Lag0012380 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0012380
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Chlorophyll a-b binding protein, chloroplastic
Location	chr1: 40570178 .. 40572409 (-)
RNA-Seq Expression	Lag0012380
Synteny	Lag0012380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATTCGTCTCACAATCCAACGGACACAAAACCACCACCACAGATTATGTGGCAATCGCCGATCACAATTCCCCTTTCTGAGCCACATAATAACCCAACCAAAATCCCCAATTCCATCACACACTCACCCTTTCCCCCCCTCTCAACTCGCCGCGAAATTCTCGCCGTCGTAATGGCCGCCACCGCCACCGCCGCCGCAACCTCCTCCTTCATCGGAACGCGCCTCGCCGACGTTCGGCCGAGTTCCGGGCGAGTCCAAGCCCGATTCTCATTCGGCAAAAAGAAGAGCCCGGCGAAGAAATCGCCGTCGTCGAAGCAGATATCAGACCGGCCGCTGTGGTTCCCCGGAGCGAAGGCGCCGGAATGGCTGGACGGAAGCCTGGTGGGCGACTACGGGTTCGATCCGTTCGGGTTGGGGAAACCGGCGGAGTATTTGCAGTACGATCTGGACTCGTTGGACCAGAACTTGGCGAAGAATGTGGCCGGAGATATAATCGGAACGAGATTCGAGAGCTCGGAAGTGAAATCGACGCCGTTTCAGCCGTACACGGAGGTTTTTGGATTGCAGAGATTCCGTGAGTGCGAGCTCATCCATGGAAGGTGGGCCATGTTGGCCACACTCGGTGCTCTCTCTGTTGAGTGGCTCACTGGCGTCACTTGGCAAGACGCCGGAAAGGTGAGTTTTTTTTATTATTTATTTTTCTTTTCATCCATTTTTAGTTTCTATATTGTGATTTTCGTAAATTACATCTTGCATTATTATATTAATTTAGCATTTTATATATGAGGATGGTATGAAATAAATAGATAAATAGTTTTTCTTTTCTATAGTTCAACAAAATTAAAGGAAAAAAAAAGGATTTTGGTACCGATGATCAAGAGATGTATAGCATTATTATATTAATTTAACATAGTTCAACTGATATAATGTTAATCTTTCAGTTCTACGTCGTGTTAAAAATAAAAAATAAAAATAAAAACAAAATGTATATTATTCACAAATAGTTAAAATATTGGTGGAATGTTTCTTTTTCCAATTAGTCTATATTATTTAGAAAAGTTTTTACTCACCTCCTCATCTACTTTCAATTGTACTATTTCCACCCTGGGTGAAGGTCAGTAAATTAATAAAATTTTAGACTAGGAATTGGAATTAGTCTCTCTTTAATTATGTTTATATATATATATATTTATTGAAATTTAAACATATGCAATTTTTAGATTTCTTTGAGTATGCATGTATCATAATAATTTAGGTACTGTTAATATATTTTGGTTAAGTTATCAAAAATACCCTTGAACTATGAAATTAGTTTCAATTATACCTCTAAACTTTCAAACTTAGAGAGCTAAAATAAAACTTTTAAAAGTTTATGGATATGACTAAAACCAACCCCATAGTTTAAGGGTATTTTTTATAATTTAACCATGTATTTATTAATTTGTATATATGTATTGTATTTAAAATTATTTTCTCTTTATTTATTTTAAGGACATTTTTTTAATAAAATATTATGTTTCTTGATTTATATTATTGGATAAACACAATTTTATTATTGGTTGTCTAAGAATTTCAATGAAGTGGTAAGTTATCATGACATTTTGAATGGGTATATTTTCTACAACATGTTAAATACATGGACTTTCAATTTTGCAGATCAGCTTGTATAACCAATAAAAATTAAAATCTGAGTAATTTAAACTCAATTAACAATATTTCAGTTTTATTTTTTCAAAAAAAAAAAAAAAACAATATTTCAATTTTAAAAGAAAAAATGAAGAGGAAAAACAATGAATCTTAACTTCTTCCATTATTCATCCAAAGAATTATCATTGATGAACCAAAATTGTGAAAACAAAAATGCAGGTAGAATTAGTGGAAGGTTCATCCTACCTTGGGCAGCCCCTTCCTTTCTCCATCACCACATTGATCTGGATCGAAGTTCTCGTGATCGGATACATCGAGTTTCAAAGGAACTCCGAGCTCGACCCCGAGAAGAGATTGTATCCCGGAGGCAAGTATTTTGACCCCTTAGGCTTGGCCGAGGATCCCGAAAAGAAAGCCATCCTACAATTGGCCGAGATCAAGCATGCTCGCCTTGCCATGGTTGCCTTCCTTGGCTTCGCTGTTCAAGCTGCTGTCACTGGCAAAGGCCCGCTCAACAATTGGGCAACCCATCTGAGTGACCCACTCCACACCACCATTATTGACACGTTCTCCTCTTCTTAA

