Lag0012499 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0012499
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	UPF0161 protein At3g09310
Location	chr1: 41665265 .. 41669419 (+)
RNA-Seq Expression	Lag0012499
Synteny	Lag0012499

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTTCTTCCCACCACAAACTGCCACACACCCCATAACCAGAACCCAATCTTCTTCGCCAGCCGCTGCCATCAAAGGCACTGCTCCGCCGCCGGCTTCAGTATTCGATTGAATCGCCGAGCGCTCTGTCGGCCGTTAGTCCTTAGCGAAACGCGTGCCACATCGAATTCGAGCGCGAACAGCGAGCAAGGTACTTGTCTCTTCTCCACTCCTTTGTATTTGTATACAATCAACGTATAGACTATGATGAATTAGGGCTCTTGATTCGTTTTCGTAGATGGCGAAGTGGACAATCTGGGGGTTAAAGCTGCATTATCCATGCTTAAATTCTACAAACGTAAGTAGAATGGTGTTATTTGTTCCGTTTTGGGCTTCTAATTCGAAGAATTCTGTCAAAATTCGATCGGAATCGAAGGTAATACGAAACGAATCGTTGAGTACTGATTTTGAGCGAAATGTGCGCAGGAGAAATCTCGCCGCTATTGCCAAATAGTTGTCGCTATTTACCTACGTGTAGTGAGTATTCCATGCAAGCTTACAAAAAATATGGTGTTGCGAAGGGCACAATCTTGACTGCTTGGCGTCTCTGCCGCTGCAATCCCCTTGGTAATGACGTTGCTCTCATTCAAAAGACAGTTCCAAGATGAATAAAAATGATCTCCTTAAACCTTCGGGAATGGAATTTTTCGATGCTTTTTCTTTGATTCGTGATTCTGTACAGTATTGATTCTAGGCCATTGCTTATTTGTAGGTGGATCTGGGTTTGATCCTCCGCGGTGGTTTGATGAAGAAAGGTTGCCAGAACCAGAAGATTGATAATTTCAAATACTGCATAACACGTAAGTACTGATGCAGACCAATAATTTAAGTTCACTGTGATGATTTTCAATCTTCTTTCTTGAGATTTGCATACTTGGCAGAAAGGTGATGGTCATGGAAGTTGAATTTCTGGCATAGAAACTCCTCTGCATTTTTCTTTGTCTAGTTTTGCTCTACATGATAGTAATTTTCAGACTACAAATTAAGGAGGGTTTTGATATTTTGGGGAAGAGAGTTGCAAGAAGGTTCTTAGTGATAGCGTTGATGTGAAAAATGGTGAAAGTGAAAGTTCCCCATGATAAACGAATTCTACATTGAACAAAACTTCGCATTATCAAGACTTCCCACATTGTAAATTAGACTATTCAAGTGTCAAAATAGAGCCATTTTTCCTAATGACTCTGGTTTTTGGCTGGCTAGACCTTTTACAACGCTTGATTAATGAAGAAAATATGTGCAAACTTTCCAATCTTCATATGTTAGATAATTCTATAGGAGTTAGTCCAATTGCTGGTCTTTGACGAACTTAAAACTGTGGTCAAAGTCATCATAGCTCAGACAGTAAGTGGTATGTACCCTCTATCAAGAGATCTAATGACAAACCTAAAACTTTAGATAATATACTAATGGTTAAATTACAAGTTTAGTCCCTGAACTTTGAGGTTTATGTTTATTTGGTTTTGAGCTTTCAAGTTTAGAGACCTATTAGACACAATGTTAAAAGTTTTGGAACCTATTTGACACTTTTTAAAGTTGAGAGACATTTTAAACACAAACGTCAAAGTTCAGAGACTAAACTTGTAATTTAACCTATGCTAATTTATGATAACTCTTCCACGATCAATCCGATTGATCAAATTTTGGAGTACATTTCAAATCATTGTTGATAGGTTGATATTTCCACTATGCCACCAGACTCAATGACATCTAAAAGCTTAAGCTATTAAGTTAGAGTTCATTTATGATTTAATATCTTTCTAATGTCTTAACTCACACATGGGCTCAAATATTCAAATAGACTTCAACACATAAAACTGAAGCCATGTTGAATCACTCTTAGATTAAAAGTTTAAGCTATTGGGGTAAATCCATGTACTTTTTTCCTCTTTTCTGCCCTTTCAGATGGAGTTTCCTGTTCTGTAATTTGAGTTAGTTTAGTTCATTTGCTGAGCTTTTAAGGTTCTTTCAACCTTACCACACAGATTTTCTGCAGGTTGTCCTGGCTAATTTGTTTGATCGTTGTGCTGTGGGCGGGGGAATCTGTGGGAGCTAATGCCCTATGCAGAGTGAGGATTGTTGTAGAAATTAGCATGTATAATTAATTTAATTTTGATATAGAATTAGTATATTATAGAGTATTCTTGAGTAGCCTGACACTTGACAATTATTATTGTTATTTTTTAAATTATTTAATTAACAATTTCCTTGTGTGTTTTGAATTTCTTTTAAATGCCCGTGGAAAGTTCAACAATAAAAGAATAAGGGTCTTGGAATACATTTTAATTTAAATGTTTTTCAAGAATGCATTTTTTAAAAAACATTTTGTATAAAATTTGTTTAGAATTTAAACACTCTGGTTGCATTTCCCCACAAGTTATTGTATGCCCAAATACTCTTTTTTAAAAAGTTAGTTTCAAGTGTTTCTCTCATGGCTTATTTATCAATCTTATTTTCTAATAAGTCATTTTTAGTGGTTGTCAAACACTAATTTTTTTTTCAAAATTAAACATTTGAAAAGTTAAACCAAACACACCCTAATTCTAAAAACGTGATTCTATTTTACCATTGGTCCAATTCTTATGGGGATATTCATGGGCGGGCGAGCAAAGCTTGGGATGCTTCCTCATCCCTATCCCCTATTTAATTTCTTATTATCTTCGTGAACAATTTGCAAAACTTTCCATTTAATTTCATGGAGATCAGGATGAGATTTCTACCGAGAATTTTTATCGAAATTGGTTAAATAATAATAATAATAATTTTCATACAAGATACAATAAAAACATATTTCTAAAATTTATTGAAGAAAAACTGATGGAGACTAGGTTTTTTTTTTTTTTGAGAAAAATGGAGACTAGTTTTAATTTTAAGTTAAATTAGTGATAAACTCAATGTGTGTACCATTTTCTTTTTAAACAAAAGTAGAGAGAGAAAAATAAACTAATTAAAAAGTCTAAAATGATATTTTAAACCAATAAATAATGGAAATAACTTTGTTGCATACATGGAGGGATTTCTCTAAGAAAATTTCTAGTACTACAATAGTATGAAAAATTTTCCATTCTACCTCAATTGATTGTTTGCCATGAAGTGTTAATGATGTGCGATACATGAAATAAAATAGGGAAAAATACACTTTTGGTCCCTGAGGTTTGGGTTAAGTGACACTTAGGTCCATGAGTTTTCAAACTCAACAAAAATACCTCTGAGTTTTGAGATAAGTAGCATTTTGGTCCTTGCCGTCAATTTTTCTGTTAAATCTTAACGGCTGCTGACGTGGCATTATTATTTTAATAAAAAAATTAATTTTTAATTTTTTTAATTAAAAAAATATTATTATTTTATCTTTTTTTTTAAATACTTTTCCCCTTTTCTCTTTCTTCCCCTTCCCCACCTCCTTCTCCTAACTTCTTCTTCCCAACTTCATCTTCTTCAACTCTGGCGGCCGGCCGCCGCCGCCGGCCTCCGGCGAGTTTTTTTTTTTTTTAAAAAAAAAATTTCTTTCTTTCCCTTTCTTTTCTTCTCTCTTCTCTTCCCTTTCTTCACATTTTTTTTCTTTTTTTTTAAATATAGAAGAGGGAGAGGGAGGAGGCTCCTCCCTCCCTTTCCGGCGCCGGTGACGGGAGGAGGGAGGCCCTCCTCCCTCACTGCTTCAGATCTATAAGTTTACAAGCGGAAAGGGATGGCTTTGTCTACAAGCGCAAGAGGCGCCGGCTGGACCCGGCAGAAGCCGTTGCAGCTCGTTCGTCGGTGGCTCAGGAGGCGGCGGACCTTCAGGCGGAGGAGAATCGACGGCGAGAGCGCGGGTGGAAGACGTTGTTGAAGGTTAGAGCGAAGTATCAGAGAGAGATTGAGCAGTGGGAGGTTTTGTCGAACAACTTGCGGGCGATGGAGGAGAGGACTCGGAGGCTGCAAGAACTGTACAGACGGGAAGGGGAAGAAGGAACCGCGTCGCTTCTGGGCGCTTCCTTGTTGAACGTGGTTCAGGAGAAGGAGTTGTCCTGCGCATCAATGGTGGAGGAACTTCTCTCTCAGGTAAATCGATATTCGGTCTTGTGTCATAATAGTCAGAATATTAGAAACAGAGAGATAGAGAGAGATGAGCAGGGTTGA

