Lag0012274 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0012274
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	zf-RVT domain-containing protein
Location	chr1: 39333735 .. 39336887 (+)
RNA-Seq Expression	Lag0012274
Synteny	Lag0012274

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTATATCCACTCTTTACACTATACATACCACTCGAACAATAGTGCCAGATCCATTTATTTGGAAAGCTTTCCATGGTTGTTTACCTACTCGGTATGGTCTATGGAAGCGTGGCATTGACATCTATCCTGCATGTCAAAGTTGTAAAGTCAAATGGGAGACTGTTGACCATGCTTTGTGTGGTTGCAGGGGGTCCAAACAGATATGTGATAACATGTTTCCTCGACTGGATGCCCATATTCCGGTGGGTAATAATTTTGCAGATCGTATCATCTGTCTTGCTAAGGGCCTTCAAATGGAATCTTTTGAACGGACCTGTATTACTTTTTGGACCTTATGGAATGATAGAAATAATTTTGTTTATAACGTTCCTATTATGGATTGGTCAAAAAGGTGTGAGTGGATATATGATTATTGGTCGGAATACAAGCCAAAGCAGTCTGTTATTGACATAATGGGACAGCAGATGGAGACAAATCACTCGCTGGTGGGCGATGGGGCGTCCTTCGGGGAGCAGGTTGCGATGGTTTCTTTATTTACATATGCTGCGGTTCGACCATCGTTGAAAGGTGCAGGTATGGGAGCTGTTGTCCTTGATAATTGTGGACAAACTGTAGCAGCAATGGAACTCTTTGAGGAAGCTTCACTCTCGGTCCTGGCCACTGAAGTTAAGGCAATCGTTGAAGGTTTGAGGTTGTTACAACGCATGGAAATTACACATGCAATGTCCAATCCGATTCATCAAACGCAATAAAGATGATTCGTGGAGATATTCCTATTATGTCTGAGGTTTATCATTGGGTTCAACAAATTCGGGCAATGGGTACAAAGTTTCAAGAGTTATCTTTCATTCATGTATCTAGAGAATGCAACGGACGGGCTGATCTGCTGGCCAAGCATGCTCTGGATCACCGAAATTCTATGTTATGGATTGGAAATGTTCCTCAACAAATTTCTTCAATGAGTGGTTCTACTCATTGCACTTGTAACGCTCTCTTTTCTATGACTTAATGAAATGATATTCCTTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAACTAAAACAAATTAGTTTGGATATCAATTTTTTTTTATTCATGGACTAAAATAGTGAAAGTTGAGAGAATAAAATAAAATAAAGTGGAAAGTTGAATGATCCGAACGAGATTTAATATCTACCCAAAGTCAATACAAACCTCAAAATGCACATTATTCCATTTTCACTTGTTTGCTACGTCGCCAATTAAACATAATACTTATTAAGATATCTACTTCTCTCGAGTAAGATGTTTGAGATTTGAATTCTCTCAACTCACATGTTGTTGAGCGCTATAAAAAAAAGTCTTTCTTTAAATAAATAAATAAATAAATATATATATATAATTTAACATGTCTAATATTTTCTTTTTTTAGTGCACAACCTTTAGGAGGGGATTCTCGCCTTGGCGCTGGTTGCAAAGGTGGTGAAGTTCGATTTCAGCCCTCGTTCTACCAATTTTTTGGCTCACCCCCTTGCGCGCGCTGTAGCCAGAAATAATGATTTTATGTTTTTCCTTTTTTATCCTTTTCCGCTCTCGAGAATGGATGATTTTGTTGGGGCTCATTCTGTTTGGCCCCTTGGTTCTCTACTATTTTGGAGAAGCTGATAGTTGTACCTAACTGTTCTTCTTTTTAATGATATTTTTTTTAAAAAAAAAAAAACCTTTAAGAGGGAAAAAAAATTAAACTTTAGATCTCTTACTCAATGGTACATGTCTATTTAAACTAGACACATTTTAACTAACATGTCTAAGCTTATCGGACTAAAATAGTTTTTCTTGGGTGGGATGAGAATAAATAATAATTTATAATCACTTTTTCCTTTTTTGGAAAGTAATTACTTTCTTTTCATTTTTTTAAAATATTTATTACTAATAACAGACATTAAAAGAAAAAAAAATATAAAGAAAAAAAAAAAGATGCCATGAAAAACGTCCATCATGAAATACCCTAATTTCAGTTGTCACTCGCAGTCCAAGGGGAGAAAAATGAAAAAGAAAAAGGAAATAGAGAAAGACAGAATAGAATCAAAACCAAATTCGATTTTTTTTTTCTTTTTTTTTTTGAAGAGAAAAACCAAATTCGATTTTACTTATTGGCTACCAAAAAAAAAAAAAAAAAGACTTTACTTATTTCCTTAATTTATAAAATTATCAATTTTTTTTAATAACCTTCAAAATATTTTAATAATATAGTTTTAATGCTTTTTTAAATTTCTATGTTTATTTTTTATCTTTTTTTTACCGAATGCATAAACGTAATTTTTTAAATATTAAATTACAAGTTTAGTTAATAAACTTTGAGGTTTGTGTCTAAAAAGTTGTTAAACTTTCAATTTTGTGTCTAATATGTTCAAAATTTTAGAAATTTAATTGATCTGTTAGACATAAAATTTGATTTTGTGTCTAATAAGACTCTAAACTTTCAATTTTGTGTCTAGATAGGTTCATGAATTTACAAAATCTTTGAATAAGTCAAAGACCTATTAGATACCAAAGTTGAAAATTCAGGGACCCATTGGACACAAAATTGAAAGTTTAATGATAGTTCAAGGATCTATTAGATGCAAAATTGAAAGTCGAGAGATTTATTGGACACAAAATTGAAAATTTAAAGATTCATATTTTAAGGTTCAGTGACCACATACACACAAACCTCACATCAAAACTAAACTTATAATTTAACATTTTTCTTAAAACACTTTTTTTAGTTCTACACGTTGACTGTTCTTTATATAAAAGTAATCAACAATTTGTATGTCTTTATCAAACGAAATAATGAATTTGATATCTCTATTTTATTCTTTTGGATCATATATGTTATAGGTGATTTTGGACCACCTCAATGCACAAGGAACTGACGAGGACAACCGGGCAGAAATCAGACTGAAAGATGGATCCAAGAGGCGAAACCGGCGAGTGGGACGGACCAAGACCGAAGGGTTCGGGCAGGGCTTTTGGCCCGACCCCCTGCTCGGCCTCGGCCCAAGGCCGAGGCATGGCCGAGGCCGGCCACCCGCTCGCGCGGGCCGAGCCCATTCGGCTCTGTTTGGTCCCCACCGCCTCTTGCTACCCCGGTTTCGCCTGGTTTATCCCGAAACGCCTCCGAATACTTAA