mRNA sequence

ATGGATTCGTCTCACAATCCAACGGACACAAAACCACCACCACAGATTATGTGGCAATCGCCGATCACAATTCCCCTTTCTGAGCCACATAATAACCCAACCAAAATCCCCAATTCCATCACACACTCACCCTTTCCCCCCCTCTCAACTCGCCGCGAAATTCTCGCCGTCGTAATGGCCGCCACCGCCACCGCCGCCGCAACCTCCTCCTTCATCGGAACGCGCCTCGCCGACGTTCGGCCGAGTTCCGGGCGAGTCCAAGCCCGATTCTCATTCGGCAAAAAGAAGAGCCCGGCGAAGAAATCGCCGTCGTCGAAGCAGATATCAGACCGGCCGCTGTGGTTCCCCGGAGCGAAGGCGCCGGAATGGCTGGACGGAAGCCTGGTGGGCGACTACGGGTTCGATCCGTTCGGGTTGGGGAAACCGGCGGAGTATTTGCAGTACGATCTGGACTCGTTGGACCAGAACTTGGCGAAGAATGTGGCCGGAGATATAATCGGAACGAGATTCGAGAGCTCGGAAGTGAAATCGACGCCGTTTCAGCCGTACACGGAGGTTTTTGGATTGCAGAGATTCCGTGAGTGCGAGCTCATCCATGGAAGGTGGGCCATGTTGGCCACACTCGGTGCTCTCTCTGTTGAGTGGCTCACTGGCGTCACTTGGCAAGACGCCGGAAAGGTAGAATTAGTGGAAGGTTCATCCTACCTTGGGCAGCCCCTTCCTTTCTCCATCACCACATTGATCTGGATCGAAGTTCTCGTGATCGGATACATCGAGTTTCAAAGGAACTCCGAGCTCGACCCCGAGAAGAGATTGTATCCCGGAGGCAAGTATTTTGACCCCTTAGGCTTGGCCGAGGATCCCGAAAAGAAAGCCATCCTACAATTGGCCGAGATCAAGCATGCTCGCCTTGCCATGGTTGCCTTCCTTGGCTTCGCTGTTCAAGCTGCTGTCACTGGCAAAGGCCCGCTCAACAATTGGGCAACCCATCTGAGTGACCCACTCCACACCACCATTATTGACACGTTCTCCTCTTCTTAA

Coding sequence (CDS)

ATGGATTCGTCTCACAATCCAACGGACACAAAACCACCACCACAGATTATGTGGCAATCGCCGATCACAATTCCCCTTTCTGAGCCACATAATAACCCAACCAAAATCCCCAATTCCATCACACACTCACCCTTTCCCCCCCTCTCAACTCGCCGCGAAATTCTCGCCGTCGTAATGGCCGCCACCGCCACCGCCGCCGCAACCTCCTCCTTCATCGGAACGCGCCTCGCCGACGTTCGGCCGAGTTCCGGGCGAGTCCAAGCCCGATTCTCATTCGGCAAAAAGAAGAGCCCGGCGAAGAAATCGCCGTCGTCGAAGCAGATATCAGACCGGCCGCTGTGGTTCCCCGGAGCGAAGGCGCCGGAATGGCTGGACGGAAGCCTGGTGGGCGACTACGGGTTCGATCCGTTCGGGTTGGGGAAACCGGCGGAGTATTTGCAGTACGATCTGGACTCGTTGGACCAGAACTTGGCGAAGAATGTGGCCGGAGATATAATCGGAACGAGATTCGAGAGCTCGGAAGTGAAATCGACGCCGTTTCAGCCGTACACGGAGGTTTTTGGATTGCAGAGATTCCGTGAGTGCGAGCTCATCCATGGAAGGTGGGCCATGTTGGCCACACTCGGTGCTCTCTCTGTTGAGTGGCTCACTGGCGTCACTTGGCAAGACGCCGGAAAGGTAGAATTAGTGGAAGGTTCATCCTACCTTGGGCAGCCCCTTCCTTTCTCCATCACCACATTGATCTGGATCGAAGTTCTCGTGATCGGATACATCGAGTTTCAAAGGAACTCCGAGCTCGACCCCGAGAAGAGATTGTATCCCGGAGGCAAGTATTTTGACCCCTTAGGCTTGGCCGAGGATCCCGAAAAGAAAGCCATCCTACAATTGGCCGAGATCAAGCATGCTCGCCTTGCCATGGTTGCCTTCCTTGGCTTCGCTGTTCAAGCTGCTGTCACTGGCAAAGGCCCGCTCAACAATTGGGCAACCCATCTGAGTGACCCACTCCACACCACCATTATTGACACGTTCTCCTCTTCTTAA

Protein sequence

MDSSHNPTDTKPPPQIMWQSPITIPLSEPHNNPTKIPNSITHSPFPPLSTRREILAVVMAATATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESSEVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFSSS

Homology

[Close]

BLAST of Lag0012380 vs. NCBI nr
Match: XP_022966541.1 (chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucurbita maxima] >XP_023517083.1 chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucurbita pepo subsp. pepo] >KAG7027389.1 Chlorophyll a-b binding protein CP29.2, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 556.2 bits (1432), Expect = 2.0e-154
Identity = 271/284 (95.42%), Postives = 280/284 (98.59%), Query Frame = 0


Query: 63  ATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPGAKAPE 122
           AT+AATSSFIGTRLADVR SSGRVQARFSFGKKKSPAKKSPSSKQI DRPLWFPGAKAPE
Sbjct: 3   ATSAATSSFIGTRLADVRSSSGRVQARFSFGKKKSPAKKSPSSKQIPDRPLWFPGAKAPE 62

Query: 123 WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESSEVKSTPFQP 182
           WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGD+IGTRFE+SEVKSTPFQP
Sbjct: 63  WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDLIGTRFENSEVKSTPFQP 122

Query: 183 YTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPF 242
           YTEVFGLQRFRECELIHGRWAMLATLGAL+VEWLTGVTWQDAGKVELVEGSSYLGQPLPF
Sbjct: 123 YTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPF 182

Query: 243 SITTLIWIEVLVIGYIEFQRNSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHA 302
           S+T LIWIEVLVIGYIEFQRN+EL+PEKRLYPGGK+FDPLGLAEDPEKKA+LQLAEIKHA
Sbjct: 183 SLTALIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHA 242

