Lag0014507 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0014507
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	pathogenesis-related protein-1-like
Location	chr12: 1511571 .. 1512065 (+)
RNA-Seq Expression	Lag0014507
Synteny	Lag0014507

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATATGCCAACTTTCTCTCCCCACTTTGCCTCATAGGACTAGCCCTAACATTAGCTTCCATCTCTCCCGTGGTCGCCACGAAAAGCACCCCGAAGGACTTTGTCGATGCGCACAATGCCGTCCGTGCCGACTATGGCGTTGGCCCGGTCACTTGGAACACTACTCTAGAAGCCTATGCTAAAAATTATGCCAAGACTAGGATTGCTACATGCGAGATGGAACACTCCAATGGACCTTATGGTGAAAACTTAGCCGAGGCATTCGAGACGACAACGGCAGAATTGACCGTGAACTTTTGGGCTAGCGAGAAGAAGTTCTACGATCACAAGTCGAACAAGTGCGTCGATGACGAGTGTGGCCATTTTAGACAGGTTGTGTGGAAGGACACAACATCTATAGGTTGTGCTGAAGTTAAGTGCCAAAACAACTATATTTTCACCATTTGCAACTATTATCCTCCAGGAAACTATCCTGACCAACTTCCTTACTAA

mRNA sequence

ATGGCATATGCCAACTTTCTCTCCCCACTTTGCCTCATAGGACTAGCCCTAACATTAGCTTCCATCTCTCCCGTGGTCGCCACGAAAAGCACCCCGAAGGACTTTGTCGATGCGCACAATGCCGTCCGTGCCGACTATGGCGTTGGCCCGGTCACTTGGAACACTACTCTAGAAGCCTATGCTAAAAATTATGCCAAGACTAGGATTGCTACATGCGAGATGGAACACTCCAATGGACCTTATGGTGAAAACTTAGCCGAGGCATTCGAGACGACAACGGCAGAATTGACCGTGAACTTTTGGGCTAGCGAGAAGAAGTTCTACGATCACAAGTCGAACAAGTGCGTCGATGACGAGTGTGGCCATTTTAGACAGGTTGTGTGGAAGGACACAACATCTATAGGTTGTGCTGAAGTTAAGTGCCAAAACAACTATATTTTCACCATTTGCAACTATTATCCTCCAGGAAACTATCCTGACCAACTTCCTTACTAA

Coding sequence (CDS)

ATGGCATATGCCAACTTTCTCTCCCCACTTTGCCTCATAGGACTAGCCCTAACATTAGCTTCCATCTCTCCCGTGGTCGCCACGAAAAGCACCCCGAAGGACTTTGTCGATGCGCACAATGCCGTCCGTGCCGACTATGGCGTTGGCCCGGTCACTTGGAACACTACTCTAGAAGCCTATGCTAAAAATTATGCCAAGACTAGGATTGCTACATGCGAGATGGAACACTCCAATGGACCTTATGGTGAAAACTTAGCCGAGGCATTCGAGACGACAACGGCAGAATTGACCGTGAACTTTTGGGCTAGCGAGAAGAAGTTCTACGATCACAAGTCGAACAAGTGCGTCGATGACGAGTGTGGCCATTTTAGACAGGTTGTGTGGAAGGACACAACATCTATAGGTTGTGCTGAAGTTAAGTGCCAAAACAACTATATTTTCACCATTTGCAACTATTATCCTCCAGGAAACTATCCTGACCAACTTCCTTACTAA

Protein sequence

MAYANFLSPLCLIGLALTLASISPVVATKSTPKDFVDAHNAVRADYGVGPVTWNTTLEAYAKNYAKTRIATCEMEHSNGPYGENLAEAFETTTAELTVNFWASEKKFYDHKSNKCVDDECGHFRQVVWKDTTSIGCAEVKCQNNYIFTICNYYPPGNYPDQLPY

Homology

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BLAST of Lag0014507 vs. NCBI nr
Match: XP_008455070.1 (PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo] >KAA0031392.1 basic form of pathogenesis-related protein 1-like [Cucumis melo var. makuwa] >TYK06843.1 basic form of pathogenesis-related protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 283.5 bits (724), Expect = 1.2e-72
Identity = 128/159 (80.50%), Postives = 144/159 (90.57%), Query Frame = 0


