATAATACTGTCTCAATTGCGCCGGCGAGAAGCCTGATCGACGACGAGCTTGTGTACTTGATACGAGCCATGGAAGATGCTCTGATGCTGCGAAATCTGGCCGGATTTTGGGGACCATGA ATGAGCAGACGTTCTACTAATTTTCCCCCAGGAATTTGGCAGGCTAGAAGGGAATATGATCGCCAGAGATATAACAGAAATGATTCAAACCGTATGAACTCCACACCACCAAACCCTCGTTCATTTCAGAATTCTCATAGAGAGATAGATCCAGTTCCATGGCAGCCTGCTGGAGAGATAGATCCAGTTCCGTGGCAGCCTGTTGGGGAGATAGATCCAGTTCCGTGGCGGCCAGCTGAGGGGGCAATGATTACAAGAATATTGGACATCGGCCGCCCGCCGGAAGAACCAACTGCCATAGTCAGAATCATTACCCAATCCAGACCGAGGCAGCTCGAAGCCAGTCCAAGACTTGCGGAACTGCACTCGCCAACTCCAAGATCTCGAGGAAACTCCACGCTAACACCTGAAGAGCAAAATATGGCACTGAATAAGCTCAACAAAAAAGTCTATGACCCTCCGAATAACTCAAGTAGGAAAATAAGCTTCTATTACAGAGAGAATAACAGAAGAAATTACAACGAGAGGAGCAACGGCAACAACGATGAAGAAGGCAAGAGATGCGCCGTTTGCCTTGAAGATTTCCAGCCAAAAGAGGAAGTGATGACGACGCCCTGCAACCATATGTTTCACGAAGAATGCATAGTGCCATGGGTGAAGAGCAATGGCCAATGTCCAGTCTGCAGATTCGCCTTGTTCGAACGAACAGAGCGAAGAGAAGCTTCGTCCAATAATACTGTCTCAATTGCGCCGGCGAGAAGCCTGATCGACGACGAGCTTGTGTACTTGATACGAGCCATGGAAGATGCTCTGATGCTGCGAAATCTGGCCGGATTTTGGGGACCATGA ATGAGCAGACGTTCTACTAATTTTCCCCCAGGAATTTGGCAGGCTAGAAGGGAATATGATCGCCAGAGATATAACAGAAATGATTCAAACCGTATGAACTCCACACCACCAAACCCTCGTTCATTTCAGAATTCTCATAGAGAGATAGATCCAGTTCCATGGCAGCCTGCTGGAGAGATAGATCCAGTTCCGTGGCAGCCTGTTGGGGAGATAGATCCAGTTCCGTGGCGGCCAGCTGAGGGGGCAATGATTACAAGAATATTGGACATCGGCCGCCCGCCGGAAGAACCAACTGCCATAGTCAGAATCATTACCCAATCCAGACCGAGGCAGCTCGAAGCCAGTCCAAGACTTGCGGAACTGCACTCGCCAACTCCAAGATCTCGAGGAAACTCCACGCTAACACCTGAAGAGCAAAATATGGCACTGAATAAGCTCAACAAAAAAGTCTATGACCCTCCGAATAACTCAAGTAGGAAAATAAGCTTCTATTACAGAGAGAATAACAGAAGAAATTACAACGAGAGGAGCAACGGCAACAACGATGAAGAAGGCAAGAGATGCGCCGTTTGCCTTGAAGATTTCCAGCCAAAAGAGGAAGTGATGACGACGCCCTGCAACCATATGTTTCACGAAGAATGCATAGTGCCATGGGTGAAGAGCAATGGCCAATGTCCAGTCTGCAGATTCGCCTTGTTCGAACGAACAGAGCGAAGAGAAGCTTCGTCCAATAATACTGTCTCAATTGCGCCGGCGAGAAGCCTGATCGACGACGAGCTTGTGTACTTGATACGAGCCATGGAAGATGCTCTGATGCTGCGAAATCTGGCCGGATTTTGGGGACCATGA MSRRSTNFPPGIWQARREYDRQRYNRNDSNRMNSTPPNPRSFQNSHREIDPVPWQPAGEIDPVPWQPVGEIDPVPWRPAEGAMITRILDIGRPPEEPTAIVRIITQSRPRQLEASPRLAELHSPTPRSRGNSTLTPEEQNMALNKLNKKVYDPPNNSSRKISFYYRENNRRNYNERSNGNNDEEGKRCAVCLEDFQPKEEVMTTPCNHMFHEECIVPWVKSNGQCPVCRFALFERTERREASSNNTVSIAPARSLIDDELVYLIRAMEDALMLRNLAGFWGP Homology
BLAST of Lag0015118 vs. NCBI nr
Match: XP_023529368.1 (E3 ubiquitin-protein ligase EL5 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 450.3 bits (1157), Expect = 1.2e-122 Identity = 218/281 (77.58%), Postives = 244/281 (86.83%), Query Frame = 0
BLAST of Lag0015118 vs. NCBI nr
Match: XP_022989128.1 (E3 ubiquitin-protein ligase EL5 [Cucurbita maxima]) HSP 1 Score: 449.1 bits (1154), Expect = 2.8e-122 Identity = 219/281 (77.94%), Postives = 243/281 (86.48%), Query Frame = 0
BLAST of Lag0015118 vs. NCBI nr
Match: XP_022930836.1 (E3 ubiquitin-protein ligase EL5 [Cucurbita moschata] >KAG7022947.1 E3 ubiquitin-protein ligase SDIR1 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 448.0 bits (1151), Expect = 6.1e-122 Identity = 218/281 (77.58%), Postives = 242/281 (86.12%), Query Frame = 0
BLAST of Lag0015118 vs. NCBI nr
Match: XP_038888228.1 (uncharacterized protein LOC120078088 isoform X1 [Benincasa hispida]) HSP 1 Score: 437.6 bits (1124), Expect = 8.3e-119 Identity = 224/283 (79.15%), Postives = 237/283 (83.75%), Query Frame = 0
BLAST of Lag0015118 vs. NCBI nr
Match: XP_008455285.1 (PREDICTED: E3 ubiquitin-protein ligase RNF12 isoform X1 [Cucumis melo]) HSP 1 Score: 423.7 bits (1088), Expect = 1.2e-114 Identity = 219/284 (77.11%), Postives = 237/284 (83.45%), Query Frame = 0
BLAST of Lag0015118 vs. ExPASy Swiss-Prot
