
Lag0012388 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGAAATTAAGCTCAAGCAGAAGAGTGAGTTTCAGCTCAGATCAGCCGACAGCTCTCCAAAGAAACAAGAAAAGGGTGATCACTGTATTCTGGGTTTTCCGGCTGCCGAAACCCGGAAGGTTCTCGCCGGAAAGTTTCCTCCGCCGCCTCGGCGTCAAAGTCGCCAAAGTTCTCCGATATGTCTCTTTCAGAAAGAGATCTTCGTCTTCGTGTTCGAAGAATAATAAGAACGCAGTCGTGTCTGGTTCTAATTTCAACAGATCCCATTCGGTTTCGGATTCCATGGAAGAATCTCACAGAGCTGAAGCTGTTAAAGATTGCATCCAGTTCTTCAACTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAGCTGTTTGA ATGTCGAAATTAAGCTCAAGCAGAAGAGTGAGTTTCAGCTCAGATCAGCCGACAGCTCTCCAAAGAAACAAGAAAAGGGTGATCACTGTATTCTGGGTTTTCCGGCTGCCGAAACCCGGAAGGTTCTCGCCGGAAAGTTTCCTCCGCCGCCTCGGCGTCAAAGTCGCCAAAGTTCTCCGATATGTCTCTTTCAGAAAGAGATCTTCGTCTTCGTGTTCGAAGAATAATAAGAACGCAGTCGTGTCTGGTTCTAATTTCAACAGATCCCATTCGGTTTCGGATTCCATGGAAGAATCTCACAGAGCTGAAGCTGTTAAAGATTGCATCCAGTTCTTCAACTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAGCTGTTTGA ATGTCGAAATTAAGCTCAAGCAGAAGAGTGAGTTTCAGCTCAGATCAGCCGACAGCTCTCCAAAGAAACAAGAAAAGGGTGATCACTGTATTCTGGGTTTTCCGGCTGCCGAAACCCGGAAGGTTCTCGCCGGAAAGTTTCCTCCGCCGCCTCGGCGTCAAAGTCGCCAAAGTTCTCCGATATGTCTCTTTCAGAAAGAGATCTTCGTCTTCGTGTTCGAAGAATAATAAGAACGCAGTCGTGTCTGGTTCTAATTTCAACAGATCCCATTCGGTTTCGGATTCCATGGAAGAATCTCACAGAGCTGAAGCTGTTAAAGATTGCATCCAGTTCTTCAACTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAGCTGTTTGA MSKLSSSRRVSFSSDQPTALQRNKKRVITVFWVFRLPKPGRFSPESFLRRLGVKVAKVLRYVSFRKRSSSSCSKNNKNAVVSGSNFNRSHSVSDSMEESHRAEAVKDCIQFFNSSSSSSSSSSAV Homology
BLAST of Lag0012388 vs. NCBI nr
Match: XP_022977351.1 (uncharacterized protein LOC111477703 [Cucurbita maxima]) HSP 1 Score: 158.3 bits (399), Expect = 4.3e-35 Identity = 88/125 (70.40%), Postives = 101/125 (80.80%), Query Frame = 0
BLAST of Lag0012388 vs. NCBI nr
Match: KAG6603596.1 (hypothetical protein SDJN03_04205, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 157.1 bits (396), Expect = 9.6e-35 Identity = 92/130 (70.77%), Postives = 104/130 (80.00%), Query Frame = 0
BLAST of Lag0012388 vs. NCBI nr
Match: XP_022950374.1 (josephin-like protein [Cucurbita moschata]) HSP 1 Score: 156.0 bits (393), Expect = 2.1e-34 Identity = 90/128 (70.31%), Postives = 100/128 (78.12%), Query Frame = 0
BLAST of Lag0012388 vs. NCBI nr
Match: XP_023518083.1 (uncharacterized protein LOC111781626 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 153.7 bits (387), Expect = 1.1e-33 Identity = 90/123 (73.17%), Postives = 98/123 (79.67%), Query Frame = 0
BLAST of Lag0012388 vs. NCBI nr
Match: KAG6595400.1 (hypothetical protein SDJN03_11953, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027410.1 hypothetical protein SDJN02_11422, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 152.9 bits (385), Expect = 1.8e-33 Identity = 91/124 (73.39%), Postives = 99/124 (79.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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