Lag0013842 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTCCGATTTCTGGACCTCTCGCCTCGCCGCCGCCAAACGCCAGTATATGTGGCAGCATCATCACCAGACCTCCAATTTAGGTTTTCCCTCGCTTCTCTTTTCATTTTCTCATCTATCTTCCTTTTTCTTTCTTTCTCACCCCTCTCTTCTCCTTGCTTCCTTTGCTTTCCTTTAGATCTATTGGGAATCGACGATTTGGAGATGGATGAGGACGCCCGCCCCCATTTTCCTTGCCCTTTTTGCTATGAGAATTTTGACGTTATGTCCCTTTGTTCGCATCTCGAAGACGAGCACTCTTGCGAGACAAGAGTCACGGTATGTATTTTCCCTTCCAATTCTATATATGATTCACCTGGGACTGGGTCATGCAAGTATGGTTTTTTCTAAATGCTATTACTATTGTTTCCCTCGTTGCTGACACCTGCTTCTCGATATATTCTATTGTTTCATGTTCAGCGTTTCTAGCCGCTTAGGTTCTTGAGAGTTTCTAGCAATTGTTGTTTAGATTTTGAGATTACAGAAATGATTTTCTGTCTAATTCATGAGAGTTCGTAGAAATGATTGTTTAGGACACATGCTGTTATAGTGCTGCCAATCTTTGGTAGTTGTTTTAGGTTAATCTTCCATTTGATTGTCTAAAAGTTCCGTTTCGTTGTGAAATTATTTTCTCCTTTCCCATTATTCGTTGAGATCCTTGAAGTAATAGAACGAAACTGCGAGGAGAATTAAACTTGTTCAGCATCATCTTCTATAAGCTCTCTCTGTTTCTTGCGCCTCTCTTATTCTGCACTTTTAGGTTATTGGTTCGTGAGAAATAAGGTTCCTGCTTAATTTGCATTTTCCTTGCAGGTTTGCCCCATATGCTCAGTTAAAGTCATGGGGGACATGTTGAGTCATATAACGTTGCATCATGGGCACTTATACAAGATATCCTTTAAATTTGATACTCGTTTTTACTGACTACTACCATTTAAGTGGTATGTTTTGAGGAAATTGATAGTTCTACTATGCCCATCTTGTTTGCTTAACAAAGGATCACCTTCAGAGACGTCGCAGGTTGCGTAAAATTGCCATCCCCAACAGCCAGGCGTTGTCCCTCTTGAGCCGGGACCTTCGTGAGGCTCATCTACAGGTGCTTTTAGGGAGCAGTGGATACCGTACAAGCACCACTAATGTGCCTAGTGCAACTCATGATCCGTTTCTTTCATCACTCATTTTAAATTATCCTGCCTCTGAAGTTGAAGATATCTCAAAATCCATGCTAACCAGTGCCGAAGAGACATCTTCAGAGAACGTGGCACCTTCGCCTATTTGGAAATCGAGGTACTTGTTTGCATCCCTTTCTTTTTCTTTCTATTTCCTTTTAGAGTAATGGATTTCTCTCTTATTGATATTCCTCAAGCCACTAGTGTGTTTGTTTGTTTATCAAAAGGGGTTTGGTTAGATCAGGAAACTGTTATGCCTTTCCATTCCCTTATATGCCATGACTGAAAAGTCCCTATGCTTTAATCCAATCCAAGTAATTCCATCGGCCTTTACAAGTACTCATCTCTGGTCATAAGGTAAGAGAAATTTTCCTTGATGACCATAGCCAAGTAACAGATATCTGCCTATTTTGCATTTGCCGGAGGAATTAATGTGTCACACCCTCTGATTATCTCTTCCTGTTGTTTAGTATTAACACTTCTCTCCCTCTCTCCAGTTTTGATCCTTCTTTGAGCCAGGAAGAGCGGGAAAAAAGGATGAGGCAGGCTATTGGGAGAGCAGGCTTTATGCGAGATATGCTTTTCTCAACTCTCTTAGACGATTAATGAAAGCTGTAAGTTGCTGCTACAAAATGATGCAAAAATGAATAAATTAACAGATATTGAATTACTTCTTGGTTTGATTCATATAGCTTTATTTGTTGTCGACCCATTATCAAACTCATTGAGGTCAAACACTCTTTGAGTATTGGTTGATGATAACATCCTTCATTATAACCAGTGAATGGATTGCATTGAATATAAAACCGTCTGTTTATTTATTGATATTTTAATTGTACAATACTGTGGTTGTGTTGCAAGAAGAATTTGAATGTAAACATTTCAGAATAGTGAACGACAAAAGGGGAGCATTATGCTCATTGGCACTCGAGGGTCGGTCGGCCAGGACCAGGAGCCACACCATACACCATACGAGGAGAAATTTGAAGGGAAACTTCGATGGTCAACACTGCTTCGGAATCTCCCATTGAATGGCAACACTATTGGGACTGGGCCTGAGGCTACTTCCAAGGAAATTATCAATGCTTTCTTTTTAAACCTTCTCTTTTCATTTTGA