Lag0012364 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0012364
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	protein N-terminal and lysine N-methyltransferase EFM7 isoform X1
Location	chr1: 40427549 .. 40428625 (+)
RNA-Seq Expression	Lag0012364
Synteny	Lag0012364

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCACACGGCAGCCAGCAGCTGCTCAATACAATTGCCAAGGGACTGCGGAAATCACCAATGGATCCTCAAATCTCGAAACATTTCCTCCTGACCCTTGGGGTAAAAAGGGTCAATGAAATAAATGCTGAACCCGGGTTTCCATTCTATTTTTGCCAAAAATATTCCAGTTTGCCGTTTTCTGTACTTTTGCCTCTCTCCATTCTCCACCCCATTAAGAGTTTTTGCAGATTCTAATGTCCCATGTCTATCATCCCTTTAAATTTTTTTTGTCTCTTTTTCTTGTTTTCCTGTCTTCTCTAGTTAGAATTGTCTAAAGTCGTTCCGAAATTTTGTCTGCCGACTGAAACCAAGGTAAATTTTGAGTATGTTTGGGTCTACGTAGGAACATTTTGAAAGACCATCATAGTGGTCCTAAATTTTGGGGTCACATTGTTAAGGACCATTGTGGAAACTGGAGACTATTATTATGAACACTTATATTAGTAGTCCACTTTGTTGAGCTTCGTGTAAATGTTTGAATTCACAAGTTAGTAGTCCACTTTGTGGAGACTATTCTTCACTTTTATGCGACTTTTCAGCCTTCAGGTAAAGAATCATAGATATCCTTACGAAGTTTATGCTACTGATGATTATTTCAGAAGTAAAGTGCCAACTCCAAATCATGTTTTTATCTCCTAACTTGTTAAGGAGTCCTTTTCATATCTCTCTCCTTTCAGATGTGAAACAGTATCCAAACTTGATAAAAACGCTATCGTATCTTCTCAAGTCGTACGATTACAAGCAAAAGTGCAACGAAACGGCTTCTCTGTCTGCCACTGGAAGCAATGGTAATGCCAATCTTGCAAGTTTTATGATTTTGCATTGCAAGGTAAGAACATTTATCTAACTTTTGATGGCTCTTCTGTGCTCTCAGAGGCTGGTGGTGCACCCTTGGCGCAGCCAATGTTTCTAATGAGCTGGAGGCGCAGAATTGGAAAGGAGGATGAGTTGCTCTTCTTCACTGGTTGCGAAAATGCAGGTCTTGAAGTAAACCATTTGGGGTCCCGCGTCTATTGCATCAAATCCATGGAGTAA

mRNA sequence

ATGCCACACGGCAGCCAGCAGCTGCTCAATACAATTGCCAAGGGACTGCGGAAATCACCAATGGATCCTCAAATCTCGAAACATTTCCTCCTGACCCTTGGGTTAGAATTGTCTAAAGTCGTTCCGAAATTTTGTCTGCCGACTGAAACCAAGGTAAAGAATCATAGATATCCTTACGAAGTTTATGCTACTGATGATTATTTCAGAAATGTGAAACAGTATCCAAACTTGATAAAAACGCTATCGTATCTTCTCAAGTCGTACGATTACAAGCAAAAGTGCAACGAAACGGCTTCTCTGTCTGCCACTGGAAGCAATGAGGCTGGTGGTGCACCCTTGGCGCAGCCAATGTTTCTAATGAGCTGGAGGCGCAGAATTGGAAAGGAGGATGAGTTGCTCTTCTTCACTGGTTGCGAAAATGCAGGTCTTGAAGTAAACCATTTGGGGTCCCGCGTCTATTGCATCAAATCCATGGAGTAA

Coding sequence (CDS)

