Lag0014511 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0014511
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionPathogenesis-related protein-1-like protein
Locationchr12: 1548050 .. 1548529 (+)
RNA-Seq ExpressionLag0014511
SyntenyLag0014511
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTCCCCCACCATTCTCTCAACCATATGCTTACTAGGGTTACTTCTAGCTCCCATCTCCCTGGCCCAAAACTCCCCCCAAGACTTCGTCGACACACACAACGCCGTTCGAGCGGAGGTCGGTGTCGGGCCGGTCTCCTGGGACGACACTCTAGCGGCCTACGCTCAGAATTATGCAGATAGCAAGATCGAAACCTGCGAGATGGAGCACTCCAACGGACCCTACGGCGAAAACCTCGCCGAGGGTTACGGTGAGATGACAGCAGTGGAGGCGGTCAAGTTTTGGGCGACTGAGAAGAAGTTCTATAACCACCATTTGAACCGATGCGTCGGGGACGAGTGCGGCCATTACACACAAATAGTGTGGAGGGACACTAAACATATAGGGTGTGGTAGAGTGAAGTGTGAGAACAATTGGGTTTTTGTGATGTGCAACTATAATCCTCCTGGCAACTATATAGGCCAATATCCTTACTGA

mRNA sequence

ATGGCTTCCCCCACCATTCTCTCAACCATATGCTTACTAGGGTTACTTCTAGCTCCCATCTCCCTGGCCCAAAACTCCCCCCAAGACTTCGTCGACACACACAACGCCGTTCGAGCGGAGGTCGGTGTCGGGCCGGTCTCCTGGGACGACACTCTAGCGGCCTACGCTCAGAATTATGCAGATAGCAAGATCGAAACCTGCGAGATGGAGCACTCCAACGGACCCTACGGCGAAAACCTCGCCGAGGGTTACGGTGAGATGACAGCAGTGGAGGCGGTCAAGTTTTGGGCGACTGAGAAGAAGTTCTATAACCACCATTTGAACCGATGCGTCGGGGACGAGTGCGGCCATTACACACAAATAGTGTGGAGGGACACTAAACATATAGGGTGTGGTAGAGTGAAGTGTGAGAACAATTGGGTTTTTGTGATGTGCAACTATAATCCTCCTGGCAACTATATAGGCCAATATCCTTACTGA

Coding sequence (CDS)

ATGGCTTCCCCCACCATTCTCTCAACCATATGCTTACTAGGGTTACTTCTAGCTCCCATCTCCCTGGCCCAAAACTCCCCCCAAGACTTCGTCGACACACACAACGCCGTTCGAGCGGAGGTCGGTGTCGGGCCGGTCTCCTGGGACGACACTCTAGCGGCCTACGCTCAGAATTATGCAGATAGCAAGATCGAAACCTGCGAGATGGAGCACTCCAACGGACCCTACGGCGAAAACCTCGCCGAGGGTTACGGTGAGATGACAGCAGTGGAGGCGGTCAAGTTTTGGGCGACTGAGAAGAAGTTCTATAACCACCATTTGAACCGATGCGTCGGGGACGAGTGCGGCCATTACACACAAATAGTGTGGAGGGACACTAAACATATAGGGTGTGGTAGAGTGAAGTGTGAGAACAATTGGGTTTTTGTGATGTGCAACTATAATCCTCCTGGCAACTATATAGGCCAATATCCTTACTGA

Protein sequence

MASPTILSTICLLGLLLAPISLAQNSPQDFVDTHNAVRAEVGVGPVSWDDTLAAYAQNYADSKIETCEMEHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYNHHLNRCVGDECGHYTQIVWRDTKHIGCGRVKCENNWVFVMCNYNPPGNYIGQYPY
Homology
BLAST of Lag0014511 vs. NCBI nr
Match: XP_022952867.1 (basic form of pathogenesis-related protein 1-like [Cucurbita moschata])

HSP 1 Score: 317.0 bits (811), Expect = 9.2e-83
Identity = 143/159 (89.94%), Postives = 151/159 (94.97%), Query Frame = 0

