Lag0013544 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0013544
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionDUF1990 domain-containing protein
Locationchr1: 51141368 .. 51142715 (+)
RNA-Seq ExpressionLag0013544
SyntenyLag0013544
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTCTTCTTGTGTTGGTCTCGCCCATCTCCTCAAGAGCAGAAGGCTTGCATTGACAAGTAAGAATGATAGGATAATTACCCCCCACCCCCACCGGAAAAGAAAAAAAAAAGGAAAAAGAACACACTGATCTCTCTTTTTTTTTAAGTGGAATGTTACATTTGTGTTCATCAATAGGTCTGGTTCCTTCAACTATAGCAGCAAGTTTAGAGGAGCTACTGCTAATCCCAGCTCTTGCCTTCAAGAAGATAAGGGGCTCTCACAAGAAGGTTTTCTTCTCAACCATGCTCGTACTTTGGTGGGTTCTGGTGTTGAGACTTATGAAAAGGGGAAGAAAGCTCTTCAGAACTGGAGGTTGGATGCATACTTTTTGGTTGAAGAGTAACCAATTAAACGAGAAATGTTAGTCTTATCCGTGCAAATTTTGCAGGCATTTTGGATTGAATTGGGCATTTGTTGATTCCTCGACTCCCATTCATCCGGGAGTGAAGTTTTGTGTCTGTACCAAGGAGTTCCTTCCTTGGGTGGTGTTGCCTCTTCAAATTTTATATGTAAATGAGAACAGGGATACCAAGATGGCTAGAACATGTTTCAGTTTTGGCAGCGGTACCCTTCAAGGCCATCTTCTGGTTAGTTGTTCTTTCTTGATCTTTCTTTCTTTTTTTTCCCTCATTTTCTTGTAGCTTACCTACAGACCATTTTCTTGCAAAGAATCAGCCATGGATTGTGAAATAAGAGTTAGTATTTCATGCAATTTTATCTTAGTGGTGTGATTTTTAAATTGTTTAATGTCTTTTCTGGATGACTCGGATGTAAACTTTGATTGAATTCTCTCATTGGACTTGGTGGGTTAAGATGTTTGAAATTTCTTTTGGTTTTCTTCGATGATTAAGACATAAGGTATCAACTTAGGTATGAAGCACACCAAACTCCAAAATACCAAGTCTTCAACTAGACTATCTGCATATCCTCAGATAACACAGTCTATCATTCATTTCTTCCAAGCTTAAAACATTTTGTTCTTTTCTAACTTCTATTTTTTCTTTTATCTATACTTTCTTCTATTTGTGTACTTGATAGTCAGGTTTTAAACCCACTTTTGGATCCTATAAATGCCAAGTGTGATTAATGTGATCTTGAAATCTCACAAATTCAGGCCGGTGAAGAGCGCTTTTCAATTGAGATGGACAAGAACAGCCAGGTGTGGTATGAAATTCTTTCATTCTCTAAGCCTGCACACATTTTATCATTCCTTAGTTATCCCTATGTAGTTCTTCGGCAAAAGTACTTTGCTTATCAATCTACAAATGCAGTTAAGAAATATCTGACGACTGTTAATCATTCCTAA

mRNA sequence

ATGGTCTTCTTGTGTTGGTCTCGCCCATCTCCTCAAGAGCAGAAGGCTTGCATTGACAAGTCTGGTTCCTTCAACTATAGCAGCAAGTTTAGAGGAGCTACTGCTAATCCCAGCTCTTGCCTTCAAGAAGATAAGGGGCTCTCACAAGAAGGTTTTCTTCTCAACCATGCTCGTACTTTGGTGGGTTCTGGTGTTGAGACTTATGAAAAGGGGAAGAAAGCTCTTCAGAACTGGAGGCATTTTGGATTGAATTGGGCATTTGTTGATTCCTCGACTCCCATTCATCCGGGAGTGAAGTTTTGTGTCTGTACCAAGGAGTTCCTTCCTTGGGTGGTGTTGCCTCTTCAAATTTTATATGTAAATGAGAACAGGGATACCAAGATGGCTAGAACATGTTTCAGTTTTGGCAGCGGTACCCTTCAAGGCCATCTTCTGGCCGGTGAAGAGCGCTTTTCAATTGAGATGGACAAGAACAGCCAGGTGTGGTATGAAATTCTTTCATTCTCTAAGCCTGCACACATTTTATCATTCCTTAGTTATCCCTATGTAGTTCTTCGGCAAAAGTACTTTGCTTATCAATCTACAAATGCAGTTAAGAAATATCTGACGACTGTTAATCATTCCTAA