mRNA sequence

CTTATATCCACTCTTTACACTATACATACCACTCGAACAATAGTGCCAGATCCATTTATTTGGAAAGCTTTCCATGGTTGTTTACCTACTCGGTATGGTCTATGGAAGCGTGGCATTGACATCTATCCTGCATGTCAAAGTTGTAAAGTCAAATGGGAGACTGTTGACCATGCTTTGTGTGGTTGCAGGGGGTCCAAACAGATATGTGATAACATGTTTCCTCGACTGGATGCCCATATTCCGGTGGGTAATAATTTTGCAGATCGTATCATCTGTCTTGCTAAGGGCCTTCAAATGGAATCTTTTGAACGGACCTGTATTACTTTTTGGACCTTATGGAATGATAGAAATAATTTTGTTTATAACGTTCCTATTATGGATTGGTCAAAAAGGTGTGAGTGGATATATGATTATTGGTCGGAATACAAGCCAAAGCAGTCTGTTATTGACATAATGGGACAGCAGATGGAGACAAATCACTCGCTGGTGGGCGATGGGGCGTCCTTCGGGGAGCAGGTTGCGATGGTTTCTTTATTTACATATGCTGCGGTTCGACCATCGTTGAAAGGTGCAGGTATGGGAGCTGTTGTCCTTGATAATTGTGGACAAACTGTAGCAGCAATGGAACTCTTTGAGGAAGCTTCACTCTCGGTCCTGGCCACTGAAGTTAAGGCAATCGTTGAAGGTTTGAGAGAATGCAACGGACGGGCTGATCTGCTGGCCAAGCATGCTCTGGATCACCGAAATTCTATGTTATGGATTGGAAATGTGATTTTGGACCACCTCAATGCACAAGGAACTGACGAGGACAACCGGGCAGAAATCAGACTGAAAGATGGATCCAAGAGGCGAAACCGGCGAGTGGGACGGACCAAGACCGAAGGGTTCGGGCAGGGCTTTTGGCCCGACCCCCTGCTCGGCCTCGGCCCAAGGCCGAGGCATGGCCGAGGCCGGCCACCCGCTCGCGCGGGCCGAGCCCATTCGGCTCTGTTTGGTCCCCACCGCCTCTTGCTACCCCGGTTTCGCCTGGTTTATCCCGAAACGCCTCCGAATACTTAA

Coding sequence (CDS)

CTTATATCCACTCTTTACACTATACATACCACTCGAACAATAGTGCCAGATCCATTTATTTGGAAAGCTTTCCATGGTTGTTTACCTACTCGGTATGGTCTATGGAAGCGTGGCATTGACATCTATCCTGCATGTCAAAGTTGTAAAGTCAAATGGGAGACTGTTGACCATGCTTTGTGTGGTTGCAGGGGGTCCAAACAGATATGTGATAACATGTTTCCTCGACTGGATGCCCATATTCCGGTGGGTAATAATTTTGCAGATCGTATCATCTGTCTTGCTAAGGGCCTTCAAATGGAATCTTTTGAACGGACCTGTATTACTTTTTGGACCTTATGGAATGATAGAAATAATTTTGTTTATAACGTTCCTATTATGGATTGGTCAAAAAGGTGTGAGTGGATATATGATTATTGGTCGGAATACAAGCCAAAGCAGTCTGTTATTGACATAATGGGACAGCAGATGGAGACAAATCACTCGCTGGTGGGCGATGGGGCGTCCTTCGGGGAGCAGGTTGCGATGGTTTCTTTATTTACATATGCTGCGGTTCGACCATCGTTGAAAGGTGCAGGTATGGGAGCTGTTGTCCTTGATAATTGTGGACAAACTGTAGCAGCAATGGAACTCTTTGAGGAAGCTTCACTCTCGGTCCTGGCCACTGAAGTTAAGGCAATCGTTGAAGGTTTGAGAGAATGCAACGGACGGGCTGATCTGCTGGCCAAGCATGCTCTGGATCACCGAAATTCTATGTTATGGATTGGAAATGTGATTTTGGACCACCTCAATGCACAAGGAACTGACGAGGACAACCGGGCAGAAATCAGACTGAAAGATGGATCCAAGAGGCGAAACCGGCGAGTGGGACGGACCAAGACCGAAGGGTTCGGGCAGGGCTTTTGGCCCGACCCCCTGCTCGGCCTCGGCCCAAGGCCGAGGCATGGCCGAGGCCGGCCACCCGCTCGCGCGGGCCGAGCCCATTCGGCTCTGTTTGGTCCCCACCGCCTCTTGCTACCCCGGTTTCGCCTGGTTTATCCCGAAACGCCTCCGAATACTTAA