Query: 303 RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFSSS 347
           RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIID FSSS
Sbjct: 243 RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSSS 286

[Close]

BLAST of Lag0012380 vs. NCBI nr
Match: XP_022151483.1 (chlorophyll a-b binding protein CP29.1, chloroplastic [Momordica charantia])

HSP 1 Score: 555.1 bits (1429), Expect = 4.4e-154
Identity = 275/287 (95.82%), Postives = 282/287 (98.26%), Query Frame = 0


Query: 60  AATATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPGAK 119
           AATATAAATSSFIGTRL DVRPSSGRVQARFSFGKKK+  KK  SSKQISDRPLWFPGAK
Sbjct: 3   AATATAAATSSFIGTRLPDVRPSSGRVQARFSFGKKKTAPKK--SSKQISDRPLWFPGAK 62

Query: 120 APEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESSEVKSTP 179
           APEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFE+S+VKSTP
Sbjct: 63  APEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFENSDVKSTP 122

Query: 180 FQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQP 239
           FQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQP
Sbjct: 123 FQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQP 182

Query: 240 LPFSITTLIWIEVLVIGYIEFQRNSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEI 299
           LPFSITTLIWIEVLVIGYIEFQRN+ELDPEKRLYPGGK+FDPLGLAEDPEKKA+LQLAEI
Sbjct: 183 LPFSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEI 242

Query: 300 KHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFSSS 347
           KHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIID+FSSS
Sbjct: 243 KHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDSFSSS 287

[Close]

BLAST of Lag0012380 vs. NCBI nr
Match: XP_004147887.1 (chlorophyll a-b binding protein CP29.1, chloroplastic [Cucumis sativus] >KGN54365.1 hypothetical protein Csa_017948 [Cucumis sativus])

HSP 1 Score: 555.1 bits (1429), Expect = 4.4e-154
Identity = 271/283 (95.76%), Postives = 278/283 (98.23%), Query Frame = 0


Query: 63  ATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPGAKAPE 122
           ATAAATSSF+GTRLA++ PSSGRVQARF FGKKKSP KKSPSSK ISDRPLWFPGAKAPE
Sbjct: 2   ATAAATSSFLGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAPE 61

Query: 123 WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESSEVKSTPFQP 182
           WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFES+EVKSTPFQP
Sbjct: 62  WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQP 121

Query: 183 YTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPF 242
           YTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPF
Sbjct: 122 YTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPF 181

Query: 243 SITTLIWIEVLVIGYIEFQRNSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHA 302
           SITTLIWIEVLVIGYIEFQRN+ELDPEKRLYPGGK+FDPLGLAEDPEKKA+LQLAEIKHA
Sbjct: 182 SITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHA 241

Query: 303 RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFSS 346
           RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIID FSS
Sbjct: 242 RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 284

[Close]

BLAST of Lag0012380 vs. NCBI nr
Match: XP_008449241.1 (PREDICTED: chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucumis melo] >KAA0045037.1 chlorophyll a-b binding protein CP29.1 [Cucumis melo var. makuwa] >TYJ96289.1 chlorophyll a-b binding protein CP29.1 [Cucumis melo var. makuwa])

HSP 1 Score: 555.1 bits (1429), Expect = 4.4e-154
Identity = 271/283 (95.76%), Postives = 278/283 (98.23%), Query Frame = 0


Query: 63  ATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPGAKAPE 122
           ATAAATSSFIGTRLA++ PSSGRVQARF FGKKKSP KKSPSSK ISDRPLWFPGAKAPE
Sbjct: 2   ATAAATSSFIGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKGISDRPLWFPGAKAPE 61

Query: 123 WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESSEVKSTPFQP 182
           WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFES+EVKSTPFQP
Sbjct: 62  WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQP 121

Query: 183 YTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPF 242
           YTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPF
Sbjct: 122 YTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPF 181

Query: 243 SITTLIWIEVLVIGYIEFQRNSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHA 302
           S+TTLIWIEVLVIGYIEFQRN+ELDPEKRLYPGGK+FDPLGLAEDPEKKA+LQLAEIKHA
Sbjct: 182 SLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHA 241

Query: 303 RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFSS 346
           RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIID FSS
Sbjct: 242 RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 284

[Close]

BLAST of Lag0012380 vs. NCBI nr
Match: XP_038882769.1 (chlorophyll a-b binding protein CP29.1, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 555.1 bits (1429), Expect = 4.4e-154
Identity = 271/283 (95.76%), Postives = 277/283 (97.88%), Query Frame = 0


Query: 63  ATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPGAKAPE 122
           ATAAATSSFIGTRLA++RP SGRVQARF FGKKKSP KKSPSSK ISDRPLWFPGAKAPE
Sbjct: 2   ATAAATSSFIGTRLAELRPCSGRVQARFGFGKKKSPPKKSPSSKTISDRPLWFPGAKAPE 61

Query: 123 WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESSEVKSTPFQP 182
           WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFES+EVKSTPFQP
Sbjct: 62  WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQP 121

Query: 183 YTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPF 242
           YTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPF
Sbjct: 122 YTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPF 181

Query: 243 SITTLIWIEVLVIGYIEFQRNSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHA 302
           SITTLIWIEVLVIGYIEFQRN+ELDPEKRLYPGGK+FDPLGLAEDPEKK +LQLAEIKHA
Sbjct: 182 SITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKVVLQLAEIKHA 241

Query: 303 RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFSS 346
           RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIID FSS
Sbjct: 242 RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 284

[Close]

BLAST of Lag0012380 vs. ExPASy Swiss-Prot
Match: Q07473 (Chlorophyll a-b binding protein CP29.1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCB4.1 PE=1 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 3.9e-137
Identity = 241/290 (83.10%), Postives = 262/290 (90.34%), Query Frame = 0