ATGGATTCCGATTTCTGGACCTCTCGCCTCGCCGCCGCCAAACGCCAGTATATGTGGCAGCATCATCACCAGACCTCCAATTTAGATCTATTGGGAATCGACGATTTGGAGATGGATGAGGACGCCCGCCCCCATTTTCCTTGCCCTTTTTGCTATGAGAATTTTGACGTTATGTCCCTTTGTTCGCATCTCGAAGACGAGCACTCTTGCGAGACAAGAGTCACGGATCACCTTCAGAGACGTCGCAGGTTGCGTAAAATTGCCATCCCCAACAGCCAGGCGTTGTCCCTCTTGAGCCGGGACCTTCGTGAGGCTCATCTACAGGTGCTTTTAGGGAGCAGTGGATACCGTACAAGCACCACTAATGTGCCTAGTGCAACTCATGATCCGTTTCTTTCATCACTCATTTTAAATTATCCTGCCTCTGAAGTTGAAGATATCTCAAAATCCATGCTAACCAGTGCCGAAGAGACATCTTCAGAGAACGTGGCACCTTCGCCTATTTGGAAATCGAGAGCGGGAAAAAAGGATGAGGCAGGCTATTGGGAGAGCAGGCTTTATGCGAGATATGCTTTTCTCAACTCTCTTAGACGATTAATGAAAGCTAATAGTGAACGACAAAAGGGGAGCATTATGCTCATTGGCACTCGAGGGTCGGTCGGCCAGGACCAGGAGCCACACCATACACCATACGAGGAGAAATTTGAAGGGAAACTTCGATGGTCAACACTGCTTCGGAATCTCCCATTGAATGGCAACACTATTGGGACTGGGCCTGAGGCTACTTCCAAGGAAATTATCAATGCTTTCTTTTTAAACCTTCTCTTTTCATTTTGA ATGGATTCCGATTTCTGGACCTCTCGCCTCGCCGCCGCCAAACGCCAGTATATGTGGCAGCATCATCACCAGACCTCCAATTTAGATCTATTGGGAATCGACGATTTGGAGATGGATGAGGACGCCCGCCCCCATTTTCCTTGCCCTTTTTGCTATGAGAATTTTGACGTTATGTCCCTTTGTTCGCATCTCGAAGACGAGCACTCTTGCGAGACAAGAGTCACGGATCACCTTCAGAGACGTCGCAGGTTGCGTAAAATTGCCATCCCCAACAGCCAGGCGTTGTCCCTCTTGAGCCGGGACCTTCGTGAGGCTCATCTACAGGTGCTTTTAGGGAGCAGTGGATACCGTACAAGCACCACTAATGTGCCTAGTGCAACTCATGATCCGTTTCTTTCATCACTCATTTTAAATTATCCTGCCTCTGAAGTTGAAGATATCTCAAAATCCATGCTAACCAGTGCCGAAGAGACATCTTCAGAGAACGTGGCACCTTCGCCTATTTGGAAATCGAGAGCGGGAAAAAAGGATGAGGCAGGCTATTGGGAGAGCAGGCTTTATGCGAGATATGCTTTTCTCAACTCTCTTAGACGATTAATGAAAGCTAATAGTGAACGACAAAAGGGGAGCATTATGCTCATTGGCACTCGAGGGTCGGTCGGCCAGGACCAGGAGCCACACCATACACCATACGAGGAGAAATTTGAAGGGAAACTTCGATGGTCAACACTGCTTCGGAATCTCCCATTGAATGGCAACACTATTGGGACTGGGCCTGAGGCTACTTCCAAGGAAATTATCAATGCTTTCTTTTTAAACCTTCTCTTTTCATTTTGA MDSDFWTSRLAAAKRQYMWQHHHQTSNLDLLGIDDLEMDEDARPHFPCPFCYENFDVMSLCSHLEDEHSCETRVTDHLQRRRRLRKIAIPNSQALSLLSRDLREAHLQVLLGSSGYRTSTTNVPSATHDPFLSSLILNYPASEVEDISKSMLTSAEETSSENVAPSPIWKSRAGKKDEAGYWESRLYARYAFLNSLRRLMKANSERQKGSIMLIGTRGSVGQDQEPHHTPYEEKFEGKLRWSTLLRNLPLNGNTIGTGPEATSKEIINAFFLNLLFSF Homology
BLAST of Lag0013842 vs. NCBI nr
Match: KAA0052670.1 (protein DEHYDRATION-INDUCED 19-like protein 4-like isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 392.1 bits (1006), Expect = 3.9e-105 Identity = 207/275 (75.27%), Postives = 215/275 (78.18%), Query Frame = 0
BLAST of Lag0013842 vs. NCBI nr
Match: TYK13154.1 (protein DEHYDRATION-INDUCED 19-like protein 4-like isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 386.0 bits (990), Expect = 2.8e-103 Identity = 205/272 (75.37%), Postives = 213/272 (78.31%), Query Frame = 0