Query: 6   FLSPLCLIGLALTLASISPVVATKSTPKDFVDAHNAVRADYGVGPVTWNTTLEAYAKNYA 65
           F+S  C++GL+L LA ISP +A KS+P++FVDAHNA+RA YGVGPVTWN TL +YA+NYA
Sbjct: 7   FVSAFCVVGLSLILAPISPTIA-KSSPQEFVDAHNAIRAKYGVGPVTWNKTLASYAENYA 66

Query: 66  KTRIATCEMEHSNGPYGENLAEAFETTTAELTVNFWASEKKFYDHKSNKCVDDECGHFRQ 125
           KTR+ATCEMEHS GPYGENLAEAFE TTAELTVN+WA+E KFYDHKSNKCV++ECGHF Q
Sbjct: 67  KTRVATCEMEHSMGPYGENLAEAFEKTTAELTVNYWATEDKFYDHKSNKCVEEECGHFLQ 126

Query: 126 VVWKDTTSIGCAEVKCQNNYIFTICNYYPPGNYPDQLPY 165
           VVWKDTTSIGCAEVKC NNYIFTICNYYPPG YPDQLPY
Sbjct: 127 VVWKDTTSIGCAEVKCNNNYIFTICNYYPPGGYPDQLPY 164

[Close]

BLAST of Lag0014507 vs. NCBI nr
Match: XP_038888848.1 (basic form of pathogenesis-related protein 1-like [Benincasa hispida] >XP_038888868.1 basic form of pathogenesis-related protein 1-like [Benincasa hispida])

HSP 1 Score: 279.6 bits (714), Expect = 1.7e-71
Identity = 128/158 (81.01%), Postives = 142/158 (89.87%), Query Frame = 0


Query: 7   LSPLCLIGLALTLASISPVVATKSTPKDFVDAHNAVRADYGVGPVTWNTTLEAYAKNYAK 66
           L   C +GL+L LA ISP VA KS+P+DFVDAHNA+RA+YGVGPVTWN TL  YA+ YA+
Sbjct: 8   LFAFCCVGLSLILAPISPTVA-KSSPQDFVDAHNAIRAEYGVGPVTWNKTLAEYAQKYAE 67

Query: 67  TRIATCEMEHSNGPYGENLAEAFETTTAELTVNFWASEKKFYDHKSNKCVDDECGHFRQV 126
           TRIATCEMEHS GPYGENLAEAFETTTAELTVN+WASEKKFY+H++NKCV++ECGHF QV
Sbjct: 68  TRIATCEMEHSMGPYGENLAEAFETTTAELTVNYWASEKKFYNHQANKCVEEECGHFLQV 127

Query: 127 VWKDTTSIGCAEVKCQNNYIFTICNYYPPGNYPDQLPY 165
           VWKDTTSIGCAEVKC NNYIFTICNYYPPG YPDQLPY
Sbjct: 128 VWKDTTSIGCAEVKCNNNYIFTICNYYPPGGYPDQLPY 164

[Close]

BLAST of Lag0014507 vs. NCBI nr
Match: XP_004137079.1 (basic form of pathogenesis-related protein 1 [Cucumis sativus] >KGN43825.1 hypothetical protein Csa_017105 [Cucumis sativus])

HSP 1 Score: 275.4 bits (703), Expect = 3.2e-70
Identity = 125/159 (78.62%), Postives = 139/159 (87.42%), Query Frame = 0


Query: 6   FLSPLCLIGLALTLASISPVVATKSTPKDFVDAHNAVRADYGVGPVTWNTTLEAYAKNYA 65
           F+   C++GL L LA ISP +A  STP+DFVDAHNA+RA YGVGPVTWN T+ +YA+ YA
Sbjct: 7   FVFAFCVVGLFLILAPISPTLA-NSTPQDFVDAHNAIRAKYGVGPVTWNKTIASYAEKYA 66

Query: 66  KTRIATCEMEHSNGPYGENLAEAFETTTAELTVNFWASEKKFYDHKSNKCVDDECGHFRQ 125
           KT+ ATCEMEHS GPYGENLAEAFE TTAELTVN+WASE KFYDHKSNKCV++ECGHF Q
Sbjct: 67  KTKTATCEMEHSMGPYGENLAEAFEKTTAELTVNYWASEDKFYDHKSNKCVEEECGHFLQ 126

Query: 126 VVWKDTTSIGCAEVKCQNNYIFTICNYYPPGNYPDQLPY 165
           +VWKDTTSIGCAEVKC NNYIFTICNYYPPG YPDQLPY
Sbjct: 127 IVWKDTTSIGCAEVKCNNNYIFTICNYYPPGGYPDQLPY 164