mRNA sequence

ATGGCGGTTCTTCCCACCACAAACTGCCACACACCCCATAACCAGAACCCAATCTTCTTCGCCAGCCGCTGCCATCAAAGGCACTGCTCCGCCGCCGGCTTCAGTATTCGATTGAATCGCCGAGCGCTCTGTCGGCCGTTAGTCCTTAGCGAAACGCGTGCCACATCGAATTCGAGCGCGAACAGCGAGCAAGATGGCGAAGTGGACAATCTGGGGGTTAAAGCTGCATTATCCATGCTTAAATTCTACAAACGAGAAATCTCGCCGCTATTGCCAAATAGTTGTCGCTATTTACCTACGTGTAGTGAGTATTCCATGCAAGCTTACAAAAAATATGGTGTTGCGAAGGGCACAATCTTGACTGCTTGGCGTCTCTGCCGCTGCAATCCCCTTGTATTGATTCTAGGCCATTGCTTATTTGTAGGTGGATCTGGGTTTGATCCTCCGCGGTGGTTTGATGAAGAAAGGTTGTCCTGGCTAATTTGTTTGATCGTTGTGCTGTGGGCGGGGGAATCTGTGGGAGCTAATGCCCTATGCAGAAAGAGGGAGAGGGAGGAGGCTCCTCCCTCCCTTTCCGGCGCCGGTGACGGGAGGAGGGAGGCCCTCCTCCCTCACTGCTTCAGATCTATAAGTTTACAAGCGGAAAGGGATGGCTTTGTCTACAAGCGCAAGAGGCGCCGGCTGGACCCGGCAGAAGCCGTTGCAGCTCGTTCGTCGGTGGCTCAGGAGGCGGCGGACCTTCAGGCGGAGGAGAATCGACGGCGAGAGCGCGGGTGGAAGACGTTGTTGAAGGTTAGAGCGAAGTATCAGAGAGAGATTGAGCAGTGGGAGGTTTTGTCGAACAACTTGCGGGCGATGGAGGAGAGGACTCGGAGGCTGCAAGAACTGTACAGACGGGAAGGGGAAGAAGGAACCGCGTCGCTTCTGGGCGCTTCCTTGTTGAACGTGGTTCAGGAGAAGGAGTTGTCCTGCGCATCAATGGTGGAGGAACTTCTCTCTCAGGTAAATCGATATTCGGTCTTGTGTCATAATAGTCAGAATATTAGAAACAGAGAGATAGAGAGAGATGAGCAGGGTTGA

Coding sequence (CDS)

ATGGCGGTTCTTCCCACCACAAACTGCCACACACCCCATAACCAGAACCCAATCTTCTTCGCCAGCCGCTGCCATCAAAGGCACTGCTCCGCCGCCGGCTTCAGTATTCGATTGAATCGCCGAGCGCTCTGTCGGCCGTTAGTCCTTAGCGAAACGCGTGCCACATCGAATTCGAGCGCGAACAGCGAGCAAGATGGCGAAGTGGACAATCTGGGGGTTAAAGCTGCATTATCCATGCTTAAATTCTACAAACGAGAAATCTCGCCGCTATTGCCAAATAGTTGTCGCTATTTACCTACGTGTAGTGAGTATTCCATGCAAGCTTACAAAAAATATGGTGTTGCGAAGGGCACAATCTTGACTGCTTGGCGTCTCTGCCGCTGCAATCCCCTTGTATTGATTCTAGGCCATTGCTTATTTGTAGGTGGATCTGGGTTTGATCCTCCGCGGTGGTTTGATGAAGAAAGGTTGTCCTGGCTAATTTGTTTGATCGTTGTGCTGTGGGCGGGGGAATCTGTGGGAGCTAATGCCCTATGCAGAAAGAGGGAGAGGGAGGAGGCTCCTCCCTCCCTTTCCGGCGCCGGTGACGGGAGGAGGGAGGCCCTCCTCCCTCACTGCTTCAGATCTATAAGTTTACAAGCGGAAAGGGATGGCTTTGTCTACAAGCGCAAGAGGCGCCGGCTGGACCCGGCAGAAGCCGTTGCAGCTCGTTCGTCGGTGGCTCAGGAGGCGGCGGACCTTCAGGCGGAGGAGAATCGACGGCGAGAGCGCGGGTGGAAGACGTTGTTGAAGGTTAGAGCGAAGTATCAGAGAGAGATTGAGCAGTGGGAGGTTTTGTCGAACAACTTGCGGGCGATGGAGGAGAGGACTCGGAGGCTGCAAGAACTGTACAGACGGGAAGGGGAAGAAGGAACCGCGTCGCTTCTGGGCGCTTCCTTGTTGAACGTGGTTCAGGAGAAGGAGTTGTCCTGCGCATCAATGGTGGAGGAACTTCTCTCTCAGGTAAATCGATATTCGGTCTTGTGTCATAATAGTCAGAATATTAGAAACAGAGAGATAGAGAGAGATGAGCAGGGTTGA