Query: 59  MAAT-ATAAATSSFIGTRLA-DVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFP 118
           MAAT A AAA SS +GTR+A  + P SGR  A F FGKKK+  KKS      +DRPLW+P
Sbjct: 1   MAATSAAAAAASSIMGTRVAPGIHPGSGRFTAVFGFGKKKAAPKKSAKKTVTTDRPLWYP 60

Query: 119 GAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESSEVK 178
           GA +P+WLDGSLVGDYGFDPFGLGKPAEYLQ+D+DSLDQNLAKN+AGD+IGTR E+++ K
Sbjct: 61  GAISPDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVIGTRTEAADAK 120

Query: 179 STPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYL 238
           STPFQPY+EVFG+QRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELV+GSSYL
Sbjct: 121 STPFQPYSEVFGIQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVDGSSYL 180

Query: 239 GQPLPFSITTLIWIEVLVIGYIEFQRNSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQL 298
           GQPLPFSI+TLIWIEVLVIGYIEFQRN+ELD EKRLYPGGK+FDPLGLA DPEK A LQL
Sbjct: 181 GQPLPFSISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQL 240

Query: 299 AEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFSSS 347
           AEIKHARLAMVAFLGFAVQAA TGKGPLNNWATHLSDPLHTTIIDTFSSS
Sbjct: 241 AEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS 290

[Close]

BLAST of Lag0012380 vs. ExPASy Swiss-Prot
Match: Q9XF88 (Chlorophyll a-b binding protein CP29.2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCB4.2 PE=1 SV=1)

HSP 1 Score: 483.8 bits (1244), Expect = 1.6e-135
Identity = 239/289 (82.70%), Postives = 263/289 (91.00%), Query Frame = 0


Query: 59  MAATATAAATSSFIGTR-LADVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPG 118
           MAAT+TAAA SS +GTR ++D+  +S R  ARF FG KK+  KK+ +   ISDRPLWFPG
Sbjct: 1   MAATSTAAAASSIMGTRVVSDISSNSSRFTARFGFGTKKASPKKAKT--VISDRPLWFPG 60

Query: 119 AKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESSEVKS 178
           AK+PE+LDGSLVGDYGFDPFGLGKPAEYLQ+DLDSLDQNLAKN+ G++IGTR E+ + KS
Sbjct: 61  AKSPEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKS 120

Query: 179 TPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLG 238
           TPFQPY+EVFGLQRFRECELIHGRWAMLATLGA++VEWLTGVTWQDAGKVELV+GSSYLG
Sbjct: 121 TPFQPYSEVFGLQRFRECELIHGRWAMLATLGAITVEWLTGVTWQDAGKVELVDGSSYLG 180

Query: 239 QPLPFSITTLIWIEVLVIGYIEFQRNSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLA 298
           QPLPFSI+TLIWIEVLVIGYIEFQRN+ELD EKRLYPGGK+FDPLGLA DP KKA LQLA
Sbjct: 181 QPLPFSISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLA 240

Query: 299 EIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFSSS 347
           EIKHARLAMV FLGFAVQAA TGKGPLNNWATHLSDPLHTTIIDTFSSS
Sbjct: 241 EIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS 287

[Close]

BLAST of Lag0012380 vs. ExPASy Swiss-Prot
Match: Q9S7W1 (Chlorophyll a-b binding protein CP29.3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCB4.3 PE=2 SV=1)

HSP 1 Score: 417.9 bits (1073), Expect = 1.1e-115
Identity = 211/273 (77.29%), Postives = 230/273 (84.25%), Query Frame = 0


Query: 61  ATATAAATSSFIGTRLADVRPSSGRVQAR--FSFGKKK--SPAKKSPSSKQISDRPLWFP 120
           AT TAAA S   G R+ D RP +GRVQAR  FSFGKKK   P KKS   +   DR +WFP
Sbjct: 2   ATTTAAAASGIFGIRIQDPRPGTGRVQARFGFSFGKKKPAPPPKKSRQVQDDGDRLVWFP 61

Query: 121 GAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESSEVK 180
           GA  PEWLDGS++GD GFDPFGLGKPAEYLQYD D LDQNLAKNVAGDIIG   ESSE+K
Sbjct: 62  GANPPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESSEIK 121

Query: 181 STPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYL 240
            TPFQPYTEVFG+QRFRECELIHGRWAML TLGA++VE LTG+ WQDAGKVELVEGSSYL
Sbjct: 122 PTPFQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEALTGIAWQDAGKVELVEGSSYL 181

Query: 241 GQPLPFSITTLIWIEVLVIGYIEFQRNSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQL 300
           GQPLPFS+TTLIWIEVLV+GYIEFQRNSELDPEKR+YPGG YFDPLGLA DPEK   L+L
Sbjct: 182 GQPLPFSLTTLIWIEVLVVGYIEFQRNSELDPEKRIYPGG-YFDPLGLAADPEKLDTLKL 241

Query: 301 AEIKHARLAMVAFLGFAVQAAVTGKGPLNNWAT 330
           AEIKH+RLAMVAFL FA+QAA TGKGP++  AT
Sbjct: 242 AEIKHSRLAMVAFLIFALQAAFTGKGPVSFLAT 273

[Close]

BLAST of Lag0012380 vs. ExPASy Swiss-Prot
Match: Q93WD2 (Chlorophyll a-b binding protein CP29 OS=Chlamydomonas reinhardtii OX=3055 GN=Lhcb4 PE=1 SV=3)

HSP 1 Score: 251.5 bits (641), Expect = 1.4e-65
Identity = 132/219 (60.27%), Postives = 155/219 (70.78%), Query Frame = 0


