Lag0012563 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0012563
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Pectate lyase
Location	chr1: 42235155 .. 42238166 (-)
RNA-Seq Expression	Lag0012563
Synteny	Lag0012563

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGAACGCCCATGGCCACCGAAAGCATTTCAGCCATGGCGTAAATATCTCTCGACCCACTAACGCTCATTCTCCCTCCAATAAATACTCCCCATCTGCACCTGCTTCTCAAAGTTCGACCTCGACGGCGAAGATGGAGTCCTTGCCCTACGCCCGCGTTGATTCGAGCCTCCGAGCGCTTGCGGGTCAGGCCGAGGGCTTCGGCCGCTTTGCCATTGGTGGCCTCCATGGTTCTGTTTATTGCGTCACTAATTTGGCAGGTGGTATTTTTTTTTAATCCTGTTTCTGATCAAATTCAATTTGGGGGTGTCTGAATCGTGCTCGGTTGAGCCGTTTGTCTACGGAGTTGTGGGGTTGTGGAGTGTTTGGATTCAGGAATTGAGATGTTGAAGATTTGGGAATTGCATTTTTTCTTGACTTAGAATGATTGAATTCTTTGCTTTTTCTTGATGTGGAAAACTTTGGAAACTGATGGAAACCAGAGATTTTCCTTTATAAACCATCCCCTTTTTTTGCATTTCCTTGGATTGTTTGAAGTTGGGATTGGAATTCAATTAGTAATTGAGCTGTAGTAAAAGGAGGCTTTTGCCTTAAAGTTCTCTCTTGTTTGGTGTTTGTTTTTGTTTTTGTTTTCTTTCACTTTTTTTGTTTGTTCTGTTGGGTTGGTGGGGTGGAGGAACTGAAGATTTTAAAGTAATTTGGTAATCACAAGAAGGGCTAGGGAGTTAGGAGATTGACAATGTTTCCAAATTTCCTATACATTGTATACAATACTTCTATTTGTTCTGCCTTTCAGGTCATTGAGAAGTCCTTAAATCTGTATTTTGTGCTTGTTGTAGATGATGGTCCGGGATCACTTAGGTTCGGATGTCGTATGAAAGAGCCCCTCTGGATTGTCTTTGAAGTTTCGGGCACAATTAACTTGTCTACATATTTGAGTGTGTCCTCTTATAAGACTGTAGATGGTCGTGGTCAGAGGATAAAAATTACAGGAAAGGGATTGAGGCTGAAGGAATGTGAGCATGTGATTATTTGTAATTTGGAGTTTGAAGGTGGTAGAGGTCATGATGTCGATGGAATTCAAATTAAACCTAATTCAAAGCACATATGGATAGACCGTTGCAGCCTCCGAGATTATGATGATGGGTTGATCGATATCACCCGAGGAAGCACAGATATCACTATTTCTAGGTGAGAGGAAGCTTCATCTAAGAGTAATGCCCAAACAGTTTGATATTGTGCTTGATTTCTTTGTCCATTGTCTGTCTGTAGGTGTCTCTTCTCACAGCATGACAAGACAATGCTCATTGGAGCAGATCCCTCTCACATTGGTGACCGATGTATCCGTGTCACTATTCACCACTGTTTTTTCGATGGTACACGTCAACGACATCCACGCGTTAGATACGCTCAAGTACATTTATACAATAATTACACCAGAAACTGGGGGATCTATGCTGTCTGTGCTAGCGTAGAATCAAAGGTCTTGCCACATCTCACCTTTTCGAAATACATTTTAGTTCACACTTCTCCAAAGATTAACCATCTTTTCCAATAGTCACTGTGATTTTAATTTGTTGCTACGTTTTGAATCAGATATACTCTCAGTGCAACATATACGAAGCGGGAGAGAAAAAGGTGGCATTTAAATATTTAACTGAAAAGGTAAATTTATTCTTTTCCATTCTCTATGATTTGATTCCACATGTAGATTGTCTTTAGTCAAATCGACACATGATAAGATTAGATTAGGGAACTTGAGAGGTAATCTCACAATTGTGAAATCTTAGATTTTTATGCTTCTAAAGTGATATCCCTTCGTCTCCATGATGAATTTACCCTTGTGAGTGCCCTATTTTCTGTAATTTCACTCTATGCGTCCTTAAACAATGATGTAACTAAAAACATACTAGTATTGAGAACTCATATTGCCATAGGACGAATGAAGTTTTGTGATGATTTGGGTCTTGATTTTATTACACACGAGACTGCTCGTTATAATATTCTCTGTCCCATGATAAAAGTAGTTGTCTTGTTCACGTTCTCGATTCCATTCGATCTTTGCAACTGTATGTGGAATAAAATCATATTGTTCATGAACAGTTTCTTCATACATTGTAGTAAAATGTTAACCAAAATGCCTATTTGATCATTGCCCAGCCTCACACATCACATGTCCATTCCCACTCCCCTAACCTTCTTTCTACAGAGAAATTATTTGGGGATGGTACAATGTGGCTGGCGGTATTAGTTTTATACCATTAGATACAGGAGAGAGAAACTAAAATTATTGTTTCACCATACATCCAATAGCATAGAGAGTGTGGCAGCCGCAATGTGGCGGCCGGTCACATTGAATATATTTCCTCTCTTTGATATACATTAAAAATTGGGGGCCTATTGTCTCTCTCTCTCTCTCTGTCTAGCTGCCTGTCTGTCCTTAATCTCTAACTGTCTCTGTTTGTGTGTGCATCTCGTTATGCCTGCACGTGCACGTCTGATGCCCGCACGTGCACGTTTCTTTTCAAGACCAGACGATGTTTGGTTAGTCTGCAACTGCTGAATTTCTTAATCCATCAAACTAAAATCCCACATTCTCAAATCTCCACTAGTCTAAACAGATATGAACATTCAAATTCCTTAAAAAGAACACACTCAAGACCAAACTGCCAATAATTTCTGTTTAACAAAACAACCTTTACGCTTCGAAAAAACCGAGGAAACCACCTGTACTAAACTGGAATCATTGTTTATATGTCTGATATGTGTCCAGGCAACAGACAAGGAAGAGCCTTCAAGTGGATGCATATGGTCTGATGGAGATTTATTTCTAAGTTGCACTCAAAGTGGGCTGTTGGCTGCAACTGCTGAACATAACTTGTTTCATCCCTCACAACATTACTCTGCTTGGACTGTGGAACCTCCAACAGATTCTCTCAAACATATTCTCCAACATTGTACTGGATGCCAAAACATCCCAAGGCCCACTGATCAGCCACTGGTACCTTAG

mRNA sequence

ATGGGGAACGCCCATGGCCACCGAAAGCATTTCAGCCATGGCGTAAATATCTCTCGACCCACTAACGCTCATTCTCCCTCCAATAAATACTCCCCATCTGCACCTGCTTCTCAAAGTTCGACCTCGACGGCGAAGATGGAGTCCTTGCCCTACGCCCGCGTTGATTCGAGCCTCCGAGCGCTTGCGGGTCAGGCCGAGGGCTTCGGCCGCTTTGCCATTGGTGGCCTCCATGGTTCTGTTTATTGCGTCACTAATTTGGCAGATGATGGTCCGGGATCACTTAGGTTCGGATGTCGTATGAAAGAGCCCCTCTGGATTGTCTTTGAAGTTTCGGGCACAATTAACTTGTCTACATATTTGAGTGTGTCCTCTTATAAGACTGTAGATGGTCGTGGTCAGAGGATAAAAATTACAGGAAAGGGATTGAGGCTGAAGGAATGTGAGCATGTGATTATTTGTAATTTGGAGTTTGAAGGTGGTAGAGGTCATGATGTCGATGGAATTCAAATTAAACCTAATTCAAAGCACATATGGATAGACCGTTGCAGCCTCCGAGATTATGATGATGGGTTGATCGATATCACCCGAGGAAGCACAGATATCACTATTTCTAGGTGTCTCTTCTCACAGCATGACAAGACAATGCTCATTGGAGCAGATCCCTCTCACATTGGTGACCGATGTATCCGTGTCACTATTCACCACTGTTTTTTCGATGGTACACGTCAACGACATCCACGCGTTAGATACGCTCAAGTACATTTATACAATAATTACACCAGAAACTGGGGGATCTATGCTGTCTGTGCTAGCGTAGAATCAAAGATATACTCTCAGTGCAACATATACGAAGCGGGAGAGAAAAAGGTGGCATTTAAATATTTAACTGAAAAGGCAACAGACAAGGAAGAGCCTTCAAGTGGATGCATATGGTCTGATGGAGATTTATTTCTAAGTTGCACTCAAAGTGGGCTGTTGGCTGCAACTGCTGAACATAACTTGTTTCATCCCTCACAACATTACTCTGCTTGGACTGTGGAACCTCCAACAGATTCTCTCAAACATATTCTCCAACATTGTACTGGATGCCAAAACATCCCAAGGCCCACTGATCAGCCACTGGTACCTTAG