Coding sequence (CDS)

ATGGTCTTCTTGTGTTGGTCTCGCCCATCTCCTCAAGAGCAGAAGGCTTGCATTGACAAGTCTGGTTCCTTCAACTATAGCAGCAAGTTTAGAGGAGCTACTGCTAATCCCAGCTCTTGCCTTCAAGAAGATAAGGGGCTCTCACAAGAAGGTTTTCTTCTCAACCATGCTCGTACTTTGGTGGGTTCTGGTGTTGAGACTTATGAAAAGGGGAAGAAAGCTCTTCAGAACTGGAGGCATTTTGGATTGAATTGGGCATTTGTTGATTCCTCGACTCCCATTCATCCGGGAGTGAAGTTTTGTGTCTGTACCAAGGAGTTCCTTCCTTGGGTGGTGTTGCCTCTTCAAATTTTATATGTAAATGAGAACAGGGATACCAAGATGGCTAGAACATGTTTCAGTTTTGGCAGCGGTACCCTTCAAGGCCATCTTCTGGCCGGTGAAGAGCGCTTTTCAATTGAGATGGACAAGAACAGCCAGGTGTGGTATGAAATTCTTTCATTCTCTAAGCCTGCACACATTTTATCATTCCTTAGTTATCCCTATGTAGTTCTTCGGCAAAAGTACTTTGCTTATCAATCTACAAATGCAGTTAAGAAATATCTGACGACTGTTAATCATTCCTAA

Protein sequence

MVFLCWSRPSPQEQKACIDKSGSFNYSSKFRGATANPSSCLQEDKGLSQEGFLLNHARTLVGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPIHPGVKFCVCTKEFLPWVVLPLQILYVNENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNSQVWYEILSFSKPAHILSFLSYPYVVLRQKYFAYQSTNAVKKYLTTVNHS
Homology
BLAST of Lag0013544 vs. NCBI nr
Match: XP_022950650.1 (UPF0548 protein At2g17695 [Cucurbita moschata] >XP_023543885.1 UPF0548 protein At2g17695 [Cucurbita pepo subsp. pepo] >XP_023543886.1 UPF0548 protein At2g17695 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 411.4 bits (1056), Expect = 4.7e-111
Identity = 192/203 (94.58%), Postives = 197/203 (97.04%), Query Frame = 0

Query: 1   MVFLCWSRPSPQEQKACIDKSGSFNYSSKFRGATANPSSCLQEDKGLSQEGFLLNHARTL 60
           MVFLCWSRPSPQEQK CID+SGSFNYSSKFRGATANPSSCLQEDKGLSQEGFLLNHAR L
Sbjct: 1   MVFLCWSRPSPQEQKTCIDRSGSFNYSSKFRGATANPSSCLQEDKGLSQEGFLLNHARIL 60

Query: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPIHPGVKFCVCTKEFLPWVVLPLQILYV 120
           VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTP+HPGVKFCVC KEFLPWVV+PLQI+YV
Sbjct: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVMPLQIVYV 120

Query: 121 NENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNSQVWYEILSFSKPAHILSFLSY 180
           NENR T MARTCFSFGSGTLQGHLLAGEERFSIEMD NSQVWYEILSFSKPAHILSFLSY
Sbjct: 121 NENRGTNMARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSY 180

Query: 181 PYVVLRQKYFAYQSTNAVKKYLT 204
           PYV+LRQKYFAYQSTNAVKKYLT
Sbjct: 181 PYVILRQKYFAYQSTNAVKKYLT 203

BLAST of Lag0013544 vs. NCBI nr
Match: XP_022979037.1 (UPF0548 protein At2g17695 [Cucurbita maxima])

HSP 1 Score: 411.0 bits (1055), Expect = 6.1e-111
Identity = 191/203 (94.09%), Postives = 197/203 (97.04%), Query Frame = 0

Query: 1   MVFLCWSRPSPQEQKACIDKSGSFNYSSKFRGATANPSSCLQEDKGLSQEGFLLNHARTL 60
           MVFLCWSRPSPQEQK CID+SGSFNYSSKFRGATANPSSCLQEDKGLSQEGFLLNHAR L
Sbjct: 1   MVFLCWSRPSPQEQKTCIDRSGSFNYSSKFRGATANPSSCLQEDKGLSQEGFLLNHARIL 60