Query: 113 LWFPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIG-TRFE 172
           LW P    PEWLDGSL GD GFDP GL KP+E++   +D  DQN AKN  G +    +  
Sbjct: 52  LWLPNTTRPEWLDGSLPGDRGFDPLGLSKPSEFVVIGVDENDQNAAKNNKGSVEAIVQAT 111

Query: 173 SSEVKS-TPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELV 232
             EV S     PY+EVFGL RFRECELIHGRWAMLA LGAL  E  TGV+W +AGKVEL 
Sbjct: 112 PDEVSSENRLAPYSEVFGLARFRECELIHGRWAMLACLGALVAEATTGVSWVEAGKVEL- 171

Query: 233 EGSSYLGQPLPFSITTLIWIEVLVIGYIEFQRNSELDPEKRLYPGGKYFDPLGLAEDPEK 292
           +G+SY G  LPFSIT LIWIEV+++G  EF RNSE +PEKR YPGG  FDPL LA + E+
Sbjct: 172 DGASYAGLSLPFSITQLIWIEVILVGGAEFYRNSETNPEKRCYPGG-VFDPLKLASEDEE 231

Query: 293 KAI-LQLAEIKHARLAMVAFLGFAVQAAVTGKGPLNNWA 329
           +A  L+ AEIKHARLAMV+F G+ VQA  TG+G L + A
Sbjct: 232 RAFRLKTAEIKHARLAMVSFFGYGVQALSTGEGALGSLA 268

[Close]

BLAST of Lag0012380 vs. ExPASy Swiss-Prot
Match: Q01667 (Chlorophyll a-b binding protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=LHCA1 PE=1 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.2e-37
Identity = 106/280 (37.86%), Postives = 146/280 (52.14%), Query Frame = 0


Query: 67  ATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPGAKAPEWLDG 126
           A++S +   +A V PS     ++  F     P   + +  +I     W PG   P +LDG
Sbjct: 2   ASNSLMSCGIAAVYPSL-LSSSKSKFVSAGVPLPNAGNVGRIRMAAHWMPGEPRPAYLDG 61

Query: 127 SLVGDYGFDPFGLGK-PAEYLQYDLDSLDQNLAKNVAGDIIGTRFESSEVKSTPFQPYTE 186
           S  GD+GFDP GLG+ PA                                          
Sbjct: 62  SAPGDFGFDPLGLGEVPA------------------------------------------ 121

Query: 187 VFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEG--SSYLGQPLPF- 246
              L+R++E ELIH RWAMLA  G L  E L    W  A +   + G  ++YLG P+P+ 
Sbjct: 122 --NLERYKESELIHCRWAMLAVPGILVPEALGYGNWVKAQEWAALPGGQATYLGNPVPWG 181

Query: 247 SITTLIWIEVLVIGYIEFQRNSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHA 306
           ++ T++ IE L I ++E QR+ E DPEK+ YPGG  FDPLG ++DP+K   L++ EIK+ 
Sbjct: 182 TLPTILAIEFLAIAFVEHQRSMEKDPEKKKYPGGA-FDPLGYSKDPKKLEELKVKEIKNG 235

Query: 307 RLAMVAFLGFAV-QAAVTGKGPLNNWATHLSDPLHTTIID 342
           RLA++AF+GF V Q+A  G GPL N ATHL+DP H  I D
Sbjct: 242 RLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGD 235

[Close]

BLAST of Lag0012380 vs. ExPASy TrEMBL
Match: A0A6J1HPL7 (Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111466190 PE=3 SV=1)

HSP 1 Score: 556.2 bits (1432), Expect = 9.5e-155
Identity = 271/284 (95.42%), Postives = 280/284 (98.59%), Query Frame = 0


Query: 63  ATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPGAKAPE 122
           AT+AATSSFIGTRLADVR SSGRVQARFSFGKKKSPAKKSPSSKQI DRPLWFPGAKAPE
Sbjct: 3   ATSAATSSFIGTRLADVRSSSGRVQARFSFGKKKSPAKKSPSSKQIPDRPLWFPGAKAPE 62

Query: 123 WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESSEVKSTPFQP 182
           WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGD+IGTRFE+SEVKSTPFQP
Sbjct: 63  WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDLIGTRFENSEVKSTPFQP 122

Query: 183 YTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPF 242
           YTEVFGLQRFRECELIHGRWAMLATLGAL+VEWLTGVTWQDAGKVELVEGSSYLGQPLPF
Sbjct: 123 YTEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPF 182

Query: 243 SITTLIWIEVLVIGYIEFQRNSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHA 302
           S+T LIWIEVLVIGYIEFQRN+EL+PEKRLYPGGK+FDPLGLAEDPEKKA+LQLAEIKHA
Sbjct: 183 SLTALIWIEVLVIGYIEFQRNAELEPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHA 242

Query: 303 RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFSSS 347
           RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIID FSSS
Sbjct: 243 RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSSS 286

[Close]

BLAST of Lag0012380 vs. ExPASy TrEMBL
Match: A0A5D3BBB3 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold78209G00840 PE=3 SV=1)

HSP 1 Score: 555.1 bits (1429), Expect = 2.1e-154
Identity = 271/283 (95.76%), Postives = 278/283 (98.23%), Query Frame = 0


Query: 63  ATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPGAKAPE 122
           ATAAATSSFIGTRLA++ PSSGRVQARF FGKKKSP KKSPSSK ISDRPLWFPGAKAPE
Sbjct: 2   ATAAATSSFIGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKGISDRPLWFPGAKAPE 61

Query: 123 WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESSEVKSTPFQP 182
           WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFES+EVKSTPFQP
Sbjct: 62  WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQP 121