BLAST of Lag0013842 vs. NCBI nr
Match: XP_038882149.1 (protein DEHYDRATION-INDUCED 19-like isoform X2 [Benincasa hispida]) HSP 1 Score: 328.9 bits (842), Expect = 4.1e-86 Identity = 180/258 (69.77%), Postives = 188/258 (72.87%), Query Frame = 0
BLAST of Lag0013842 vs. NCBI nr
Match: KAG7026560.1 (Protein DEHYDRATION-INDUCED 19, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 325.5 bits (833), Expect = 4.5e-85 Identity = 163/185 (88.11%), Postives = 165/185 (89.19%), Query Frame = 0
BLAST of Lag0013842 vs. NCBI nr
Match: XP_038882145.1 (protein DEHYDRATION-INDUCED 19-like isoform X1 [Benincasa hispida] >XP_038882146.1 protein DEHYDRATION-INDUCED 19-like isoform X1 [Benincasa hispida] >XP_038882148.1 protein DEHYDRATION-INDUCED 19-like isoform X1 [Benincasa hispida]) HSP 1 Score: 317.8 bits (813), Expect = 9.5e-83 Identity = 165/195 (84.62%), Postives = 168/195 (86.15%), Query Frame = 0
BLAST of Lag0013842 vs. ExPASy Swiss-Prot
Match: Q6H6E6 (Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Oryza sativa subsp. japonica OX=39947 GN=DI19-4 PE=2 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 3.7e-37 Identity = 95/210 (45.24%), Postives = 122/210 (58.10%), Query Frame = 0
BLAST of Lag0013842 vs. ExPASy Swiss-Prot
Match: Q688X9 (Protein DEHYDRATION-INDUCED 19 OS=Oryza sativa subsp. japonica OX=39947 GN=DI19-1 PE=2 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 2.0e-35 Identity = 86/194 (44.33%), Postives = 119/194 (61.34%), Query Frame = 0
BLAST of Lag0013842 vs. ExPASy Swiss-Prot
Match: Q5QMP3 (Protein DEHYDRATION-INDUCED 19 homolog 3 OS=Oryza sativa subsp. japonica OX=39947 GN=DI19-3 PE=2 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 1.8e-23 Identity = 76/212 (35.85%), Postives = 110/212 (51.89%), Query Frame = 0
BLAST of Lag0013842 vs. ExPASy Swiss-Prot
Match: Q5W794 (Protein DEHYDRATION-INDUCED 19 homolog 2 OS=Oryza sativa subsp. japonica OX=39947 GN=DI19-2 PE=2 SV=2) HSP 1 Score: 88.6 bits (218), Expect = 1.2e-16 Identity = 61/162 (37.65%), Postives = 86/162 (53.09%), Query Frame = 0
BLAST of Lag0013842 vs. ExPASy Swiss-Prot
Match: Q8VXU6 (Protein DEHYDRATION-INDUCED 19 homolog 4 OS=Arabidopsis thaliana OX=3702 GN=DI19-4 PE=1 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 8.8e-15 Identity = 57/157 (36.31%), Postives = 81/157 (51.59%), Query Frame = 0
BLAST of Lag0013842 vs. ExPASy TrEMBL