Protein sequence

LISTLYTIHTTRTIVPDPFIWKAFHGCLPTRYGLWKRGIDIYPACQSCKVKWETVDHALCGCRGSKQICDNMFPRLDAHIPVGNNFADRIICLAKGLQMESFERTCITFWTLWNDRNNFVYNVPIMDWSKRCEWIYDYWSEYKPKQSVIDIMGQQMETNHSLVGDGASFGEQVAMVSLFTYAAVRPSLKGAGMGAVVLDNCGQTVAAMELFEEASLSVLATEVKAIVEGLRECNGRADLLAKHALDHRNSMLWIGNVILDHLNAQGTDEDNRAEIRLKDGSKRRNRRVGRTKTEGFGQGFWPDPLLGLGPRPRHGRGRPPARAGRAHSALFGPHRLLLPRFRLVYPETPPNT

Homology

[Close]

BLAST of Lag0012274 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 95.5 bits (236), Expect = 9.7e-16
Identity = 61/214 (28.50%), Postives = 101/214 (47.20%), Query Frame = 0


Query: 19   FIWKAFHGCLPTRYGLWKRGIDIYPACQSCKVKWETVDHALCGCRGSKQICDNMFPRLDA 78
            FIW++ H  +PT   L  RGI   PAC  C  + E++ HA   C+ ++QI   +FP L  
Sbjct: 1147 FIWRSAHEHIPTAQNLLLRGIGELPACTICGDRRESIIHAFFHCKRARQIWRTLFPFLTC 1206

Query: 79   HIPVGN-NFADRIICLAKGLQMESFERTCITFWTLWNDRNNFVYNVPIMDWSKRCEWIYD 138
                 N +F +    L + L+ +      IT W +WNDRN+ ++   +     +CEW+  
Sbjct: 1207 LSAEDNISFLELWSSLTEQLEPKDLNLAAITGWGIWNDRNSLIHGKQVSPVEFKCEWLTP 1266

Query: 139  YWSEYKPKQSVIDIMGQQMETNHSLVGDGASFGEQVAMVSLFTYAAVRPSLKGAGMGAVV 198
            +   +   Q+ +     + ++NH  V         V++  L T AA R +      G ++
Sbjct: 1267 FLDSH--SQAQMSNYSPRTQSNHRPVVQYWRPSSSVSL-KLNTDAACRGA--STSFGCII 1326

Query: 199  LDNCGQTVAAMELFEEASLSVLATEVKAIVEGLR 232
             D+    VAA  +     LS L  E++ I+EGL+
Sbjct: 1327 RDSSCSLVAATSIRVPFPLSPLLAEIRCILEGLK 1355

[Close]

BLAST of Lag0012274 vs. NCBI nr
Match: XP_022145060.1 (uncharacterized protein LOC111014578 [Momordica charantia])

HSP 1 Score: 94.7 bits (234), Expect = 1.6e-15
Identity = 58/213 (27.23%), Postives = 97/213 (45.54%), Query Frame = 0


Query: 19  FIWKAFHGCLPTRYGLWKRGIDIYPACQSCKVKWETVDHALCGCRGSKQICDNMFPRLDA 78
           F+W+ F+ C+P+   L KRGID  P C  C  + ET DHAL  C+ +K++ + + P+   
Sbjct: 2   FLWRVFNDCVPSMRNLIKRGIDPNPNCLVCGKQIETTDHALFKCKRAKEVWNILLPQAFP 61

Query: 79  HIPVGNNFADRIICLAKGLQMESFERTCITFWTLWNDRNNFVYNVPIMDWSKRCEWIYDY 138
                N+  D ++ L + L    F+   +  W +WNDRN       I D   R +WI  Y
Sbjct: 62  QCDFNNSVQDGLLYLVESLSTPDFDLVGVGVWAIWNDRNAIRMQRQIPDAKIRSDWILTY 121

Query: 139 WSEYKPKQ--SVIDIMGQQMETNHSLVGDGASFGEQVAMVSLFTYAAVRPSLKGAGMGAV 198
             +++ +   S+ D   Q+  +++    +          + +   AA +      G+G V
Sbjct: 122 VRDFQVRDVPSLGDFRIQEDASSNDRTIENYWSPPPAGWIKINVDAACKKHQFRTGIGIV 181

