Lag0014797 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0014797
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRetrotransposon gag protein
Locationchr12: 4734277 .. 4736947 (-)
RNA-Seq ExpressionLag0014797
SyntenyLag0014797
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGCATGGCCGCGACAAAAGAAGAAAATCAATGTTCAACGTCCACCTTCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCAACCTTCGACATCTGTTTTTGATCGCCTCAAAGTAACAAGCGATCAACCTAAAAGAAAGATGGATAACTTGGAGGTGAAACTTTTCGATGAAGTAAACAGCGACAAGAAGCTTCAAAGTAGCATCCTGTCACGTATGAAGAGGAAGTTCTCTGTTCTCATAAATACAGAAGGTTCCTTGAAGGTGAAACCAAATCTCATTATCTTGACCAATCCTACAAGTCAAGGACCTGATCAAGACCATGATAAGATAAGAGCTTTTAAAATGTAAAAGCTCCTTATCGCAAGAGCCTAAACTGCATGATGCTCATAGCCCACACGAGCTTAAAAGGTGAGAGCAAAAAAAAAAAAAAAAAATCTTGAACTACGTTATGACTTGATCCCTATTCCATAAGGGTACGTAGGCAGCTTAAAGAAAACTTTAAGTTCAGTCTCTATAAAAAAAAAAGGTTCTTCGTTGCAGTTCCTTCTCTCCAAGTTCGAGGGTCCTTACACTGTACGCTATTGCGTTGTTCCTTCTCCAAGTTCGAAGGTTCTTCGTTGTATCCTGTTGCGTTGTTCATTCTCCAAGTTCGAGGTTCTCAGTTGTACAACTGCTACGTTGTTCCTCCTCCAAGTGCGAAGGATCTTATGTGGTGCGTTGTTGCATTGTTCCCTCTTCTCTCAAGTTCGATGGTTCTCACGCAACTTTGCTGGAGTTTCTTCTCCCCAAGTTCGAAGGTTCTCACGCGCTCCGTTGCAGTTCCTTCTTTCCAAGGTCGAAGGTTCTCACTCGCTGCGTTGAAGTTCTTTCTCCCCAAGTTCGAAGGTTCACGCACTTCGCTGTTCCCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCACACGCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAATCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCATCGCCACAGTTCTTTCCTCCAAGTTCGAAGGTTCTCACGCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCATCGCCGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGTGTTTCACTGCAGTTCTTTCCTCACAGTTCGAAGGTTCTCATGCGCTTCGCTGCAGTTCCTTCTTCCAAGTTTGAAGGTTCTCACATCGCTTCGCTGCGATCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTCATTCCCCAAGTTCGAAGGTTCTCATGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCGCTTCGTTGCATTTCCTTCCCCCAAATTCGAAGGTTCTCACGTGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTCCTTCCCCAAGTTAGAAGGTTCTCACGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGATTCTCACGCGCTTCGTTGCATTTCCTTCCCCCCAAGTTCGAAGGTTCTCACGTGTTTCGCTGCATTTCCTTCCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGCTACAGTTCCTTCCTCCAAGTTCAAAGGTTATCACGTCGCTTCGCTGCGCTCATGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACATCGCTTCGCTGCGATCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTCCTTCCCCAAGTTCGAAGGTTCTCATGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCGTTTCGTTGCATTTCCTTCCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGCACTTCGCTGCAGTTCCTTCCTCCAAGTTCAAAGGTTCTCACGCGCTTCGCTGCACTCCAGCGCTACTTCCTAAAGTCCAAAGACGTCAATTGTCCTCACGCTGCGCTGCTTCCTTCTCCAAGTTCGAGGGTCCTCATGCTACGCTCGGCTACATTGCTGCTCTACTTCCTAAAGTCCAAAGACGTCAATTGTCCCTGCACTCATGCTGAAAAGGGCATGGCGGCGACACAAGTCCAAGGACATGTCCCAAAGCGAGGAACATGTCCTTGTACTCGTGCTGAAAGGCGCGGCGGCGGCACAAGTCCAAGGAACATGTCCCAACTCAAGGAACATGTCCGTGCACTCGTGCTGAAAGGCGTGGCGGCGGCACAAGTCCAAGGAACATGTCCCAACTCAAGGAACACGTCCTTGCACTCGTGCTGA