Query: 1   MASPTILSTICLLGLLLAPISLAQNSPQDFVDTHNAVRAEVGVGPVSWDDTLAAYAQNYA 60
           MASPTILSTICL+G LLAPIS AQNSP+DFVDTHN +RA VGVGPVSWDD LAAYAQNYA
Sbjct: 1   MASPTILSTICLVGFLLAPISNAQNSPEDFVDTHNDIRAAVGVGPVSWDDNLAAYAQNYA 60

Query: 61  DSKIETCEMEHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYNHHLNRCVGDECGHYTQ 120
            SKIETCEMEHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYNHHLNRCVGDECGHYTQ
Sbjct: 61  YSKIETCEMEHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYNHHLNRCVGDECGHYTQ 120

Query: 121 IVWRDTKHIGCGRVKCENNWVFVMCNYNPPGNYIGQYPY 160
           IVWR+TK+IGC RVKCENNWVFV+C+Y PPGNY+GQYPY
Sbjct: 121 IVWRNTKNIGCARVKCENNWVFVICSYYPPGNYVGQYPY 159

BLAST of Lag0014511 vs. NCBI nr
Match: XP_023554743.1 (basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 316.2 bits (809), Expect = 1.6e-82
Identity = 143/159 (89.94%), Postives = 150/159 (94.34%), Query Frame = 0

Query: 1   MASPTILSTICLLGLLLAPISLAQNSPQDFVDTHNAVRAEVGVGPVSWDDTLAAYAQNYA 60
           MASPTILSTICL+G LLAPIS AQNSP+DFVDTHN VRA VGVGPVSWDD LA YAQNYA
Sbjct: 1   MASPTILSTICLVGFLLAPISNAQNSPEDFVDTHNDVRAAVGVGPVSWDDNLAVYAQNYA 60

Query: 61  DSKIETCEMEHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYNHHLNRCVGDECGHYTQ 120
            SKIETCEMEHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYNHHLN+CVGDECGHYTQ
Sbjct: 61  YSKIETCEMEHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYNHHLNQCVGDECGHYTQ 120

Query: 121 IVWRDTKHIGCGRVKCENNWVFVMCNYNPPGNYIGQYPY 160
           IVWRDTK+IGC RVKCENNWVFV+C+Y PPGNY+GQYPY
Sbjct: 121 IVWRDTKNIGCARVKCENNWVFVICSYYPPGNYVGQYPY 159

BLAST of Lag0014511 vs. NCBI nr
Match: XP_038888452.1 (basic form of pathogenesis-related protein 1-like [Benincasa hispida])

HSP 1 Score: 312.4 bits (799), Expect = 2.3e-81
Identity = 143/160 (89.38%), Postives = 150/160 (93.75%), Query Frame = 0

Query: 1   MASPT-ILSTICLLGLLLAPISLAQNSPQDFVDTHNAVRAEVGVGPVSWDDTLAAYAQNY 60
           MASPT ILST+CL+   LA IS AQNSPQDFVDTHN VRA VGVGPVSWDDTLAAYAQNY
Sbjct: 1   MASPTIILSTMCLVSFFLATISKAQNSPQDFVDTHNIVRAAVGVGPVSWDDTLAAYAQNY 60

Query: 61  ADSKIETCEMEHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYNHHLNRCVGDECGHYT 120
           ADSKI+TCEM+HSNGPYGENLAEGY EMTAVEAVKFWATEKKFYNHHLNRCVGDECGHYT
Sbjct: 61  ADSKIDTCEMQHSNGPYGENLAEGYDEMTAVEAVKFWATEKKFYNHHLNRCVGDECGHYT 120

Query: 121 QIVWRDTKHIGCGRVKCENNWVFVMCNYNPPGNYIGQYPY 160
           QIVWRDTK+IGC RVKCENNWVFV+CNYNPPGNYIGQ+PY
Sbjct: 121 QIVWRDTKNIGCARVKCENNWVFVICNYNPPGNYIGQHPY 160

BLAST of Lag0014511 vs. NCBI nr
Match: XP_022972427.1 (basic form of pathogenesis-related protein 1-like [Cucurbita maxima])