Query: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPIHPGVKFCVCTKEFLPWVVLPLQILYV 120
           VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTP+HPGVKFCVC KEFLPWVV+PLQI+YV
Sbjct: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVMPLQIVYV 120

Query: 121 NENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNSQVWYEILSFSKPAHILSFLSY 180
           NENR T MARTCFSFGSGTLQGHLLAGEERFSIEMD NSQVWYEILSFSKPAHILSFLSY
Sbjct: 121 NENRGTNMARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSY 180

Query: 181 PYVVLRQKYFAYQSTNAVKKYLT 204
           PY++LRQKYFAYQSTNAVKKYLT
Sbjct: 181 PYIILRQKYFAYQSTNAVKKYLT 203

BLAST of Lag0013544 vs. NCBI nr
Match: XP_038883220.1 (UPF0548 protein At2g17695 isoform X1 [Benincasa hispida] >XP_038883221.1 UPF0548 protein At2g17695 isoform X1 [Benincasa hispida])

HSP 1 Score: 402.1 bits (1032), Expect = 2.9e-108
Identity = 186/206 (90.29%), Postives = 197/206 (95.63%), Query Frame = 0

Query: 1   MVFLCWSRPSPQEQKACIDKSGSFNYSSKFRGATANPSSCLQEDKGLSQEGFLLNHARTL 60
           MVFLCWSRPSPQ+QKACI+++GSFNYSSKFRGATANPS+CLQED G+SQEGFLLNHAR L
Sbjct: 1   MVFLCWSRPSPQDQKACIERAGSFNYSSKFRGATANPSTCLQEDNGISQEGFLLNHARIL 60

Query: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPIHPGVKFCVCTKEFLPWVVLPLQILYV 120
           VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTP+HPGVKFCVC KEFLPWVVLPLQI+YV
Sbjct: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQIVYV 120

Query: 121 NENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNSQVWYEILSFSKPAHILSFLSY 180
           NENRDTK A TCFSFGSGTL GHLLAGEERFSIEMD NSQVWYEILSFSKPAHILSFLSY
Sbjct: 121 NENRDTKKAGTCFSFGSGTLHGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSY 180

Query: 181 PYVVLRQKYFAYQSTNAVKKYLTTVN 207
           PYV+LRQKYFA+QSTNAVKKYLT  +
Sbjct: 181 PYVILRQKYFAHQSTNAVKKYLTATH 206

BLAST of Lag0013544 vs. NCBI nr
Match: XP_008440884.1 (PREDICTED: UPF0548 protein At2g17695 [Cucumis melo] >XP_008440885.1 PREDICTED: UPF0548 protein At2g17695 [Cucumis melo])

HSP 1 Score: 401.0 bits (1029), Expect = 6.4e-108
Identity = 186/203 (91.63%), Postives = 195/203 (96.06%), Query Frame = 0

Query: 1   MVFLCWSRPSPQEQKACIDKSGSFNYSSKFRGATANPSSCLQEDKGLSQEGFLLNHARTL 60
           MVFLCWSRPSPQEQKACI+++GSFNYSSKFRGATANPSSCLQEDKG+SQEGFLLNHAR L
Sbjct: 1   MVFLCWSRPSPQEQKACIERAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHARIL 60

Query: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPIHPGVKFCVCTKEFLPWVVLPLQILYV 120
           VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTP+HPGVKFCVC KEFLPWVVLPLQI+YV
Sbjct: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQIVYV 120

Query: 121 NENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNSQVWYEILSFSKPAHILSFLSY 180
           NENR+T   RTCFSFGSGTLQGHLLAGEERFSIEMD NSQVWYEILS SKPAHILSFLSY
Sbjct: 121 NENRNTNKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSISKPAHILSFLSY 180

Query: 181 PYVVLRQKYFAYQSTNAVKKYLT 204
           PYV+LRQKYFA+QSTNA KKYLT
Sbjct: 181 PYVILRQKYFAHQSTNAFKKYLT 203

BLAST of Lag0013544 vs. NCBI nr
Match: XP_004134836.1 (UPF0548 protein At2g17695 isoform X1 [Cucumis sativus] >KGN48967.1 hypothetical protein Csa_003747 [Cucumis sativus])

HSP 1 Score: 398.3 bits (1022), Expect = 4.1e-107
Identity = 186/204 (91.18%), Postives = 196/204 (96.08%), Query Frame = 0