mRNA sequence

ATGAGCATGGCCGCGACAAAAGAAGAAAATCAATGTTCAACGTCCACCTTCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCAACCTTCGACATCTGTTTTTGATCGCCTCAAAGTAACAAGCGATCAACCTAAAAGAAAGATGGATAACTTGGAGGTGAAACTTTTCGATGAAGTAAACAGCGACAAGAAGCTTCAAAGTAGCATCCTGTCACGTATGAAGAGGAAGTTCTCTGTTCTCATAAATACAGAAGGTTCCTTGAAGGTGAAACCAAATCTCATTATCTTGACCAATCCTACAAGTCAAGGACCTGATCAAGACCATGATAAGATAAGAGCTTTTAAAATTTCCTTCTCTCCAAGTTCGAGGGTCCTTACACTGTACGCTATTGCGTTGTTCCTTCTCCAAGTTCGAAGGTTCTTCGTTGTATCCTGTTGCGTTGTTCATTCTCCAAGTTCGAGGTTCTCAGTTGTACAACTGCTACGTTGTTCCTCCTCCAAGTGCGAAGGATCTTATGTGGTGCGTTGTTGCATTGTTCCCTCTTCTCTCAAGTTCGATGGTTCTCACGCAACTTTGCTGGAGTTTCTTCTCCCCAAGTTCGAAGGTTCTCACGCGCTCCGTTGCAGTTCCTTCTTTCCAAGGTCGAAGGTTCTCACTCGCTGCGTTGAAGTTCTTTCTCCCCAAGTTCGAAGGTTCACGCACTTCGCTGTTCCCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCACACGCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAATCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCATCGCCACAGTTCTTTCCTCCAAGTTCGAAGGTTCTCACGCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCATCGCCGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGTGTTTCACTGCAGTTCTTTCCTCACAGTTCGAAGGTTCTCATGCGCTTCGCTGCAGTTCCTTCTTCCAAGTTTGAAGGTTCTCACATCGCTTCGCTGCGATCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTCATTCCCCAAGTTCGAAGGTTCTCATGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCGCTTCGTTGCATTTCCTTCCCCCAAATTCGAAGGTTCTCACGTGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTCCTTCCCCAAGTTAGAAGGTTCTCACGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGATTCTCACGCGCTTCGTTGCATTTCCTTCCCCCCAAGTTCGAAGGTTCTCACGTGTTTCGCTGCATTTCCTTCCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGCTACAGTTCCTTCCTCCAAGTTCAAAGGTTATCACGTCGCTTCGCTGCGCTCATGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACATCGCTTCGCTGCGATCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTCCTTCCCCAAGTTCGAAGGTTCTCATGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCGTTTCGTTGCATTTCCTTCCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGCACTTCGCTGCAGTTCCTTCCTCCAAGTTCAAAGGTTCTCACGCGCTTCGCTGCACTCCAGCGCTACTTCCTAAAGTCCAAAGACGTCAATTGTCCTCACGCTGCGCTGCTTCCTTCTCCAAGTTCGAGGGTCCTCATGCTACGCTCGGCTACATTGCTGCTCTACTTCCTAAAGTCCAAAGACGTCAATTGTCCCTGCACTCATGCTGAAAAGGGCATGGCGGCGACACAAGTCCAAGGACATGTCCCAAAGCGAGGAACATGTCCTTGTACTCGTGCTGAAAGGCGCGGCGGCGGCACAAGTCCAAGGAACATGTCCCAACTCAAGGAACATGTCCGTGCACTCGTGCTGAAAGGCGTGGCGGCGGCACAAGTCCAAGGAACATGTCCCAACTCAAGGAACACGTCCTTGCACTCGTGCTGA

Coding sequence (CDS)

