Lag0011943 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAGATCTTCAACAGCACCTATCAGCATATGCCTCTATCAGCCCCCCCCCCCAACCGGATAAAGCTTTACTAGCTTGCGAAGATGAGGAACAAGCTCGAGTCCTAACAAAAATCAAAGGATGGTACAAGGTTGGAAAATATCAGCTTAGATTCTACCCTTGGAACTCTGATGTCATAAGCCGAGAACAAAAGGTTCCTTCATATGGGGGATGGATAAAGGCCCGCAATCTTCCTCTAGACAAATGGTCCTTTGAAGTTTTTAAAATGATCGGAGATGAATGTGGTGGTTATGTGGAAACAGCTACAAAGACCCTTACTCGACTGGATATGATGGAGATTATGATTAAAGTGAAACCCAATCGCACAGGCTTTATCCCAGCTAAGGTGCATATTCCGTCATCATCAAGCAGCCCTATTAAGGTCAGTATCGACCCATTCTTTATGGAGGAATATTATATAGGATATCTTGCCGGAATCCATGGCAGAATCCCAACAGAGTTGGCGAAATCAGATGAAGCTCGCACAGAAGATGTCGCTTACCAAGGAAATTCAAAGCCACGCGCCACCCTTGCGAAGATTAATGAAAATGGGGAATATCCCCAGATATCGTACCAGTGCCCATCCCAAAGAGACCCCTCTGAAGCTTGTCAAACAGAAGAATTTCAGACGCGATCAGTCTGGGTCCCACGGCAACCGATTGACCATGTGATCCCCCAATCCCAAAAAACCATCACCACCAGCATAAAAAACCCTAATCCCCACCCCGACAATATTACCCATCCTGAGGCCCACCACAATCAACCTAACTCAAAAAGCCCACTTCAGCCTGTTGGCCCACCAAAACCTCTCCCCAATCCTCATAAACCTCTTATCTTCCCCGAACTAGAAGTCACATCTGGGATCCACATCCCAACTAGCCCGCCACCAAGTGACCCAATCCCAACAAAAAATACCCTACATGGTCGAAAGAAGCCCATCACTATCAATAATAAGAAACCTATCTCTTAA ATGAGAGATCTTCAACAGCACCTATCAGCATATGCCTCTATCAGCCCCCCCCCCCAACCGGATAAAGCTTTACTAGCTTGCGAAGATGAGGAACAAGCTCGAGTCCTAACAAAAATCAAAGGATGGTACAAGGTTGGAAAATATCAGCTTAGATTCTACCCTTGGAACTCTGATGTCATAAGCCGAGAACAAAAGGTTCCTTCATATGGGGGATGGATAAAGGCCCGCAATCTTCCTCTAGACAAATGGTCCTTTGAAGTTTTTAAAATGATCGGAGATGAATGTGGTGGTTATGTGGAAACAGCTACAAAGACCCTTACTCGACTGGATATGATGGAGATTATGATTAAAGTGAAACCCAATCGCACAGGCTTTATCCCAGCTAAGGTGCATATTCCGTCATCATCAAGCAGCCCTATTAAGGTCAGTATCGACCCATTCTTTATGGAGGAATATTATATAGGATATCTTGCCGGAATCCATGGCAGAATCCCAACAGAGTTGGCGAAATCAGATGAAGCTCGCACAGAAGATGTCGCTTACCAAGGAAATTCAAAGCCACGCGCCACCCTTGCGAAGATTAATGAAAATGGGGAATATCCCCAGATATCGTACCAGTGCCCATCCCAAAGAGACCCCTCTGAAGCTTGTCAAACAGAAGAATTTCAGACGCGATCAGTCTGGGTCCCACGGCAACCGATTGACCATGTGATCCCCCAATCCCAAAAAACCATCACCACCAGCATAAAAAACCCTAATCCCCACCCCGACAATATTACCCATCCTGAGGCCCACCACAATCAACCTAACTCAAAAAGCCCACTTCAGCCTGTTGGCCCACCAAAACCTCTCCCCAATCCTCATAAACCTCTTATCTTCCCCGAACTAGAAGTCACATCTGGGATCCACATCCCAACTAGCCCGCCACCAAGTGACCCAATCCCAACAAAAAATACCCTACATGGTCGAAAGAAGCCCATCACTATCAATAATAAGAAACCTATCTCTTAA ATGAGAGATCTTCAACAGCACCTATCAGCATATGCCTCTATCAGCCCCCCCCCCCAACCGGATAAAGCTTTACTAGCTTGCGAAGATGAGGAACAAGCTCGAGTCCTAACAAAAATCAAAGGATGGTACAAGGTTGGAAAATATCAGCTTAGATTCTACCCTTGGAACTCTGATGTCATAAGCCGAGAACAAAAGGTTCCTTCATATGGGGGATGGATAAAGGCCCGCAATCTTCCTCTAGACAAATGGTCCTTTGAAGTTTTTAAAATGATCGGAGATGAATGTGGTGGTTATGTGGAAACAGCTACAAAGACCCTTACTCGACTGGATATGATGGAGATTATGATTAAAGTGAAACCCAATCGCACAGGCTTTATCCCAGCTAAGGTGCATATTCCGTCATCATCAAGCAGCCCTATTAAGGTCAGTATCGACCCATTCTTTATGGAGGAATATTATATAGGATATCTTGCCGGAATCCATGGCAGAATCCCAACAGAGTTGGCGAAATCAGATGAAGCTCGCACAGAAGATGTCGCTTACCAAGGAAATTCAAAGCCACGCGCCACCCTTGCGAAGATTAATGAAAATGGGGAATATCCCCAGATATCGTACCAGTGCCCATCCCAAAGAGACCCCTCTGAAGCTTGTCAAACAGAAGAATTTCAGACGCGATCAGTCTGGGTCCCACGGCAACCGATTGACCATGTGATCCCCCAATCCCAAAAAACCATCACCACCAGCATAAAAAACCCTAATCCCCACCCCGACAATATTACCCATCCTGAGGCCCACCACAATCAACCTAACTCAAAAAGCCCACTTCAGCCTGTTGGCCCACCAAAACCTCTCCCCAATCCTCATAAACCTCTTATCTTCCCCGAACTAGAAGTCACATCTGGGATCCACATCCCAACTAGCCCGCCACCAAGTGACCCAATCCCAACAAAAAATACCCTACATGGTCGAAAGAAGCCCATCACTATCAATAATAAGAAACCTATCTCTTAA MRDLQQHLSAYASISPPPQPDKALLACEDEEQARVLTKIKGWYKVGKYQLRFYPWNSDVISREQKVPSYGGWIKARNLPLDKWSFEVFKMIGDECGGYVETATKTLTRLDMMEIMIKVKPNRTGFIPAKVHIPSSSSSPIKVSIDPFFMEEYYIGYLAGIHGRIPTELAKSDEARTEDVAYQGNSKPRATLAKINENGEYPQISYQCPSQRDPSEACQTEEFQTRSVWVPRQPIDHVIPQSQKTITTSIKNPNPHPDNITHPEAHHNQPNSKSPLQPVGPPKPLPNPHKPLIFPELEVTSGIHIPTSPPPSDPIPTKNTLHGRKKPITINNKKPIS Homology
