Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAATAATCTCAGGTATCACCATGTTCTTGTTAACGGAAATTGTCCTGTTTGTCAGGAAGAGCTGGAGACCACAGATCATGCTCTATTCCTTTGCAAGAGAGCCAGGGAGGTTTGAGATATTCTTTTTCCATCCTTGCTTGGCAATTCTGAATTGTTGGACATTAAAGAGCGTTGGTTGCTTTTTAGCGAGTTTTAGGGGTTGGATATTGAAAGGATTTGTGTCGCAGCATGGTCCATTTGGAACGATAGGAATACTTGGATCCATAACCATCCCATTCCTACGGCTACAGGGAGATGTGAATGGATTGATGATTATATATCCGAATATAGGACGACTAATCCCAAGGGTGGGGCTCTTGTACAGTCAGAGAAGGATGTTACCAGGATTATCTCAATGAGTGAAGAGATTATTTTAAATACCGATGTAGCGTATATGGGAGCTATTGGTAAAAGTGGAATTGGGTTAATCATGCGGGATAGATCGGGACAAATAATCCAGGCGGCTCAGGCAATGATCTCTCCAGTTTCTACTTCAGCGTTAGGGGCGGAAGCGGAGGCAGTGTTACAAGGGCTTCGACTAGCCAGATCAATGGGCATTAGTCGGTTAACAGTTATGTCTGATTCTCTGAATCTGGTTAAATCGATTAATAAGGAGATTAATCAAGGCGATTCGTGCATTACTTCCACTATGTGGGATATTCATGATATACGATCAAACTTCACCAAGGTGACCTTTAACTTTGTTAGTAGGAGATTCAACGACATTGCCCACTCATTGGCAAATGCAGGTCTTTATTCACCTTCCGTATTATGGTTGGATAACTATCCGGAATGGATAGAAAATTTGTCGTCACAAGAACGACGTCTGTTTGTATCCCTTCAGGGGCATTCTGATTATTAA
mRNA sequence
ATGAATAATCTCAGGTATCACCATGTTCTTGTTAACGGAAATTGTCCTGTTTGTCAGGAAGAGCTGGAGACCACAGATCATGCTCTATTCCTTTGCAAGAGAGCCAGGGAGGGGTTGGATATTGAAAGGATTTGTGTCGCAGCATGGTCCATTTGGAACGATAGGAATACTTGGATCCATAACCATCCCATTCCTACGGCTACAGGGAGATGTGAATGGATTGATGATTATATATCCGAATATAGGACGACTAATCCCAAGGGTGGGGCTCTTGTACAGTCAGAGAAGGATGTTACCAGGATTATCTCAATGAGTGAAGAGATTATTTTAAATACCGATGTAGCGTATATGGGAGCTATTGGTAAAAGTGGAATTGGGTTAATCATGCGGGATAGATCGGGACAAATAATCCAGGCGGCTCAGGCAATGATCTCTCCAGTTTCTACTTCAGCGTTAGGGGCGGAAGCGGAGGCAGTGTTACAAGGGCTTCGACTAGCCAGATCAATGGGCATTAGTCGGTTAACAGTTATGTCTGATTCTCTGAATCTGGTTAAATCGATTAATAAGGAGATTAATCAAGGCGATTCGTGCATTACTTCCACTATGTGGGATATTCATGATATACGATCAAACTTCACCAAGGTGACCTTTAACTTTGTTAGTAGGAGATTCAACGACATTGCCCACTCATTGGCAAATGCAGGTCTTTATTCACCTTCCGTATTATGGTTGGATAACTATCCGGAATGGATAGAAAATTTGTCGTCACAAGAACGACGTCTGTTTGTATCCCTTCAGGGGCATTCTGATTATTAA
Coding sequence (CDS)
ATGAATAATCTCAGGTATCACCATGTTCTTGTTAACGGAAATTGTCCTGTTTGTCAGGAAGAGCTGGAGACCACAGATCATGCTCTATTCCTTTGCAAGAGAGCCAGGGAGGGGTTGGATATTGAAAGGATTTGTGTCGCAGCATGGTCCATTTGGAACGATAGGAATACTTGGATCCATAACCATCCCATTCCTACGGCTACAGGGAGATGTGAATGGATTGATGATTATATATCCGAATATAGGACGACTAATCCCAAGGGTGGGGCTCTTGTACAGTCAGAGAAGGATGTTACCAGGATTATCTCAATGAGTGAAGAGATTATTTTAAATACCGATGTAGCGTATATGGGAGCTATTGGTAAAAGTGGAATTGGGTTAATCATGCGGGATAGATCGGGACAAATAATCCAGGCGGCTCAGGCAATGATCTCTCCAGTTTCTACTTCAGCGTTAGGGGCGGAAGCGGAGGCAGTGTTACAAGGGCTTCGACTAGCCAGATCAATGGGCATTAGTCGGTTAACAGTTATGTCTGATTCTCTGAATCTGGTTAAATCGATTAATAAGGAGATTAATCAAGGCGATTCGTGCATTACTTCCACTATGTGGGATATTCATGATATACGATCAAACTTCACCAAGGTGACCTTTAACTTTGTTAGTAGGAGATTCAACGACATTGCCCACTCATTGGCAAATGCAGGTCTTTATTCACCTTCCGTATTATGGTTGGATAACTATCCGGAATGGATAGAAAATTTGTCGTCACAAGAACGACGTCTGTTTGTATCCCTTCAGGGGCATTCTGATTATTAA
Protein sequence
MNNLRYHHVLVNGNCPVCQEELETTDHALFLCKRAREGLDIERICVAAWSIWNDRNTWIHNHPIPTATGRCEWIDDYISEYRTTNPKGGALVQSEKDVTRIISMSEEIILNTDVAYMGAIGKSGIGLIMRDRSGQIIQAAQAMISPVSTSALGAEAEAVLQGLRLARSMGISRLTVMSDSLNLVKSINKEINQGDSCITSTMWDIHDIRSNFTKVTFNFVSRRFNDIAHSLANAGLYSPSVLWLDNYPEWIENLSSQERRLFVSLQGHSDY
Homology
BLAST of Lag0012954 vs. NCBI nr
Match:
GAU33827.1 (hypothetical protein TSUD_221650 [Trifolium subterraneum])
HSP 1 Score: 103.6 bits (257), Expect = 2.7e-18
Identity = 82/255 (32.16%), Postives = 124/255 (48.63%), Query Frame = 0
Query: 14 NCPVCQEELETTDHALFLCKRAREGLD-IERICVAAWSIWNDRN--TWIHNHPIPTATGR 73
NCPVC EE+E H F + E D + R+ + W IW++RN W N +P GR
Sbjct: 1100 NCPVCDEEIEDELHIFF----SNESSDTVGRVAMLLWCIWHNRNDKLWNDNVQLPRQIGR 1159
Query: 74 ---CEWIDDY-ISEYRTTNPKGGA---LVQSEKDVTRIISMSEEIILNTDVAYMGAIGKS 133
W D Y + + ++ N G LV+ EK + + N DVA++ G++
Sbjct: 1160 HALDAWNDWYSVHKLQSNNVSGSIKTDLVRWEKPTL------DWVKCNVDVAFVSGSGRT 1219
Query: 134 GIGLIMRDRSGQIIQAAQAMISPVSTSALGAEAEAVLQGLRLARSMGISRLTVMSDSLNL 193
+GL RD SGQ + A S++ EA A+L + AR G+ R+ SDS L
Sbjct: 1220 SVGLCFRDNSGQFM-AGMTQWQQTVISSVEEEAWALLLAMEEARHRGLDRVQFESDSKVL 1279
Query: 194 VKSINKEINQGDSCITSTMWDIHDIRSNFTKVTFNFVSRRFNDIAHSLANAGLYSPSVLW 253
+++I+ + +G+S S + DI + S+F FV R+ N +AH+LA A S
Sbjct: 1280 IEAIHMK-RRGNSEFLSIVHDILSLMSSFINFEVKFVRRQANLVAHTLARAANSWASFHR 1339
Query: 254 LDNYPEWIENLSSQE 259
+N P IE+L E
Sbjct: 1340 FENIPFCIEHLIFNE 1342
BLAST of Lag0012954 vs. NCBI nr
Match:
GAU40431.1 (hypothetical protein TSUD_397500 [Trifolium subterraneum])
HSP 1 Score: 103.2 bits (256), Expect = 3.6e-18
Identity = 81/254 (31.89%), Postives = 117/254 (46.06%), Query Frame = 0