Coding sequence (CDS)

ATGGGGAACGCCCATGGCCACCGAAAGCATTTCAGCCATGGCGTAAATATCTCTCGACCCACTAACGCTCATTCTCCCTCCAATAAATACTCCCCATCTGCACCTGCTTCTCAAAGTTCGACCTCGACGGCGAAGATGGAGTCCTTGCCCTACGCCCGCGTTGATTCGAGCCTCCGAGCGCTTGCGGGTCAGGCCGAGGGCTTCGGCCGCTTTGCCATTGGTGGCCTCCATGGTTCTGTTTATTGCGTCACTAATTTGGCAGATGATGGTCCGGGATCACTTAGGTTCGGATGTCGTATGAAAGAGCCCCTCTGGATTGTCTTTGAAGTTTCGGGCACAATTAACTTGTCTACATATTTGAGTGTGTCCTCTTATAAGACTGTAGATGGTCGTGGTCAGAGGATAAAAATTACAGGAAAGGGATTGAGGCTGAAGGAATGTGAGCATGTGATTATTTGTAATTTGGAGTTTGAAGGTGGTAGAGGTCATGATGTCGATGGAATTCAAATTAAACCTAATTCAAAGCACATATGGATAGACCGTTGCAGCCTCCGAGATTATGATGATGGGTTGATCGATATCACCCGAGGAAGCACAGATATCACTATTTCTAGGTGTCTCTTCTCACAGCATGACAAGACAATGCTCATTGGAGCAGATCCCTCTCACATTGGTGACCGATGTATCCGTGTCACTATTCACCACTGTTTTTTCGATGGTACACGTCAACGACATCCACGCGTTAGATACGCTCAAGTACATTTATACAATAATTACACCAGAAACTGGGGGATCTATGCTGTCTGTGCTAGCGTAGAATCAAAGATATACTCTCAGTGCAACATATACGAAGCGGGAGAGAAAAAGGTGGCATTTAAATATTTAACTGAAAAGGCAACAGACAAGGAAGAGCCTTCAAGTGGATGCATATGGTCTGATGGAGATTTATTTCTAAGTTGCACTCAAAGTGGGCTGTTGGCTGCAACTGCTGAACATAACTTGTTTCATCCCTCACAACATTACTCTGCTTGGACTGTGGAACCTCCAACAGATTCTCTCAAACATATTCTCCAACATTGTACTGGATGCCAAAACATCCCAAGGCCCACTGATCAGCCACTGGTACCTTAG

Protein sequence

MGNAHGHRKHFSHGVNISRPTNAHSPSNKYSPSAPASQSSTSTAKMESLPYARVDSSLRALAGQAEGFGRFAIGGLHGSVYCVTNLADDGPGSLRFGCRMKEPLWIVFEVSGTINLSTYLSVSSYKTVDGRGQRIKITGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCLFSQHDKTMLIGADPSHIGDRCIRVTIHHCFFDGTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKATDKEEPSSGCIWSDGDLFLSCTQSGLLAATAEHNLFHPSQHYSAWTVEPPTDSLKHILQHCTGCQNIPRPTDQPLVP

Homology

[Close]

BLAST of Lag0012563 vs. NCBI nr
Match: XP_008447420.1 (PREDICTED: probable pectate lyase 4 [Cucumis melo] >KAA0047334.1 putative pectate lyase 4 [Cucumis melo var. makuwa])

HSP 1 Score: 716.5 bits (1848), Expect = 1.2e-202
Identity = 339/376 (90.16%), Postives = 355/376 (94.41%), Query Frame = 0


Query: 1   MGNAHGHRKHFSHGVNISRPTNAHSPSNKYSPSAPASQSSTSTAKMESLPYARVDSSLRA 60
           MGNAHGHRKHF+HGVNIS  TNA  PSNKYS S P S++S+S+  MESLPY  VDSSLRA
Sbjct: 1   MGNAHGHRKHFNHGVNISPTTNAPFPSNKYSSSEPTSRNSSSSTNMESLPYPHVDSSLRA 60

Query: 61  LAGQAEGFGRFAIGGLHGSVYCVTNLADDGPGSLRFGCRMKEPLWIVFEVSGTINLSTYL 120
           LA QAEGFGR AIGGLHGSVYCVTNL+DDGPGSLRFGCRMKEPLWI+FEVSGTI+LS+Y+
Sbjct: 61  LAAQAEGFGRSAIGGLHGSVYCVTNLSDDGPGSLRFGCRMKEPLWIIFEVSGTIDLSSYV 120

Query: 121 SVSSYKTVDGRGQRIKITGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWID 180
           SVSSYKTVDGRGQRIK+TGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWID
Sbjct: 121 SVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWID 180

Query: 181 RCSLRDYDDGLIDITRGSTDITISRCLFSQHDKTMLIGADPSHIGDRCIRVTIHHCFFDG 240
           RCSLRDYDDGLIDITRGSTDITISRC FS HDKTMLIGADPSHIGDRCIRVTIHHCFFDG
Sbjct: 181 RCSLRDYDDGLIDITRGSTDITISRCYFSHHDKTMLIGADPSHIGDRCIRVTIHHCFFDG 240

Query: 241 TRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKAT 300
           TRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKAT
Sbjct: 241 TRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKAT 300

Query: 301 DKEEPSSGCIWSDGDLFLSCTQSGLLAATAEHNLFHPSQHYSAWTVEPPTDSLKHILQHC 360
           DKEEPSSG IWSDGDLF+  TQSGLLA TAEHN+FHPS+HY+ WTVEP TD+LKHILQHC
Sbjct: 301 DKEEPSSGTIWSDGDLFVKGTQSGLLAPTAEHNMFHPSEHYTNWTVEPATDALKHILQHC 360

Query: 361 TGCQNIPRPTDQPLVP 377
           TGCQNIPRPTDQPLVP
Sbjct: 361 TGCQNIPRPTDQPLVP 376

[Close]

BLAST of Lag0012563 vs. NCBI nr
Match: XP_038883952.1 (probable pectate lyase 4 [Benincasa hispida])

HSP 1 Score: 714.9 bits (1844), Expect = 3.6e-202
Identity = 340/377 (90.19%), Postives = 355/377 (94.16%), Query Frame = 0


Query: 1   MGNAHGHRKHFSHGVNIS-RPTNAHSPSNKYSPSAPASQSSTSTAKMESLPYARVDSSLR 60
           MGN HGHRKHF+H VN S   TNAH PSNKYSPS P  ++S+ST KMESLPYA VDSSLR
Sbjct: 1   MGNGHGHRKHFNHDVNSSPSTTNAHFPSNKYSPSQPTFRNSSSTTKMESLPYAHVDSSLR 60

Query: 61  ALAGQAEGFGRFAIGGLHGSVYCVTNLADDGPGSLRFGCRMKEPLWIVFEVSGTINLSTY 120
           ALA QAEGFGR AIGGLHGSVYCVTNLADDGPGSLRFGCR KEPLWI+FEVSGTI+LS+Y
Sbjct: 61  ALAAQAEGFGRSAIGGLHGSVYCVTNLADDGPGSLRFGCRKKEPLWIIFEVSGTIHLSSY 120

Query: 121 LSVSSYKTVDGRGQRIKITGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWI 180
           LSVSSYKT+DGRGQRIK+TGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWI
Sbjct: 121 LSVSSYKTIDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWI 180

Query: 181 DRCSLRDYDDGLIDITRGSTDITISRCLFSQHDKTMLIGADPSHIGDRCIRVTIHHCFFD 240
           DRCSLRDYDDGLIDITRGSTDITISRC FS HDKTMLIGADPSHIGDRCIRVTIHHCFFD
Sbjct: 181 DRCSLRDYDDGLIDITRGSTDITISRCHFSHHDKTMLIGADPSHIGDRCIRVTIHHCFFD 240

Query: 241 GTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKA 300
           GTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVES+IYSQCNIYEAGEKKVAFKYLTEKA
Sbjct: 241 GTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESQIYSQCNIYEAGEKKVAFKYLTEKA 300

Query: 301 TDKEEPSSGCIWSDGDLFLSCTQSGLLAATAEHNLFHPSQHYSAWTVEPPTDSLKHILQH 360
           TDKEEPSSGCIWSDGDLF++ TQSGLLAATA HN FHPS+HYS+WTVEPPTDSLK ILQH
Sbjct: 301 TDKEEPSSGCIWSDGDLFVNGTQSGLLAATAGHNFFHPSKHYSSWTVEPPTDSLKQILQH 360