Query: 1   MVFLCWSRPSPQEQKACIDKSGSFNYSSKFRGATANPSSCLQEDK-GLSQEGFLLNHART 60
           MVFLCWSRPSPQEQKACI+++GSFNY+SKFRGATANPSSCLQEDK G+SQEGFLLNHAR 
Sbjct: 1   MVFLCWSRPSPQEQKACIERAGSFNYNSKFRGATANPSSCLQEDKGGISQEGFLLNHARI 60

Query: 61  LVGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPIHPGVKFCVCTKEFLPWVVLPLQILY 120
           LVGSGV TYEKGKKALQNWRHFGLNWAFVDSSTP+HPGVKFCVC KEFLPWVVLPLQI+Y
Sbjct: 61  LVGSGVGTYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQIVY 120

Query: 121 VNENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNSQVWYEILSFSKPAHILSFLS 180
           VNENRDT   RTCFSFGSGTLQGHLLAGEERFSIEMD NSQVWYEILSFSKPAHILSFLS
Sbjct: 121 VNENRDTNKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLS 180

Query: 181 YPYVVLRQKYFAYQSTNAVKKYLT 204
           YPY++LRQKYFA+QSTNAVKKYLT
Sbjct: 181 YPYIILRQKYFAHQSTNAVKKYLT 204

BLAST of Lag0013544 vs. ExPASy Swiss-Prot
Match: Q8GXB1 (UPF0548 protein At2g17695 OS=Arabidopsis thaliana OX=3702 GN=At2g17695 PE=2 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 3.3e-75
Identity = 125/202 (61.88%), Postives = 163/202 (80.69%), Query Frame = 0

Query: 1   MVFLCWSRPSPQEQKACIDKSGSFNYSSKFRGATANPSSCLQEDKGLSQEGFLLNHARTL 60
           MVFL W RPS ++Q+  I+K+G+FNY +K+RG ++   + L+ED  + ++GFL+NHAR L
Sbjct: 1   MVFLSWGRPSSEQQQQVINKTGTFNYDNKYRGVSSRSIAKLKEDSEIDKDGFLINHARVL 60

Query: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPIHPGVKFCVCTKEFLPWVVLPLQILYV 120
           VGSG E+YEKGKKALQNW+HFG++WAFVD +TP+  G KFC+C KE LPWV+LPLQ++YV
Sbjct: 61  VGSGRESYEKGKKALQNWKHFGMDWAFVDPATPVETGKKFCICVKEVLPWVMLPLQVVYV 120

Query: 121 NENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNSQVWYEILSFSKPAHILSFLSY 180
           +E+R ++     F +GSGTLQGHLLAGEE+FSIE+D N +VWYEI SFSKPAH LSFL Y
Sbjct: 121 DESRKSRKGPAHFGYGSGTLQGHLLAGEEKFSIELDGNGEVWYEITSFSKPAHFLSFLGY 180

Query: 181 PYVVLRQKYFAYQSTNAVKKYL 203
           PYV LRQK+FA  S+ AV K++
Sbjct: 181 PYVKLRQKHFARHSSEAVLKHV 202

BLAST of Lag0013544 vs. ExPASy Swiss-Prot
Match: Q86JL6 (UPF0548 protein OS=Dictyostelium discoideum OX=44689 GN=DDB_G0271742 PE=3 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 2.8e-18
Identity = 62/206 (30.10%), Postives = 105/206 (50.97%), Query Frame = 0

Query: 5   CWSRPSPQEQKACID--KSGSFNYSSKFRGATANPSSCLQEDKGLSQEGFLLNHARTLVG 64
           C+ +PS  + K  I+  +   F YS+ +   T + ++  + +       F ++  +  +G
Sbjct: 3   CFRKPSDSDIKQYINDRREEQFAYSNLY--GTQDYATKEEYEMDPKYSNFDVDQVKIQLG 62

Query: 65  SGVETYEKGKKALQNWRHFGLNWA-FVDSSTPIHPGVKFCVCTKEFLPWVVLPLQILYVN 124
           +GVE ++K   AL+ W+HF L+W  F   +TPI  G    + +K+   W++   +I Y+ 
Sbjct: 63  TGVECFQKAVAALKQWKHFDLDWVDFYFKNTPIAVGETVGILSKQVGFWILSFARINYLY 122

Query: 125 ENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKN-------SQVWYEILSFSKPAHI 184
           +  D +     F +  GTL+ H+  GEERF IE  ++         V+YE+LSFS+P++ 
Sbjct: 123 DG-DQEDGSIKFGYSYGTLKDHVEKGEERFVIEWVRDPDGAPDKGAVYYEMLSFSEPSYW 182