Query: 14 NCPVCQEELETTDHALFLCKRAREGLDIERICVAAWSIWNDRN--TWIHNHPIPTATGRC 73
NCPVC EE+E H F K + + R+ + W IW++RN W N +P+ GR
Sbjct: 793 NCPVCDEEIEDEIHIFFSNKSSD---TVGRVAMLLWCIWHNRNDKLWNDNIQMPSQIGRY 852
Query: 74 ---EWIDDYISEYRTTNPKGGA----LVQSEKDVTRIISMSEEIILNTDVAYMGAIGKSG 133
W D Y +N G LV+ EK + N DVA++ G++
Sbjct: 853 AFDAWNDWYSVHKLQSNSVSGTTEVDLVRWEKPALGWVK------YNVDVAFVSGSGRTS 912
Query: 134 IGLIMRDRSGQIIQAAQAMISPVSTSALGAEAEAVLQGLRLARSMGISRLTVMSDSLNLV 193
+GL RD SGQ + A S++ EA A+L + AR G+ R+ SDS L+
Sbjct: 913 VGLCFRDSSGQFM-AGMTQWQQTVISSVEGEAWALLLAMEEARHRGMDRVQFESDSKVLI 972
Query: 194 KSINKEINQGDSCITSTMWDIHDIRSNFTKVTFNFVSRRFNDIAHSLANAGLYSPSVLWL 253
I+ + +G+S S + DI D S+F FV R+ N +AH+LA A
Sbjct: 973 DVIHMK-RRGNSEFLSIVHDILDFMSSFLNFEVKFVKRQANSVAHTLARAANSWSCFHRF 1032
Query: 254 DNYPEWIENLSSQE 259
+N P IE+L E
Sbjct: 1033 ENIPLCIEHLVFNE 1035
BLAST of Lag0012954 vs. NCBI nr
Match:
GAU47930.1 (hypothetical protein TSUD_14000 [Trifolium subterraneum])
HSP 1 Score: 99.0 bits (245), Expect = 6.7e-17
Identity = 86/260 (33.08%), Postives = 120/260 (46.15%), Query Frame = 0
Query: 12 NGNCPVCQEELETTDHALFLCKRAREGLDI-ERICVAAWSIWNDRN--TWIHNHPIPTAT 71
N NCPVC EE++ H F + E DI R+ + W IW +RN W N P
Sbjct: 142 NLNCPVCDEEIKDEIHIFF----SNESSDIVGRMVMLLWCIWQNRNDKLWNDNVQTPRQI 201
Query: 72 GRC---EWIDDYI-------SEYRTTNPKGGALVQSEKDVTRIISMSEEIILNTDVAYMG 131
GR W D Y SE RTT LV+ EK + N DVA++
Sbjct: 202 GRYVFDAWNDWYSVHKLQSDSESRTTE---ADLVRWEKPALGWVK------CNVDVAFVP 261
Query: 132 AIGKSGIGLIMRDRSGQIIQAAQAMISPVSTSALGAEAEAVLQGLRLARSMGISRLTVMS 191
G++ +GL R+ GQ++ V +S G EA A+L + AR G+ R+ S
Sbjct: 262 GSGRTSVGLCFRNNRGQVMAGMTHWQQTVMSSVEG-EAWALLLAMEEARHRGLDRVQFES 321
Query: 192 DSLNLVKSINKEINQGDSCITSTMWDIHDIRSNFTKVTFNFVSRRFNDIAHSLANAGLYS 251
DS LV++I+ + +G+S S + DI S+F FV R+ N +AH+LA A
Sbjct: 322 DSKVLVEAIHMK-RRGNSEFLSIVHDIISFMSSFLNFEVKFVRRQANSVAHTLARAANSW 381
Query: 252 PSVLWLDNYPEWIENLSSQE 259
S +N P IE+L E
Sbjct: 382 SSFHRFENIPLCIEHLVVNE 386
BLAST of Lag0012954 vs. NCBI nr
Match:
GAU36566.1 (hypothetical protein TSUD_277720 [Trifolium subterraneum])
HSP 1 Score: 99.0 bits (245), Expect = 6.7e-17
Identity = 84/284 (29.58%), Postives = 126/284 (44.37%), Query Frame = 0