Protein sequence

MAVLPTTNCHTPHNQNPIFFASRCHQRHCSAAGFSIRLNRRALCRPLVLSETRATSNSSANSEQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLVLILGHCLFVGGSGFDPPRWFDEERLSWLICLIVVLWAGESVGANALCRKREREEAPPSLSGAGDGRREALLPHCFRSISLQAERDGFVYKRKRRRLDPAEAVAARSSVAQEAADLQAEENRRRERGWKTLLKVRAKYQREIEQWEVLSNNLRAMEERTRRLQELYRREGEEGTASLLGASLLNVVQEKELSCASMVEELLSQVNRYSVLCHNSQNIRNREIERDEQG

Homology

[Close]

BLAST of Lag0012499 vs. NCBI nr
Match: KAA0032659.1 (UPF0161 protein [Cucumis melo var. makuwa] >TYK23539.1 UPF0161 protein [Cucumis melo var. makuwa])

HSP 1 Score: 280.4 bits (716), Expect = 2.2e-71
Identity = 135/157 (85.99%), Postives = 139/157 (88.54%), Query Frame = 0


Query: 1   MAVLPTTNCHTPHNQNPIFFASRCHQRHCSAAGFSIRLNRRALCRPLVLSETRATSNSSA 60
           MAVLPTTNC+TP N NPIFF  RCHQR   AAGFSIR N R L RPL+LSETRATS SSA
Sbjct: 1   MAVLPTTNCNTPQNLNPIFFTGRCHQRPFFAAGFSIRFNCRKLRRPLILSETRATSKSSA 60

Query: 61  NSEQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120
           NS+QDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGT+L
Sbjct: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTVL 120

Query: 121 TAWRLCRCNPLVLILGHCLFVGGSGFDPPRWFDEERL 158
           TAWRLCRCNP    LGHC  VGGSGFDPPRWFDEERL
Sbjct: 121 TAWRLCRCNP----LGHCCLVGGSGFDPPRWFDEERL 153

[Close]

BLAST of Lag0012499 vs. NCBI nr
Match: XP_004142065.1 (UPF0161 protein At3g09310 isoform X1 [Cucumis sativus] >XP_011653638.1 UPF0161 protein At3g09310 isoform X1 [Cucumis sativus])

HSP 1 Score: 275.0 bits (702), Expect = 9.1e-70
Identity = 135/157 (85.99%), Postives = 137/157 (87.26%), Query Frame = 0


Query: 1   MAVLPTTNCHTPHNQNPIFFASRCHQRHCSAAGFSIRLNRRALCRPLVLSETRATSNSSA 60
           MAVLPTTNCHT  N NPIFFA RCHQR CSAAGFSIR N R L R L+LSETRATSNSSA
Sbjct: 1   MAVLPTTNCHTSQNLNPIFFAGRCHQRPCSAAGFSIRFNCRKLRRSLILSETRATSNSSA 60

Query: 61  NSEQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120
           NS+QDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL
Sbjct: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120

Query: 121 TAWRLCRCNPLVLILGHCLFVGGSGFDPPRWFDEERL 158
           TAWRLCRCNPL          GGSGFDPPRWFDEERL
Sbjct: 121 TAWRLCRCNPL----------GGSGFDPPRWFDEERL 147

[Close]

BLAST of Lag0012499 vs. NCBI nr
Match: XP_008448003.1 (PREDICTED: UPF0161 protein At3g09310 [Cucumis melo] >XP_008448011.1 PREDICTED: UPF0161 protein At3g09310 [Cucumis melo])

HSP 1 Score: 267.7 bits (683), Expect = 1.4e-67
Identity = 131/157 (83.44%), Postives = 135/157 (85.99%), Query Frame = 0


Query: 1   MAVLPTTNCHTPHNQNPIFFASRCHQRHCSAAGFSIRLNRRALCRPLVLSETRATSNSSA 60
           MAVLPTTNC+TP N NPIFF  RCHQR   AAGFSIR N R L RPL+LSETRATS SSA
Sbjct: 1   MAVLPTTNCNTPQNLNPIFFTGRCHQRPFFAAGFSIRFNCRKLRRPLILSETRATSKSSA 60

Query: 61  NSEQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120
           NS+QDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGT+L
Sbjct: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTVL 120

Query: 121 TAWRLCRCNPLVLILGHCLFVGGSGFDPPRWFDEERL 158
           TAWRLCRCNPL          GGSGFDPPRWFDEERL
Sbjct: 121 TAWRLCRCNPL----------GGSGFDPPRWFDEERL 147

[Close]

BLAST of Lag0012499 vs. NCBI nr
Match: XP_022931846.1 (UPF0161 protein At3g09310 [Cucurbita moschata])

HSP 1 Score: 261.5 bits (667), Expect = 1.0e-65
Identity = 128/157 (81.53%), Postives = 133/157 (84.71%), Query Frame = 0


