Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGCAGCCAAGCTTTCTCTCGCTCTCTTCGCTCTGGCCGTCCTGGCCGTCAATTACTCCGCCGTCTCCGCCGCACATGACGCTCCAGCGCCGGCCGTCGACTGCTCCAGCCTCATCCTCAGCATGGCCGACTGCCTCTCCTTCGTCTCCAACGACAGCACCACCACCAAGCCCGAAGGATCCTGCTGCACCGGCCTCAAAACCGTCCTCAAAGCCGACGCCGACTGCCTCTGCCAGGCCTTCAAGAACAGCGCTCAGTTAGGCGTCGTCCTCAACGTCACCAAGGCTCTCTCACTCCCCGCCGCCTGCAAAGTCTCCGCTCCTGCCGCTGCTAACTGCAAATGTAAGGCTAATTCCTCCAAATCGCTCTTCTCTTTCTGCTTCAGAAAAAAGCCCTAGGGAAACTAACTGATCTGTTTCTGTTTGTGTGAAATCGCTGTTTATCGTTTCGTTTTGCAGTGTCGGTTTCTCCCACTGGATCTCCAGGTACTATTTCTAATTAGTCTCAGTCTGTTGATTCCGATCTGGATTTTGGAATGCTTTTGAGGAAAATTCCTGAGCGTTCGTTCTGTTTGGATTGTTGTTTTGATGCAGCGGTTACGCCCACTGCCTCGCCGAAATCGTCGGCGGCCGCAACTTCAGTTACGAACGAGCCGACGCCGGCTCCGGCACCTGGAAAGTCGGGAGCGGCGGGAGGTTTGGTCTCGGTTGGATCGCTAATCGCCGCCATTGGCGTTGCTCTGTTCTTCAGTTTTTGA
mRNA sequence
ATGGCCGCAGCCAAGCTTTCTCTCGCTCTCTTCGCTCTGGCCGTCCTGGCCGTCAATTACTCCGCCGTCTCCGCCGCACATGACGCTCCAGCGCCGGCCGTCGACTGCTCCAGCCTCATCCTCAGCATGGCCGACTGCCTCTCCTTCGTCTCCAACGACAGCACCACCACCAAGCCCGAAGGATCCTGCTGCACCGGCCTCAAAACCGTCCTCAAAGCCGACGCCGACTGCCTCTGCCAGGCCTTCAAGAACAGCGCTCAGTTAGGCGTCGTCCTCAACGTCACCAAGGCTCTCTCACTCCCCGCCGCCTGCAAAGTCTCCGCTCCTGCCGCTGCTAACTGCAAATTGTCGGTTTCTCCCACTGGATCTCCAGCGGTTACGCCCACTGCCTCGCCGAAATCGTCGGCGGCCGCAACTTCAGTTACGAACGAGCCGACGCCGGCTCCGGCACCTGGAAAGTCGGGAGCGGCGGGAGGTTTGGTCTCGGTTGGATCGCTAATCGCCGCCATTGGCGTTGCTCTGTTCTTCAGTTTTTGA
Coding sequence (CDS)
ATGGCCGCAGCCAAGCTTTCTCTCGCTCTCTTCGCTCTGGCCGTCCTGGCCGTCAATTACTCCGCCGTCTCCGCCGCACATGACGCTCCAGCGCCGGCCGTCGACTGCTCCAGCCTCATCCTCAGCATGGCCGACTGCCTCTCCTTCGTCTCCAACGACAGCACCACCACCAAGCCCGAAGGATCCTGCTGCACCGGCCTCAAAACCGTCCTCAAAGCCGACGCCGACTGCCTCTGCCAGGCCTTCAAGAACAGCGCTCAGTTAGGCGTCGTCCTCAACGTCACCAAGGCTCTCTCACTCCCCGCCGCCTGCAAAGTCTCCGCTCCTGCCGCTGCTAACTGCAAATTGTCGGTTTCTCCCACTGGATCTCCAGCGGTTACGCCCACTGCCTCGCCGAAATCGTCGGCGGCCGCAACTTCAGTTACGAACGAGCCGACGCCGGCTCCGGCACCTGGAAAGTCGGGAGCGGCGGGAGGTTTGGTCTCGGTTGGATCGCTAATCGCCGCCATTGGCGTTGCTCTGTTCTTCAGTTTTTGA
Protein sequence
MAAAKLSLALFALAVLAVNYSAVSAAHDAPAPAVDCSSLILSMADCLSFVSNDSTTTKPEGSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAAANCKLSVSPTGSPAVTPTASPKSSAAATSVTNEPTPAPAPGKSGAAGGLVSVGSLIAAIGVALFFSF
Homology
BLAST of Lag0014629 vs. NCBI nr
Match:
XP_038888277.1 (non-specific lipid transfer protein GPI-anchored 31 [Benincasa hispida])
HSP 1 Score: 262.3 bits (669), Expect = 3.0e-66
Identity = 147/174 (84.48%), Postives = 160/174 (91.95%), Query Frame = 0
Query: 1 MAAAKLSLALFALAVLAVNYSAVSAAHDAPAPAVDCSSLILSMADCLSFVSNDSTTTKPE 60