Query: 361 CTGCQNIPRPTDQPLVP 377
           CTGCQN+PRPTD PLVP
Sbjct: 361 CTGCQNMPRPTDLPLVP 377

[Close]

BLAST of Lag0012563 vs. NCBI nr
Match: XP_004142093.1 (probable pectate lyase 4 [Cucumis sativus] >KGN54214.1 hypothetical protein Csa_017940 [Cucumis sativus])

HSP 1 Score: 709.5 bits (1830), Expect = 1.5e-200
Identity = 336/376 (89.36%), Postives = 352/376 (93.62%), Query Frame = 0


Query: 1   MGNAHGHRKHFSHGVNISRPTNAHSPSNKYSPSAPASQSSTSTAKMESLPYARVDSSLRA 60
           MGNAHGHRKHF+HGVN S  TNA SPSNKYS S P S++ +S+  M+SLPY  VDSSLRA
Sbjct: 1   MGNAHGHRKHFNHGVNTSPTTNAPSPSNKYSSSEPTSRNPSSSTNMQSLPYPHVDSSLRA 60

Query: 61  LAGQAEGFGRFAIGGLHGSVYCVTNLADDGPGSLRFGCRMKEPLWIVFEVSGTINLSTYL 120
           LA QAEGFGR AIGGLHGSVYCVTNLADDGPGSLRFGCRMKEPLWI+FEVSGTI+LS+YL
Sbjct: 61  LAAQAEGFGRSAIGGLHGSVYCVTNLADDGPGSLRFGCRMKEPLWIIFEVSGTIDLSSYL 120

Query: 121 SVSSYKTVDGRGQRIKITGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWID 180
           SVSSYKTVDGRGQRIK+TGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWID
Sbjct: 121 SVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWID 180

Query: 181 RCSLRDYDDGLIDITRGSTDITISRCLFSQHDKTMLIGADPSHIGDRCIRVTIHHCFFDG 240
           RCSLRDYDDGLIDITR STDITISRC FS HDKTMLIGADPSHIGDRCIRVTIHHCFFDG
Sbjct: 181 RCSLRDYDDGLIDITRASTDITISRCYFSHHDKTMLIGADPSHIGDRCIRVTIHHCFFDG 240

Query: 241 TRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKAT 300
           TRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKAT
Sbjct: 241 TRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKAT 300

Query: 301 DKEEPSSGCIWSDGDLFLSCTQSGLLAATAEHNLFHPSQHYSAWTVEPPTDSLKHILQHC 360
           DKE+PSSG IWSDGDLF+  TQSGLLA TAEH+LFHPS HYS+WTV+P TD+LKHILQHC
Sbjct: 301 DKEKPSSGSIWSDGDLFVKDTQSGLLAPTAEHDLFHPSHHYSSWTVQPATDALKHILQHC 360

Query: 361 TGCQNIPRPTDQPLVP 377
           TGCQNIPRP DQPLVP
Sbjct: 361 TGCQNIPRPADQPLVP 376

[Close]

BLAST of Lag0012563 vs. NCBI nr
Match: XP_022963206.1 (probable pectate lyase 4 [Cucurbita moschata])

HSP 1 Score: 706.1 bits (1821), Expect = 1.7e-199
Identity = 332/376 (88.30%), Postives = 355/376 (94.41%), Query Frame = 0


Query: 1   MGNAHGHRKHFSHGVNISRPTNAHSPSNKYSPSAPASQSSTSTAKMESLPYARVDSSLRA 60
           MGNAHGHRKHF+HGVN S  TNAHSPSNKY+PS  A   STSTA+MESLPYA VDS LRA
Sbjct: 1   MGNAHGHRKHFNHGVNSSPSTNAHSPSNKYAPSGSAPPISTSTAEMESLPYALVDSRLRA 60

Query: 61  LAGQAEGFGRFAIGGLHGSVYCVTNLADDGPGSLRFGCRMKEPLWIVFEVSGTINLSTYL 120
           LAGQAEGFGR AIGGLHGSVYCVTNL DDGPGSLRFGCRMKEPLWI+FEVSGTI+LS+YL
Sbjct: 61  LAGQAEGFGRAAIGGLHGSVYCVTNLEDDGPGSLRFGCRMKEPLWIIFEVSGTIHLSSYL 120

Query: 121 SVSSYKTVDGRGQRIKITGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWID 180
           +VSS+KTVDGRGQRIK+TGKGLRLKECEHVIICNLEFEGGRGHD+DGIQIKPNS+HIWID
Sbjct: 121 NVSSFKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDIDGIQIKPNSRHIWID 180

Query: 181 RCSLRDYDDGLIDITRGSTDITISRCLFSQHDKTMLIGADPSHIGDRCIRVTIHHCFFDG 240
           RCSL+DYDDGLIDITRGSTDITISRC FS+HDKTMLIGADPSH+GDRCIRVTIHHCFFDG
Sbjct: 181 RCSLQDYDDGLIDITRGSTDITISRCRFSRHDKTMLIGADPSHVGDRCIRVTIHHCFFDG 240

Query: 241 TRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKAT 300
           TRQRHPRVRY +VHLYNNYTRNWGIYAVCASVES+I+SQCNIYEAG+KKVAFKYLTEKAT
Sbjct: 241 TRQRHPRVRYGKVHLYNNYTRNWGIYAVCASVESQIHSQCNIYEAGQKKVAFKYLTEKAT 300

Query: 301 DKEEPSSGCIWSDGDLFLSCTQSGLLAATAEHNLFHPSQHYSAWTVEPPTDSLKHILQHC 360
           DKEEPSSGCIWS+GDLF+S TQSGLLAATA  ++FHPS HYSAWTVEPPTD+LK ILQHC
Sbjct: 301 DKEEPSSGCIWSEGDLFVSGTQSGLLAATAGQSMFHPSDHYSAWTVEPPTDALKQILQHC 360

Query: 361 TGCQNIPRPTDQPLVP 377
           TGCQNIPRP D PLVP
Sbjct: 361 TGCQNIPRPCDLPLVP 376

[Close]

BLAST of Lag0012563 vs. NCBI nr
Match: XP_022972631.1 (probable pectate lyase 4 [Cucurbita maxima])

HSP 1 Score: 706.1 bits (1821), Expect = 1.7e-199
Identity = 331/376 (88.03%), Postives = 355/376 (94.41%), Query Frame = 0


Query: 1   MGNAHGHRKHFSHGVNISRPTNAHSPSNKYSPSAPASQSSTSTAKMESLPYARVDSSLRA 60
           MGNAHGHRKHF+HGVN S  TNAHSPSNKY+PS  A   STSTAKMESLPYA VDSSLRA
Sbjct: 3   MGNAHGHRKHFNHGVNSSPSTNAHSPSNKYTPSGSAPPISTSTAKMESLPYALVDSSLRA 62

Query: 61  LAGQAEGFGRFAIGGLHGSVYCVTNLADDGPGSLRFGCRMKEPLWIVFEVSGTINLSTYL 120
           LAGQAEGFGR +IGGLHGSVYCVTNL DDGPGSLRFGCRMKEPLWI+FEVSGTI+LS+YL
Sbjct: 63  LAGQAEGFGRASIGGLHGSVYCVTNLEDDGPGSLRFGCRMKEPLWIIFEVSGTIHLSSYL 122

Query: 121 SVSSYKTVDGRGQRIKITGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWID 180
           +VSS+KTVDGRGQRIK+TGKGLRLKECEHVIICNLEFEGGRGHD+DGIQIKPNS+HIWID
Sbjct: 123 NVSSFKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDIDGIQIKPNSRHIWID 182

Query: 181 RCSLRDYDDGLIDITRGSTDITISRCLFSQHDKTMLIGADPSHIGDRCIRVTIHHCFFDG 240
           RCSL+DYDDGLIDITRGSTDIT+SRC FS+HDKTMLIGADPSHIGDRCIRVTIHHCFFDG
Sbjct: 183 RCSLQDYDDGLIDITRGSTDITVSRCRFSRHDKTMLIGADPSHIGDRCIRVTIHHCFFDG 242

Query: 241 TRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKAT 300
           TRQRHPRVRY ++HLYNNYTRNWGIYAVCASVES+I+SQCNIYEAG+KKVAFKYLTEKAT
Sbjct: 243 TRQRHPRVRYGKIHLYNNYTRNWGIYAVCASVESQIHSQCNIYEAGQKKVAFKYLTEKAT 302