ATGCCACACGGCAGCCAGCAGCTGCTCAATACAATTGCCAAGGGACTGCGGAAATCACCAATGGATCCTCAAATCTCGAAACATTTCCTCCTGACCCTTGGGTTAGAATTGTCTAAAGTCGTTCCGAAATTTTGTCTGCCGACTGAAACCAAGGTAAAGAATCATAGATATCCTTACGAAGTTTATGCTACTGATGATTATTTCAGAAATGTGAAACAGTATCCAAACTTGATAAAAACGCTATCGTATCTTCTCAAGTCGTACGATTACAAGCAAAAGTGCAACGAAACGGCTTCTCTGTCTGCCACTGGAAGCAATGAGGCTGGTGGTGCACCCTTGGCGCAGCCAATGTTTCTAATGAGCTGGAGGCGCAGAATTGGAAAGGAGGATGAGTTGCTCTTCTTCACTGGTTGCGAAAATGCAGGTCTTGAAGTAAACCATTTGGGGTCCCGCGTCTATTGCATCAAATCCATGGAGTAA

Protein sequence

MPHGSQQLLNTIAKGLRKSPMDPQISKHFLLTLGLELSKVVPKFCLPTETKVKNHRYPYEVYATDDYFRNVKQYPNLIKTLSYLLKSYDYKQKCNETASLSATGSNEAGGAPLAQPMFLMSWRRRIGKEDELLFFTGCENAGLEVNHLGSRVYCIKSME

Homology

[Close]

BLAST of Lag0012364 vs. NCBI nr
Match: XP_038880919.1 (protein N-terminal and lysine N-methyltransferase EFM7 isoform X1 [Benincasa hispida])

HSP 1 Score: 147.5 bits (371), Expect = 9.7e-32
Identity = 75/101 (74.26%), Postives = 82/101 (81.19%), Query Frame = 0


Query: 59  YEVYATDDYFRNVKQYPNLIKTLSYLLKSYDYKQKCNETASLSATGSNEAGGAPLAQPMF 118
           +++    D    VKQYPNLIKTLSYLL     K+K N+T SLSA GS+EA GA +AQPMF
Sbjct: 149 WDLVIASDILLYVKQYPNLIKTLSYLL-----KRKYNKTDSLSAIGSDEAAGATMAQPMF 208

Query: 119 LMSWRRRIGKEDELLFFTGCENAGLEVNHLGSRVYCIKSME 160
           LMSWRRRIGKEDELLFFTGCENAGLEV HLGSRVYCIKSME
Sbjct: 209 LMSWRRRIGKEDELLFFTGCENAGLEVKHLGSRVYCIKSME 244

[Close]

BLAST of Lag0012364 vs. NCBI nr
Match: XP_022151592.1 (protein N-terminal and lysine N-methyltransferase EFM7 isoform X1 [Momordica charantia])

HSP 1 Score: 146.0 bits (367), Expect = 2.8e-31
Identity = 72/100 (72.00%), Postives = 81/100 (81.00%), Query Frame = 0


Query: 59  YEVYATDDYFRNVKQYPNLIKTLSYLLKSYDYKQKCNETASLSATGSNEAGGAPLAQPMF 118
           +++    D    VKQYPNLIKTLS+LLKSY++KQ C E ASL ATGS+E G    AQPM 
Sbjct: 148 WDLVIASDILLYVKQYPNLIKTLSFLLKSYNFKQDCKEIASLPATGSDETG----AQPMC 207

Query: 119 LMSWRRRIGKEDELLFFTGCENAGLEVNHLGSRVYCIKSM 159
           LMSWRRRIGKEDELLFF+GCENAGLEV H+GSRVYCIKSM
Sbjct: 208 LMSWRRRIGKEDELLFFSGCENAGLEVKHVGSRVYCIKSM 243

[Close]

BLAST of Lag0012364 vs. NCBI nr
Match: XP_022151593.1 (protein N-terminal and lysine N-methyltransferase EFM7 isoform X2 [Momordica charantia])

HSP 1 Score: 146.0 bits (367), Expect = 2.8e-31
Identity = 72/100 (72.00%), Postives = 81/100 (81.00%), Query Frame = 0