Query: 183 YTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPF 242
           YTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPF
Sbjct: 122 YTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPF 181

Query: 243 SITTLIWIEVLVIGYIEFQRNSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHA 302
           S+TTLIWIEVLVIGYIEFQRN+ELDPEKRLYPGGK+FDPLGLAEDPEKKA+LQLAEIKHA
Sbjct: 182 SLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHA 241

Query: 303 RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFSS 346
           RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIID FSS
Sbjct: 242 RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 284

[Close]

BLAST of Lag0012380 vs. ExPASy TrEMBL
Match: A0A0A0KXI3 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa_4G308550 PE=3 SV=1)

HSP 1 Score: 555.1 bits (1429), Expect = 2.1e-154
Identity = 271/283 (95.76%), Postives = 278/283 (98.23%), Query Frame = 0


Query: 63  ATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPGAKAPE 122
           ATAAATSSF+GTRLA++ PSSGRVQARF FGKKKSP KKSPSSK ISDRPLWFPGAKAPE
Sbjct: 2   ATAAATSSFLGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKVISDRPLWFPGAKAPE 61

Query: 123 WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESSEVKSTPFQP 182
           WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFES+EVKSTPFQP
Sbjct: 62  WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQP 121

Query: 183 YTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPF 242
           YTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPF
Sbjct: 122 YTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPF 181

Query: 243 SITTLIWIEVLVIGYIEFQRNSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHA 302
           SITTLIWIEVLVIGYIEFQRN+ELDPEKRLYPGGK+FDPLGLAEDPEKKA+LQLAEIKHA
Sbjct: 182 SITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHA 241

Query: 303 RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFSS 346
           RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIID FSS
Sbjct: 242 RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 284

[Close]

BLAST of Lag0012380 vs. ExPASy TrEMBL
Match: A0A6J1DCA5 (Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111019415 PE=3 SV=1)

HSP 1 Score: 555.1 bits (1429), Expect = 2.1e-154
Identity = 275/287 (95.82%), Postives = 282/287 (98.26%), Query Frame = 0


Query: 60  AATATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPGAK 119
           AATATAAATSSFIGTRL DVRPSSGRVQARFSFGKKK+  KK  SSKQISDRPLWFPGAK
Sbjct: 3   AATATAAATSSFIGTRLPDVRPSSGRVQARFSFGKKKTAPKK--SSKQISDRPLWFPGAK 62

Query: 120 APEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESSEVKSTP 179
           APEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFE+S+VKSTP
Sbjct: 63  APEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFENSDVKSTP 122

Query: 180 FQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQP 239
           FQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQP
Sbjct: 123 FQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQP 182

Query: 240 LPFSITTLIWIEVLVIGYIEFQRNSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEI 299
           LPFSITTLIWIEVLVIGYIEFQRN+ELDPEKRLYPGGK+FDPLGLAEDPEKKA+LQLAEI
Sbjct: 183 LPFSITTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEI 242

Query: 300 KHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFSSS 347
           KHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIID+FSSS
Sbjct: 243 KHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDSFSSS 287

[Close]

BLAST of Lag0012380 vs. ExPASy TrEMBL
Match: A0A1S3BMH8 (Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491174 PE=3 SV=1)

HSP 1 Score: 555.1 bits (1429), Expect = 2.1e-154
Identity = 271/283 (95.76%), Postives = 278/283 (98.23%), Query Frame = 0


Query: 63  ATAAATSSFIGTRLADVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPGAKAPE 122
           ATAAATSSFIGTRLA++ PSSGRVQARF FGKKKSP KKSPSSK ISDRPLWFPGAKAPE
Sbjct: 2   ATAAATSSFIGTRLAEIVPSSGRVQARFGFGKKKSPPKKSPSSKGISDRPLWFPGAKAPE 61

Query: 123 WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESSEVKSTPFQP 182
           WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFES+EVKSTPFQP
Sbjct: 62  WLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESAEVKSTPFQP 121

Query: 183 YTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPF 242
           YTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPF
Sbjct: 122 YTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLGQPLPF 181

Query: 243 SITTLIWIEVLVIGYIEFQRNSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLAEIKHA 302
           S+TTLIWIEVLVIGYIEFQRN+ELDPEKRLYPGGK+FDPLGLAEDPEKKA+LQLAEIKHA
Sbjct: 182 SLTTLIWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLAEDPEKKAVLQLAEIKHA 241

Query: 303 RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFSS 346
           RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIID FSS
Sbjct: 242 RLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDNFSS 284

[Close]

BLAST of Lag0012380 vs. TAIR 10
Match: AT5G01530.1 (light harvesting complex photosystem II )

HSP 1 Score: 489.2 bits (1258), Expect = 2.7e-138
Identity = 241/290 (83.10%), Postives = 262/290 (90.34%), Query Frame = 0


Query: 59  MAAT-ATAAATSSFIGTRLA-DVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFP 118
           MAAT A AAA SS +GTR+A  + P SGR  A F FGKKK+  KKS      +DRPLW+P
Sbjct: 1   MAATSAAAAAASSIMGTRVAPGIHPGSGRFTAVFGFGKKKAAPKKSAKKTVTTDRPLWYP 60

Query: 119 GAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESSEVK 178
           GA +P+WLDGSLVGDYGFDPFGLGKPAEYLQ+D+DSLDQNLAKN+AGD+IGTR E+++ K
Sbjct: 61  GAISPDWLDGSLVGDYGFDPFGLGKPAEYLQFDIDSLDQNLAKNLAGDVIGTRTEAADAK 120

Query: 179 STPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYL 238
           STPFQPY+EVFG+QRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELV+GSSYL
Sbjct: 121 STPFQPYSEVFGIQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVDGSSYL 180