Query: 14 NCPVCQEELETTDHALFLCKRARE-----GLD---------------------------- 73
NCPVC EE+E H F C AR+ GL
Sbjct: 558 NCPVCDEEIEDELHIFFRCAVARDSWSAAGLSFVLHNATYQQTNAMDRIFAVCNNESSDT 617
Query: 74 IERICVAAWSIWNDRN--TWIHNHPIPTATGR---CEWIDDYISEYRTTNPKGGALVQSE 133
+ R+ + WSIW++RN W N +P TGR W D Y +N +E
Sbjct: 618 VGRVAMLLWSIWHNRNDKLWNDNVQMPRQTGRHAFDAWNDWYSVHKLQSN---NVSRTTE 677
Query: 134 KDVTRIISMS-EEIILNTDVAYMGAIGKSGIGLIMRDRSGQIIQAAQAMISPVSTSALGA 193
+D+ R + + + N D A++ G++ +GL RD SG + A S++
Sbjct: 678 EDLVRWEKPALDWVKCNVDAAFVSGSGRTSVGLCFRDNSGHFM-AGMTQWQQTVISSVEG 737
Query: 194 EAEAVLQGLRLARSMGISRLTVMSDSLNLVKSINKEINQGDSCITSTMWDIHDIRSNFTK 253
EA A+L + AR G+ R+ SDS L+++I+ + +G+S S + DI + S+F
Sbjct: 738 EAWALLLAMEEARHRGLDRVQFESDSKVLIEAIHMQ-RRGNSEFLSIVHDILSLMSSFIN 797
Query: 254 VTFNFVSRRFNDIAHSLANAGLYSPSVLWLDNYPEWIENLSSQE 259
NFV R+ N +AH+LA A S +N P IE+L E
Sbjct: 798 FEVNFVRRQANLVAHTLARAANSWASFHRFENIPFCIEHLIFNE 836
BLAST of Lag0012954 vs. NCBI nr
Match:
GAU41000.1 (hypothetical protein TSUD_92250 [Trifolium subterraneum])
HSP 1 Score: 98.6 bits (244), Expect = 8.8e-17
Identity = 90/292 (30.82%), Postives = 124/292 (42.47%), Query Frame = 0
Query: 12 NGNCPVCQEELETTDHALFLCKRARE-----GLD-------------------------- 71
N NCPVC EE+E H F C AR+ GL
Sbjct: 493 NLNCPVCDEEIEYEIHIFFRCAVARDSWCAAGLSSVLHNDAYQQSNAMNRIFAVCSNDSS 552
Query: 72 --IERICVAAWSIWNDRN--TWIHNHPIPTATGRC---EWIDDYI-------SEYRTTNP 131
+ R+ + W IW +RN WI N P GR W D Y SE RTT
Sbjct: 553 DIVGRVAMLLWCIWQNRNDKLWIDNVQTPRQIGRYAFDAWNDWYSIHKLQSNSESRTTE- 612
Query: 132 KGGALVQSEKDVTRIISMSEEIILNTDVAYMGAIGKSGIGLIMRDRSGQIIQAAQAMISP 191
LV+ EK + N DVA++ G++ +GL R+ GQ++
Sbjct: 613 --ADLVRWEKPALGWVK------CNVDVAFVSGSGRTSVGLCFRNNRGQVMAGITQWQQT 672
Query: 192 VSTSALGAEAEAVLQGLRLARSMGISRLTVMSDSLNLVKSINKEINQGDSCITSTMWDIH 251
V +S G EA A+L + AR G+ R+ SDS LV++I+ + +G+S S + DI
Sbjct: 673 VMSSIEG-EAWALLLAMEEARHRGLDRVQFESDSKVLVEAIHMK-RRGNSEFLSIVHDII 732
Query: 252 DIRSNFTKVTFNFVSRRFNDIAHSLANAGLYSPSVLWLDNYPEWIENLSSQE 259
S+F FV R+ N +AH+LA A S +N P IE+L E
Sbjct: 733 TFMSSFLNFEVKFVRRQTNSVAHTLARAANSWSSFHRFENIPLCIEHLVVNE 773
BLAST of Lag0012954 vs. ExPASy TrEMBL
Match:
A0A2Z6NUW6 (CCHC-type domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_221650 PE=4 SV=1)
HSP 1 Score: 103.6 bits (257), Expect = 1.3e-18
Identity = 82/255 (32.16%), Postives = 124/255 (48.63%), Query Frame = 0
Query: 14 NCPVCQEELETTDHALFLCKRAREGLD-IERICVAAWSIWNDRN--TWIHNHPIPTATGR 73
NCPVC EE+E H F + E D + R+ + W IW++RN W N +P GR
Sbjct: 1100 NCPVCDEEIEDELHIFF----SNESSDTVGRVAMLLWCIWHNRNDKLWNDNVQLPRQIGR 1159
Query: 74 ---CEWIDDY-ISEYRTTNPKGGA---LVQSEKDVTRIISMSEEIILNTDVAYMGAIGKS 133
W D Y + + ++ N G LV+ EK + + N DVA++ G++
Sbjct: 1160 HALDAWNDWYSVHKLQSNNVSGSIKTDLVRWEKPTL------DWVKCNVDVAFVSGSGRT 1219
Query: 134 GIGLIMRDRSGQIIQAAQAMISPVSTSALGAEAEAVLQGLRLARSMGISRLTVMSDSLNL 193
+GL RD SGQ + A S++ EA A+L + AR G+ R+ SDS L
Sbjct: 1220 SVGLCFRDNSGQFM-AGMTQWQQTVISSVEEEAWALLLAMEEARHRGLDRVQFESDSKVL 1279
Query: 194 VKSINKEINQGDSCITSTMWDIHDIRSNFTKVTFNFVSRRFNDIAHSLANAGLYSPSVLW 253
+++I+ + +G+S S + DI + S+F FV R+ N +AH+LA A S
Sbjct: 1280 IEAIHMK-RRGNSEFLSIVHDILSLMSSFINFEVKFVRRQANLVAHTLARAANSWASFHR 1339
Query: 254 LDNYPEWIENLSSQE 259
+N P IE+L E
Sbjct: 1340 FENIPFCIEHLIFNE 1342
BLAST of Lag0012954 vs. ExPASy TrEMBL
Match:
A0A2Z6N9N6 (ZnF_PMZ domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_397500 PE=4 SV=1)
HSP 1 Score: 103.2 bits (256), Expect = 1.7e-18
Identity = 81/254 (31.89%), Postives = 117/254 (46.06%), Query Frame = 0
Query: 14 NCPVCQEELETTDHALFLCKRAREGLDIERICVAAWSIWNDRN--TWIHNHPIPTATGRC 73
NCPVC EE+E H F K + + R+ + W IW++RN W N +P+ GR
Sbjct: 793 NCPVCDEEIEDEIHIFFSNKSSD---TVGRVAMLLWCIWHNRNDKLWNDNIQMPSQIGRY 852
Query: 74 ---EWIDDYISEYRTTNPKGGA----LVQSEKDVTRIISMSEEIILNTDVAYMGAIGKSG 133
W D Y +N G LV+ EK + N DVA++ G++
Sbjct: 853 AFDAWNDWYSVHKLQSNSVSGTTEVDLVRWEKPALGWVK------YNVDVAFVSGSGRTS 912
Query: 134 IGLIMRDRSGQIIQAAQAMISPVSTSALGAEAEAVLQGLRLARSMGISRLTVMSDSLNLV 193
+GL RD SGQ + A S++ EA A+L + AR G+ R+ SDS L+
Sbjct: 913 VGLCFRDSSGQFM-AGMTQWQQTVISSVEGEAWALLLAMEEARHRGMDRVQFESDSKVLI 972
Query: 194 KSINKEINQGDSCITSTMWDIHDIRSNFTKVTFNFVSRRFNDIAHSLANAGLYSPSVLWL 253
I+ + +G+S S + DI D S+F FV R+ N +AH+LA A
Sbjct: 973 DVIHMK-RRGNSEFLSIVHDILDFMSSFLNFEVKFVKRQANSVAHTLARAANSWSCFHRF 1032
Query: 254 DNYPEWIENLSSQE 259
+N P IE+L E
Sbjct: 1033 ENIPLCIEHLVFNE 1035