Match: A0A5A7UBX9 (Protein DEHYDRATION-INDUCED 19-like protein 4-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold120G002810 PE=3 SV=1) HSP 1 Score: 392.1 bits (1006), Expect = 1.9e-105 Identity = 207/275 (75.27%), Postives = 215/275 (78.18%), Query Frame = 0
BLAST of Lag0013842 vs. ExPASy TrEMBL
Match: A0A5D3CQ52 (Protein DEHYDRATION-INDUCED 19-like protein 4-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G007660 PE=3 SV=1) HSP 1 Score: 386.0 bits (990), Expect = 1.4e-103 Identity = 205/272 (75.37%), Postives = 213/272 (78.31%), Query Frame = 0
BLAST of Lag0013842 vs. ExPASy TrEMBL
Match: A0A0A0KK83 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G518060 PE=3 SV=1) HSP 1 Score: 313.2 bits (801), Expect = 1.1e-81 Identity = 162/195 (83.08%), Postives = 166/195 (85.13%), Query Frame = 0
BLAST of Lag0013842 vs. ExPASy TrEMBL
Match: A0A1S4DTM1 (protein DEHYDRATION-INDUCED 19 homolog 4-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484501 PE=3 SV=1) HSP 1 Score: 313.2 bits (801), Expect = 1.1e-81 Identity = 163/199 (81.91%), Postives = 167/199 (83.92%), Query Frame = 0
BLAST of Lag0013842 vs. ExPASy TrEMBL
Match: A0A6J1KNY5 (protein DEHYDRATION-INDUCED 19-like OS=Cucurbita maxima OX=3661 GN=LOC111496976 PE=3 SV=1) HSP 1 Score: 311.2 bits (796), Expect = 4.3e-81 Identity = 160/195 (82.05%), Postives = 163/195 (83.59%), Query Frame = 0
BLAST of Lag0013842 vs. TAIR 10
Match: AT3G06760.1 (Drought-responsive family protein ) HSP 1 Score: 82.4 bits (202), Expect = 6.2e-16 Identity = 57/157 (36.31%), Postives = 81/157 (51.59%), Query Frame = 0
BLAST of Lag0013842 vs. TAIR 10
Match: AT3G05700.1 (Drought-responsive family protein ) HSP 1 Score: 77.0 bits (188), Expect = 2.6e-14 Identity = 47/160 (29.38%), Postives = 79/160 (49.38%), Query Frame = 0
BLAST of Lag0013842 vs. TAIR 10
Match: AT5G26990.1 (Drought-responsive family protein ) HSP 1 Score: 75.5 bits (184), Expect = 7.6e-14 Identity = 58/203 (28.57%), Postives = 103/203 (50.74%), Query Frame = 0
BLAST of Lag0013842 vs. TAIR 10
Match: AT1G56280.2 (drought-induced 19 ) HSP 1 Score: 74.7 bits (182), Expect = 1.3e-13 Identity = 44/124 (35.48%), Postives = 69/124 (55.65%), Query Frame = 0
BLAST of Lag0013842 vs. TAIR 10
Match: AT1G56280.1 (drought-induced 19 ) HSP 1 Score: 74.3 bits (181), Expect = 1.7e-13 Identity = 44/125 (35.20%), Postives = 69/125 (55.20%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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