BLAST of Lag0011943 vs. NCBI nr
Match: QWT43305.1 (kinesin-related protein KIN7C [Citrullus lanatus subsp. vulgaris]) HSP 1 Score: 126.3 bits (316), Expect = 4.9e-25 Identity = 53/103 (51.46%), Postives = 77/103 (74.76%), Query Frame = 0
BLAST of Lag0011943 vs. NCBI nr
Match: KAA0050054.1 (hypothetical protein E6C27_scaffold675G00340 [Cucumis melo var. makuwa]) HSP 1 Score: 125.6 bits (314), Expect = 8.3e-25 Identity = 57/154 (37.01%), Postives = 87/154 (56.49%), Query Frame = 0
BLAST of Lag0011943 vs. NCBI nr
Match: TYK10355.1 (hypothetical protein E5676_scaffold367G00330 [Cucumis melo var. makuwa]) HSP 1 Score: 125.6 bits (314), Expect = 8.3e-25 Identity = 57/154 (37.01%), Postives = 87/154 (56.49%), Query Frame = 0
BLAST of Lag0011943 vs. NCBI nr
Match: KAA0040039.1 (hypothetical protein E6C27_scaffold366G00060 [Cucumis melo var. makuwa]) HSP 1 Score: 125.2 bits (313), Expect = 1.1e-24 Identity = 61/154 (39.61%), Postives = 86/154 (55.84%), Query Frame = 0
BLAST of Lag0011943 vs. NCBI nr
Match: KAA0039967.1 (hypothetical protein E6C27_scaffold122G002490 [Cucumis melo var. makuwa]) HSP 1 Score: 124.0 bits (310), Expect = 2.4e-24 Identity = 60/154 (38.96%), Postives = 87/154 (56.49%), Query Frame = 0
BLAST of Lag0011943 vs. ExPASy TrEMBL
Match: A0A5A7U495 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00340 PE=4 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 4.0e-25 Identity = 57/154 (37.01%), Postives = 87/154 (56.49%), Query Frame = 0
BLAST of Lag0011943 vs. ExPASy TrEMBL
Match: A0A5D3CFS8 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00330 PE=4 SV=1) HSP 1 Score: 125.6 bits (314), Expect = 4.0e-25 Identity = 57/154 (37.01%), Postives = 87/154 (56.49%), Query Frame = 0
BLAST of Lag0011943 vs. ExPASy TrEMBL
Match: A0A5A7TFK7 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold366G00060 PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 5.3e-25 Identity = 61/154 (39.61%), Postives = 86/154 (55.84%), Query Frame = 0
BLAST of Lag0011943 vs. ExPASy TrEMBL
Match: A0A5A7TEK8 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G002490 PE=4 SV=1) HSP 1 Score: 124.0 bits (310), Expect = 1.2e-24 Identity = 60/154 (38.96%), Postives = 87/154 (56.49%), Query Frame = 0
BLAST of Lag0011943 vs. ExPASy TrEMBL
Match: A0A5D3DLP0 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00770 PE=4 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 1.5e-24 Identity = 60/154 (38.96%), Postives = 86/154 (55.84%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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