HSP 1 Score: 312.0 bits (798), Expect = 3.0e-81
Identity = 141/159 (88.68%), Postives = 150/159 (94.34%), Query Frame = 0

Query: 1   MASPTILSTICLLGLLLAPISLAQNSPQDFVDTHNAVRAEVGVGPVSWDDTLAAYAQNYA 60
           MAS TILSTICL+G LLAPIS AQNSP+DFVDTHN +RA VGVGPVSWD+ LAAYAQNYA
Sbjct: 1   MASHTILSTICLVGFLLAPISNAQNSPEDFVDTHNDIRAAVGVGPVSWDNNLAAYAQNYA 60

Query: 61  DSKIETCEMEHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYNHHLNRCVGDECGHYTQ 120
            SKIETC+MEHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYNHHLNRCVGDECGHYTQ
Sbjct: 61  YSKIETCKMEHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYNHHLNRCVGDECGHYTQ 120

Query: 121 IVWRDTKHIGCGRVKCENNWVFVMCNYNPPGNYIGQYPY 160
           IVWRDTK+IGC RVKCENNWVFV+C+Y PPGNY+GQYPY
Sbjct: 121 IVWRDTKNIGCARVKCENNWVFVICSYYPPGNYVGQYPY 159

BLAST of Lag0014511 vs. NCBI nr
Match: XP_022148797.1 (basic form of pathogenesis-related protein 1-like [Momordica charantia])

HSP 1 Score: 303.9 bits (777), Expect = 8.1e-79
Identity = 137/157 (87.26%), Postives = 146/157 (92.99%), Query Frame = 0

Query: 3   SPTILSTICLLGLLLAPISLAQNSPQDFVDTHNAVRAEVGVGPVSWDDTLAAYAQNYADS 62
           SPTIL TICL+G L+AP+S+AQNSPQDFVDTHNAVRAEVGV PVSWD TLAAYAQNYA+S
Sbjct: 7   SPTILYTICLVGFLIAPLSMAQNSPQDFVDTHNAVRAEVGVWPVSWDATLAAYAQNYANS 66

Query: 63  KIETCEMEHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYNHHLNRCVGDECGHYTQIV 122
           K ETCEM HSNGPYGENLAEGYGEMTAVEAVKFWATEKKFY+H  NRCVGDECGHYTQIV
Sbjct: 67  KSETCEMVHSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYDHRANRCVGDECGHYTQIV 126

Query: 123 WRDTKHIGCGRVKCENNWVFVMCNYNPPGNYIGQYPY 160
           WRD+K IGC RVKCENNWVFV+CNY+PPGNYIGQ PY
Sbjct: 127 WRDSKRIGCARVKCENNWVFVICNYDPPGNYIGQLPY 163

BLAST of Lag0014511 vs. ExPASy Swiss-Prot
Match: P11670 (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 4.8e-50
Identity = 82/144 (56.94%), Postives = 109/144 (75.69%), Query Frame = 0

Query: 16  LLAPISLAQNSPQDFVDTHNAVRAEVGVGPVSWDDTLAAYAQNYADSKIETCEMEHSNGP 75
           +L   S AQNSPQD+++ HNA R +VGVGP++WD+ LAAYAQNYA+ +I  C M HS+GP
Sbjct: 16  ILIHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQRIGDCGMIHSHGP 75

Query: 76  YGENLAEGYGEMTAVEAVKFWATEKKFYNHHLNRCVGDECGHYTQIVWRDTKHIGCGRVK 135
           YGENLA  + ++ A  AVK W  EK+FY+++ N CVG  CGHYTQ+VWR++  +GC RV+
Sbjct: 76  YGENLAAAFPQLNAAGAVKMWVDEKRFYDYNSNSCVGGVCGHYTQVVWRNSVRLGCARVR 135

