Lag0011943 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0011943
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionDUF4283 domain-containing protein
Locationchr1: 35229559 .. 35230569 (-)
RNA-Seq ExpressionLag0011943
SyntenyLag0011943
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAGATCTTCAACAGCACCTATCAGCATATGCCTCTATCAGCCCCCCCCCCCAACCGGATAAAGCTTTACTAGCTTGCGAAGATGAGGAACAAGCTCGAGTCCTAACAAAAATCAAAGGATGGTACAAGGTTGGAAAATATCAGCTTAGATTCTACCCTTGGAACTCTGATGTCATAAGCCGAGAACAAAAGGTTCCTTCATATGGGGGATGGATAAAGGCCCGCAATCTTCCTCTAGACAAATGGTCCTTTGAAGTTTTTAAAATGATCGGAGATGAATGTGGTGGTTATGTGGAAACAGCTACAAAGACCCTTACTCGACTGGATATGATGGAGATTATGATTAAAGTGAAACCCAATCGCACAGGCTTTATCCCAGCTAAGGTGCATATTCCGTCATCATCAAGCAGCCCTATTAAGGTCAGTATCGACCCATTCTTTATGGAGGAATATTATATAGGATATCTTGCCGGAATCCATGGCAGAATCCCAACAGAGTTGGCGAAATCAGATGAAGCTCGCACAGAAGATGTCGCTTACCAAGGAAATTCAAAGCCACGCGCCACCCTTGCGAAGATTAATGAAAATGGGGAATATCCCCAGATATCGTACCAGTGCCCATCCCAAAGAGACCCCTCTGAAGCTTGTCAAACAGAAGAATTTCAGACGCGATCAGTCTGGGTCCCACGGCAACCGATTGACCATGTGATCCCCCAATCCCAAAAAACCATCACCACCAGCATAAAAAACCCTAATCCCCACCCCGACAATATTACCCATCCTGAGGCCCACCACAATCAACCTAACTCAAAAAGCCCACTTCAGCCTGTTGGCCCACCAAAACCTCTCCCCAATCCTCATAAACCTCTTATCTTCCCCGAACTAGAAGTCACATCTGGGATCCACATCCCAACTAGCCCGCCACCAAGTGACCCAATCCCAACAAAAAATACCCTACATGGTCGAAAGAAGCCCATCACTATCAATAATAAGAAACCTATCTCTTAA

mRNA sequence

ATGAGAGATCTTCAACAGCACCTATCAGCATATGCCTCTATCAGCCCCCCCCCCCAACCGGATAAAGCTTTACTAGCTTGCGAAGATGAGGAACAAGCTCGAGTCCTAACAAAAATCAAAGGATGGTACAAGGTTGGAAAATATCAGCTTAGATTCTACCCTTGGAACTCTGATGTCATAAGCCGAGAACAAAAGGTTCCTTCATATGGGGGATGGATAAAGGCCCGCAATCTTCCTCTAGACAAATGGTCCTTTGAAGTTTTTAAAATGATCGGAGATGAATGTGGTGGTTATGTGGAAACAGCTACAAAGACCCTTACTCGACTGGATATGATGGAGATTATGATTAAAGTGAAACCCAATCGCACAGGCTTTATCCCAGCTAAGGTGCATATTCCGTCATCATCAAGCAGCCCTATTAAGGTCAGTATCGACCCATTCTTTATGGAGGAATATTATATAGGATATCTTGCCGGAATCCATGGCAGAATCCCAACAGAGTTGGCGAAATCAGATGAAGCTCGCACAGAAGATGTCGCTTACCAAGGAAATTCAAAGCCACGCGCCACCCTTGCGAAGATTAATGAAAATGGGGAATATCCCCAGATATCGTACCAGTGCCCATCCCAAAGAGACCCCTCTGAAGCTTGTCAAACAGAAGAATTTCAGACGCGATCAGTCTGGGTCCCACGGCAACCGATTGACCATGTGATCCCCCAATCCCAAAAAACCATCACCACCAGCATAAAAAACCCTAATCCCCACCCCGACAATATTACCCATCCTGAGGCCCACCACAATCAACCTAACTCAAAAAGCCCACTTCAGCCTGTTGGCCCACCAAAACCTCTCCCCAATCCTCATAAACCTCTTATCTTCCCCGAACTAGAAGTCACATCTGGGATCCACATCCCAACTAGCCCGCCACCAAGTGACCCAATCCCAACAAAAAATACCCTACATGGTCGAAAGAAGCCCATCACTATCAATAATAAGAAACCTATCTCTTAA