Query: 1   MAVLPTTNCHTPHNQNPIFFASRCHQRHCSAAGFSIRLNRRALCRPLVLSETRATSNSSA 60
           MAVLPTTNCH   NQNPIFFA  C + H SAA FSIR N + L RPL++SETRATSNSSA
Sbjct: 1   MAVLPTTNCHKLQNQNPIFFAGGCQKSHRSAAAFSIRFNGQKLRRPLIISETRATSNSSA 60

Query: 61  NSEQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120
           N +QDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL
Sbjct: 61  NGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120

Query: 121 TAWRLCRCNPLVLILGHCLFVGGSGFDPPRWFDEERL 158
           TAWRLCRCNPL          GGSGFDPPRWFDEERL
Sbjct: 121 TAWRLCRCNPL----------GGSGFDPPRWFDEERL 147

[Close]

BLAST of Lag0012499 vs. NCBI nr
Match: XP_038882937.1 (UPF0161 protein At3g09310 isoform X3 [Benincasa hispida])

HSP 1 Score: 261.2 bits (666), Expect = 1.4e-65
Identity = 129/157 (82.17%), Postives = 134/157 (85.35%), Query Frame = 0


Query: 1   MAVLPTTNCHTPHNQNPIFFASRCHQRHCSAAGFSIRLNRRALCRPLVLSETRATSNSSA 60
           MAVL TTNCH   NQNP FFA RCHQR  SAA FSI+ NRR L RPL+LS+TRATSNSS+
Sbjct: 1   MAVLSTTNCHKLQNQNPSFFAGRCHQRPFSAADFSIQYNRRNLRRPLILSKTRATSNSSS 60

Query: 61  NSEQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120
           NS+QDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL
Sbjct: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120

Query: 121 TAWRLCRCNPLVLILGHCLFVGGSGFDPPRWFDEERL 158
           TAWRLCRCNPL          GGSGFDPPRWFDEE L
Sbjct: 121 TAWRLCRCNPL----------GGSGFDPPRWFDEESL 147

[Close]

BLAST of Lag0012499 vs. ExPASy Swiss-Prot
Match: Q9SR32 (UPF0161 protein At3g09310 OS=Arabidopsis thaliana OX=3702 GN=At3g09310 PE=2 SV=2)

HSP 1 Score: 148.3 bits (373), Expect = 1.7e-34
Identity = 71/107 (66.36%), Postives = 81/107 (75.70%), Query Frame = 0


Query: 49  LSETRATSNSSANSEQDG-EVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQ 108
           LS     S     S QDG E++++GVKAAL+ML+FYKREISP+LP SCRY+PTCSEYSM+
Sbjct: 50  LSAKSTPSKPDPASPQDGEELESVGVKAALAMLRFYKREISPVLPRSCRYVPTCSEYSME 109

Query: 109 AYKKYGVAKGTILTAWRLCRCNPLVLILGHCLFVGGSGFDPPRWFDE 155
           AYKKYGV KGT+LT WRLCRCNPL          GGSGFDPPRWF E
Sbjct: 110 AYKKYGVLKGTVLTTWRLCRCNPL----------GGSGFDPPRWFGE 146

[Close]

BLAST of Lag0012499 vs. ExPASy Swiss-Prot
Match: Q2S3T2 (Putative membrane protein insertion efficiency factor OS=Salinibacter ruber (strain DSM 13855 / M31) OX=309807 GN=SRU_1017 PE=3 SV=2)

HSP 1 Score: 86.7 bits (213), Expect = 6.0e-16
Identity = 36/79 (45.57%), Postives = 52/79 (65.82%), Query Frame = 0


Query: 77  LSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLVLILG 136
           + +++ Y+  +SP L  +CR+ PTCS Y++QA+++YG  KG +LT  RL RC+P      
Sbjct: 17  IGLVRLYQLVLSPHLGRTCRFHPTCSAYAIQAFREYGALKGLVLTVHRLLRCHPW----- 76

Query: 137 HCLFVGGSGFDPPRWFDEE 156
                GG G+DPPRWFDEE
Sbjct: 77  -----GGHGYDPPRWFDEE 85

[Close]

BLAST of Lag0012499 vs. ExPASy Swiss-Prot
Match: B0T0Z8 (Putative membrane protein insertion efficiency factor OS=Caulobacter sp. (strain K31) OX=366602 GN=Caul_4526 PE=3 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 3.3e-14
Identity = 37/70 (52.86%), Postives = 44/70 (62.86%), Query Frame = 0


Query: 80  LKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLVLILGHCL 139
           LK YK  +SP +   CRYLPTCSEY+ QA K +G  KG+ L   R+CRCNPL        
Sbjct: 12  LKAYKTTLSPFIGRQCRYLPTCSEYAAQALKDHGPLKGSWLAVGRICRCNPL-------- 71