ATGAGCATGGCCGCGACAAAAGAAGAAAATCAATGTTCAACGTCCACCTTCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATCGAAGAAAAGTCAACCTTCGACATCTGTTTTTGATCGCCTCAAAGTAACAAGCGATCAACCTAAAAGAAAGATGGATAACTTGGAGGTGAAACTTTTCGATGAAGTAAACAGCGACAAGAAGCTTCAAAGTAGCATCCTGTCACGTATGAAGAGGAAGTTCTCTGTTCTCATAAATACAGAAGGTTCCTTGAAGGTGAAACCAAATCTCATTATCTTGACCAATCCTACAAGTCAAGGACCTGATCAAGACCATGATAAGATAAGAGCTTTTAAAATTTCCTTCTCTCCAAGTTCGAGGGTCCTTACACTGTACGCTATTGCGTTGTTCCTTCTCCAAGTTCGAAGGTTCTTCGTTGTATCCTGTTGCGTTGTTCATTCTCCAAGTTCGAGGTTCTCAGTTGTACAACTGCTACGTTGTTCCTCCTCCAAGTGCGAAGGATCTTATGTGGTGCGTTGTTGCATTGTTCCCTCTTCTCTCAAGTTCGATGGTTCTCACGCAACTTTGCTGGAGTTTCTTCTCCCCAAGTTCGAAGGTTCTCACGCGCTCCGTTGCAGTTCCTTCTTTCCAAGGTCGAAGGTTCTCACTCGCTGCGTTGAAGTTCTTTCTCCCCAAGTTCGAAGGTTCACGCACTTCGCTGTTCCCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCACACGCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAATCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCATCGCCACAGTTCTTTCCTCCAAGTTCGAAGGTTCTCACGCGCATCGCCACAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCATCGCCGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGTGTTTCACTGCAGTTCTTTCCTCACAGTTCGAAGGTTCTCATGCGCTTCGCTGCAGTTCCTTCTTCCAAGTTTGAAGGTTCTCACATCGCTTCGCTGCGATCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTCATTCCCCAAGTTCGAAGGTTCTCATGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCGCTTCGTTGCATTTCCTTCCCCCAAATTCGAAGGTTCTCACGTGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTCCTTCCCCAAGTTAGAAGGTTCTCACGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGATTCTCACGCGCTTCGTTGCATTTCCTTCCCCCCAAGTTCGAAGGTTCTCACGTGTTTCGCTGCATTTCCTTCCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGCTACAGTTCCTTCCTCCAAGTTCAAAGGTTATCACGTCGCTTCGCTGCGCTCATGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACATCGCTTCGCTGCGATCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTCCTTCCCCAAGTTCGAAGGTTCTCATGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCGTTTCGTTGCATTTCCTTCCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGCACTTCGCTGCAGTTCCTTCCTCCAAGTTCAAAGGTTCTCACGCGCTTCGCTGCACTCCAGCGCTACTTCCTAAAGTCCAAAGACGTCAATTGTCCTCACGCTGCGCTGCTTCCTTCTCCAAGTTCGAGGGTCCTCATGCTACGCTCGGCTACATTGCTGCTCTACTTCCTAAAGTCCAAAGACGTCAATTGTCCCTGCACTCATGCTGAAAAGGGCATGGCGGCGACACAAGTCCAAGGACATGTCCCAAAGCGAGGAACATGTCCTTGTACTCGTGCTGAAAGGCGCGGCGGCGGCACAAGTCCAAGGAACATGTCCCAACTCAAGGAACATGTCCGTGCACTCGTGCTGAAAGGCGTGGCGGCGGCACAAGTCCAAGGAACATGTCCCAACTCAAGGAACACGTCCTTGCACTCGTGCTGA