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BLAST of Lag0014507 vs. NCBI nr
Match: XP_022148832.1 (basic form of pathogenesis-related protein 1-like [Momordica charantia])

HSP 1 Score: 264.6 bits (675), Expect = 5.6e-67
Identity = 121/166 (72.89%), Postives = 139/166 (83.73%), Query Frame = 0


Query: 1   MAYANFLSPLCLIG--LALTLASISPVVATKSTPKDFVDAHNAVRADYGVGPVTWNTTLE 60
           MA   F+  +CL+G  LALTL   + V   KS+PKDFVDAHN +RA+YGVGPV WNTTL 
Sbjct: 1   MAAPKFVWTVCLVGLTLALTLTLTAIVAVAKSSPKDFVDAHNTIRAEYGVGPVAWNTTLA 60

Query: 61  AYAKNYAKTRIATCEMEHSNGPYGENLAEAFETTTAELTVNFWASEKKFYDHKSNKCVDD 120
            YA+N+AKTR+ TCEMEHS GPYGE+LAEAFE+TTAE TV +WASEK+FYDHK+NKCV+D
Sbjct: 61  DYAENFAKTRVDTCEMEHSMGPYGESLAEAFESTTAEATVKYWASEKEFYDHKANKCVND 120

Query: 121 ECGHFRQVVWKDTTSIGCAEVKCQNNYIFTICNYYPPGNYPDQLPY 165
           ECGHF  VVWKDT  IGCAEVKC+NNYIFTICNY+PPG YPDQLPY
Sbjct: 121 ECGHFLNVVWKDTKYIGCAEVKCKNNYIFTICNYFPPGGYPDQLPY 166

[Close]

BLAST of Lag0014507 vs. NCBI nr
Match: XP_022972465.1 (basic form of pathogenesis-related protein 1-like [Cucurbita maxima])

HSP 1 Score: 260.0 bits (663), Expect = 1.4e-65
Identity = 118/157 (75.16%), Postives = 140/157 (89.17%), Query Frame = 0


Query: 8   SPLCLIGLALTLASISPVVATKSTPKDFVDAHNAVRADYGVGPVTWNTTLEAYAKNYAKT 67
           SP+  +GLAL LASISP VA KSTPK+FVDAHNAVRA+YGVGPV+WNTTL A A+ +A+T
Sbjct: 3   SPIWFVGLALILASISPTVA-KSTPKEFVDAHNAVRANYGVGPVSWNTTLAADARTFART 62

Query: 68  RIATCEMEHSNGPYGENLAEAFETTTAELTVNFWASEKKFYDHKSNKCVDDECGHFRQVV 127
            + TCEM +SNGPYGEN+A A+E TTAELTVN+WASEKKFY++KSNKCV++ECGHFRQVV
Sbjct: 63  MMGTCEMVYSNGPYGENMALAYEKTTAELTVNYWASEKKFYEYKSNKCVEEECGHFRQVV 122

Query: 128 WKDTTSIGCAEVKCQNNYIFTICNYYPPGNYPDQLPY 165
           WKDTTSIGCAE++C  +YI T+CNYYPPGNY +QLPY
Sbjct: 123 WKDTTSIGCAEIECIKDYILTVCNYYPPGNYANQLPY 158

[Close]

BLAST of Lag0014507 vs. ExPASy Swiss-Prot
Match: P11670 (Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 1.4e-39
Identity = 71/153 (46.41%), Postives = 97/153 (63.40%), Query Frame = 0


Query: 12  LIGLALTLASISPVVATKSTPKDFVDAHNAVRADYGVGPVTWNTTLEAYAKNYAKTRIAT 71
           ++   +T A +      +++P+D+++ HNA R   GVGP+TW+  L AYA+NYA  RI  
Sbjct: 7   IVACFITFAILIHSSKAQNSPQDYLNPHNAARRQVGVGPMTWDNRLAAYAQNYANQRIGD 66

Query: 72  CEMEHSNGPYGENLAEAFETTTAELTVNFWASEKKFYDHKSNKCVDDECGHFRQVVWKDT 131
           C M HS+GPYGENLA AF    A   V  W  EK+FYD+ SN CV   CGH+ QVVW+++
Sbjct: 67  CGMIHSHGPYGENLAAAFPQLNAAGAVKMWVDEKRFYDYNSNSCVGGVCGHYTQVVWRNS 126