Query: 140 FVGGSGFDPP 150
             GGSG+DPP
Sbjct: 72  --GGSGYDPP 71

[Close]

BLAST of Lag0012499 vs. ExPASy Swiss-Prot
Match: C0QTH8 (Putative membrane protein insertion efficiency factor OS=Persephonella marina (strain DSM 14350 / EX-H1) OX=123214 GN=PERMA_0195 PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 1.6e-13
Identity = 29/54 (53.70%), Postives = 41/54 (75.93%), Query Frame = 0


Query: 77  LSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNP 131
           + ++K YK+ +SP LPNSCRY PTCS Y++Q+ +KYG  KG++   WR+ RCNP
Sbjct: 6   IKLIKIYKKFVSPALPNSCRYYPTCSSYAIQSIEKYGALKGSLKAVWRILRCNP 59

[Close]

BLAST of Lag0012499 vs. ExPASy Swiss-Prot
Match: Q11SD8 (Putative membrane protein insertion efficiency factor OS=Cytophaga hutchinsonii (strain ATCC 33406 / DSM 1761 / CIP 103989 / NBRC 15051 / NCIMB 9469 / D465) OX=269798 GN=CHU_2420 PE=3 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 3.6e-13
Identity = 36/69 (52.17%), Postives = 43/69 (62.32%), Query Frame = 0


Query: 80  LKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLVLILGHCL 139
           +K Y+  ISPLLP +CRY PTCSEY +QA +KYG  KG  L   R+C CNP         
Sbjct: 19  VKIYQYSISPLLPGACRYTPTCSEYCVQAIEKYGPLKGIWLGTKRICSCNPW-------- 77

Query: 140 FVGGSGFDP 149
             GGSG+DP
Sbjct: 79  --GGSGYDP 77

[Close]

BLAST of Lag0012499 vs. ExPASy TrEMBL
Match: A0A5A7STY4 (UPF0161 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G00430 PE=3 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 1.0e-71
Identity = 135/157 (85.99%), Postives = 139/157 (88.54%), Query Frame = 0


Query: 1   MAVLPTTNCHTPHNQNPIFFASRCHQRHCSAAGFSIRLNRRALCRPLVLSETRATSNSSA 60
           MAVLPTTNC+TP N NPIFF  RCHQR   AAGFSIR N R L RPL+LSETRATS SSA
Sbjct: 1   MAVLPTTNCNTPQNLNPIFFTGRCHQRPFFAAGFSIRFNCRKLRRPLILSETRATSKSSA 60

Query: 61  NSEQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120
           NS+QDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGT+L
Sbjct: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTVL 120

Query: 121 TAWRLCRCNPLVLILGHCLFVGGSGFDPPRWFDEERL 158
           TAWRLCRCNP    LGHC  VGGSGFDPPRWFDEERL
Sbjct: 121 TAWRLCRCNP----LGHCCLVGGSGFDPPRWFDEERL 153

[Close]

BLAST of Lag0012499 vs. ExPASy TrEMBL
Match: A0A0A0KXI4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G296120 PE=3 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 4.4e-70
Identity = 135/157 (85.99%), Postives = 137/157 (87.26%), Query Frame = 0


Query: 1   MAVLPTTNCHTPHNQNPIFFASRCHQRHCSAAGFSIRLNRRALCRPLVLSETRATSNSSA 60
           MAVLPTTNCHT  N NPIFFA RCHQR CSAAGFSIR N R L R L+LSETRATSNSSA
Sbjct: 1   MAVLPTTNCHTSQNLNPIFFAGRCHQRPCSAAGFSIRFNCRKLRRSLILSETRATSNSSA 60

Query: 61  NSEQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120
           NS+QDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL
Sbjct: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120

Query: 121 TAWRLCRCNPLVLILGHCLFVGGSGFDPPRWFDEERL 158
           TAWRLCRCNPL          GGSGFDPPRWFDEERL
Sbjct: 121 TAWRLCRCNPL----------GGSGFDPPRWFDEERL 147

[Close]

BLAST of Lag0012499 vs. ExPASy TrEMBL
Match: A0A1S3BJN3 (UPF0161 protein At3g09310 OS=Cucumis melo OX=3656 GN=LOC103490314 PE=3 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 7.0e-68
Identity = 131/157 (83.44%), Postives = 135/157 (85.99%), Query Frame = 0


Query: 1   MAVLPTTNCHTPHNQNPIFFASRCHQRHCSAAGFSIRLNRRALCRPLVLSETRATSNSSA 60
           MAVLPTTNC+TP N NPIFF  RCHQR   AAGFSIR N R L RPL+LSETRATS SSA
Sbjct: 1   MAVLPTTNCNTPQNLNPIFFTGRCHQRPFFAAGFSIRFNCRKLRRPLILSETRATSKSSA 60