Query: 301 DKEEPSSGCIWSDGDLFLSCTQSGLLAATAEHNLFHPSQHYSAWTVEPPTDSLKHILQHC 360
           DKEEPSSGCIWS+GDLF+S TQSGLL ATA  ++FHPS HYSAWTVEPPTD+LK ILQHC
Sbjct: 303 DKEEPSSGCIWSEGDLFVSGTQSGLLPATAGQSMFHPSDHYSAWTVEPPTDALKQILQHC 362

Query: 361 TGCQNIPRPTDQPLVP 377
           TGCQNIPRP D PLVP
Sbjct: 363 TGCQNIPRPCDLPLVP 378

[Close]

BLAST of Lag0012563 vs. ExPASy Swiss-Prot
Match: Q9C8G4 (Probable pectate lyase 4 OS=Arabidopsis thaliana OX=3702 GN=At1g30350 PE=2 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.2e-45
Identity = 102/241 (42.32%), Postives = 145/241 (60.17%), Query Frame = 0


Query: 59  RALAGQAEGFGRFAIGGLHGSVYCVTNLADD----GPGSLRFGCRMKEPLWIVFEVSGTI 118
           +ALA  A G+G+ AIGG +G +Y VTN +D+     PG+LR+     +PLWI F     I
Sbjct: 53  QALAHCAVGYGKAAIGGKNGPIYVVTNPSDNPTRPSPGTLRYAVSQPKPLWITFARDMVI 112

Query: 119 NLSTYLSVSSYKTVDGRGQRIKI-TGKGLRLKECEHVIICNLEFEGGR----GHDVDGIQ 178
            L + L ++SYKT+DGRG +++I  G  LR+++ +HVII  +     +    G D DGI+
Sbjct: 113 VLKSQLMINSYKTIDGRGAKVEIANGPCLRIRQVKHVIIHGISIHDCKADPNGMDGDGIR 172

Query: 179 IKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCLFSQHDKTMLIGADPSHIGDRCI 238
           +   S H+WID C L    DGLID+   ST +TIS   F+QHDK ML+G D S++GD+ +
Sbjct: 173 VF-QSTHVWIDHCFLSRCHDGLIDVIVSSTAVTISNNYFTQHDKVMLLGHDDSYMGDKDM 232

Query: 239 RVTI-HHCFFDGTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEK 290
           RVTI  + F  G  +R PRVR    H+ NN    W +YA+  S    I+S+ N + A EK
Sbjct: 233 RVTIAFNTFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSANPIIFSEGNYFVAPEK 292

[Close]

BLAST of Lag0012563 vs. ExPASy Swiss-Prot
Match: Q9FM66 (Putative pectate lyase 21 OS=Arabidopsis thaliana OX=3702 GN=At5g55720 PE=3 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.6e-43
Identity = 108/275 (39.27%), Postives = 145/275 (52.73%), Query Frame = 0


Query: 61  LAGQAEGFGRFAIGGLHGSVYCVTNLADDG-----PGSLRFGCRMKEPLWIVFEVSGTIN 120
           LA  A GFGR +IGG  G  Y VT+  DD      PG+LR+     +PLWI+F+    I 
Sbjct: 68  LADCAVGFGRDSIGGRAGEFYTVTDSGDDNPLNPTPGTLRYAATQDQPLWIIFDRDMVIQ 127

Query: 121 LSTYLSVSSYKTVDGRGQRIKIT-GKGLRLKECEHVIICNLEFEG------------GRG 180
           L   L V+SYKT+DGRG  ++I  G  L L +  ++II NL                G  
Sbjct: 128 LKQDLQVASYKTIDGRGNNVQIAYGPCLTLYKVSNIIINNLYIHDCVPVKRNALSSLGGY 187

Query: 181 HDVDGIQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCLFSQHDKTMLIGADPS 240
            D DGI I   S+ IWID C+L    DGLID   GSTDITIS      H++ ML+G    
Sbjct: 188 SDGDGISIF-ESRDIWIDHCTLEKCYDGLIDAVNGSTDITISNSYMLNHNEVMLLGHSDE 247

Query: 241 HIGDRCIRVTIHHCFF-DGTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCN 300
           + GDR +RVTI   +F +G  QR PR R+   H+ NN  R+W +YA+  S    I+SQ N
Sbjct: 248 YSGDRDMRVTIAFNYFGEGLVQRMPRCRHGYFHIVNNIYRDWKMYAIGGSANPTIFSQGN 307

Query: 301 IYEAGEKKVAFKYLTEKATDKEEPSSGCIW-SDGD 316
           ++ A   +   +    ++ D +E      W S+GD
Sbjct: 308 VFIASNNQFTKEVTKRESADGDEEWKEWNWKSEGD 341

[Close]

BLAST of Lag0012563 vs. ExPASy Swiss-Prot
Match: Q93Z04 (Probable pectate lyase 13 OS=Arabidopsis thaliana OX=3702 GN=PMR6 PE=1 SV=1)

HSP 1 Score: 174.1 bits (440), Expect = 3.0e-42
Identity = 134/393 (34.10%), Postives = 191/393 (48.60%), Query Frame = 0


Query: 5   HGHRKHFSHGVNISRPTNAHSPSNKYSPSAPASQSSTSTAKMESLPYARVDSSLRA---- 64
           H H    S  +++ R  N      + S  + +S SS+S++         +D   R     
Sbjct: 32  HQHPSPDSVALHVIRSVNESLARRQLSSPSSSSSSSSSSSSSSCRTGNPIDDCWRCSDAD 91

Query: 65  -------LAGQAEGFGRFAIGGLHGSVYCVTNLADDG-----PGSLRFGCRMKEPLWIVF 124
                  LA  + GFG   +GG +G +Y VT+ +D+      PG+LR+G   +EPLWIVF
Sbjct: 92  WSTNRQRLADCSIGFGHGTLGGKNGKIYVVTDSSDNNPTNPTPGTLRYGVIQEEPLWIVF 151

Query: 125 EVSGTINLSTYLSVSSYKTVDGRGQRIKITGKG-LRLKECEHVIICNLE---------FE 184
             +  I L   L ++SYKT+DGRG  + ITG G L L+  +H+II NL          FE
Sbjct: 152 SSNMLIRLKQELIINSYKTLDGRGSAVHITGNGCLTLQYVQHIIIHNLHIYDCKPSAGFE 211

Query: 185 GGRGHDVDGIQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCLFSQHDKTMLIG 244
                D DGI I   S+ IW+D CS+    DGLID   GST ITIS   F+ HD+ ML+G
Sbjct: 212 KRGRSDGDGISIF-GSQKIWVDHCSMSHCTDGLIDAVMGSTAITISNNYFTHHDEVMLLG 271

Query: 245 ADPSHIGDRCIRVTI-HHCFFDGTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIY 304
            D ++  D  ++VTI  + F  G  QR PR R   +H+ NN    W +YA+  S    I 
Sbjct: 272 HDDNYAPDTGMQVTIAFNHFGQGLVQRMPRCRRGYIHVVNNDFTEWKMYAIGGSGNPTIN 331

Query: 305 SQCNIYEAGEKKVAFKYLTEKATDKEEPS-SGCIW-SDGDLFLSCTQSGLLAATAEHNLF 364
           SQ N Y A     A K +T++   K++   S   W ++GDL     ++G     +   + 
Sbjct: 332 SQGNRYSAPSDPSA-KEVTKRVDSKDDGEWSNWNWRTEGDLM----ENGAFFVASGEGM- 391

Query: 365 HPSQHYSAWTVEPPTDSLKHILQHCTGCQNIPR 369
             S +  A +V+P   SL   L    G    PR
Sbjct: 392 -SSMYSKASSVDPKAASLVDQLTRNAGVFGGPR 416

[Close]

BLAST of Lag0012563 vs. ExPASy Swiss-Prot
Match: O65388 (Putative pectate lyase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g11920 PE=3 SV=2)

HSP 1 Score: 171.8 bits (434), Expect = 1.5e-41
Identity = 101/256 (39.45%), Postives = 142/256 (55.47%), Query Frame = 0


Query: 56  SSLRALAGQAEGFGRFAIGGLHGSVYCVTNLADD----GPGSLRFGCRMKEPLWIVFEVS 115
           S+ RALA  A GFG+ A+GG +GS+Y VTN +DD     PG+LR+     +PLWI F   
Sbjct: 51  SNRRALADCAVGFGKSAVGGKYGSIYVVTNPSDDPENPRPGTLRYAVIQSKPLWITFARD 110