Query: 136 CENNWVFVMCNYNPPGNYIGQYPY 160
             N W F+ CNY+PPGN+IGQ P+
Sbjct: 136 SNNGWFFITCNYDPPGNFIGQRPF 159

BLAST of Lag0014511 vs. ExPASy Swiss-Prot
Match: P08299 (Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 1.6e-45
Identity = 83/156 (53.21%), Postives = 109/156 (69.87%), Query Frame = 0

Query: 6   ILSTICLLGLLLAPISLAQNSPQDFVDTHNAVRAEVGVGPVSWDDTLAAYAQNYADSKIE 65
           +L +  LL L+++    AQNS QD++D HN  RA+VGV P++WDD +AAYAQNYA     
Sbjct: 13  LLVSTLLLFLVISHSCRAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYASQLAA 72

Query: 66  TCEMEHSNGPYGENLAEGYGE-MTAVEAVKFWATEKKFYNHHLNRCV-GDECGHYTQIVW 125
            C + HS+G YGENLAEG G+ MTA +AV+ W  EK++Y+H  N C  G  CGHYTQ+VW
Sbjct: 73  DCNLVHSHGQYGENLAEGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYTQVVW 132

Query: 126 RDTKHIGCGRVKCENNWVFVMCNYNPPGNYIGQYPY 160
           R++  +GC RV+C N    V CNY+PPGNY G+ PY
Sbjct: 133 RNSVRVGCARVQCNNGGYVVSCNYDPPGNYRGESPY 168

BLAST of Lag0014511 vs. ExPASy Swiss-Prot
Match: P07053 (Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 2.1e-45
Identity = 86/161 (53.42%), Postives = 113/161 (70.19%), Query Frame = 0

Query: 1   MASPTILSTICLLGLLLAPISLAQNSPQDFVDTHNAVRAEVGVGPVSWDDTLAAYAQNYA 60
           M S  ++ST+ LL L+++  S AQNS QD++D HN  RA+VGV P++WD+ +AAYAQNY 
Sbjct: 9   MPSFFLVSTL-LLFLIISHSSHAQNSQQDYLDAHNTARADVGVEPLTWDNGVAAYAQNYV 68

Query: 61  DSKIETCEMEHSNGPYGENLAEGYGE-MTAVEAVKFWATEKKFYNHHLNRCV-GDECGHY 120
                 C + HS+G YGENLA+G G+ MTA +AV+ W  EK++Y+H  N C  G  CGHY
Sbjct: 69  SQLAADCNLVHSHGQYGENLAQGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHY 128

Query: 121 TQIVWRDTKHIGCGRVKCENNWVFVMCNYNPPGNYIGQYPY 160
           TQ+VWR++  +GC RVKC N    V CNY+PPGN IGQ PY
Sbjct: 129 TQVVWRNSVRVGCARVKCNNGGYVVSCNYDPPGNVIGQSPY 168

BLAST of Lag0014511 vs. ExPASy Swiss-Prot
Match: Q08697 (Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 2.3e-44
Identity = 75/145 (51.72%), Postives = 103/145 (71.03%), Query Frame = 0

Query: 11  CLLGLLLAPISLAQNSPQDFVDTHNAVRAEVGVGPVSWDDTLAAYAQNYADSKIETCEME 70
           C +  ++   S AQ   ++F++ HNA R  VGVGP++WDD LAAYAQNYA+ + + C M 
Sbjct: 9   CFITFIIFHSSQAQTPRENFLNAHNAARRRVGVGPMTWDDGLAAYAQNYANQRADDCGMI 68

Query: 71  HSNGPYGENLAEGYGEMTAVEAVKFWATEKKFYNHHLNRCV-GDECGHYTQIVWRDTKHI 130
           HS+GPYGENLA  + ++ A  AVK W  EK++Y+++ N C  G  CGHYTQ+VWR +  +
Sbjct: 69  HSDGPYGENLAAAFPQLNAAGAVKMWDDEKQWYDYNSNTCAPGKVCGHYTQVVWRKSVRL 128