Query: 239 GQPLPFSITTLIWIEVLVIGYIEFQRNSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQL 298
           GQPLPFSI+TLIWIEVLVIGYIEFQRN+ELD EKRLYPGGK+FDPLGLA DPEK A LQL
Sbjct: 181 GQPLPFSISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQL 240

Query: 299 AEIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFSSS 347
           AEIKHARLAMVAFLGFAVQAA TGKGPLNNWATHLSDPLHTTIIDTFSSS
Sbjct: 241 AEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS 290

[Close]

BLAST of Lag0012380 vs. TAIR 10
Match: AT3G08940.2 (light harvesting complex photosystem II )

HSP 1 Score: 483.8 bits (1244), Expect = 1.2e-136
Identity = 239/289 (82.70%), Postives = 263/289 (91.00%), Query Frame = 0


Query: 59  MAATATAAATSSFIGTR-LADVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPG 118
           MAAT+TAAA SS +GTR ++D+  +S R  ARF FG KK+  KK+ +   ISDRPLWFPG
Sbjct: 1   MAATSTAAAASSIMGTRVVSDISSNSSRFTARFGFGTKKASPKKAKT--VISDRPLWFPG 60

Query: 119 AKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESSEVKS 178
           AK+PE+LDGSLVGDYGFDPFGLGKPAEYLQ+DLDSLDQNLAKN+ G++IGTR E+ + KS
Sbjct: 61  AKSPEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKS 120

Query: 179 TPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLG 238
           TPFQPY+EVFGLQRFRECELIHGRWAMLATLGA++VEWLTGVTWQDAGKVELV+GSSYLG
Sbjct: 121 TPFQPYSEVFGLQRFRECELIHGRWAMLATLGAITVEWLTGVTWQDAGKVELVDGSSYLG 180

Query: 239 QPLPFSITTLIWIEVLVIGYIEFQRNSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQLA 298
           QPLPFSI+TLIWIEVLVIGYIEFQRN+ELD EKRLYPGGK+FDPLGLA DP KKA LQLA
Sbjct: 181 QPLPFSISTLIWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLA 240

Query: 299 EIKHARLAMVAFLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTFSSS 347
           EIKHARLAMV FLGFAVQAA TGKGPLNNWATHLSDPLHTTIIDTFSSS
Sbjct: 241 EIKHARLAMVGFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTFSSS 287

[Close]

BLAST of Lag0012380 vs. TAIR 10
Match: AT2G40100.1 (light harvesting complex photosystem II )

HSP 1 Score: 417.9 bits (1073), Expect = 7.8e-117
Identity = 211/273 (77.29%), Postives = 230/273 (84.25%), Query Frame = 0


Query: 61  ATATAAATSSFIGTRLADVRPSSGRVQAR--FSFGKKK--SPAKKSPSSKQISDRPLWFP 120
           AT TAAA S   G R+ D RP +GRVQAR  FSFGKKK   P KKS   +   DR +WFP
Sbjct: 2   ATTTAAAASGIFGIRIQDPRPGTGRVQARFGFSFGKKKPAPPPKKSRQVQDDGDRLVWFP 61

Query: 121 GAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESSEVK 180
           GA  PEWLDGS++GD GFDPFGLGKPAEYLQYD D LDQNLAKNVAGDIIG   ESSE+K
Sbjct: 62  GANPPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESSEIK 121

Query: 181 STPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYL 240
            TPFQPYTEVFG+QRFRECELIHGRWAML TLGA++VE LTG+ WQDAGKVELVEGSSYL
Sbjct: 122 PTPFQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEALTGIAWQDAGKVELVEGSSYL 181

Query: 241 GQPLPFSITTLIWIEVLVIGYIEFQRNSELDPEKRLYPGGKYFDPLGLAEDPEKKAILQL 300
           GQPLPFS+TTLIWIEVLV+GYIEFQRNSELDPEKR+YPGG YFDPLGLA DPEK   L+L
Sbjct: 182 GQPLPFSLTTLIWIEVLVVGYIEFQRNSELDPEKRIYPGG-YFDPLGLAADPEKLDTLKL 241

Query: 301 AEIKHARLAMVAFLGFAVQAAVTGKGPLNNWAT 330
           AEIKH+RLAMVAFL FA+QAA TGKGP++  AT
Sbjct: 242 AEIKHSRLAMVAFLIFALQAAFTGKGPVSFLAT 273

[Close]

BLAST of Lag0012380 vs. TAIR 10
Match: AT3G08940.1 (light harvesting complex photosystem II )

HSP 1 Score: 267.7 bits (683), Expect = 1.3e-71
Identity = 135/185 (72.97%), Postives = 156/185 (84.32%), Query Frame = 0


Query: 59  MAATATAAATSSFIGTR-LADVRPSSGRVQARFSFGKKKSPAKKSPSSKQISDRPLWFPG 118
           MAAT+TAAA SS +GTR ++D+  +S R  ARF FG KK+  KK+ +   ISDRPLWFPG
Sbjct: 1   MAATSTAAAASSIMGTRVVSDISSNSSRFTARFGFGTKKASPKKAKT--VISDRPLWFPG 60

Query: 119 AKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESSEVKS 178
           AK+PE+LDGSLVGDYGFDPFGLGKPAEYLQ+DLDSLDQNLAKN+ G++IGTR E+ + KS
Sbjct: 61  AKSPEYLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLYGEVIGTRTEAVDPKS 120

Query: 179 TPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYLG 238
           TPFQPY+EVFGLQRFRECELIHGRWAMLATLGA++VEWLTGVTWQDAGKV  +  SS L 
Sbjct: 121 TPFQPYSEVFGLQRFRECELIHGRWAMLATLGAITVEWLTGVTWQDAGKVSPLFFSSLLR 180