Query: 61  NSEQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120
           NS+QDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGT+L
Sbjct: 61  NSDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTVL 120

Query: 121 TAWRLCRCNPLVLILGHCLFVGGSGFDPPRWFDEERL 158
           TAWRLCRCNPL          GGSGFDPPRWFDEERL
Sbjct: 121 TAWRLCRCNPL----------GGSGFDPPRWFDEERL 147

[Close]

BLAST of Lag0012499 vs. ExPASy TrEMBL
Match: A0A6J1EUS1 (UPF0161 protein At3g09310 OS=Cucurbita moschata OX=3662 GN=LOC111438132 PE=3 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 5.0e-66
Identity = 128/157 (81.53%), Postives = 133/157 (84.71%), Query Frame = 0


Query: 1   MAVLPTTNCHTPHNQNPIFFASRCHQRHCSAAGFSIRLNRRALCRPLVLSETRATSNSSA 60
           MAVLPTTNCH   NQNPIFFA  C + H SAA FSIR N + L RPL++SETRATSNSSA
Sbjct: 1   MAVLPTTNCHKLQNQNPIFFAGGCQKSHRSAAAFSIRFNGQKLRRPLIISETRATSNSSA 60

Query: 61  NSEQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120
           N +QDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL
Sbjct: 61  NGDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120

Query: 121 TAWRLCRCNPLVLILGHCLFVGGSGFDPPRWFDEERL 158
           TAWRLCRCNPL          GGSGFDPPRWFDEERL
Sbjct: 121 TAWRLCRCNPL----------GGSGFDPPRWFDEERL 147

[Close]

BLAST of Lag0012499 vs. ExPASy TrEMBL
Match: A0A6J1HNH0 (UPF0161 protein At3g09310 OS=Cucurbita maxima OX=3661 GN=LOC111465896 PE=3 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 3.1e-63
Identity = 126/157 (80.25%), Postives = 131/157 (83.44%), Query Frame = 0


Query: 1   MAVLPTTNCHTPHNQNPIFFASRCHQRHCSAAGFSIRLNRRALCRPLVLSETRATSNSSA 60
           MAVLPTTNCH    Q PIFFA  C Q H SAA FSIR N + L RPL++SETRATSNSSA
Sbjct: 1   MAVLPTTNCH--KLQKPIFFAGGCQQTHRSAAAFSIRFNGQKLRRPLIISETRATSNSSA 60

Query: 61  NSEQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQAYKKYGVAKGTIL 120
           N +QDGEVDNLGVKAALSMLKFYKREISPLLPNSCRY+PTCSEYSMQAYKKYGVAKGTIL
Sbjct: 61  NEDQDGEVDNLGVKAALSMLKFYKREISPLLPNSCRYVPTCSEYSMQAYKKYGVAKGTIL 120

Query: 121 TAWRLCRCNPLVLILGHCLFVGGSGFDPPRWFDEERL 158
           TAWRLCRCNPL          GGSGFDPPRWFDEERL
Sbjct: 121 TAWRLCRCNPL----------GGSGFDPPRWFDEERL 145

[Close]

BLAST of Lag0012499 vs. TAIR 10
Match: AT3G09310.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF37 (InterPro:IPR002696); Has 5781 Blast hits to 5781 proteins in 1903 species: Archae - 0; Bacteria - 3956; Metazoa - 2; Fungi - 0; Plants - 42; Viruses - 3; Other Eukaryotes - 1778 (source: NCBI BLink). )

HSP 1 Score: 148.3 bits (373), Expect = 1.2e-35
Identity = 71/107 (66.36%), Postives = 81/107 (75.70%), Query Frame = 0


Query: 49  LSETRATSNSSANSEQDG-EVDNLGVKAALSMLKFYKREISPLLPNSCRYLPTCSEYSMQ 108
           LS     S     S QDG E++++GVKAAL+ML+FYKREISP+LP SCRY+PTCSEYSM+
Sbjct: 50  LSAKSTPSKPDPASPQDGEELESVGVKAALAMLRFYKREISPVLPRSCRYVPTCSEYSME 109

Query: 109 AYKKYGVAKGTILTAWRLCRCNPLVLILGHCLFVGGSGFDPPRWFDE 155
           AYKKYGV KGT+LT WRLCRCNPL          GGSGFDPPRWF E
Sbjct: 110 AYKKYGVLKGTVLTTWRLCRCNPL----------GGSGFDPPRWFGE 146

[Close]

BLAST of Lag0012499 vs. TAIR 10
Match: AT3G27520.1 (unknown protein; Has 28 Blast hits to 28 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 62.4 bits (150), Expect = 8.6e-10
Identity = 58/161 (36.02%), Postives = 78/161 (48.45%), Query Frame = 0