MA AKL LALFAL LAV++SAVSAAHDAPAPAVDCSSLIL+MADCLSFVSNDSTTTKP+
Sbjct: 1 MATAKLFLALFALPFLAVHFSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPQ 60
Query: 61 GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAAANCKLSVSP 120
GSCC+GLKTVLKADADCLC+AFKNSAQLGVVLNV+KALSLPAACKVSAPAA+NCKLS+SP
Sbjct: 61 GSCCSGLKTVLKADADCLCEAFKNSAQLGVVLNVSKALSLPAACKVSAPAASNCKLSISP 120
Query: 121 TGSPAVTPTASPKSSAAATSVTNEPTPAPAPGKSGAAGGLVSVGSLIAAIGVAL 175
GSPAVTPTASPKS+ A V N PT APAPGKS A+G LVSVG++IAAIGVAL
Sbjct: 121 AGSPAVTPTASPKSTVAEAPVVNVPTAAPAPGKSAASGALVSVGAVIAAIGVAL 174
BLAST of Lag0014629 vs. NCBI nr
Match:
XP_022963887.1 (non-specific lipid-transfer protein-like protein At5g64080 [Cucurbita moschata] >KAG7011413.1 Non-specific lipid-transfer protein-like protein [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 258.8 bits (660), Expect = 3.3e-65
Identity = 147/178 (82.58%), Postives = 155/178 (87.08%), Query Frame = 0
Query: 1 MAAAKLSLALFALAVLAVNYSAVSAAHDAPAPAVDCSSLILSMADCLSFVSNDSTTTKPE 60
MA AKL LALFALAV +++ SAVSAAHDAPAPAVDCSSLIL+MADCLSFVSNDSTTTKPE
Sbjct: 1 MATAKLFLALFALAVFSLDLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPE 60
Query: 61 GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAAANCKLSVSP 120
GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAA+NCKLS SP
Sbjct: 61 GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSP 120
Query: 121 TGSPAVTPTASPKSSAAATSVTNEPTPAPAPGKSGAAGGLVSVGSLIAAIGVALFFSF 179
GSPA+ P SPKS AA NEPT AP PGKS A G +VSVGS+I AIGVAL SF
Sbjct: 121 AGSPAIAPANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMVSVGSVIGAIGVALLSSF 178
BLAST of Lag0014629 vs. NCBI nr
Match:
KAG6571687.1 (Non-specific lipid-transfer protein-like protein, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 257.7 bits (657), Expect = 7.4e-65
Identity = 146/178 (82.02%), Postives = 155/178 (87.08%), Query Frame = 0
Query: 1 MAAAKLSLALFALAVLAVNYSAVSAAHDAPAPAVDCSSLILSMADCLSFVSNDSTTTKPE 60
MA AKL LALFA+AV +++ SAVSAAHDAPAPAVDCSSLIL+MADCLSFVSNDSTTTKPE
Sbjct: 1 MATAKLFLALFAVAVFSLDLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPE 60
Query: 61 GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAAANCKLSVSP 120
GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAA+NCKLS SP
Sbjct: 61 GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSP 120
Query: 121 TGSPAVTPTASPKSSAAATSVTNEPTPAPAPGKSGAAGGLVSVGSLIAAIGVALFFSF 179
GSPA+ P SPKS AA NEPT AP PGKS A G +VSVGS+I AIGVAL SF
Sbjct: 121 AGSPAIAPANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMVSVGSVIGAIGVALLSSF 178
BLAST of Lag0014629 vs. NCBI nr
Match:
XP_022967631.1 (non-specific lipid-transfer protein-like protein At5g64080 [Cucurbita maxima])
HSP 1 Score: 256.1 bits (653), Expect = 2.2e-64
Identity = 145/178 (81.46%), Postives = 154/178 (86.52%), Query Frame = 0
Query: 1 MAAAKLSLALFALAVLAVNYSAVSAAHDAPAPAVDCSSLILSMADCLSFVSNDSTTTKPE 60
MA AKL LALFALAVL+++ SAVSAAHDAPAPAVDCSSLIL+MADCLSFVSNDSTTTKPE
Sbjct: 1 MATAKLFLALFALAVLSLDLSAVSAAHDAPAPAVDCSSLILNMADCLSFVSNDSTTTKPE 60
Query: 61 GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAAANCKLSVSP 120
GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAA+NCKLS SP
Sbjct: 61 GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAASNCKLSNSP 120
Query: 121 TGSPAVTPTASPKSSAAATSVTNEPTPAPAPGKSGAAGGLVSVGSLIAAIGVALFFSF 179
G PA+ P SPKS AA NEPT AP PGKS A G +VS+GS+I AIGV L SF
Sbjct: 121 AGPPAIAPANSPKSEAAIAPAVNEPTAAPGPGKSAATGAMVSIGSVIGAIGVTLLRSF 178
BLAST of Lag0014629 vs. NCBI nr
Match:
XP_022141909.1 (non-specific lipid-transfer protein-like protein At5g64080 [Momordica charantia])
HSP 1 Score: 255.4 bits (651), Expect = 3.7e-64
Identity = 149/183 (81.42%), Postives = 157/183 (85.79%), Query Frame = 0
Query: 1 MAAAKLSLALFALAVLAVNYSAVSAAHDAPAPAVDCSSLILSMADCLSFVSNDSTTTKPE 60
MAA KLSLAL ALAVLAVN+S V+ AHDAP PAVDCSSLIL+MADCLSFVSNDSTTTKPE
Sbjct: 1 MAATKLSLALCALAVLAVNFSGVAPAHDAPPPAVDCSSLILNMADCLSFVSNDSTTTKPE 60
Query: 61 GSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAAANCKLSVSP 120
GSCCTGLKTVLKADADCLC+AFKNSAQLGVVLNVTKALSLPAACKVSAPAAANCKLS SP
Sbjct: 61 GSCCTGLKTVLKADADCLCEAFKNSAQLGVVLNVTKALSLPAACKVSAPAAANCKLSTSP 120
Query: 121 TGSPAVTPTASPKSSAAA-----TSVTNEPTPAPAPGKSGAAGGLVSVGSLIAAIGVALF 179
GSPA+TP +SP S AA T+EP PAPAPGKS A+ VSVGSLIAAIG ALF
Sbjct: 121 AGSPALTPKSSPGPSTAAAPEIGAPTTSEPAPAPAPGKSAASAVFVSVGSLIAAIGAALF 180
BLAST of Lag0014629 vs. ExPASy Swiss-Prot
Match:
Q8VYI9 (Non-specific lipid transfer protein GPI-anchored 31 OS=Arabidopsis thaliana OX=3702 GN=LTPG31 PE=2 SV=1)
HSP 1 Score: 139.0 bits (349), Expect = 5.1e-32
Identity = 86/172 (50.00%), Postives = 119/172 (69.19%), Query Frame = 0
Query: 10 LFALAVLAV-NYSAVSAAH---DAPAPAVDCSSLILSMADCLSFVSNDSTTTKPEGSCCT 69
LF + +L++ + S + A+H APAP+VDCS+LIL+MADCLSFVS+ T KPEG+CC+
Sbjct: 13 LFLIVLLSLSSVSVLGASHHHATAPAPSVDCSTLILNMADCLSFVSSGGTVAKPEGTCCS 72
Query: 70 GLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAAANCKLSVSPTGSPA 129
GLKTVLKAD+ CLC+AFK+SA LGV LN+TKA +LPAACK+ AP+ A C LSV+P+ +P