Query: 239 QPLPF 243
             L F
Sbjct: 181 LCLAF 183

[Close]

BLAST of Lag0012380 vs. TAIR 10
Match: AT2G40100.2 (light harvesting complex photosystem II )

HSP 1 Score: 254.6 bits (649), Expect = 1.1e-67
Identity = 127/172 (73.84%), Postives = 138/172 (80.23%), Query Frame = 0


Query: 61  ATATAAATSSFIGTRLADVRPSSGRVQAR--FSFGKKK--SPAKKSPSSKQISDRPLWFP 120
           AT TAAA S   G R+ D RP +GRVQAR  FSFGKKK   P KKS   +   DR +WFP
Sbjct: 2   ATTTAAAASGIFGIRIQDPRPGTGRVQARFGFSFGKKKPAPPPKKSRQVQDDGDRLVWFP 61

Query: 121 GAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQYDLDSLDQNLAKNVAGDIIGTRFESSEVK 180
           GA  PEWLDGS++GD GFDPFGLGKPAEYLQYD D LDQNLAKNVAGDIIG   ESSE+K
Sbjct: 62  GANPPEWLDGSMIGDRGFDPFGLGKPAEYLQYDFDGLDQNLAKNVAGDIIGIIQESSEIK 121

Query: 181 STPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVE 229
            TPFQPYTEVFG+QRFRECELIHGRWAML TLGA++VE LTG+ WQDAGKVE
Sbjct: 122 PTPFQPYTEVFGIQRFRECELIHGRWAMLGTLGAIAVEALTGIAWQDAGKVE 173

The following BLAST results are available for this feature:

BLAST of Lag0012380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022966541.1	2.0e-154	95.42	chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucurbita maxima] >X...	[more]
XP_022151483.1	4.4e-154	95.82	chlorophyll a-b binding protein CP29.1, chloroplastic [Momordica charantia]	[more]
XP_004147887.1	4.4e-154	95.76	chlorophyll a-b binding protein CP29.1, chloroplastic [Cucumis sativus] >KGN5436...	[more]
XP_008449241.1	4.4e-154	95.76	PREDICTED: chlorophyll a-b binding protein CP29.1, chloroplastic-like [Cucumis m...	[more]
XP_038882769.1	4.4e-154	95.76	chlorophyll a-b binding protein CP29.1, chloroplastic-like [Benincasa hispida]	[more]

BLAST of Lag0012380 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q07473	3.9e-137	83.10	Chlorophyll a-b binding protein CP29.1, chloroplastic OS=Arabidopsis thaliana OX...	[more]
Q9XF88	1.6e-135	82.70	Chlorophyll a-b binding protein CP29.2, chloroplastic OS=Arabidopsis thaliana OX...	[more]
Q9S7W1	1.1e-115	77.29	Chlorophyll a-b binding protein CP29.3, chloroplastic OS=Arabidopsis thaliana OX...	[more]
Q93WD2	1.4e-65	60.27	Chlorophyll a-b binding protein CP29 OS=Chlamydomonas reinhardtii OX=3055 GN=Lhc...	[more]
Q01667	1.2e-37	37.86	Chlorophyll a-b binding protein 6, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]

BLAST of Lag0012380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HPL7	9.5e-155	95.42	Chlorophyll a-b binding protein, chloroplastic OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A5D3BBB3	2.1e-154	95.76	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo var. makuwa OX=11...	[more]
A0A0A0KXI3	2.1e-154	95.76	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis sativus OX=3659 GN=Csa...	[more]
A0A6J1DCA5	2.1e-154	95.82	Chlorophyll a-b binding protein, chloroplastic OS=Momordica charantia OX=3673 GN...	[more]
A0A1S3BMH8	2.1e-154	95.76	Chlorophyll a-b binding protein, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103...	[more]

BLAST of Lag0012380 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G01530.1	2.7e-138	83.10	light harvesting complex photosystem II	[more]
AT3G08940.2	1.2e-136	82.70	light harvesting complex photosystem II	[more]
AT2G40100.1	7.8e-117	77.29	light harvesting complex photosystem II	[more]
AT3G08940.1	1.3e-71	72.97	light harvesting complex photosystem II	[more]
AT2G40100.2	1.1e-67	73.84	light harvesting complex photosystem II	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023329	Chlorophyll a/b binding domain superfamily	GENE3D	1.10.3460.10	Chlorophyll a/b binding protein domain	coord: 114..346 e-value: 2.3E-69 score: 235.3
IPR022796	Chlorophyll A-B binding protein	PFAM	PF00504	Chloroa_b-bind	coord: 120..316 e-value: 1.1E-50 score: 172.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 89..111
None	No IPR available	PANTHER	PTHR21649:SF71	CHLOROPHYLL A-B BINDING PROTEIN CP29.2, CHLOROPLASTIC	coord: 59..346
None	No IPR available	SUPERFAMILY	103511	Chlorophyll a-b binding protein	coord: 107..344
IPR001344	Chlorophyll A-B binding protein, plant and chromista	PANTHER	PTHR21649	CHLOROPHYLL A/B BINDING PROTEIN	coord: 59..346

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0012380.1	Lag0012380.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009768	photosynthesis, light harvesting in photosystem I
biological_process	GO:0018298	protein-chromophore linkage
biological_process	GO:0009416	response to light stimulus
biological_process	GO:0009765	photosynthesis, light harvesting
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0009522	photosystem I
cellular_component	GO:0009523	photosystem II
cellular_component	GO:0016020	membrane
molecular_function	GO:0016168	chlorophyll binding