Query: 132 TSIGCAEVKCQNNYIFTICNYYPPGNYPDQLPY 165
             +GCA V+  N + F  CNY PPGN+  Q P+
Sbjct: 127 VRLGCARVRSNNGWFFITCNYDPPGNFIGQRPF 159

[Close]

BLAST of Lag0014507 vs. ExPASy Swiss-Prot
Match: Q08697 (Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 6.9e-36
Identity = 68/134 (50.75%), Postives = 89/134 (66.42%), Query Frame = 0


Query: 31  TPKD-FVDAHNAVRADYGVGPVTWNTTLEAYAKNYAKTRIATCEMEHSNGPYGENLAEAF 90
           TP++ F++AHNA R   GVGP+TW+  L AYA+NYA  R   C M HS+GPYGENLA AF
Sbjct: 23  TPRENFLNAHNAARRRVGVGPMTWDDGLAAYAQNYANQRADDCGMIHSDGPYGENLAAAF 82

Query: 91  ETTTAELTVNFWASEKKFYDHKSNKCVDDE-CGHFRQVVWKDTTSIGCAEVKCQNNYIFT 150
               A   V  W  EK++YD+ SN C   + CGH+ QVVW+ +  +GCA V+C + ++F 
Sbjct: 83  PQLNAAGAVKMWDDEKQWYDYNSNTCAPGKVCGHYTQVVWRKSVRLGCARVRCNSGWVFI 142

Query: 151 ICNYYPPGNYPDQL 163
            CNY PPGNY D +
Sbjct: 143 TCNYDPPGNYIDNV 156

[Close]

BLAST of Lag0014507 vs. ExPASy Swiss-Prot
Match: P08299 (Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.2e-35
Identity = 71/160 (44.38%), Postives = 96/160 (60.00%), Query Frame = 0


Query: 7   LSPLCLIGLALTLASISPVVATKSTPKDFVDAHNAVRADYGVGPVTWNTTLEAYAKNYAK 66
           L    L+   L    IS     +++ +D++DAHN  RAD GV P+TW+  + AYA+NYA 
Sbjct: 9   LPSFLLVSTLLLFLVISHSCRAQNSQQDYLDAHNTARADVGVEPLTWDDQVAAYAQNYAS 68

Query: 67  TRIATCEMEHSNGPYGENLAE-AFETTTAELTVNFWASEKKFYDHKSNKCVDDE-CGHFR 126
              A C + HS+G YGENLAE + +  TA   V  W  EK++YDH SN C   + CGH+ 
Sbjct: 69  QLAADCNLVHSHGQYGENLAEGSGDFMTAAKAVEMWVDEKQYYDHDSNTCAQGQVCGHYT 128

Query: 127 QVVWKDTTSIGCAEVKCQNNYIFTICNYYPPGNYPDQLPY 165
           QVVW+++  +GCA V+C N      CNY PPGNY  + PY
Sbjct: 129 QVVWRNSVRVGCARVQCNNGGYVVSCNYDPPGNYRGESPY 168

[Close]

BLAST of Lag0014507 vs. ExPASy Swiss-Prot
Match: P35793 (Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 1.5e-35
Identity = 76/157 (48.41%), Postives = 102/157 (64.97%), Query Frame = 0


Query: 12  LIGLALTLASISPVVATKSTPKDFVDAHNAVRADYGVGPVTWNTTLEAYAKNYAKTRIAT 71
           L+ LA++ A ++ +   +++P+D+V  HNA RA  GVG V+W+T L+A+A+NYA  RI  
Sbjct: 9   LLALAMSAAMVN-LSQAQNSPQDYVSPHNAARAAVGVGAVSWSTKLQAFAQNYANQRIND 68

Query: 72  CEMEHSNGPYGENL--AEAFETTTAELTVNFWASEKKFYDHKSNKCVDDE-CGHFRQVVW 131
           C+++HS GPYGEN+    A     A   VN W SEKK YD+ SN C   + CGH+ QVVW
Sbjct: 69  CKLQHSGGPYGENIFWGSAGADWKASDAVNSWVSEKKDYDYGSNTCAAGKVCGHYTQVVW 128

Query: 132 KDTTSIGCAEVKCQNNY-IFTICNYYPPGNYPDQLPY 165
           + +TSIGCA V C NN  +F  CNY P GN   Q PY
Sbjct: 129 RASTSIGCARVVCNNNRGVFITCNYEPRGNIVGQKPY 164