Sbjct: 73 GLKTVLKADSQCLCEAFKSSASLGVTLNITKASTLPAACKLHAPSIATCGLSVAPSTAPG 132
Query: 130 VTPTASPKSSAAATSVTNEPTPAPAPGKSGAAGGLVSVGSLIAAIGVALFFS 178
+ P +AA P P+ G G++ S ++++A+ LFFS
Sbjct: 133 LAPGV----AAAGPETAGFLAPNPSSGNDGSSLIPTSFTTVLSAVLFVLFFS 180
BLAST of Lag0014629 vs. ExPASy Swiss-Prot
Match:
Q9ZQI8 (Non-specific lipid transfer protein GPI-anchored 11 OS=Arabidopsis thaliana OX=3702 GN=LTPG11 PE=2 SV=1)
HSP 1 Score: 119.0 bits (297), Expect = 5.4e-26
Identity = 84/171 (49.12%), Postives = 113/171 (66.08%), Query Frame = 0
Query: 12 ALAVLAVNYSAVSAAHDAPA-PAVDCSSLILSMADCLSFVSNDSTTTKPEGSCCTGLKTV 71
A A + + +S V+ A AVDCSSLIL+MADCLSFV++ ST KPEG+CC+GLKTV
Sbjct: 2 AYATILMIFSVVALMSGERAHAAVDCSSLILNMADCLSFVTSGSTVVKPEGTCCSGLKTV 61
Query: 72 LKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAAANCKLSVS---PTGSPAVT 131
++ +CLC+AFKNS LG+ L+++KA SLP+ CKV+AP +A C LSVS P +P ++
Sbjct: 62 VRTGPECLCEAFKNSGSLGLTLDLSKAASLPSVCKVAAPPSARCGLSVSGDPPATAPGLS 121
Query: 132 PTASPKSSAAATSVTNEPTPAPAPGKSGAAGGLVSVGSLIAAIGVALFFSF 179
PTA + A +S N TP +P S A+ L+SV S I +AL SF
Sbjct: 122 PTAG-AGAPALSSGANAATPVSSPRSSDAS--LLSV-SFAFVIFMALISSF 168
BLAST of Lag0014629 vs. ExPASy Swiss-Prot
Match:
Q2PE60 (Non-specific lipid transfer protein GPI-anchored 23 OS=Arabidopsis thaliana OX=3702 GN=LTPG23 PE=2 SV=1)
HSP 1 Score: 84.0 bits (206), Expect = 1.9e-15
Identity = 51/126 (40.48%), Postives = 73/126 (57.94%), Query Frame = 0
Query: 30 PAPAVDCSSLILSMADCLSFVSNDSTTTKPEGSCCTGLKTVLKADADCLCQAFKNSAQLG 89
P+ + DCSS+I SM DCLSF++ ST P +CC G+KTVL CLC A ++S ++G
Sbjct: 39 PSNSTDCSSVIYSMVDCLSFLTVGSTDPSPTKTCCVGVKTVLNYSPKCLCSALESSREMG 98
Query: 90 VVLNVTKALSLPAACKVSAPAAANCKLSV----SPTGSPAVTPTASPKSSAAATSVTNEP 149
VL+ TKAL++P C V P NC +S +P P +PT SP S+ + + P
Sbjct: 99 FVLDDTKALAMPKICNV--PIDPNCDVSTPAASTPVSPPVESPTTSPSSAKSPAITPSSP 158
Query: 150 TPAPAP 152
+ +P
Sbjct: 159 AVSHSP 162
BLAST of Lag0014629 vs. ExPASy Swiss-Prot
Match:
Q2PE70 (Non-specific lipid transfer protein GPI-anchored 4 OS=Arabidopsis thaliana OX=3702 GN=LTPG4 PE=2 SV=1)
HSP 1 Score: 81.3 bits (199), Expect = 1.3e-14
Identity = 69/192 (35.94%), Postives = 106/192 (55.21%), Query Frame = 0
Query: 5 KLSLALFALAVLAVNYSAVSAAH------------DAPAP---AVDCSSLILSMADCLSF 64
K SL L + +L + S V+ H APAP + DCS++I SM DCL +
Sbjct: 2 KQSLLLSFVLLLLSSSSLVTPIHARNKSNPAKSPVGAPAPGPSSSDCSTVIYSMMDCLGY 61
Query: 65 VSNDSTTTKPEGSCCTGLKTVLKADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAP 124
+ S TKPE SCCTG++TVL+ + C+C ++ ++G+ LN T+AL+ P ACK+S