Query: 131 GCGRVKCENNWVFVMCNYNPPGNYI 155
           GC RV+C + WVF+ CNY+PPGNYI
Sbjct: 129 GCARVRCNSGWVFITCNYDPPGNYI 153

BLAST of Lag0014511 vs. ExPASy Swiss-Prot
Match: Q41359 (Pathogenesis-related protein PR-1 type OS=Sambucus nigra OX=4202 PE=2 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 2.3e-44
Identity = 81/156 (51.92%), Postives = 108/156 (69.23%), Query Frame = 0

Query: 7   LSTICLLGLLLAPISLAQNSPQDFVDTHNAVRAEVGVGPVSWDDTLAAYAQNYADSKIET 66
           ++ +C++ L++   S+AQNSPQD+VD HNA R+ V VGPV+WD+++AA+A+ YA S+   
Sbjct: 12  VALVCVVALVMVQYSVAQNSPQDYVDAHNAARSAVNVGPVTWDESVAAFARQYAQSRAGD 71

Query: 67  CEMEHSNGP-YGENLAEGYG-EMTAVEAVKFWATEKKFYNHHLNRCV-GDECGHYTQIVW 126
           C + HS  P YGENLA G G E+T   AV  W  E+  YN + N C  G  CGHYTQ+VW
Sbjct: 72  CRLVHSGDPRYGENLAFGSGFELTGRNAVDMWVAERNDYNPNTNTCAPGKVCGHYTQVVW 131

Query: 127 RDTKHIGCGRVKCENNWVFVMCNYNPPGNYIGQYPY 160
           R++  IGC RV+C N   F+ CNY+PPGNY GQ PY
Sbjct: 132 RNSVRIGCARVRCNNGAWFITCNYSPPGNYAGQRPY 167

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022952867.19.2e-8389.94basic form of pathogenesis-related protein 1-like [Cucurbita moschata][more]
XP_023554743.11.6e-8289.94basic form of pathogenesis-related protein 1-like [Cucurbita pepo subsp. pepo][more]
XP_038888452.12.3e-8189.38basic form of pathogenesis-related protein 1-like [Benincasa hispida][more]
XP_022972427.13.0e-8188.68basic form of pathogenesis-related protein 1-like [Cucurbita maxima][more]
XP_022148797.18.1e-7987.26basic form of pathogenesis-related protein 1-like [Momordica charantia][more]
Match NameE-valueIdentityDescription
P116704.8e-5056.94Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 S... [more]
P082991.6e-4553.21Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1[more]
P070532.1e-4553.42Pathogenesis-related protein 1B OS=Nicotiana tabacum OX=4097 PE=2 SV=1[more]
Q086972.3e-4451.72Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1[more]
Q413592.3e-4451.92Pathogenesis-related protein PR-1 type OS=Sambucus nigra OX=4202 PE=2 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001283Cysteine-rich secretory protein-relatedPRINTSPR00837V5TPXLIKEcoord: 115..131
score: 60.62
coord: 142..155
score: 52.48
coord: 46..64
score: 41.27
coord: 92..105
score: 37.14
IPR001283Cysteine-rich secretory protein-relatedPANTHERPTHR10334CYSTEINE-RICH SECRETORY PROTEIN-RELATEDcoord: 5..159
IPR014044CAP domainSMARTSM00198SCP_3coord: 25..155
e-value: 2.9E-56
score: 202.9
IPR014044CAP domainPFAMPF00188CAPcoord: 32..147
e-value: 4.7E-25
score: 88.8
IPR035940CAP superfamilyGENE3D3.40.33.10CAPcoord: 21..159
e-value: 3.2E-45
score: 156.0
IPR035940CAP superfamilySUPERFAMILY55797PR-1-likecoord: 24..159
NoneNo IPR availablePANTHERPTHR10334:SF397SUBFAMILY NOT NAMEDcoord: 5..159
NoneNo IPR availableCDDcd05381CAP_PR-1coord: 27..159
e-value: 6.19691E-82
score: 235.991
IPR018244Allergen V5/Tpx-1-related, conserved sitePROSITEPS01009CRISP_1coord: 116..126
IPR018244Allergen V5/Tpx-1-related, conserved sitePROSITEPS01010CRISP_2coord: 142..153

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0014511.1Lag0014511.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005615 extracellular space
cellular_component GO:0005576 extracellular region