[Close]

BLAST of Lag0014507 vs. ExPASy Swiss-Prot
Match: Q05968 (Pathogenesis-related protein 1 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 5.9e-35
Identity = 75/157 (47.77%), Postives = 101/157 (64.33%), Query Frame = 0


Query: 12  LIGLALTLASISPVVATKSTPKDFVDAHNAVRADYGVGPVTWNTTLEAYAKNYAKTRIAT 71
           L+ LA+  A ++ +   +++P+D+V  HNA R+  GVG V+W+T L+A+A+NYA  RI  
Sbjct: 9   LLALAMAAAMVN-LSQAQNSPQDYVSPHNAARSAVGVGAVSWSTKLQAFAQNYANQRIND 68

Query: 72  CEMEHSNGPYGENL--AEAFETTTAELTVNFWASEKKFYDHKSNKCVDDE-CGHFRQVVW 131
           C+++HS GPYGEN+    A     A   VN W SEKK YD+ SN C   + CGH+ QVVW
Sbjct: 69  CKLQHSGGPYGENIFWGSAGADWKASDAVNSWVSEKKDYDYGSNTCAAGKVCGHYTQVVW 128

Query: 132 KDTTSIGCAEVKCQNNY-IFTICNYYPPGNYPDQLPY 165
           + +TSIGCA V C NN  +F  CNY P GN   Q PY
Sbjct: 129 RASTSIGCARVVCNNNRGVFITCNYEPRGNIIGQKPY 164

The following BLAST results are available for this feature:

BLAST of Lag0014507 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008455070.1	1.2e-72	80.50	PREDICTED: basic form of pathogenesis-related protein 1-like [Cucumis melo] >KAA...	[more]
XP_038888848.1	1.7e-71	81.01	basic form of pathogenesis-related protein 1-like [Benincasa hispida] >XP_038888...	[more]
XP_004137079.1	3.2e-70	78.62	basic form of pathogenesis-related protein 1 [Cucumis sativus] >KGN43825.1 hypot...	[more]
XP_022148832.1	5.6e-67	72.89	basic form of pathogenesis-related protein 1-like [Momordica charantia]	[more]
XP_022972465.1	1.4e-65	75.16	basic form of pathogenesis-related protein 1-like [Cucurbita maxima]	[more]

BLAST of Lag0014507 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P11670	1.4e-39	46.41	Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum OX=4097 PE=3 S...	[more]
Q08697	6.9e-36	50.75	Pathogenesis-related protein 1A1 OS=Solanum lycopersicum OX=4081 PE=2 SV=1	[more]
P08299	1.2e-35	44.38	Pathogenesis-related protein 1A OS=Nicotiana tabacum OX=4097 PE=1 SV=1	[more]
P35793	1.5e-35	48.41	Pathogenesis-related protein PRB1-3 OS=Hordeum vulgare OX=4513 PE=2 SV=1	[more]
Q05968	5.9e-35	47.77	Pathogenesis-related protein 1 OS=Hordeum vulgare OX=4513 PE=2 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001283	Cysteine-rich secretory protein-related	PRINTS	PR00837	V5TPXLIKE	coord: 51..69 score: 33.52 coord: 120..136 score: 52.69 coord: 97..110 score: 32.03 coord: 147..160 score: 46.62
IPR001283	Cysteine-rich secretory protein-related	PANTHER	PTHR10334	CYSTEINE-RICH SECRETORY PROTEIN-RELATED	coord: 22..164
IPR014044	CAP domain	SMART	SM00198	SCP_3	coord: 30..160 e-value: 2.8E-48 score: 176.4
IPR014044	CAP domain	PFAM	PF00188	CAP	coord: 36..152 e-value: 1.3E-23 score: 84.2
IPR035940	CAP superfamily	GENE3D	3.40.33.10	CAP	coord: 25..164 e-value: 9.2E-42 score: 144.7
IPR035940	CAP superfamily	SUPERFAMILY	55797	PR-1-like	coord: 28..164
None	No IPR available	PANTHER	PTHR10334:SF469	PATHOGENESIS-RELATED PROTEIN 1B	coord: 22..164
None	No IPR available	CDD	cd05381	CAP_PR-1	coord: 32..164 e-value: 6.86819E-72 score: 210.953

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0014507.1	Lag0014507.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009607	response to biotic stimulus
cellular_component	GO:0005615	extracellular space