Query: 116 GTINLSTYLSVSSYKTVDGRGQRIKIT-GKGLRLKECEHVIICNLEF------EGGR--- 175
             I L   L ++SYKT+DGRG +++I  G  + ++   HVII  +        + GR   
Sbjct: 111 MVIVLRNELIMNSYKTIDGRGAKVEIAYGPCITIQHVSHVIIHGISIHDCKPGKSGRVRS 170

Query: 176 ---------GHDVDGIQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCLFSQHD 235
                    G D D I I  +S HIWID C      DGLID+   ST +TIS   F+QHD
Sbjct: 171 SPTHVGSRKGSDGDAIAIF-DSSHIWIDHCFFSRCQDGLIDVLHASTAVTISNNYFTQHD 230

Query: 236 KTMLIGADPSHIGDRCIRVTI-HHCFFDGTRQRHPRVRYAQVHLYNNYTRNWGIYAVCAS 288
           K ML+G + +++ D+ +RVTI  + F  G  +R PRVR    H+ NN    W +YA+  S
Sbjct: 231 KVMLLGHNDNNVEDKIMRVTIAFNHFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGS 290

[Close]

BLAST of Lag0012563 vs. ExPASy Swiss-Prot
Match: P27761 (Pectate lyase 2 OS=Ambrosia artemisiifolia OX=4212 PE=1 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 1.3e-40
Identity = 108/323 (33.44%), Postives = 153/323 (47.37%), Query Frame = 0


Query: 55  DSSLRALAGQAEGFGRFAIGGLHGSVYCVTNLADDG-----PGSLRFGCRMKEPLWIVFE 114
           +++ +ALA  A+GF +   GG  G VY VT+  DD       G+LRF      PLWI+F+
Sbjct: 62  ENNRQALADCAQGFAKGTYGGKWGDVYTVTSNLDDDVANPKEGTLRFAAAQNRPLWIIFK 121

Query: 115 VSGTINLSTYLSVSSYKTVDGRGQRIKITGKGLRLKECEHVIICNLEFE------GGRGH 174
               INL+  L V+S KT+DGRG +++I   GL L   +++II N+         GG   
Sbjct: 122 NDMVINLNQELVVNSDKTIDGRGVKVEIINGGLTLMNVKNIIIHNINIHDVKVLPGGMIK 181

Query: 175 DVDGIQI-----------KPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCLFSQHD 234
             DG  I              S  IWID CSL    DGL+D+T GST +TIS C F+Q  
Sbjct: 182 SNDGPPILRQASDGDTINVAGSSQIWIDHCSLSKSFDGLVDVTLGSTHVTISNCKFTQQS 241

Query: 235 KTMLIGADPSHIGDRCIRVTI-HHCFFDGTRQRHPRVRYAQVHLYNNYTRNWGIYAVCAS 294
           K +L+GAD +H+ D+ +  T+  + F D   QR PR R+    + NN    WG YA+  S
Sbjct: 242 KAILLGADDTHVQDKGMLATVAFNMFTDNVDQRMPRCRFGFFQVVNNNYDRWGTYAIGGS 301

Query: 295 VESKIYSQCNIYEAGEKKVAFKYLTEKATDKEEPSSGCIWSDGDLFLSCTQSGLLAATAE 354
               I  Q N + A + ++    L    T   E  +    SD DL        +   +  
Sbjct: 302 SAPTILCQGNRFLAPDDQIKKNVLARTGTGAAESMAWNWRSDKDLL---ENGAIFVTSGS 361

[Close]

BLAST of Lag0012563 vs. ExPASy TrEMBL
Match: A0A5A7TWJ1 (Pectate lyase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G001550 PE=3 SV=1)

HSP 1 Score: 716.5 bits (1848), Expect = 6.0e-203
Identity = 339/376 (90.16%), Postives = 355/376 (94.41%), Query Frame = 0


Query: 1   MGNAHGHRKHFSHGVNISRPTNAHSPSNKYSPSAPASQSSTSTAKMESLPYARVDSSLRA 60
           MGNAHGHRKHF+HGVNIS  TNA  PSNKYS S P S++S+S+  MESLPY  VDSSLRA
Sbjct: 1   MGNAHGHRKHFNHGVNISPTTNAPFPSNKYSSSEPTSRNSSSSTNMESLPYPHVDSSLRA 60

Query: 61  LAGQAEGFGRFAIGGLHGSVYCVTNLADDGPGSLRFGCRMKEPLWIVFEVSGTINLSTYL 120
           LA QAEGFGR AIGGLHGSVYCVTNL+DDGPGSLRFGCRMKEPLWI+FEVSGTI+LS+Y+
Sbjct: 61  LAAQAEGFGRSAIGGLHGSVYCVTNLSDDGPGSLRFGCRMKEPLWIIFEVSGTIDLSSYV 120

Query: 121 SVSSYKTVDGRGQRIKITGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWID 180
           SVSSYKTVDGRGQRIK+TGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWID
Sbjct: 121 SVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWID 180

Query: 181 RCSLRDYDDGLIDITRGSTDITISRCLFSQHDKTMLIGADPSHIGDRCIRVTIHHCFFDG 240
           RCSLRDYDDGLIDITRGSTDITISRC FS HDKTMLIGADPSHIGDRCIRVTIHHCFFDG
Sbjct: 181 RCSLRDYDDGLIDITRGSTDITISRCYFSHHDKTMLIGADPSHIGDRCIRVTIHHCFFDG 240

Query: 241 TRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKAT 300
           TRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKAT
Sbjct: 241 TRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKAT 300

Query: 301 DKEEPSSGCIWSDGDLFLSCTQSGLLAATAEHNLFHPSQHYSAWTVEPPTDSLKHILQHC 360
           DKEEPSSG IWSDGDLF+  TQSGLLA TAEHN+FHPS+HY+ WTVEP TD+LKHILQHC
Sbjct: 301 DKEEPSSGTIWSDGDLFVKGTQSGLLAPTAEHNMFHPSEHYTNWTVEPATDALKHILQHC 360

Query: 361 TGCQNIPRPTDQPLVP 377
           TGCQNIPRPTDQPLVP
Sbjct: 361 TGCQNIPRPTDQPLVP 376

[Close]

BLAST of Lag0012563 vs. ExPASy TrEMBL
Match: A0A1S3BGV0 (Pectate lyase OS=Cucumis melo OX=3656 GN=LOC103489868 PE=3 SV=1)

HSP 1 Score: 716.5 bits (1848), Expect = 6.0e-203
Identity = 339/376 (90.16%), Postives = 355/376 (94.41%), Query Frame = 0


Query: 1   MGNAHGHRKHFSHGVNISRPTNAHSPSNKYSPSAPASQSSTSTAKMESLPYARVDSSLRA 60
           MGNAHGHRKHF+HGVNIS  TNA  PSNKYS S P S++S+S+  MESLPY  VDSSLRA
Sbjct: 1   MGNAHGHRKHFNHGVNISPTTNAPFPSNKYSSSEPTSRNSSSSTNMESLPYPHVDSSLRA 60

Query: 61  LAGQAEGFGRFAIGGLHGSVYCVTNLADDGPGSLRFGCRMKEPLWIVFEVSGTINLSTYL 120
           LA QAEGFGR AIGGLHGSVYCVTNL+DDGPGSLRFGCRMKEPLWI+FEVSGTI+LS+Y+
Sbjct: 61  LAAQAEGFGRSAIGGLHGSVYCVTNLSDDGPGSLRFGCRMKEPLWIIFEVSGTIDLSSYV 120

Query: 121 SVSSYKTVDGRGQRIKITGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWID 180
           SVSSYKTVDGRGQRIK+TGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWID
Sbjct: 121 SVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWID 180

Query: 181 RCSLRDYDDGLIDITRGSTDITISRCLFSQHDKTMLIGADPSHIGDRCIRVTIHHCFFDG 240
           RCSLRDYDDGLIDITRGSTDITISRC FS HDKTMLIGADPSHIGDRCIRVTIHHCFFDG
Sbjct: 181 RCSLRDYDDGLIDITRGSTDITISRCYFSHHDKTMLIGADPSHIGDRCIRVTIHHCFFDG 240

Query: 241 TRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKAT 300
           TRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKAT
Sbjct: 241 TRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKAT 300

Query: 301 DKEEPSSGCIWSDGDLFLSCTQSGLLAATAEHNLFHPSQHYSAWTVEPPTDSLKHILQHC 360
           DKEEPSSG IWSDGDLF+  TQSGLLA TAEHN+FHPS+HY+ WTVEP TD+LKHILQHC
Sbjct: 301 DKEEPSSGTIWSDGDLFVKGTQSGLLAPTAEHNMFHPSEHYTNWTVEPATDALKHILQHC 360

Query: 361 TGCQNIPRPTDQPLVP 377
           TGCQNIPRPTDQPLVP
Sbjct: 361 TGCQNIPRPTDQPLVP 376

[Close]