Query: 185 LSFLSYPYVVLRQKYFAYQSTNAVKK 201
           LS L YP     Q  F   S N + K
Sbjct: 183 LSQLGYPVTRYFQNKFVVDSCNQMLK 205

BLAST of Lag0013544 vs. ExPASy Swiss-Prot
Match: Q9RST8 (UPF0548 protein DR_2035 OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 / R1 / VKM B-1422) OX=243230 GN=DR_2035 PE=3 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.3e-10
Identity = 44/143 (30.77%), Postives = 70/143 (48.95%), Query Frame = 0

Query: 58  RTLVGSGVETYEKGKKALQNWRHFGLNWAF---VDSSTPI-HPGVKFCVCTKEFLPW--- 117
           R  VG G   +E+ K AL+  + F  +W      ++STP+   G    +  + F PW   
Sbjct: 47  RVRVGEGEACWERAKAALRGGQMF-QDWVLRPHGEASTPLSRQGATVVLLVRHFGPWGRR 106

Query: 118 -----VVLPLQILYVNENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNSQVWYEI 177
                 ++  ++LY+ +  D       + FG GTL GHL+ GEERF +E D    VW+++
Sbjct: 107 KWGLYSLMTNRVLYLVDEPDR------YGFGYGTLPGHLVRGEERFLLERDAGGAVWFDL 166

Query: 178 LSFSKPAHILSFLSYPYVVLRQK 189
            +FS+ A   S  + P V   Q+
Sbjct: 167 TTFSRAALPFSRFAQPLVGAAQR 182

BLAST of Lag0013544 vs. ExPASy TrEMBL
Match: A0A6J1GGC4 (UPF0548 protein At2g17695 OS=Cucurbita moschata OX=3662 GN=LOC111453688 PE=4 SV=1)

HSP 1 Score: 411.4 bits (1056), Expect = 2.3e-111
Identity = 192/203 (94.58%), Postives = 197/203 (97.04%), Query Frame = 0

Query: 1   MVFLCWSRPSPQEQKACIDKSGSFNYSSKFRGATANPSSCLQEDKGLSQEGFLLNHARTL 60
           MVFLCWSRPSPQEQK CID+SGSFNYSSKFRGATANPSSCLQEDKGLSQEGFLLNHAR L
Sbjct: 1   MVFLCWSRPSPQEQKTCIDRSGSFNYSSKFRGATANPSSCLQEDKGLSQEGFLLNHARIL 60

Query: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPIHPGVKFCVCTKEFLPWVVLPLQILYV 120
           VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTP+HPGVKFCVC KEFLPWVV+PLQI+YV
Sbjct: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVMPLQIVYV 120

Query: 121 NENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNSQVWYEILSFSKPAHILSFLSY 180
           NENR T MARTCFSFGSGTLQGHLLAGEERFSIEMD NSQVWYEILSFSKPAHILSFLSY
Sbjct: 121 NENRGTNMARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSY 180

Query: 181 PYVVLRQKYFAYQSTNAVKKYLT 204
           PYV+LRQKYFAYQSTNAVKKYLT
Sbjct: 181 PYVILRQKYFAYQSTNAVKKYLT 203

BLAST of Lag0013544 vs. ExPASy TrEMBL
Match: A0A6J1IMP9 (UPF0548 protein At2g17695 OS=Cucurbita maxima OX=3661 GN=LOC111478798 PE=4 SV=1)

HSP 1 Score: 411.0 bits (1055), Expect = 3.0e-111
Identity = 191/203 (94.09%), Postives = 197/203 (97.04%), Query Frame = 0

Query: 1   MVFLCWSRPSPQEQKACIDKSGSFNYSSKFRGATANPSSCLQEDKGLSQEGFLLNHARTL 60
           MVFLCWSRPSPQEQK CID+SGSFNYSSKFRGATANPSSCLQEDKGLSQEGFLLNHAR L
Sbjct: 1   MVFLCWSRPSPQEQKTCIDRSGSFNYSSKFRGATANPSSCLQEDKGLSQEGFLLNHARIL 60

Query: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPIHPGVKFCVCTKEFLPWVVLPLQILYV 120
           VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTP+HPGVKFCVC KEFLPWVV+PLQI+YV
Sbjct: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVMPLQIVYV 120

Query: 121 NENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNSQVWYEILSFSKPAHILSFLSY 180
           NENR T MARTCFSFGSGTLQGHLLAGEERFSIEMD NSQVWYEILSFSKPAHILSFLSY
Sbjct: 121 NENRGTNMARTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLSY 180