Protein sequence

MSMAATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEVKLFDEVNSDKKLQSSILSRMKRKFSVLINTEGSLKVKPNLIILTNPTSQGPDQDHDKIRAFKISFSPSSRVLTLYAIALFLLQVRRFFVVSCCVVHSPSSRFSVVQLLRCSSSKCEGSYVVRCCIVPSSLKFDGSHATLLEFLLPKFEGSHALRCSSFFPRSKVLTRCVEVLSPQVRRFTHFAVPLPPSSKVLTRIATVPSSKFEGSHAHRHSSFLQVRRFSRASPQFLPPSSNPSSKFEGSHAHRHSSFLQVRRFSRASPQFLPPSSKVLTRIAAVPSSKFEGSHVFHCSSFLTVRRFSCASLQFLLPSLKVLTSLRCDPSSKFEGSHALRSAIHSPSSKVLMRFVQFLPPNSKVLTRFVAFPSPKFEGSHVLRCSSFLQVRRFSRASLCNSFPKLEGSHALRAVPSSKFEDSHALRCISFPPSSKVLTCFAAFPSPQIRRFSRASLQFLPPSSKVLTRFATVPSSKFKGYHVASLRSCASLQFLPPSLKVLTSLRCDPSSKFEGSHALRSAIPSPSSKVLMRFVQFLPPNSKVLTRFVAFPSPQIRRFSRASLQFLPPSSKVLTRFALQFLPPSSKVLTRFVQFLPPNSKVLTRFVAVPSPKFEGSHALRCSSFPQVRRFSRTSLQFLPPSSKVLTRFAALQRYFLKSKDVNCPHAALLPSPSSRVLMLRSATLLLYFLKSKDVNCPCTHAEKGMAATQVQGHVPKRGTCPCTRAERRGGGTSPRNMSQLKEHVRALVLKGVAAAQVQGTCPNSRNTSLHSC
Homology
[Close]
BLAST of Lag0014797 vs. NCBI nr
Match: KAA0044978.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 129.4 bits (324), Expect = 1.4e-25
Identity = 70/117 (59.83%), Postives = 89/117 (76.07%), Query Frame = 0 

Query: 1   MSMAATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEV 60
           +SMA  +EENQC TST+ R SAF+RLS+STSKK +PSTS FDRLK+T+DQ +R+M +L+ 
Sbjct: 151 LSMATKEEENQCPTSTYARTSAFKRLSISTSKKHRPSTSAFDRLKMTNDQQQREMKSLKA 210

Query: 61  KLFDEVNSDKKLQSSILSRMKRKFSVLINTEGSLKVKPNLIILTNPTSQGPDQDHDK 118
           K F E N D K+ S + SRMKRK SV INTEGSL VKP  II TNP ++G ++  D+
Sbjct: 211 KPFHEENDDDKIHSRVPSRMKRKLSVDINTEGSLTVKPRFIIFTNPINEGDEKILDE 267

[Close]
BLAST of Lag0014797 vs. NCBI nr
Match: KAA0025725.1 (retrotransposon gag protein [Cucumis melo var. makuwa])

HSP 1 Score: 129.0 bits (323), Expect = 1.8e-25
Identity = 69/110 (62.73%), Postives = 86/110 (78.18%), Query Frame = 0 

Query: 1   MSMAATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEV 60
           +SMA  +EENQC TST+ R SAF+RLS+STSKK +PSTS FDRLK+T+DQ +R+M +L+ 
Sbjct: 151 LSMATKEEENQCPTSTYARTSAFKRLSISTSKKHRPSTSAFDRLKMTNDQQQREMKSLKA 210

Query: 61  KLFDEVNSDKKLQSSILSRMKRKFSVLINTEGSLKVKPNLIILTNPTSQG 111
           K F E N D K++S + SRMKRK SV INTEGSL VKP  II TNP ++G
Sbjct: 211 KPFHEENDDDKIRSRVSSRMKRKLSVGINTEGSLTVKPRFIIFTNPINEG 260

[Close]
BLAST of Lag0014797 vs. NCBI nr
Match: TYK18884.1 (gag protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 128.3 bits (321), Expect = 3.1e-25
Identity = 69/117 (58.97%), Postives = 90/117 (76.92%), Query Frame = 0 

Query: 1   MSMAATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEV 60
           +SMA  +EENQC TST+ R SAF+RLS+STSKK +PSTS FDRLK+T+DQ +R+M +L+ 
Sbjct: 92  LSMATKEEENQCPTSTYARTSAFKRLSISTSKKHRPSTSTFDRLKMTNDQQQREMKSLKA 151

Query: 61  KLFDEVNSDKKLQSSILSRMKRKFSVLINTEGSLKVKPNLIILTNPTSQGPDQDHDK 118
           K F E N D K+ S + SRMKRK S+ INT+GSL VKP LII TNP ++G ++  D+
Sbjct: 152 KPFHEENDDDKIHSRVPSRMKRKLSIDINTKGSLIVKPRLIIFTNPINEGDEKILDE 208