BLAST of Lag0012563 vs. ExPASy TrEMBL
Match: A0A0A0KZG2 (Pectate lyase OS=Cucumis sativus OX=3659 GN=Csa_4G293240 PE=3 SV=1)

HSP 1 Score: 709.5 bits (1830), Expect = 7.3e-201
Identity = 336/376 (89.36%), Postives = 352/376 (93.62%), Query Frame = 0


Query: 1   MGNAHGHRKHFSHGVNISRPTNAHSPSNKYSPSAPASQSSTSTAKMESLPYARVDSSLRA 60
           MGNAHGHRKHF+HGVN S  TNA SPSNKYS S P S++ +S+  M+SLPY  VDSSLRA
Sbjct: 1   MGNAHGHRKHFNHGVNTSPTTNAPSPSNKYSSSEPTSRNPSSSTNMQSLPYPHVDSSLRA 60

Query: 61  LAGQAEGFGRFAIGGLHGSVYCVTNLADDGPGSLRFGCRMKEPLWIVFEVSGTINLSTYL 120
           LA QAEGFGR AIGGLHGSVYCVTNLADDGPGSLRFGCRMKEPLWI+FEVSGTI+LS+YL
Sbjct: 61  LAAQAEGFGRSAIGGLHGSVYCVTNLADDGPGSLRFGCRMKEPLWIIFEVSGTIDLSSYL 120

Query: 121 SVSSYKTVDGRGQRIKITGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWID 180
           SVSSYKTVDGRGQRIK+TGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWID
Sbjct: 121 SVSSYKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWID 180

Query: 181 RCSLRDYDDGLIDITRGSTDITISRCLFSQHDKTMLIGADPSHIGDRCIRVTIHHCFFDG 240
           RCSLRDYDDGLIDITR STDITISRC FS HDKTMLIGADPSHIGDRCIRVTIHHCFFDG
Sbjct: 181 RCSLRDYDDGLIDITRASTDITISRCYFSHHDKTMLIGADPSHIGDRCIRVTIHHCFFDG 240

Query: 241 TRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKAT 300
           TRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKAT
Sbjct: 241 TRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKAT 300

Query: 301 DKEEPSSGCIWSDGDLFLSCTQSGLLAATAEHNLFHPSQHYSAWTVEPPTDSLKHILQHC 360
           DKE+PSSG IWSDGDLF+  TQSGLLA TAEH+LFHPS HYS+WTV+P TD+LKHILQHC
Sbjct: 301 DKEKPSSGSIWSDGDLFVKDTQSGLLAPTAEHDLFHPSHHYSSWTVQPATDALKHILQHC 360

Query: 361 TGCQNIPRPTDQPLVP 377
           TGCQNIPRP DQPLVP
Sbjct: 361 TGCQNIPRPADQPLVP 376

[Close]

BLAST of Lag0012563 vs. ExPASy TrEMBL
Match: A0A6J1I6H5 (Pectate lyase OS=Cucurbita maxima OX=3661 GN=LOC111471167 PE=3 SV=1)

HSP 1 Score: 706.1 bits (1821), Expect = 8.1e-200
Identity = 331/376 (88.03%), Postives = 355/376 (94.41%), Query Frame = 0


Query: 1   MGNAHGHRKHFSHGVNISRPTNAHSPSNKYSPSAPASQSSTSTAKMESLPYARVDSSLRA 60
           MGNAHGHRKHF+HGVN S  TNAHSPSNKY+PS  A   STSTAKMESLPYA VDSSLRA
Sbjct: 3   MGNAHGHRKHFNHGVNSSPSTNAHSPSNKYTPSGSAPPISTSTAKMESLPYALVDSSLRA 62

Query: 61  LAGQAEGFGRFAIGGLHGSVYCVTNLADDGPGSLRFGCRMKEPLWIVFEVSGTINLSTYL 120
           LAGQAEGFGR +IGGLHGSVYCVTNL DDGPGSLRFGCRMKEPLWI+FEVSGTI+LS+YL
Sbjct: 63  LAGQAEGFGRASIGGLHGSVYCVTNLEDDGPGSLRFGCRMKEPLWIIFEVSGTIHLSSYL 122

Query: 121 SVSSYKTVDGRGQRIKITGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWID 180
           +VSS+KTVDGRGQRIK+TGKGLRLKECEHVIICNLEFEGGRGHD+DGIQIKPNS+HIWID
Sbjct: 123 NVSSFKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDIDGIQIKPNSRHIWID 182

Query: 181 RCSLRDYDDGLIDITRGSTDITISRCLFSQHDKTMLIGADPSHIGDRCIRVTIHHCFFDG 240
           RCSL+DYDDGLIDITRGSTDIT+SRC FS+HDKTMLIGADPSHIGDRCIRVTIHHCFFDG
Sbjct: 183 RCSLQDYDDGLIDITRGSTDITVSRCRFSRHDKTMLIGADPSHIGDRCIRVTIHHCFFDG 242

Query: 241 TRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKAT 300
           TRQRHPRVRY ++HLYNNYTRNWGIYAVCASVES+I+SQCNIYEAG+KKVAFKYLTEKAT
Sbjct: 243 TRQRHPRVRYGKIHLYNNYTRNWGIYAVCASVESQIHSQCNIYEAGQKKVAFKYLTEKAT 302

Query: 301 DKEEPSSGCIWSDGDLFLSCTQSGLLAATAEHNLFHPSQHYSAWTVEPPTDSLKHILQHC 360
           DKEEPSSGCIWS+GDLF+S TQSGLL ATA  ++FHPS HYSAWTVEPPTD+LK ILQHC
Sbjct: 303 DKEEPSSGCIWSEGDLFVSGTQSGLLPATAGQSMFHPSDHYSAWTVEPPTDALKQILQHC 362

Query: 361 TGCQNIPRPTDQPLVP 377
           TGCQNIPRP D PLVP
Sbjct: 363 TGCQNIPRPCDLPLVP 378

[Close]

BLAST of Lag0012563 vs. ExPASy TrEMBL
Match: A0A6J1HFI4 (Pectate lyase OS=Cucurbita moschata OX=3662 GN=LOC111463488 PE=3 SV=1)

HSP 1 Score: 706.1 bits (1821), Expect = 8.1e-200
Identity = 332/376 (88.30%), Postives = 355/376 (94.41%), Query Frame = 0


Query: 1   MGNAHGHRKHFSHGVNISRPTNAHSPSNKYSPSAPASQSSTSTAKMESLPYARVDSSLRA 60
           MGNAHGHRKHF+HGVN S  TNAHSPSNKY+PS  A   STSTA+MESLPYA VDS LRA
Sbjct: 1   MGNAHGHRKHFNHGVNSSPSTNAHSPSNKYAPSGSAPPISTSTAEMESLPYALVDSRLRA 60

Query: 61  LAGQAEGFGRFAIGGLHGSVYCVTNLADDGPGSLRFGCRMKEPLWIVFEVSGTINLSTYL 120
           LAGQAEGFGR AIGGLHGSVYCVTNL DDGPGSLRFGCRMKEPLWI+FEVSGTI+LS+YL
Sbjct: 61  LAGQAEGFGRAAIGGLHGSVYCVTNLEDDGPGSLRFGCRMKEPLWIIFEVSGTIHLSSYL 120

Query: 121 SVSSYKTVDGRGQRIKITGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWID 180
           +VSS+KTVDGRGQRIK+TGKGLRLKECEHVIICNLEFEGGRGHD+DGIQIKPNS+HIWID
Sbjct: 121 NVSSFKTVDGRGQRIKLTGKGLRLKECEHVIICNLEFEGGRGHDIDGIQIKPNSRHIWID 180

Query: 181 RCSLRDYDDGLIDITRGSTDITISRCLFSQHDKTMLIGADPSHIGDRCIRVTIHHCFFDG 240
           RCSL+DYDDGLIDITRGSTDITISRC FS+HDKTMLIGADPSH+GDRCIRVTIHHCFFDG
Sbjct: 181 RCSLQDYDDGLIDITRGSTDITISRCRFSRHDKTMLIGADPSHVGDRCIRVTIHHCFFDG 240

Query: 241 TRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKAT 300
           TRQRHPRVRY +VHLYNNYTRNWGIYAVCASVES+I+SQCNIYEAG+KKVAFKYLTEKAT
Sbjct: 241 TRQRHPRVRYGKVHLYNNYTRNWGIYAVCASVESQIHSQCNIYEAGQKKVAFKYLTEKAT 300