BLAST of Lag0012954 vs. ExPASy TrEMBL
Match:
A0A2Z6PCM8 (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_14000 PE=4 SV=1)
HSP 1 Score: 99.0 bits (245), Expect = 3.3e-17
Identity = 86/260 (33.08%), Postives = 120/260 (46.15%), Query Frame = 0
Query: 12 NGNCPVCQEELETTDHALFLCKRAREGLDI-ERICVAAWSIWNDRN--TWIHNHPIPTAT 71
N NCPVC EE++ H F + E DI R+ + W IW +RN W N P
Sbjct: 142 NLNCPVCDEEIKDEIHIFF----SNESSDIVGRMVMLLWCIWQNRNDKLWNDNVQTPRQI 201
Query: 72 GRC---EWIDDYI-------SEYRTTNPKGGALVQSEKDVTRIISMSEEIILNTDVAYMG 131
GR W D Y SE RTT LV+ EK + N DVA++
Sbjct: 202 GRYVFDAWNDWYSVHKLQSDSESRTTE---ADLVRWEKPALGWVK------CNVDVAFVP 261
Query: 132 AIGKSGIGLIMRDRSGQIIQAAQAMISPVSTSALGAEAEAVLQGLRLARSMGISRLTVMS 191
G++ +GL R+ GQ++ V +S G EA A+L + AR G+ R+ S
Sbjct: 262 GSGRTSVGLCFRNNRGQVMAGMTHWQQTVMSSVEG-EAWALLLAMEEARHRGLDRVQFES 321
Query: 192 DSLNLVKSINKEINQGDSCITSTMWDIHDIRSNFTKVTFNFVSRRFNDIAHSLANAGLYS 251
DS LV++I+ + +G+S S + DI S+F FV R+ N +AH+LA A
Sbjct: 322 DSKVLVEAIHMK-RRGNSEFLSIVHDIISFMSSFLNFEVKFVRRQANSVAHTLARAANSW 381
Query: 252 PSVLWLDNYPEWIENLSSQE 259
S +N P IE+L E
Sbjct: 382 SSFHRFENIPLCIEHLVVNE 386
BLAST of Lag0012954 vs. ExPASy TrEMBL
Match:
A0A2Z6NW00 (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_92250 PE=4 SV=1)
HSP 1 Score: 98.6 bits (244), Expect = 4.3e-17
Identity = 90/292 (30.82%), Postives = 124/292 (42.47%), Query Frame = 0
Query: 12 NGNCPVCQEELETTDHALFLCKRARE-----GLD-------------------------- 71
N NCPVC EE+E H F C AR+ GL
Sbjct: 493 NLNCPVCDEEIEYEIHIFFRCAVARDSWCAAGLSSVLHNDAYQQSNAMNRIFAVCSNDSS 552
Query: 72 --IERICVAAWSIWNDRN--TWIHNHPIPTATGRC---EWIDDYI-------SEYRTTNP 131
+ R+ + W IW +RN WI N P GR W D Y SE RTT
Sbjct: 553 DIVGRVAMLLWCIWQNRNDKLWIDNVQTPRQIGRYAFDAWNDWYSIHKLQSNSESRTTE- 612
Query: 132 KGGALVQSEKDVTRIISMSEEIILNTDVAYMGAIGKSGIGLIMRDRSGQIIQAAQAMISP 191
LV+ EK + N DVA++ G++ +GL R+ GQ++
Sbjct: 613 --ADLVRWEKPALGWVK------CNVDVAFVSGSGRTSVGLCFRNNRGQVMAGITQWQQT 672
Query: 192 VSTSALGAEAEAVLQGLRLARSMGISRLTVMSDSLNLVKSINKEINQGDSCITSTMWDIH 251
V +S G EA A+L + AR G+ R+ SDS LV++I+ + +G+S S + DI
Sbjct: 673 VMSSIEG-EAWALLLAMEEARHRGLDRVQFESDSKVLVEAIHMK-RRGNSEFLSIVHDII 732