[Close]
BLAST of Lag0014797 vs. NCBI nr
Match: KAA0050734.1 (gag protease polyprotein [Cucumis melo var. makuwa] >TYJ95698.1 gag protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 128.3 bits (321), Expect = 3.1e-25
Identity = 69/110 (62.73%), Postives = 85/110 (77.27%), Query Frame = 0 

Query: 1   MSMAATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEV 60
           +SMA  +EENQC TST+ R SAF+RLS+STSKK +PSTS FDRLK+T+DQ +R+M +L+ 
Sbjct: 92  LSMATKEEENQCPTSTYARTSAFKRLSISTSKKHRPSTSAFDRLKMTNDQQQREMKSLKA 151

Query: 61  KLFDEVNSDKKLQSSILSRMKRKFSVLINTEGSLKVKPNLIILTNPTSQG 111
           K F E N D K+ S + SRMKRK SV INTEGSL VKP  II TNP ++G
Sbjct: 152 KPFHEENGDDKIHSRVPSRMKRKLSVDINTEGSLTVKPRFIIFTNPINEG 201

[Close]
BLAST of Lag0014797 vs. NCBI nr
Match: KAA0063700.1 (ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 127.9 bits (320), Expect = 4.1e-25
Identity = 71/129 (55.04%), Postives = 94/129 (72.87%), Query Frame = 0 

Query: 1   MSMAATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEV 60
           +S A  +EENQC TST+TR SAF+RLS+STSKK++PST  FDR+K+T+ Q +R+M +L+ 
Sbjct: 285 LSKATREEENQCPTSTYTRTSAFKRLSISTSKKARPSTFAFDRVKMTNYQQQREMKSLKA 344

Query: 61  KLFDEVNSDKKLQSSILSRMKRKFSVLINTEGSLKVKPNLIILTNPTSQGPDQ---DHDK 120
           KLF E N D  + S + SRMKRK S+ INTEGSL VKP  II TNPT++G +Q   +++ 
Sbjct: 345 KLFHEENDDNTIHSCVPSRMKRKLSIDINTEGSLTVKPRFIIFTNPTNEGDEQILDENET 404

Query: 121 IRAFKISFS 127
            R F   FS
Sbjct: 405 ERIFIFIFS 413

[Close]
BLAST of Lag0014797 vs. ExPASy TrEMBL
Match: A0A5A7TQ06 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold74G002860 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 6.8e-26
Identity = 70/117 (59.83%), Postives = 89/117 (76.07%), Query Frame = 0 

Query: 1   MSMAATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEV 60
           +SMA  +EENQC TST+ R SAF+RLS+STSKK +PSTS FDRLK+T+DQ +R+M +L+ 
Sbjct: 151 LSMATKEEENQCPTSTYARTSAFKRLSISTSKKHRPSTSAFDRLKMTNDQQQREMKSLKA 210

Query: 61  KLFDEVNSDKKLQSSILSRMKRKFSVLINTEGSLKVKPNLIILTNPTSQGPDQDHDK 118
           K F E N D K+ S + SRMKRK SV INTEGSL VKP  II TNP ++G ++  D+
Sbjct: 211 KPFHEENDDDKIHSRVPSRMKRKLSVDINTEGSLTVKPRFIIFTNPINEGDEKILDE 267

[Close]
BLAST of Lag0014797 vs. ExPASy TrEMBL
Match: A0A5A7SMQ5 (Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold653G00040 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 8.9e-26
Identity = 69/110 (62.73%), Postives = 86/110 (78.18%), Query Frame = 0 

Query: 1   MSMAATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEV 60
           +SMA  +EENQC TST+ R SAF+RLS+STSKK +PSTS FDRLK+T+DQ +R+M +L+ 
Sbjct: 151 LSMATKEEENQCPTSTYARTSAFKRLSISTSKKHRPSTSAFDRLKMTNDQQQREMKSLKA 210

Query: 61  KLFDEVNSDKKLQSSILSRMKRKFSVLINTEGSLKVKPNLIILTNPTSQG 111
           K F E N D K++S + SRMKRK SV INTEGSL VKP  II TNP ++G
Sbjct: 211 KPFHEENDDDKIRSRVSSRMKRKLSVGINTEGSLTVKPRFIIFTNPINEG 260

[Close]
BLAST of Lag0014797 vs. ExPASy TrEMBL
Match: A0A5D3BBF9 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold726G00250 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.5e-25
Identity = 69/110 (62.73%), Postives = 85/110 (77.27%), Query Frame = 0 