Query: 199 VLDNCGQTVAAMELFEEASLSVLATEVKAIVEG 230
             +  GQ +AA      AS   L  E  A+ +G
Sbjct: 182 CRNEKGQILAA------ASHDPLMAESLALFDG 208

[Close]

BLAST of Lag0012274 vs. NCBI nr
Match: XP_030505962.1 (uncharacterized protein LOC115720894 [Cannabis sativa])

HSP 1 Score: 88.6 bits (218), Expect = 1.2e-13
Identity = 56/217 (25.81%), Postives = 95/217 (43.78%), Query Frame = 0


Query: 19   FIWKAFHGCLPTRYGLWKRGIDIYPACQSCKVKWETVDHALCGCRGSKQICDNMFPRLDA 78
            F+WKAFH  +PT   L    I    AC  C   WE++ HAL  C+ +K++  +    LD 
Sbjct: 867  FVWKAFHRAIPTAASLCNMKIIDSAACSLCSNAWESIKHALLLCKHAKKVWHSAGYSLDY 926

Query: 79   HIPVGNNFADRIICLAKGLQMESFERTCITFWTLWNDRNNFVYNVPIMDWSKRCEWIYDY 138
             +     F+D ++ L+        E+   T W LW DRNN+++  P++  S+       Y
Sbjct: 927  DMLARMKFSDCLVLLSTLKTTSEMEQMFCTMWFLWTDRNNYIHGKPVLSPSQIWAKSAAY 986

Query: 139  WSEYKPKQSVIDIMGQQMETNHSLVGDGASFGEQ-----VAMVSLFTYAAVRPSLKGAGM 198
            +  ++   ++          N  ++  GA+   +     +  + +   AA   S    G+
Sbjct: 987  YCNFQHHSTI---------QNSPMISTGAATQSKWIRPPLNELKMNVDAACDVSRNKIGV 1046

Query: 199  GAVVLDNCGQTVAAMELFEEASLSVLATEVKAIVEGL 231
            G +V ++ GQ VAA              E KA++ GL
Sbjct: 1047 GIIVRNSSGQIVAAYSKSFTGRYKSQEMEAKALLTGL 1074

[Close]

BLAST of Lag0012274 vs. NCBI nr
Match: XP_030509046.1 (uncharacterized protein LOC115723707 [Cannabis sativa])

HSP 1 Score: 88.2 bits (217), Expect = 1.5e-13
Identity = 44/144 (30.56%), Postives = 66/144 (45.83%), Query Frame = 0


Query: 19  FIWKAFHGCLPTRYGLWKRGIDIYPACQSCKVKWETVDHALCGCRGSKQICDNMFPRLDA 78
           F WK     LP    L KR +     C  CK  WE++ HAL  C+ +K I  N   ++D 
Sbjct: 766 FTWKVIQNALPVTTALHKRKVIDSALCTRCKSAWESIGHALFSCKFAKSIWKNTKFQIDT 825

Query: 79  HIPVGNNFADRIICLAKGLQMESFERTCITFWTLWNDRNNFVYNVPIMDWSKRCEWIYDY 138
           H  +G    D +I LA  +  E+FE      W++WNDRN F++     D      +  +Y
Sbjct: 826 HHAMGMFNGDYLIHLASTMDKENFEALICVMWSIWNDRNKFLHGGKQRDSFTLASYALNY 885

Query: 139 WSEYKPKQSVIDIMGQQ--METNH 161
             +Y+  + +     QQ   + NH
Sbjct: 886 IEQYRSAKRISCTKLQQPHQQINH 909

[Close]

BLAST of Lag0012274 vs. NCBI nr
Match: XP_030502714.1 (uncharacterized protein LOC115717884 [Cannabis sativa])