Sbjct: 62 LGVGSNETKPEKSCCTGIETVLQYNPQCICAGLVSAGEMGIELNSTRALATPKACKLSI- 121
Query: 125 AAANCKL-----------SVSPT-GSPAVTPTASPKSSAAATSVTNEPTP---APAPGKS 167
A +C + VSP+ G+P +P+A+ +ATS +++ TP AP+P S
Sbjct: 122 APPHCGIITSGATTPGASPVSPSAGAPTTSPSAAKSPETSATSPSSDETPSMTAPSPSSS 181
BLAST of Lag0014629 vs. ExPASy Swiss-Prot
Match:
Q6ASY2 (Non-specific lipid transfer protein-like 1 OS=Oryza sativa subsp. japonica OX=39947 GN=LTPL1 PE=1 SV=1)
HSP 1 Score: 68.2 bits (165), Expect = 1.1e-10
Identity = 71/185 (38.38%), Postives = 95/185 (51.35%), Query Frame = 0
Query: 2 AAAKLSLALFALAVLAVNYSAVSAAHDAPAPAVDCSSLILSMADCLSFVSNDSTT-TKPE 61
AAA L + LA +A +A+ APAPAVDC++ L +ADCL +V+ T ++P
Sbjct: 7 AAAVACLLVVGLAAVA-GVDGATASSPAPAPAVDCTAEALKLADCLDYVTPGKTAPSRPS 66
Query: 62 GSCCTGLKTVLK--ADADCLCQAFKNSAQLGVVLNVTKALSLPAACKVSAPAAANCKLSV 121
CC +K LK A CLC AF S L + +N+T+AL LPAAC A A + C +
Sbjct: 67 KLCCGEVKGALKDSAAVGCLCAAF-TSKTLPLPINITRALHLPAACGADASAFSKC---L 126
Query: 122 SPTGSPAVTPTASPKSSAAATSVTNEPTPAPAPGKSGAAGGLVSVGS-LIAAIGVA---- 179
+P SP+V P S S AA APA G + A + S + L+ A VA
Sbjct: 127 APAPSPSVAPGTSSGSGGAAA--------APAKGAAAARSPMASTTAVLVVAAAVAAPLL 178
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038888277.1 | 3.0e-66 | 84.48 | non-specific lipid transfer protein GPI-anchored 31 [Benincasa hispida] | [more] |
XP_022963887.1 | 3.3e-65 | 82.58 | non-specific lipid-transfer protein-like protein At5g64080 [Cucurbita moschata] ... | [more] |
KAG6571687.1 | 7.4e-65 | 82.02 | Non-specific lipid-transfer protein-like protein, partial [Cucurbita argyrosperm... | [more] |
XP_022967631.1 | 2.2e-64 | 81.46 | non-specific lipid-transfer protein-like protein At5g64080 [Cucurbita maxima] | [more] |
XP_022141909.1 | 3.7e-64 | 81.42 | non-specific lipid-transfer protein-like protein At5g64080 [Momordica charantia] | [more] |
Match Name | E-value | Identity | Description | |
Q8VYI9 | 5.1e-32 | 50.00 | Non-specific lipid transfer protein GPI-anchored 31 OS=Arabidopsis thaliana OX=3... | [more] |
Q9ZQI8 | 5.4e-26 | 49.12 | Non-specific lipid transfer protein GPI-anchored 11 OS=Arabidopsis thaliana OX=3... | [more] |
Q2PE60 | 1.9e-15 | 40.48 | Non-specific lipid transfer protein GPI-anchored 23 OS=Arabidopsis thaliana OX=3... | [more] |
Q2PE70 | 1.3e-14 | 35.94 | Non-specific lipid transfer protein GPI-anchored 4 OS=Arabidopsis thaliana OX=37... | [more] |
Q6ASY2 | 1.1e-10 | 38.38 | Non-specific lipid transfer protein-like 1 OS=Oryza sativa subsp. japonica OX=39... | [more] |