Query: 59  YEVYATDDYFRNVKQYPNLIKTLSYLLKSYDYKQKCNETASLSATGSNEAGGAPLAQPMF 118
           +++    D    VKQYPNLIKTLS+LLKSY++KQ C E ASL ATGS+E G    AQPM 
Sbjct: 148 WDLVIASDILLYVKQYPNLIKTLSFLLKSYNFKQDCKEIASLPATGSDETG----AQPMC 207

Query: 119 LMSWRRRIGKEDELLFFTGCENAGLEVNHLGSRVYCIKSM 159
           LMSWRRRIGKEDELLFF+GCENAGLEV H+GSRVYCIKSM
Sbjct: 208 LMSWRRRIGKEDELLFFSGCENAGLEVKHVGSRVYCIKSM 243

[Close]

BLAST of Lag0012364 vs. NCBI nr
Match: XP_022151594.1 (protein N-terminal and lysine N-methyltransferase EFM7 isoform X3 [Momordica charantia])

HSP 1 Score: 146.0 bits (367), Expect = 2.8e-31
Identity = 72/100 (72.00%), Postives = 81/100 (81.00%), Query Frame = 0


Query: 59  YEVYATDDYFRNVKQYPNLIKTLSYLLKSYDYKQKCNETASLSATGSNEAGGAPLAQPMF 118
           +++    D    VKQYPNLIKTLS+LLKSY++KQ C E ASL ATGS+E G    AQPM 
Sbjct: 148 WDLVIASDILLYVKQYPNLIKTLSFLLKSYNFKQDCKEIASLPATGSDETG----AQPMC 207

Query: 119 LMSWRRRIGKEDELLFFTGCENAGLEVNHLGSRVYCIKSM 159
           LMSWRRRIGKEDELLFF+GCENAGLEV H+GSRVYCIKSM
Sbjct: 208 LMSWRRRIGKEDELLFFSGCENAGLEVKHVGSRVYCIKSM 243

[Close]

BLAST of Lag0012364 vs. NCBI nr
Match: XP_008449910.1 (PREDICTED: protein N-methyltransferase NNT1 isoform X1 [Cucumis melo] >KAA0031880.1 protein N-methyltransferase NNT1 isoform X1 [Cucumis melo var. makuwa] >TYK09509.1 protein N-methyltransferase NNT1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 142.5 bits (358), Expect = 3.1e-30
Identity = 71/101 (70.30%), Postives = 81/101 (80.20%), Query Frame = 0


Query: 59  YEVYATDDYFRNVKQYPNLIKTLSYLLKSYDYKQKCNETASLSATGSNEAGGAPLAQPMF 118
           +++    D    VKQYPNLIKTLSYLL     K+K ++T SLSA  S+E  GAP+A+PMF
Sbjct: 148 WDLVIASDILLYVKQYPNLIKTLSYLL-----KRKYSKTTSLSAVRSDETAGAPMAKPMF 207

Query: 119 LMSWRRRIGKEDELLFFTGCENAGLEVNHLGSRVYCIKSME 160
           LMSWRRRIGKEDELLFFTGCENAGLEV HLGSRVYCIKSM+
Sbjct: 208 LMSWRRRIGKEDELLFFTGCENAGLEVKHLGSRVYCIKSMD 243

The following BLAST results are available for this feature:

BLAST of Lag0012364 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038880919.1	9.7e-32	74.26	protein N-terminal and lysine N-methyltransferase EFM7 isoform X1 [Benincasa his...	[more]
XP_022151592.1	2.8e-31	72.00	protein N-terminal and lysine N-methyltransferase EFM7 isoform X1 [Momordica cha...	[more]
XP_022151593.1	2.8e-31	72.00	protein N-terminal and lysine N-methyltransferase EFM7 isoform X2 [Momordica cha...	[more]
XP_022151594.1	2.8e-31	72.00	protein N-terminal and lysine N-methyltransferase EFM7 isoform X3 [Momordica cha...	[more]
XP_008449910.1	3.1e-30	70.30	PREDICTED: protein N-methyltransferase NNT1 isoform X1 [Cucumis melo] >KAA003188...	[more]

BLAST of Lag0012364 vs. NCBI nr


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0012364.1	Lag0012364.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032259	methylation
molecular_function	GO:0008168	methyltransferase activity