HSP 1 Score: 87.0 bits (214), Expect = 3.4e-13
Identity = 65/268 (24.25%), Postives = 110/268 (41.04%), Query Frame = 0


Query: 19   FIWKAFHGCLPTRYGLWKRGIDIYPACQSCKVKWETVDHALCGCRGSKQICDNMFPRLDA 78
            F+W+     +P    L+ R I   P C  CK   ETV HAL GC   ++   +       
Sbjct: 807  FMWRVVSHTIPVASNLFVRHILYSPLCSFCKSSLETVHHALLGCSRLRKAWKSSRFLDHY 866

Query: 79   HIPVGNNFADRIICLAKGLQMESFERTCITFWTLWNDRNNFVYNVPIMDWSKRCEWIYDY 138
            H     +  D ++C  + L  +         W LWN RNN++++  +M  +   +W  +Y
Sbjct: 867  HKYKHLDITDFLLCSFEALDKDYISILFCFLWALWNQRNNYIHHHTVMPAADIFDWSVNY 926

Query: 139  WSEYKPKQSVIDIMGQQMETNHSLVGDGASFGEQVAMVSLFTYAAVRPSLKGAGMGAVVL 198
            + +Y   Q  I       +   S+V DG S     + + ++T AA+    +    G VV+
Sbjct: 927  FFQYIDAQKNIQTCSVAAQA-PSMVSDGVS----GSSLQVYTDAAIDNCGQRHSFGIVVV 986

Query: 199  DNCGQTVAAM---------ELFEEAS---------------LSVLATEVKAIVEGLRECN 258
            DN G   A +          +  EA                + +L T+ K IV+ L  CN
Sbjct: 987  DNSGLMKAGVVKPCIGGIPAIIAEAKAIYHALQWVQLLHLPVDILKTDCKTIVDKLNSCN 1046

Query: 259  GRADLLAKHALDHRNSMLWIGNVILDHL 263
              A  L    +  +N + +  N+ ++H+
Sbjct: 1047 WNASPLDDILMGIKNLLSFSPNLRIEHV 1069

[Close]

BLAST of Lag0012274 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 4.7e-16
Identity = 61/214 (28.50%), Postives = 101/214 (47.20%), Query Frame = 0


Query: 19   FIWKAFHGCLPTRYGLWKRGIDIYPACQSCKVKWETVDHALCGCRGSKQICDNMFPRLDA 78
            FIW++ H  +PT   L  RGI   PAC  C  + E++ HA   C+ ++QI   +FP L  
Sbjct: 1147 FIWRSAHEHIPTAQNLLLRGIGELPACTICGDRRESIIHAFFHCKRARQIWRTLFPFLTC 1206

Query: 79   HIPVGN-NFADRIICLAKGLQMESFERTCITFWTLWNDRNNFVYNVPIMDWSKRCEWIYD 138
                 N +F +    L + L+ +      IT W +WNDRN+ ++   +     +CEW+  
Sbjct: 1207 LSAEDNISFLELWSSLTEQLEPKDLNLAAITGWGIWNDRNSLIHGKQVSPVEFKCEWLTP 1266

Query: 139  YWSEYKPKQSVIDIMGQQMETNHSLVGDGASFGEQVAMVSLFTYAAVRPSLKGAGMGAVV 198
            +   +   Q+ +     + ++NH  V         V++  L T AA R +      G ++
Sbjct: 1267 FLDSH--SQAQMSNYSPRTQSNHRPVVQYWRPSSSVSL-KLNTDAACRGA--STSFGCII 1326

Query: 199  LDNCGQTVAAMELFEEASLSVLATEVKAIVEGLR 232
             D+    VAA  +     LS L  E++ I+EGL+
Sbjct: 1327 RDSSCSLVAATSIRVPFPLSPLLAEIRCILEGLK 1355

[Close]

BLAST of Lag0012274 vs. ExPASy TrEMBL
Match: A0A6J1CTE3 (uncharacterized protein LOC111014578 OS=Momordica charantia OX=3673 GN=LOC111014578 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 8.0e-16
Identity = 58/213 (27.23%), Postives = 97/213 (45.54%), Query Frame = 0