Query: 215 ERDGFVYKRKRR-RLDPAEAVAARSSVAQEAADLQAEENRRRERGWKTLLKVRAKYQREI 274
           E DGFVY RK+R R   AE     S       D   EE  RR R  + L+K++ KYQ EI
Sbjct: 20  EDDGFVYNRKKRTRFADAEET---SKPPDPELDRVVEERNRRIRKKRLLVKLKRKYQSEI 79

Query: 275 EQWEVLSNNLRAMEERTRRLQELYRRE--GEEGTASLLGASLLNVVQEKEL-------SC 334
           +QWE+LSN+  AM+E+  R Q   R E      T S  G S       +E        S 
Sbjct: 80  DQWEILSNSFNAMQEKADRFQTAQREERLNANETMSFPGNSSSTTEGGREFGGEDASKSP 139

Query: 335 ASMVEELL-------SQVNRYSVLCHNSQNIRNREIERDEQ 359
           +SM+++LL       + +N  S LC  ++NI   E E  +Q
Sbjct: 140 SSMLDQLLFTVERQEAVINEVSKLCEVTENICRVEEEETKQ 177

The following BLAST results are available for this feature:

BLAST of Lag0012499 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0032659.1	2.2e-71	85.99	UPF0161 protein [Cucumis melo var. makuwa] >TYK23539.1 UPF0161 protein [Cucumis ...	[more]
XP_004142065.1	9.1e-70	85.99	UPF0161 protein At3g09310 isoform X1 [Cucumis sativus] >XP_011653638.1 UPF0161 p...	[more]
XP_008448003.1	1.4e-67	83.44	PREDICTED: UPF0161 protein At3g09310 [Cucumis melo] >XP_008448011.1 PREDICTED: U...	[more]
XP_022931846.1	1.0e-65	81.53	UPF0161 protein At3g09310 [Cucurbita moschata]	[more]
XP_038882937.1	1.4e-65	82.17	UPF0161 protein At3g09310 isoform X3 [Benincasa hispida]	[more]

BLAST of Lag0012499 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SR32	1.7e-34	66.36	UPF0161 protein At3g09310 OS=Arabidopsis thaliana OX=3702 GN=At3g09310 PE=2 SV=2	[more]
Q2S3T2	6.0e-16	45.57	Putative membrane protein insertion efficiency factor OS=Salinibacter ruber (str...	[more]
B0T0Z8	3.3e-14	52.86	Putative membrane protein insertion efficiency factor OS=Caulobacter sp. (strain...	[more]
C0QTH8	1.6e-13	53.70	Putative membrane protein insertion efficiency factor OS=Persephonella marina (s...	[more]
Q11SD8	3.6e-13	52.17	Putative membrane protein insertion efficiency factor OS=Cytophaga hutchinsonii ...	[more]

BLAST of Lag0012499 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7STY4	1.0e-71	85.99	UPF0161 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G0043...	[more]
A0A0A0KXI4	4.4e-70	85.99	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G296120 PE=3 SV=1	[more]
A0A1S3BJN3	7.0e-68	83.44	UPF0161 protein At3g09310 OS=Cucumis melo OX=3656 GN=LOC103490314 PE=3 SV=1	[more]
A0A6J1EUS1	5.0e-66	81.53	UPF0161 protein At3g09310 OS=Cucurbita moschata OX=3662 GN=LOC111438132 PE=3 SV=...	[more]
A0A6J1HNH0	3.1e-63	80.25	UPF0161 protein At3g09310 OS=Cucurbita maxima OX=3661 GN=LOC111465896 PE=3 SV=1	[more]

BLAST of Lag0012499 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G09310.1	1.2e-35	66.36	unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF37 (...	[more]
AT3G27520.1	8.6e-10	36.02	unknown protein; Has 28 Blast hits to 28 proteins in 10 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 266..303
IPR002696	Putative membrane protein insertion efficiency factor	SMART	SM01234	Haemolytic_2	coord: 72..149 e-value: 2.0E-29 score: 113.7
IPR002696	Putative membrane protein insertion efficiency factor	TIGRFAM	TIGR00278	TIGR00278	coord: 78..132 e-value: 9.4E-18 score: 61.9
IPR002696	Putative membrane protein insertion efficiency factor	PFAM	PF01809	YidD	coord: 75..131 e-value: 2.2E-22 score: 78.7
IPR002696	Putative membrane protein insertion efficiency factor	PANTHER	PTHR33383	MEMBRANE PROTEIN INSERTION EFFICIENCY FACTOR-RELATED	coord: 28..156
IPR002696	Putative membrane protein insertion efficiency factor	HAMAP	MF_00386	UPF0161_YidD	coord: 72..140 score: 17.509243

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0012499.1	Lag0012499.1	mRNA