Query: 1   MSMAATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEV 60
           +SMA  +EENQC TST+ R SAF+RLS+STSKK +PSTS FDRLK+T+DQ +R+M +L+ 
Sbjct: 92  LSMATKEEENQCPTSTYARTSAFKRLSISTSKKHRPSTSAFDRLKMTNDQQQREMKSLKA 151

Query: 61  KLFDEVNSDKKLQSSILSRMKRKFSVLINTEGSLKVKPNLIILTNPTSQG 111
           K F E N D K+ S + SRMKRK SV INTEGSL VKP  II TNP ++G
Sbjct: 152 KPFHEENGDDKIHSRVPSRMKRKLSVDINTEGSLTVKPRFIIFTNPINEG 201

[Close]
BLAST of Lag0014797 vs. ExPASy TrEMBL
Match: A0A5D3D5Q0 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold204G00920 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.5e-25
Identity = 69/117 (58.97%), Postives = 90/117 (76.92%), Query Frame = 0 

Query: 1   MSMAATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEV 60
           +SMA  +EENQC TST+ R SAF+RLS+STSKK +PSTS FDRLK+T+DQ +R+M +L+ 
Sbjct: 92  LSMATKEEENQCPTSTYARTSAFKRLSISTSKKHRPSTSTFDRLKMTNDQQQREMKSLKA 151

Query: 61  KLFDEVNSDKKLQSSILSRMKRKFSVLINTEGSLKVKPNLIILTNPTSQGPDQDHDK 118
           K F E N D K+ S + SRMKRK S+ INT+GSL VKP LII TNP ++G ++  D+
Sbjct: 152 KPFHEENDDDKIHSRVPSRMKRKLSIDINTKGSLIVKPRLIIFTNPINEGDEKILDE 208

[Close]
BLAST of Lag0014797 vs. ExPASy TrEMBL
Match: A0A5A7V935 (Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold329G002200 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 2.0e-25
Identity = 71/129 (55.04%), Postives = 94/129 (72.87%), Query Frame = 0 

Query: 1   MSMAATKEENQCSTSTFTRPSAFQRLSVSTSKKSQPSTSVFDRLKVTSDQPKRKMDNLEV 60
           +S A  +EENQC TST+TR SAF+RLS+STSKK++PST  FDR+K+T+ Q +R+M +L+ 
Sbjct: 285 LSKATREEENQCPTSTYTRTSAFKRLSISTSKKARPSTFAFDRVKMTNYQQQREMKSLKA 344

Query: 61  KLFDEVNSDKKLQSSILSRMKRKFSVLINTEGSLKVKPNLIILTNPTSQGPDQ---DHDK 120
           KLF E N D  + S + SRMKRK S+ INTEGSL VKP  II TNPT++G +Q   +++ 
Sbjct: 345 KLFHEENDDNTIHSCVPSRMKRKLSIDINTEGSLTVKPRFIIFTNPTNEGDEQILDENET 404

Query: 121 IRAFKISFS 127
            R F   FS
Sbjct: 405 ERIFIFIFS 413

The following BLAST results are available for this feature:
BLAST of Lag0014797 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0044978.11.4e-2559.83retrotransposon gag protein [Cucumis melo var. makuwa][more]
KAA0025725.11.8e-2562.73retrotransposon gag protein [Cucumis melo var. makuwa][more]
TYK18884.13.1e-2558.97gag protease polyprotein [Cucumis melo var. makuwa][more]
KAA0050734.13.1e-2562.73gag protease polyprotein [Cucumis melo var. makuwa] >TYJ95698.1 gag protease pol... [more]
KAA0063700.14.1e-2555.04ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa][more]
BLAST of Lag0014797 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Lag0014797 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7TQ066.8e-2659.83Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf... [more]
A0A5A7SMQ58.9e-2662.73Retrotransposon gag protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaf... [more]
A0A5D3BBF91.5e-2562.73Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A5D3D5Q01.5e-2558.97Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol... [more]
A0A5A7V9352.0e-2555.04Ty3-gypsy retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
BLAST of Lag0014797 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..45
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 23..46

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0014797.1Lag0014797.1mRNA