![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
Lag0014635 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGAGCTTTCTCCGGCGGACTCCTTCTCGGCTTCCGGACGCAAAGACGACGCCGGAGCGGCCTTCGTCCTCGAATCCAAAGGTCCCGAGTGAGATTTTTGGGCTTTGAAGAGTTGGAATGCGGTGGTTATTGATGGGCTAATTGAGTGGAATTGATTTTGTGAAAAAACAGGGCAGTGGTGGCACGCCGGATTCCACTTGACGACGGCGATCGTGGGGCCGCCGATTCTGACTCTGCCGTTTGCCTTCAGAGGATTGGGTTGGGGAGTGGGATTCGTGTGCTTGACGGTCATGGCGGCGGTGACTTTCTACTCTTACTACCTCTTGTCCAAGGTGCTGGAGCTCTGTGAGAAACAGGGCCGCCGCCACATCCTCCCCCTCCCGTTTCAGATCTGA ATGGCAGAGCTTTCTCCGGCGGACTCCTTCTCGGCTTCCGGACGCAAAGACGACGCCGGAGCGGCCTTCGTCCTCGAATCCAAAGGGCAGTGGTGGCACGCCGGATTCCACTTGACGACGGCGATCGTGGGGCCGCCGATTCTGACTCTGCCGTTTGCCTTCAGAGGATTGGGTTGGGGAGTGGGATTCGTGTGCTTGACGGTCATGGCGGCGGTGACTTTCTACTCTTACTACCTCTTGTCCAAGGTGCTGGAGCTCTGTGAGAAACAGGGCCGCCGCCACATCCTCCCCCTCCCGTTTCAGATCTGA ATGGCAGAGCTTTCTCCGGCGGACTCCTTCTCGGCTTCCGGACGCAAAGACGACGCCGGAGCGGCCTTCGTCCTCGAATCCAAAGGGCAGTGGTGGCACGCCGGATTCCACTTGACGACGGCGATCGTGGGGCCGCCGATTCTGACTCTGCCGTTTGCCTTCAGAGGATTGGGTTGGGGAGTGGGATTCGTGTGCTTGACGGTCATGGCGGCGGTGACTTTCTACTCTTACTACCTCTTGTCCAAGGTGCTGGAGCTCTGTGAGAAACAGGGCCGCCGCCACATCCTCCCCCTCCCGTTTCAGATCTGA MAELSPADSFSASGRKDDAGAAFVLESKGQWWHAGFHLTTAIVGPPILTLPFAFRGLGWGVGFVCLTVMAAVTFYSYYLLSKVLELCEKQGRRHILPLPFQI Homology
BLAST of Lag0014635 vs. NCBI nr
Match: XP_038906705.1 (probable GABA transporter 2 [Benincasa hispida]) HSP 1 Score: 177.6 bits (449), Expect = 5.6e-41 Identity = 87/95 (91.58%), Postives = 88/95 (92.63%), Query Frame = 0
BLAST of Lag0014635 vs. NCBI nr
Match: XP_004143875.1 (probable GABA transporter 2 [Cucumis sativus] >KGN50030.1 hypothetical protein Csa_000172 [Cucumis sativus]) HSP 1 Score: 176.4 bits (446), Expect = 1.2e-40 Identity = 86/95 (90.53%), Postives = 88/95 (92.63%), Query Frame = 0
BLAST of Lag0014635 vs. NCBI nr
Match: XP_022145892.1 (probable GABA transporter 2 [Momordica charantia]) HSP 1 Score: 175.6 bits (444), Expect = 2.1e-40 Identity = 84/95 (88.42%), Postives = 88/95 (92.63%), Query Frame = 0
BLAST of Lag0014635 vs. NCBI nr
Match: KAG6579549.1 (putative GABA transporter 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017008.1 putative GABA transporter 2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 174.1 bits (440), Expect = 6.2e-40 Identity = 85/95 (89.47%), Postives = 87/95 (91.58%), Query Frame = 0
BLAST of Lag0014635 vs. NCBI nr
Match: XP_023549801.1 (probable GABA transporter 2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 174.1 bits (440), Expect = 6.2e-40 Identity = 85/95 (89.47%), Postives = 87/95 (91.58%), Query Frame = 0
BLAST of Lag0014635 vs. ExPASy Swiss-Prot
Match: Q8L4X4 (Probable GABA transporter 2 OS=Arabidopsis thaliana OX=3702 GN=At5g41800 PE=1 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 2.0e-33 Identity = 65/88 (73.86%), Postives = 73/88 (82.95%), Query Frame = 0
BLAST of Lag0014635 vs. ExPASy Swiss-Prot
Match: F4HW02 (GABA transporter 1 OS=Arabidopsis thaliana OX=3702 GN=GAT1 PE=1 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 1.1e-20 Identity = 47/78 (60.26%), Postives = 56/78 (71.79%), Query Frame = 0
BLAST of Lag0014635 vs. ExPASy Swiss-Prot
Match: Q9SR44 (Lysine histidine transporter-like 2 OS=Arabidopsis thaliana OX=3702 GN=At1g67640 PE=2 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 4.2e-07 Identity = 25/85 (29.41%), Postives = 44/85 (51.76%), Query Frame = 0
BLAST of Lag0014635 vs. ExPASy Swiss-Prot
Match: Q9C9J0 (Lysine histidine transporter-like 5 OS=Arabidopsis thaliana OX=3702 GN=At1g71680 PE=2 SV=2) HSP 1 Score: 55.1 bits (131), Expect = 5.5e-07 Identity = 24/58 (41.38%), Postives = 38/58 (65.52%), Query Frame = 0
BLAST of Lag0014635 vs. ExPASy Swiss-Prot
Match: Q9LRB5 (Lysine histidine transporter 2 OS=Arabidopsis thaliana OX=3702 GN=LHT2 PE=1 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 9.4e-07 Identity = 24/85 (28.24%), Postives = 46/85 (54.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|