Query: 252 DIRSNFTKVTFNFVSRRFNDIAHSLANAGLYSPSVLWLDNYPEWIENLSSQE 259
S+F FV R+ N +AH+LA A S +N P IE+L E
Sbjct: 733 TFMSSFLNFEVKFVRRQTNSVAHTLARAANSWSSFHRFENIPLCIEHLVVNE 773
BLAST of Lag0012954 vs. ExPASy TrEMBL
Match:
A0A2Z6P8I4 (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_77650 PE=4 SV=1)
HSP 1 Score: 97.8 bits (242), Expect = 7.3e-17
Identity = 78/251 (31.08%), Postives = 117/251 (46.61%), Query Frame = 0
Query: 14 NCPVCQEELETTDHALFLCKRAREGLDIERICVAAWSIWNDRN--TWIHNHPIPTATGR- 73
NCPVC EE+E H +F + R+ + W IW +RN W N +P GR
Sbjct: 290 NCPVCDEEIEDELH-IFFSVHNESSDTVGRVAMLLWCIWKNRNDKLWNDNVHMPRQIGRH 349
Query: 74 --CEWIDDYISEYRTTNPKGGALVQSEKDVTRIISMS-EEIILNTDVAYMGAIGKSGIGL 133
W D Y +N G +E DV R + + + N DVA++ G++ +GL
Sbjct: 350 AFDAWNDWYSVHKLQSNNMSGT---TEADVVRWEKPALDWVKCNVDVAFVSGSGRTSMGL 409
Query: 134 IMRDRSGQIIQAAQAMISPVSTSALGAEAEAVLQGLRLARSMGISRLTVMSDSLNLVKSI 193
RD SG + A S++ EA A+L + AR G++R+ SD L+++I
Sbjct: 410 CFRDNSGHFM-AGMTQWQQTVISSVEGEAWALLLAMEEARHRGLNRVQFESDLKVLIEAI 469
Query: 194 NKEINQGDSCITSTMWDIHDIRSNFTKVTFNFVSRRFNDIAHSLANAGLYSPSVLWLDNY 253
+ + +G+S S + DI + S+F FV R+ N +AH+LA A S +N
Sbjct: 470 HVK-RRGNSEFLSIVHDILSLMSSFINFEVKFVRRQANLVAHTLARAANSWASFHRFENI 529
Query: 254 PEWIENLSSQE 259
P IE L E
Sbjct: 530 PFCIERLVFNE 534
BLAST of Lag0012954 vs. TAIR 10
Match:
AT4G09490.1 (Polynucleotidyl transferase, ribonuclease H-like superfamily protein )
HSP 1 Score: 48.1 bits (113), Expect = 1.3e-05
Identity = 40/137 (29.20%), Postives = 69/137 (50.36%), Query Frame = 0
Query: 106 EEIILNTDVAYMGAIGKSGIGLIMRDRSGQIIQAAQAMISPVSTSALGAEAEAVLQGLRL 165
+ + + TD A+ G G ++R+ Q+ V L AEA A+ L+
Sbjct: 29 DRVTIFTDAAWKHETKDVGFGWVIRNCPELTALHYQSAARNVRL-PLMAEAIALFLALQY 88
Query: 166 ARSMGISRLTVMSDSLNLVKSINKEINQGDSCITSTMWDIHDIRSNFTKVTFNFVSRRFN 225
A+S+GI++L++ SDS L+ +I E + ++DI ++ F V+F+FV R N
Sbjct: 89 AQSIGITKLSMASDSQQLITAITSESPSTE--FYGIIFDILNLSLGFADVSFSFVPRSEN 148
Query: 226 DIAHSLANAGLYSPSVL 243
+A LA + L S S++
Sbjct: 149 RVADELAKSSLISFSIV 162
BLAST of Lag0012954 vs. TAIR 10
Match:
AT3G09510.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 45.8 bits (107), Expect = 6.3e-05
Identity = 68/298 (22.82%), Postives = 110/298 (36.91%), Query Frame = 0