Match: Q940T5 (E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis thaliana OX=3702 GN=DURF2 PE=1 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 2.7e-11 Identity = 29/58 (50.00%), Postives = 36/58 (62.07%), Query Frame = 0
BLAST of Lag0015118 vs. ExPASy Swiss-Prot
Match: Q9Y4L5 (E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens OX=9606 GN=RNF115 PE=1 SV=2) HSP 1 Score: 70.9 bits (172), Expect = 2.7e-11 Identity = 31/69 (44.93%), Postives = 42/69 (60.87%), Query Frame = 0
BLAST of Lag0015118 vs. ExPASy Swiss-Prot
Match: Q9D0C1 (E3 ubiquitin-protein ligase RNF115 OS=Mus musculus OX=10090 GN=Rnf115 PE=1 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 2.7e-11 Identity = 31/69 (44.93%), Postives = 42/69 (60.87%), Query Frame = 0
BLAST of Lag0015118 vs. ExPASy Swiss-Prot
Match: Q9C1X4 (Uncharacterized RING finger protein P32A8.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAP32A8.03c PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 1.0e-10 Identity = 26/67 (38.81%), Postives = 44/67 (65.67%), Query Frame = 0
BLAST of Lag0015118 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 2.3e-10 Identity = 22/49 (44.90%), Postives = 36/49 (73.47%), Query Frame = 0
BLAST of Lag0015118 vs. ExPASy TrEMBL
Match: A0A6J1JPC8 (E3 ubiquitin-protein ligase EL5 OS=Cucurbita maxima OX=3661 GN=LOC111486293 PE=4 SV=1) HSP 1 Score: 449.1 bits (1154), Expect = 1.3e-122 Identity = 219/281 (77.94%), Postives = 243/281 (86.48%), Query Frame = 0
BLAST of Lag0015118 vs. ExPASy TrEMBL
Match: A0A6J1ES11 (E3 ubiquitin-protein ligase EL5 OS=Cucurbita moschata OX=3662 GN=LOC111437204 PE=4 SV=1) HSP 1 Score: 448.0 bits (1151), Expect = 3.0e-122 Identity = 218/281 (77.58%), Postives = 242/281 (86.12%), Query Frame = 0
BLAST of Lag0015118 vs. ExPASy TrEMBL
Match: A0A1S3C054 (E3 ubiquitin-protein ligase RNF12 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495488 PE=4 SV=1) HSP 1 Score: 423.7 bits (1088), Expect = 6.0e-115 Identity = 219/284 (77.11%), Postives = 237/284 (83.45%), Query Frame = 0
BLAST of Lag0015118 vs. ExPASy TrEMBL
Match: A0A5D3C526 (E3 ubiquitin-protein ligase RNF12 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G003170 PE=4 SV=1) HSP 1 Score: 421.4 bits (1082), Expect = 3.0e-114 Identity = 218/283 (77.03%), Postives = 237/283 (83.75%), Query Frame = 0
BLAST of Lag0015118 vs. ExPASy TrEMBL
Match: A0A0A0K1V1 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G049220 PE=4 SV=1) HSP 1 Score: 419.5 bits (1077), Expect = 1.1e-113 Identity = 215/284 (75.70%), Postives = 236/284 (83.10%), Query Frame = 0
BLAST of Lag0015118 vs. TAIR 10
Match: AT3G58720.1 (RING/U-box superfamily protein ) HSP 1 Score: 130.2 bits (326), Expect = 2.6e-30 Identity = 73/182 (40.11%), Postives = 103/182 (56.59%), Query Frame = 0
BLAST of Lag0015118 vs. TAIR 10
Match: AT3G58720.2 (RING/U-box superfamily protein ) HSP 1 Score: 130.2 bits (326), Expect = 2.6e-30 Identity = 73/182 (40.11%), Postives = 103/182 (56.59%), Query Frame = 0
BLAST of Lag0015118 vs. TAIR 10
Match: AT5G59550.1 (zinc finger (C3HC4-type RING finger) family protein ) HSP 1 Score: 70.9 bits (172), Expect = 1.9e-12 Identity = 29/58 (50.00%), Postives = 36/58 (62.07%), Query Frame = 0
BLAST of Lag0015118 vs. TAIR 10
Match: AT2G44330.1 (RING/U-box superfamily protein ) HSP 1 Score: 67.8 bits (164), Expect = 1.6e-11 Identity = 24/56 (42.86%), Postives = 36/56 (64.29%), Query Frame = 0
BLAST of Lag0015118 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein ) HSP 1 Score: 67.8 bits (164), Expect = 1.6e-11 Identity = 22/49 (44.90%), Postives = 36/49 (73.47%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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