Query: 301 DKEEPSSGCIWSDGDLFLSCTQSGLLAATAEHNLFHPSQHYSAWTVEPPTDSLKHILQHC 360
           DKEEPSSGCIWS+GDLF+S TQSGLLAATA  ++FHPS HYSAWTVEPPTD+LK ILQHC
Sbjct: 301 DKEEPSSGCIWSEGDLFVSGTQSGLLAATAGQSMFHPSDHYSAWTVEPPTDALKQILQHC 360

Query: 361 TGCQNIPRPTDQPLVP 377
           TGCQNIPRP D PLVP
Sbjct: 361 TGCQNIPRPCDLPLVP 376

[Close]

BLAST of Lag0012563 vs. TAIR 10
Match: AT3G55140.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 540.8 bits (1392), Expect = 8.7e-154
Identity = 246/326 (75.46%), Postives = 285/326 (87.42%), Query Frame = 0


Query: 46  MESLPYARVDSSLRALAGQAEGFGRFAIGGLHGSVYCVTNLADDGPGSLRFGCRMKEPLW 105
           M SLPYA  D SLRALAG+AEGFGRFA+GGLHG +Y VT+LADDGPG+LR G R KEPLW
Sbjct: 1   MTSLPYADADCSLRALAGRAEGFGRFAVGGLHGDLYVVTSLADDGPGTLREGGRRKEPLW 60

Query: 106 IVFEVSGTINLSTYLSVSSYKTVDGRGQRIKITGKGLRLKECEHVIICNLEFEGGRGHDV 165
           IVF VSGTINL++YLSVSSYKT+DGRGQRIK+TGKG+RLKECEH+IICNLEFEGGRGHDV
Sbjct: 61  IVFAVSGTINLNSYLSVSSYKTIDGRGQRIKLTGKGIRLKECEHIIICNLEFEGGRGHDV 120

Query: 166 DGIQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCLFSQHDKTMLIGADPSHIG 225
           DGIQIKP S+HIWIDRCSLRDYDDGLIDITR STDIT+SRC F+QHDKTMLIGADPSH+ 
Sbjct: 121 DGIQIKPKSRHIWIDRCSLRDYDDGLIDITRQSTDITVSRCYFAQHDKTMLIGADPSHVE 180

Query: 226 DRCIRVTIHHCFFDGTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEA 285
           DRCIRVTIHHCFFDGTRQR PR+R+ +VHLYNNYTRNWGIYAVCASVE++++SQCNIYEA
Sbjct: 181 DRCIRVTIHHCFFDGTRQRQPRLRFGKVHLYNNYTRNWGIYAVCASVEAQVFSQCNIYEA 240

Query: 286 GEKKVAFKYLTEKATDKEEPSSGCIWSDGDLFLSCTQSGLLAATAEHNLFHPSQHYSAWT 345
           G KK  F+Y +EKA DKEE  +G + S+ DLFL+  Q  L+   +E  +FHPS+HY  WT
Sbjct: 241 GVKKKTFEYYSEKAADKEEARTGLVRSENDLFLNGAQPSLMTGASEECVFHPSEHYPTWT 300

Query: 346 VEPPTDSLKHILQHCTGCQNIPRPTD 372
           VEPP+++LK I+Q CTG Q++ RP+D
Sbjct: 301 VEPPSETLKQIMQICTGWQSLSRPSD 326

[Close]

BLAST of Lag0012563 vs. TAIR 10
Match: AT3G09540.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 492.3 bits (1266), Expect = 3.5e-139
Identity = 246/376 (65.43%), Postives = 292/376 (77.66%), Query Frame = 0


Query: 1   MGNAHG-HRKHFSHGVNI--SRPTNAHSPSNKYSPSAPASQSSTSTAKMESLPYARVDSS 60
           MGN HG HR H   G N     P +   P    +P+   + SS S   M   PY  VDSS
Sbjct: 1   MGNLHGIHRSHHG-GSNFPGEAPNSPFPPPYTAAPAPAPAPSSPSDHHMTVGPYCHVDSS 60

Query: 61  LRALAGQAEGFGRFAIGGLHGSVYCVTNLADDGPGSLRFGCRMKEPLWIVFEVSGTINLS 120
           LR+LAG+AEGFGR A+GGL+G +  VT+LAD+GPGSLR  C+  EPLWIVF+VSGTINLS
Sbjct: 61  LRSLAGKAEGFGRAAVGGLNGPICHVTSLADEGPGSLREACKRPEPLWIVFDVSGTINLS 120

Query: 121 TYLSVSSYKTVDGRGQRIKITGKGLRLKECEHVIICNLEFEGGRGHDVDGIQIKPNSKHI 180
           ++++VSS+ TVDGRGQ++KITGKGLRLKECE+VIICNLEFEGG G D D IQIKP S +I
Sbjct: 121 SFVNVSSHTTVDGRGQKVKITGKGLRLKECENVIICNLEFEGGVGPDADAIQIKPKSHNI 180

Query: 181 WIDRCSLRDYDDGLIDITRGSTDITISRCLFSQHDKTMLIGADPSHIGDRCIRVTIHHCF 240
           WIDRCSL++Y DGLIDITR STDIT+SRC F  H+KTMLIGAD SH+ DRCIRVTIHHCF
Sbjct: 181 WIDRCSLKNYYDGLIDITRESTDITVSRCHFMNHNKTMLIGADTSHVTDRCIRVTIHHCF 240

Query: 241 FDGTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEKKVAFKYLTE 300
           FDGTRQRHPRVR+A+VHL+NNYTR+W IYAV A VES+I+SQCNIYEAGEKK  FKY+TE
Sbjct: 241 FDGTRQRHPRVRFAKVHLFNNYTRHWAIYAVGAGVESQIHSQCNIYEAGEKKTVFKYITE 300

Query: 301 KATDKEEPSSGCIWSDGDLFLSCTQSGLLAATAEHNLFHPSQHYSAWTVEPPTDSLKHIL 360
           KA DKE+P +G + S+GDL L+  +S  L+   E  +F P QHYS WTVE PTD LK+ L
Sbjct: 301 KAADKEKPGAGFVRSEGDLLLNGAKS-CLSQGGERYVFSPIQHYSEWTVESPTDILKNYL 360

Query: 361 QHCTGCQNIPRPTDQP 374
           +H TG QN+P P D+P
Sbjct: 361 KHSTGWQNLPLPLDRP 374

[Close]

BLAST of Lag0012563 vs. TAIR 10
Match: AT3G55140.2 (Pectin lyase-like superfamily protein )

HSP 1 Score: 478.0 bits (1229), Expect = 6.9e-135
Identity = 214/286 (74.83%), Postives = 250/286 (87.41%), Query Frame = 0


Query: 86  LADDGPGSLRFGCRMKEPLWIVFEVSGTINLSTYLSVSSYKTVDGRGQRIKITGKGLRLK 145
           + DDGPG+LR G R KEPLWIVF VSGTINL++YLSVSSYKT+DGRGQRIK+TGKG+RLK
Sbjct: 17  ILDDGPGTLREGGRRKEPLWIVFAVSGTINLNSYLSVSSYKTIDGRGQRIKLTGKGIRLK 76

Query: 146 ECEHVIICNLEFEGGRGHDVDGIQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISR 205
           ECEH+IICNLEFEGGRGHDVDGIQIKP S+HIWIDRCSLRDYDDGLIDITR STDIT+SR
Sbjct: 77  ECEHIIICNLEFEGGRGHDVDGIQIKPKSRHIWIDRCSLRDYDDGLIDITRQSTDITVSR 136

Query: 206 CLFSQHDKTMLIGADPSHIGDRCIRVTIHHCFFDGTRQRHPRVRYAQVHLYNNYTRNWGI 265
           C F+QHDKTMLIGADPSH+ DRCIRVTIHHCFFDGTRQR PR+R+ +VHLYNNYTRNWGI
Sbjct: 137 CYFAQHDKTMLIGADPSHVEDRCIRVTIHHCFFDGTRQRQPRLRFGKVHLYNNYTRNWGI 196

Query: 266 YAVCASVESKIYSQCNIYEAGEKKVAFKYLTEKATDKEEPSSGCIWSDGDLFLSCTQSGL 325
           YAVCASVE++++SQCNIYEAG KK  F+Y +EKA DKEE  +G + S+ DLFL+  Q  L
Sbjct: 197 YAVCASVEAQVFSQCNIYEAGVKKKTFEYYSEKAADKEEARTGLVRSENDLFLNGAQPSL 256

Query: 326 LAATAEHNLFHPSQHYSAWTVEPPTDSLKHILQHCTGCQNIPRPTD 372
           +   +E  +FHPS+HY  WTVEPP+++LK I+Q CTG Q++ RP+D
Sbjct: 257 MTGASEECVFHPSEHYPTWTVEPPSETLKQIMQICTGWQSLSRPSD 302