Query: 181 PYVVLRQKYFAYQSTNAVKKYLT 204
           PY++LRQKYFAYQSTNAVKKYLT
Sbjct: 181 PYIILRQKYFAYQSTNAVKKYLT 203

BLAST of Lag0013544 vs. ExPASy TrEMBL
Match: A0A1S3B2T0 (UPF0548 protein At2g17695 OS=Cucumis melo OX=3656 GN=LOC103485173 PE=4 SV=1)

HSP 1 Score: 401.0 bits (1029), Expect = 3.1e-108
Identity = 186/203 (91.63%), Postives = 195/203 (96.06%), Query Frame = 0

Query: 1   MVFLCWSRPSPQEQKACIDKSGSFNYSSKFRGATANPSSCLQEDKGLSQEGFLLNHARTL 60
           MVFLCWSRPSPQEQKACI+++GSFNYSSKFRGATANPSSCLQEDKG+SQEGFLLNHAR L
Sbjct: 1   MVFLCWSRPSPQEQKACIERAGSFNYSSKFRGATANPSSCLQEDKGISQEGFLLNHARIL 60

Query: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPIHPGVKFCVCTKEFLPWVVLPLQILYV 120
           VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTP+HPGVKFCVC KEFLPWVVLPLQI+YV
Sbjct: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQIVYV 120

Query: 121 NENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNSQVWYEILSFSKPAHILSFLSY 180
           NENR+T   RTCFSFGSGTLQGHLLAGEERFSIEMD NSQVWYEILS SKPAHILSFLSY
Sbjct: 121 NENRNTNKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSISKPAHILSFLSY 180

Query: 181 PYVVLRQKYFAYQSTNAVKKYLT 204
           PYV+LRQKYFA+QSTNA KKYLT
Sbjct: 181 PYVILRQKYFAHQSTNAFKKYLT 203

BLAST of Lag0013544 vs. ExPASy TrEMBL
Match: A0A0A0KKV8 (DUF1990 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G507400 PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 2.0e-107
Identity = 186/204 (91.18%), Postives = 196/204 (96.08%), Query Frame = 0

Query: 1   MVFLCWSRPSPQEQKACIDKSGSFNYSSKFRGATANPSSCLQEDK-GLSQEGFLLNHART 60
           MVFLCWSRPSPQEQKACI+++GSFNY+SKFRGATANPSSCLQEDK G+SQEGFLLNHAR 
Sbjct: 1   MVFLCWSRPSPQEQKACIERAGSFNYNSKFRGATANPSSCLQEDKGGISQEGFLLNHARI 60

Query: 61  LVGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPIHPGVKFCVCTKEFLPWVVLPLQILY 120
           LVGSGV TYEKGKKALQNWRHFGLNWAFVDSSTP+HPGVKFCVC KEFLPWVVLPLQI+Y
Sbjct: 61  LVGSGVGTYEKGKKALQNWRHFGLNWAFVDSSTPVHPGVKFCVCAKEFLPWVVLPLQIVY 120

Query: 121 VNENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNSQVWYEILSFSKPAHILSFLS 180
           VNENRDT   RTCFSFGSGTLQGHLLAGEERFSIEMD NSQVWYEILSFSKPAHILSFLS
Sbjct: 121 VNENRDTNKGRTCFSFGSGTLQGHLLAGEERFSIEMDSNSQVWYEILSFSKPAHILSFLS 180

Query: 181 YPYVVLRQKYFAYQSTNAVKKYLT 204
           YPY++LRQKYFA+QSTNAVKKYLT
Sbjct: 181 YPYIILRQKYFAHQSTNAVKKYLT 204

BLAST of Lag0013544 vs. ExPASy TrEMBL
Match: A0A6J1CKD3 (UPF0548 protein At2g17695 OS=Momordica charantia OX=3673 GN=LOC111012092 PE=4 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 9.9e-107
Identity = 187/210 (89.05%), Postives = 199/210 (94.76%), Query Frame = 0

Query: 1   MVFLCWSRPSPQEQKACIDKSGSFNYSSKFRGATANPSSCLQEDKGLSQEGFLLNHARTL 60
           MVFLCWSRPSP E KACID+SGSFNYSSKFRGATANPSS L+EDKGL QEGFLLNHAR L
Sbjct: 1   MVFLCWSRPSPLEHKACIDRSGSFNYSSKFRGATANPSSSLKEDKGLQQEGFLLNHARIL 60