Query: 11 VNGNCPVCQEELETTDHALFLCKRA---------------------REGL---------- 70
++ +CP C E E+ +HALF C A E +
Sbjct: 196 IDPSCPRCHRENESINHALFTCPFATMAWRLSDSSLIRNQLMSNDFEENISNILNFVQDT 255
Query: 71 ---DIERICVA--AWSIWNDRNTWIHN--HPIPTAT------GRCEWIDDYISEYRTTNP 130
D ++ W IW RN + N P+ T +W++ S +T +P
Sbjct: 256 TMSDFHKLLPVWLIWRIWKARNNVVFNKFRESPSKTVLSAKAETHDWLNATQSHKKTPSP 315
Query: 131 KGGALVQSEKDVTRIISMSEEIILNTDVAYMGAIGKSGI---------GLIMRDRSGQII 190
TR I+ ++ N Y+ +G G I+R+ G I
Sbjct: 316 ------------TRQIAENKIEWRNPPATYVKCNFDAGFDVQKLEATGGWIIRNHYGTPI 375
Query: 191 QAAQAMISPVSTSALGAEAEAVLQGLRLARSMGISRLTVMSDSLNLVKSINKEINQGDSC 248
++ S + L AE +A+L L+ G +++ + D L+ IN S
Sbjct: 376 SWGSMKLAHTS-NPLEAETKALLAALQQTWIRGYTQVFMEGDCQTLINLING--ISFHSS 435
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
GAU33827.1 | 2.7e-18 | 32.16 | hypothetical protein TSUD_221650 [Trifolium subterraneum] | [more] |
GAU40431.1 | 3.6e-18 | 31.89 | hypothetical protein TSUD_397500 [Trifolium subterraneum] | [more] |
GAU47930.1 | 6.7e-17 | 33.08 | hypothetical protein TSUD_14000 [Trifolium subterraneum] | [more] |
GAU36566.1 | 6.7e-17 | 29.58 | hypothetical protein TSUD_277720 [Trifolium subterraneum] | [more] |
GAU41000.1 | 8.8e-17 | 30.82 | hypothetical protein TSUD_92250 [Trifolium subterraneum] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A2Z6NUW6 | 1.3e-18 | 32.16 | CCHC-type domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_22... | [more] |
A0A2Z6N9N6 | 1.7e-18 | 31.89 | ZnF_PMZ domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_3975... | [more] |
A0A2Z6PCM8 | 3.3e-17 | 33.08 | Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_14000 PE=4 SV=... | [more] |
A0A2Z6NW00 | 4.3e-17 | 30.82 | Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_92250 PE=4 SV=... | [more] |
A0A2Z6P8I4 | 7.3e-17 | 31.08 | Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_77650 PE=4 SV=... | [more] |
Match Name | E-value | Identity | Description | |
AT4G09490.1 | 1.3e-05 | 29.20 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | [more] |
AT3G09510.1 | 6.3e-05 | 22.82 | Ribonuclease H-like superfamily protein | [more] |