[Close]

BLAST of Lag0012563 vs. TAIR 10
Match: AT1G30350.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 184.5 bits (467), Expect = 1.6e-46
Identity = 102/241 (42.32%), Postives = 145/241 (60.17%), Query Frame = 0


Query: 59  RALAGQAEGFGRFAIGGLHGSVYCVTNLADD----GPGSLRFGCRMKEPLWIVFEVSGTI 118
           +ALA  A G+G+ AIGG +G +Y VTN +D+     PG+LR+     +PLWI F     I
Sbjct: 53  QALAHCAVGYGKAAIGGKNGPIYVVTNPSDNPTRPSPGTLRYAVSQPKPLWITFARDMVI 112

Query: 119 NLSTYLSVSSYKTVDGRGQRIKI-TGKGLRLKECEHVIICNLEFEGGR----GHDVDGIQ 178
            L + L ++SYKT+DGRG +++I  G  LR+++ +HVII  +     +    G D DGI+
Sbjct: 113 VLKSQLMINSYKTIDGRGAKVEIANGPCLRIRQVKHVIIHGISIHDCKADPNGMDGDGIR 172

Query: 179 IKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCLFSQHDKTMLIGADPSHIGDRCI 238
           +   S H+WID C L    DGLID+   ST +TIS   F+QHDK ML+G D S++GD+ +
Sbjct: 173 VF-QSTHVWIDHCFLSRCHDGLIDVIVSSTAVTISNNYFTQHDKVMLLGHDDSYMGDKDM 232

Query: 239 RVTI-HHCFFDGTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCNIYEAGEK 290
           RVTI  + F  G  +R PRVR    H+ NN    W +YA+  S    I+S+ N + A EK
Sbjct: 233 RVTIAFNTFGPGLIERMPRVRRGYAHVANNRYEKWQMYAIGGSANPIIFSEGNYFVAPEK 292

[Close]

BLAST of Lag0012563 vs. TAIR 10
Match: AT5G55720.1 (Pectin lyase-like superfamily protein )

HSP 1 Score: 178.3 bits (451), Expect = 1.1e-44
Identity = 108/275 (39.27%), Postives = 145/275 (52.73%), Query Frame = 0


Query: 61  LAGQAEGFGRFAIGGLHGSVYCVTNLADDG-----PGSLRFGCRMKEPLWIVFEVSGTIN 120
           LA  A GFGR +IGG  G  Y VT+  DD      PG+LR+     +PLWI+F+    I 
Sbjct: 68  LADCAVGFGRDSIGGRAGEFYTVTDSGDDNPLNPTPGTLRYAATQDQPLWIIFDRDMVIQ 127

Query: 121 LSTYLSVSSYKTVDGRGQRIKIT-GKGLRLKECEHVIICNLEFEG------------GRG 180
           L   L V+SYKT+DGRG  ++I  G  L L +  ++II NL                G  
Sbjct: 128 LKQDLQVASYKTIDGRGNNVQIAYGPCLTLYKVSNIIINNLYIHDCVPVKRNALSSLGGY 187

Query: 181 HDVDGIQIKPNSKHIWIDRCSLRDYDDGLIDITRGSTDITISRCLFSQHDKTMLIGADPS 240
            D DGI I   S+ IWID C+L    DGLID   GSTDITIS      H++ ML+G    
Sbjct: 188 SDGDGISIF-ESRDIWIDHCTLEKCYDGLIDAVNGSTDITISNSYMLNHNEVMLLGHSDE 247

Query: 241 HIGDRCIRVTIHHCFF-DGTRQRHPRVRYAQVHLYNNYTRNWGIYAVCASVESKIYSQCN 300
           + GDR +RVTI   +F +G  QR PR R+   H+ NN  R+W +YA+  S    I+SQ N
Sbjct: 248 YSGDRDMRVTIAFNYFGEGLVQRMPRCRHGYFHIVNNIYRDWKMYAIGGSANPTIFSQGN 307

Query: 301 IYEAGEKKVAFKYLTEKATDKEEPSSGCIW-SDGD 316
           ++ A   +   +    ++ D +E      W S+GD
Sbjct: 308 VFIASNNQFTKEVTKRESADGDEEWKEWNWKSEGD 341

The following BLAST results are available for this feature:

BLAST of Lag0012563 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008447420.1	1.2e-202	90.16	PREDICTED: probable pectate lyase 4 [Cucumis melo] >KAA0047334.1 putative pectat...	[more]
XP_038883952.1	3.6e-202	90.19	probable pectate lyase 4 [Benincasa hispida]	[more]
XP_004142093.1	1.5e-200	89.36	probable pectate lyase 4 [Cucumis sativus] >KGN54214.1 hypothetical protein Csa_...	[more]
XP_022963206.1	1.7e-199	88.30	probable pectate lyase 4 [Cucurbita moschata]	[more]
XP_022972631.1	1.7e-199	88.03	probable pectate lyase 4 [Cucurbita maxima]	[more]

BLAST of Lag0012563 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C8G4	2.2e-45	42.32	Probable pectate lyase 4 OS=Arabidopsis thaliana OX=3702 GN=At1g30350 PE=2 SV=1	[more]
Q9FM66	1.6e-43	39.27	Putative pectate lyase 21 OS=Arabidopsis thaliana OX=3702 GN=At5g55720 PE=3 SV=1	[more]
Q93Z04	3.0e-42	34.10	Probable pectate lyase 13 OS=Arabidopsis thaliana OX=3702 GN=PMR6 PE=1 SV=1	[more]
O65388	1.5e-41	39.45	Putative pectate lyase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g11920 PE=3 SV=2	[more]
P27761	1.3e-40	33.44	Pectate lyase 2 OS=Ambrosia artemisiifolia OX=4212 PE=1 SV=1	[more]

BLAST of Lag0012563 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TWJ1	6.0e-203	90.16	Pectate lyase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G001550...	[more]
A0A1S3BGV0	6.0e-203	90.16	Pectate lyase OS=Cucumis melo OX=3656 GN=LOC103489868 PE=3 SV=1	[more]
A0A0A0KZG2	7.3e-201	89.36	Pectate lyase OS=Cucumis sativus OX=3659 GN=Csa_4G293240 PE=3 SV=1	[more]
A0A6J1I6H5	8.1e-200	88.03	Pectate lyase OS=Cucurbita maxima OX=3661 GN=LOC111471167 PE=3 SV=1	[more]
A0A6J1HFI4	8.1e-200	88.30	Pectate lyase OS=Cucurbita moschata OX=3662 GN=LOC111463488 PE=3 SV=1	[more]

BLAST of Lag0012563 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55140.1	8.7e-154	75.46	Pectin lyase-like superfamily protein	[more]
AT3G09540.1	3.5e-139	65.43	Pectin lyase-like superfamily protein	[more]
AT3G55140.2	6.9e-135	74.83	Pectin lyase-like superfamily protein	[more]
AT1G30350.1	1.6e-46	42.32	Pectin lyase-like superfamily protein	[more]
AT5G55720.1	1.1e-44	39.27	Pectin lyase-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018082	AmbAllergen	PRINTS	PR00807	AMBALLERGEN	coord: 119..135 score: 49.58 coord: 266..285 score: 38.57 coord: 64..81 score: 48.41
IPR002022	Pectate lyase	SMART	SM00656	amb_all	coord: 76..289 e-value: 5.2E-33 score: 125.7
IPR002022	Pectate lyase	PFAM	PF00544	Pectate_lyase_4	coord: 120..281 e-value: 5.9E-26 score: 91.4
IPR012334	Pectin lyase fold	GENE3D	2.160.20.10		coord: 50..356 e-value: 2.7E-90 score: 304.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 15..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..44
None	No IPR available	PANTHER	PTHR31683:SF113	PECTATE LYASE	coord: 43..369
IPR045032	Pectin lyase family	PANTHER	PTHR31683	PECTATE LYASE 18-RELATED	coord: 43..369
IPR003308	Integrase, N-terminal zinc-binding domain	PROSITE	PS50876	ZF_INTEGRASE	coord: 323..364 score: 8.896386
IPR011050	Pectin lyase fold/virulence factor	SUPERFAMILY	51126	Pectin lyase-like	coord: 62..370

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0012563.1	Lag0012563.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0090305	nucleic acid phosphodiester bond hydrolysis
biological_process	GO:0045490	pectin catabolic process
molecular_function	GO:0004519	endonuclease activity
molecular_function	GO:0016779	nucleotidyltransferase activity
molecular_function	GO:0030570	pectate lyase activity
molecular_function	GO:0008270	zinc ion binding