Query: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPIHPGVKFCVCTKEFLPWVVLPLQILYV 120
           VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTP++PGVKFCVC+KEFLPWVV+PLQI+YV
Sbjct: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPVNPGVKFCVCSKEFLPWVVMPLQIVYV 120

Query: 121 NENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNSQVWYEILSFSKPAHILSFLSY 180
           NENRD KMARTCFSFGSGTLQGHLLAGEERFSIEMDKN+QVWYEILSFSKPAHILSF+SY
Sbjct: 121 NENRDAKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNNQVWYEILSFSKPAHILSFISY 180

Query: 181 PYVVLRQKYFAYQSTNAVKKYLT--TVNHS 209
           PYV+LRQKYFA+QS+NAVKKY T  T N S
Sbjct: 181 PYVILRQKYFAHQSSNAVKKYSTASTTNSS 210

BLAST of Lag0013544 vs. TAIR 10
Match: AT2G17695.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1990 (InterPro:IPR018960); Has 259 Blast hits to 259 proteins in 120 species: Archae - 0; Bacteria - 197; Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). )

HSP 1 Score: 282.7 bits (722), Expect = 2.3e-76
Identity = 125/202 (61.88%), Postives = 163/202 (80.69%), Query Frame = 0

Query: 1   MVFLCWSRPSPQEQKACIDKSGSFNYSSKFRGATANPSSCLQEDKGLSQEGFLLNHARTL 60
           MVFL W RPS ++Q+  I+K+G+FNY +K+RG ++   + L+ED  + ++GFL+NHAR L
Sbjct: 1   MVFLSWGRPSSEQQQQVINKTGTFNYDNKYRGVSSRSIAKLKEDSEIDKDGFLINHARVL 60

Query: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPIHPGVKFCVCTKEFLPWVVLPLQILYV 120
           VGSG E+YEKGKKALQNW+HFG++WAFVD +TP+  G KFC+C KE LPWV+LPLQ++YV
Sbjct: 61  VGSGRESYEKGKKALQNWKHFGMDWAFVDPATPVETGKKFCICVKEVLPWVMLPLQVVYV 120

Query: 121 NENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNSQVWYEILSFSKPAHILSFLSY 180
           +E+R ++     F +GSGTLQGHLLAGEE+FSIE+D N +VWYEI SFSKPAH LSFL Y
Sbjct: 121 DESRKSRKGPAHFGYGSGTLQGHLLAGEEKFSIELDGNGEVWYEITSFSKPAHFLSFLGY 180

Query: 181 PYVVLRQKYFAYQSTNAVKKYL 203
           PYV LRQK+FA  S+ AV K++
Sbjct: 181 PYVKLRQKHFARHSSEAVLKHV 202

BLAST of Lag0013544 vs. TAIR 10
Match: AT2G17695.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1990 (InterPro:IPR018960); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 282.7 bits (722), Expect = 2.3e-76
Identity = 125/202 (61.88%), Postives = 163/202 (80.69%), Query Frame = 0

Query: 1   MVFLCWSRPSPQEQKACIDKSGSFNYSSKFRGATANPSSCLQEDKGLSQEGFLLNHARTL 60
           MVFL W RPS ++Q+  I+K+G+FNY +K+RG ++   + L+ED  + ++GFL+NHAR L
Sbjct: 1   MVFLSWGRPSSEQQQQVINKTGTFNYDNKYRGVSSRSIAKLKEDSEIDKDGFLINHARVL 60

Query: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPIHPGVKFCVCTKEFLPWVVLPLQILYV 120
           VGSG E+YEKGKKALQNW+HFG++WAFVD +TP+  G KFC+C KE LPWV+LPLQ++YV
Sbjct: 61  VGSGRESYEKGKKALQNWKHFGMDWAFVDPATPVETGKKFCICVKEVLPWVMLPLQVVYV 120

Query: 121 NENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNSQVWYEILSFSKPAHILSFLSY 180
           +E+R ++     F +GSGTLQGHLLAGEE+FSIE+D N +VWYEI SFSKPAH LSFL Y
Sbjct: 121 DESRKSRKGPAHFGYGSGTLQGHLLAGEEKFSIELDGNGEVWYEITSFSKPAHFLSFLGY 180

Query: 181 PYVVLRQKYFAYQSTNAVKKYL 203
           PYV LRQK+FA  S+ AV K++
Sbjct: 181 PYVKLRQKHFARHSSEAVLKHV 202

BLAST of Lag0013544 vs. TAIR 10
Match: AT2G17695.3 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1990 (InterPro:IPR018960). )