Query: 19  FIWKAFHGCLPTRYGLWKRGIDIYPACQSCKVKWETVDHALCGCRGSKQICDNMFPRLDA 78
           F+W+ F+ C+P+   L KRGID  P C  C  + ET DHAL  C+ +K++ + + P+   
Sbjct: 2   FLWRVFNDCVPSMRNLIKRGIDPNPNCLVCGKQIETTDHALFKCKRAKEVWNILLPQAFP 61

Query: 79  HIPVGNNFADRIICLAKGLQMESFERTCITFWTLWNDRNNFVYNVPIMDWSKRCEWIYDY 138
                N+  D ++ L + L    F+   +  W +WNDRN       I D   R +WI  Y
Sbjct: 62  QCDFNNSVQDGLLYLVESLSTPDFDLVGVGVWAIWNDRNAIRMQRQIPDAKIRSDWILTY 121

Query: 139 WSEYKPKQ--SVIDIMGQQMETNHSLVGDGASFGEQVAMVSLFTYAAVRPSLKGAGMGAV 198
             +++ +   S+ D   Q+  +++    +          + +   AA +      G+G V
Sbjct: 122 VRDFQVRDVPSLGDFRIQEDASSNDRTIENYWSPPPAGWIKINVDAACKKHQFRTGIGIV 181

Query: 199 VLDNCGQTVAAMELFEEASLSVLATEVKAIVEG 230
             +  GQ +AA      AS   L  E  A+ +G
Sbjct: 182 CRNEKGQILAA------ASHDPLMAESLALFDG 208

[Close]

BLAST of Lag0012274 vs. ExPASy TrEMBL
Match: A0A803NI87 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 5.7e-14
Identity = 56/217 (25.81%), Postives = 95/217 (43.78%), Query Frame = 0


Query: 19  FIWKAFHGCLPTRYGLWKRGIDIYPACQSCKVKWETVDHALCGCRGSKQICDNMFPRLDA 78
           F+WKAFH  +PT   L    I    AC  C   WE++ HAL  C+ +K++  +    LD 
Sbjct: 728 FVWKAFHRAIPTAASLCNMKIIDSAACSLCSNAWESIKHALLLCKHAKKVWHSAGYSLDY 787

Query: 79  HIPVGNNFADRIICLAKGLQMESFERTCITFWTLWNDRNNFVYNVPIMDWSKRCEWIYDY 138
            +     F+D ++ L+        E+   T W LW DRNN+++  P++  S+       Y
Sbjct: 788 DMLARMKFSDCLVLLSTLKTTSEMEQMFCTMWFLWTDRNNYIHGKPVLSPSQIWAKSAAY 847

Query: 139 WSEYKPKQSVIDIMGQQMETNHSLVGDGASFGEQ-----VAMVSLFTYAAVRPSLKGAGM 198
           +  ++   ++          N  ++  GA+   +     +  + +   AA   S    G+
Sbjct: 848 YCNFQHHSTI---------QNSPMISTGAATQSKWIRPPLNELKMNVDAACDVSRNKIGV 907

Query: 199 GAVVLDNCGQTVAAMELFEEASLSVLATEVKAIVEGL 231
           G +V ++ GQ VAA              E KA++ GL
Sbjct: 908 GIIVRNSSGQIVAAYSKSFTGRYKSQEMEAKALLTGL 935

[Close]

BLAST of Lag0012274 vs. ExPASy TrEMBL
Match: A0A803Q6Y1 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 7.5e-14
Identity = 44/144 (30.56%), Postives = 66/144 (45.83%), Query Frame = 0


Query: 19   FIWKAFHGCLPTRYGLWKRGIDIYPACQSCKVKWETVDHALCGCRGSKQICDNMFPRLDA 78
            F WK     LP    L KR +     C  CK  WE++ HAL  C+ +K I  N   ++D 
Sbjct: 1302 FTWKVIQNALPVTTALHKRKVIDSALCTRCKSAWESIGHALFSCKFAKSIWKNTKFQIDT 1361