HSP 1 Score: 282.7 bits (722), Expect = 2.3e-76
Identity = 125/202 (61.88%), Postives = 163/202 (80.69%), Query Frame = 0

Query: 1   MVFLCWSRPSPQEQKACIDKSGSFNYSSKFRGATANPSSCLQEDKGLSQEGFLLNHARTL 60
           MVFL W RPS ++Q+  I+K+G+FNY +K+RG ++   + L+ED  + ++GFL+NHAR L
Sbjct: 1   MVFLSWGRPSSEQQQQVINKTGTFNYDNKYRGVSSRSIAKLKEDSEIDKDGFLINHARVL 60

Query: 61  VGSGVETYEKGKKALQNWRHFGLNWAFVDSSTPIHPGVKFCVCTKEFLPWVVLPLQILYV 120
           VGSG E+YEKGKKALQNW+HFG++WAFVD +TP+  G KFC+C KE LPWV+LPLQ++YV
Sbjct: 61  VGSGRESYEKGKKALQNWKHFGMDWAFVDPATPVETGKKFCICVKEVLPWVMLPLQVVYV 120

Query: 121 NENRDTKMARTCFSFGSGTLQGHLLAGEERFSIEMDKNSQVWYEILSFSKPAHILSFLSY 180
           +E+R ++     F +GSGTLQGHLLAGEE+FSIE+D N +VWYEI SFSKPAH LSFL Y
Sbjct: 121 DESRKSRKGPAHFGYGSGTLQGHLLAGEEKFSIELDGNGEVWYEITSFSKPAHFLSFLGY 180

Query: 181 PYVVLRQKYFAYQSTNAVKKYL 203
           PYV LRQK+FA  S+ AV K++
Sbjct: 181 PYVKLRQKHFARHSSEAVLKHV 202

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022950650.14.7e-11194.58UPF0548 protein At2g17695 [Cucurbita moschata] >XP_023543885.1 UPF0548 protein A... [more]
XP_022979037.16.1e-11194.09UPF0548 protein At2g17695 [Cucurbita maxima][more]
XP_038883220.12.9e-10890.29UPF0548 protein At2g17695 isoform X1 [Benincasa hispida] >XP_038883221.1 UPF0548... [more]
XP_008440884.16.4e-10891.63PREDICTED: UPF0548 protein At2g17695 [Cucumis melo] >XP_008440885.1 PREDICTED: U... [more]
XP_004134836.14.1e-10791.18UPF0548 protein At2g17695 isoform X1 [Cucumis sativus] >KGN48967.1 hypothetical ... [more]
Match NameE-valueIdentityDescription
Q8GXB13.3e-7561.88UPF0548 protein At2g17695 OS=Arabidopsis thaliana OX=3702 GN=At2g17695 PE=2 SV=1[more]
Q86JL62.8e-1830.10UPF0548 protein OS=Dictyostelium discoideum OX=44689 GN=DDB_G0271742 PE=3 SV=1[more]
Q9RST81.3e-1030.77UPF0548 protein DR_2035 OS=Deinococcus radiodurans (strain ATCC 13939 / DSM 2053... [more]
Match NameE-valueIdentityDescription
A0A6J1GGC42.3e-11194.58UPF0548 protein At2g17695 OS=Cucurbita moschata OX=3662 GN=LOC111453688 PE=4 SV=... [more]
A0A6J1IMP93.0e-11194.09UPF0548 protein At2g17695 OS=Cucurbita maxima OX=3661 GN=LOC111478798 PE=4 SV=1[more]
A0A1S3B2T03.1e-10891.63UPF0548 protein At2g17695 OS=Cucumis melo OX=3656 GN=LOC103485173 PE=4 SV=1[more]
A0A0A0KKV82.0e-10791.18DUF1990 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G507400 PE=... [more]
A0A6J1CKD39.9e-10789.05UPF0548 protein At2g17695 OS=Momordica charantia OX=3673 GN=LOC111012092 PE=4 SV... [more]
Match NameE-valueIdentityDescription
AT2G17695.12.3e-7661.88FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
AT2G17695.22.3e-7661.88FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
AT2G17695.32.3e-7661.88FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR018960Domain of unknown function DUF1990PFAMPF09348DUF1990coord: 46..196
e-value: 2.5E-40
score: 138.1
NoneNo IPR availablePANTHERPTHR34202:SF1UPF0548 PROTEINcoord: 1..203
NoneNo IPR availablePANTHERPTHR34202UPF0548 PROTEINcoord: 1..203

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0013544.1Lag0013544.1mRNA