Query: 79   HIPVGNNFADRIICLAKGLQMESFERTCITFWTLWNDRNNFVYNVPIMDWSKRCEWIYDY 138
            H  +G    D +I LA  +  E+FE      W++WNDRN F++     D      +  +Y
Sbjct: 1362 HHAMGMFNGDYLIHLASTMDKENFEALICVMWSIWNDRNKFLHGGKQRDSFTLASYALNY 1421

Query: 139  WSEYKPKQSVIDIMGQQ--METNH 161
              +Y+  + +     QQ   + NH
Sbjct: 1422 IEQYRSAKRISCTKLQQPHQQINH 1445

[Close]

BLAST of Lag0012274 vs. ExPASy TrEMBL
Match: A0A803PGT3 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 9.8e-14
Identity = 63/217 (29.03%), Postives = 93/217 (42.86%), Query Frame = 0


Query: 19   FIWKAFHGCLPTRYGLWKRGIDIYPACQSCKVKWETVDHALCGCRGSKQICD-----NMF 78
            F+W+  H  LP++  L KRGI +   C  C  + ET+ HAL  C   K +       ++F
Sbjct: 1221 FVWRVCHNRLPSKSELVKRGIQLDSTCSGCWNREETIGHALWKCPRLKVVWQTAGFWHLF 1280

Query: 79   PRLDAHIPVGNNFADRIICLAKGLQMESFERTCITFWTLWNDRNNFVYNVPIMDWSKRCE 138
            PR    I    +  D  I +      E FE      W +WN RN  ++     D      
Sbjct: 1281 PR---DIEFMTDLLDFFIYMKTKCSTEEFEIFLGLSWLVWNQRNQRIFQNKKTDLESWIP 1340

Query: 139  WIYDYWSEYKPKQSVIDIMGQQMETNHSLVGDGASFGEQVAMVSLFTYAAVRPSLKGAGM 198
            W  DY +    +    DI  +  +TNH   G  +          +   A V  +LKG G+
Sbjct: 1341 WAIDYTNSLLQR----DINTKNQQTNH---GKRSWTAPTAGTFMVNCDALVVSNLKGYGL 1400

Query: 199  GAVVLDNCGQTVAAMELFEEASLSVLATEVKAIVEGL 231
             AV+ D  G+ VAA   F+   +SV+  E+ A+  GL
Sbjct: 1401 AAVIRDAEGRLVAAEVKFKSGFVSVITAELLAVQLGL 1427

The following BLAST results are available for this feature:

BLAST of Lag0012274 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158377.1	9.7e-16	28.50	uncharacterized protein LOC111024874 [Momordica charantia]	[more]
XP_022145060.1	1.6e-15	27.23	uncharacterized protein LOC111014578 [Momordica charantia]	[more]
XP_030505962.1	1.2e-13	25.81	uncharacterized protein LOC115720894 [Cannabis sativa]	[more]
XP_030509046.1	1.5e-13	30.56	uncharacterized protein LOC115723707 [Cannabis sativa]	[more]
XP_030502714.1	3.4e-13	24.25	uncharacterized protein LOC115717884 [Cannabis sativa]	[more]

BLAST of Lag0012274 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0012274 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DX30	4.7e-16	28.50	uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024...	[more]
A0A6J1CTE3	8.0e-16	27.23	uncharacterized protein LOC111014578 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A803NI87	5.7e-14	25.81	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A803Q6Y1	7.5e-14	30.56	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A803PGT3	9.8e-14	29.03	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]

BLAST of Lag0012274 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026960	Reverse transcriptase zinc-binding domain	PFAM	PF13966	zf-RVT	coord: 19..67 e-value: 1.7E-8 score: 35.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 282..328

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0012274.1	Lag0012274.1	mRNA