Coding sequence (CDS)

ATGAGAGATCTTCAACAGCACCTATCAGCATATGCCTCTATCAGCCCCCCCCCCCAACCGGATAAAGCTTTACTAGCTTGCGAAGATGAGGAACAAGCTCGAGTCCTAACAAAAATCAAAGGATGGTACAAGGTTGGAAAATATCAGCTTAGATTCTACCCTTGGAACTCTGATGTCATAAGCCGAGAACAAAAGGTTCCTTCATATGGGGGATGGATAAAGGCCCGCAATCTTCCTCTAGACAAATGGTCCTTTGAAGTTTTTAAAATGATCGGAGATGAATGTGGTGGTTATGTGGAAACAGCTACAAAGACCCTTACTCGACTGGATATGATGGAGATTATGATTAAAGTGAAACCCAATCGCACAGGCTTTATCCCAGCTAAGGTGCATATTCCGTCATCATCAAGCAGCCCTATTAAGGTCAGTATCGACCCATTCTTTATGGAGGAATATTATATAGGATATCTTGCCGGAATCCATGGCAGAATCCCAACAGAGTTGGCGAAATCAGATGAAGCTCGCACAGAAGATGTCGCTTACCAAGGAAATTCAAAGCCACGCGCCACCCTTGCGAAGATTAATGAAAATGGGGAATATCCCCAGATATCGTACCAGTGCCCATCCCAAAGAGACCCCTCTGAAGCTTGTCAAACAGAAGAATTTCAGACGCGATCAGTCTGGGTCCCACGGCAACCGATTGACCATGTGATCCCCCAATCCCAAAAAACCATCACCACCAGCATAAAAAACCCTAATCCCCACCCCGACAATATTACCCATCCTGAGGCCCACCACAATCAACCTAACTCAAAAAGCCCACTTCAGCCTGTTGGCCCACCAAAACCTCTCCCCAATCCTCATAAACCTCTTATCTTCCCCGAACTAGAAGTCACATCTGGGATCCACATCCCAACTAGCCCGCCACCAAGTGACCCAATCCCAACAAAAAATACCCTACATGGTCGAAAGAAGCCCATCACTATCAATAATAAGAAACCTATCTCTTAA

Protein sequence

MRDLQQHLSAYASISPPPQPDKALLACEDEEQARVLTKIKGWYKVGKYQLRFYPWNSDVISREQKVPSYGGWIKARNLPLDKWSFEVFKMIGDECGGYVETATKTLTRLDMMEIMIKVKPNRTGFIPAKVHIPSSSSSPIKVSIDPFFMEEYYIGYLAGIHGRIPTELAKSDEARTEDVAYQGNSKPRATLAKINENGEYPQISYQCPSQRDPSEACQTEEFQTRSVWVPRQPIDHVIPQSQKTITTSIKNPNPHPDNITHPEAHHNQPNSKSPLQPVGPPKPLPNPHKPLIFPELEVTSGIHIPTSPPPSDPIPTKNTLHGRKKPITINNKKPIS
Homology
BLAST of Lag0011943 vs. NCBI nr
Match: QWT43305.1 (kinesin-related protein KIN7C [Citrullus lanatus subsp. vulgaris])

HSP 1 Score: 126.3 bits (316), Expect = 4.9e-25
Identity = 53/103 (51.46%), Postives = 77/103 (74.76%), Query Frame = 0

Query: 60  ISREQKVPSYGGWIKARNLPLDKWSFEVFKMIGDECGGYVETATKTLTRLDMMEIMIKVK 119
           I  + +VPSYG WIK RNL +D+WS++ FK+IG+ CGGY+ET+ KTL R+DMME  +KVK
Sbjct: 234 IREDAQVPSYGSWIKIRNLLIDQWSYDTFKLIGELCGGYIETSKKTLARMDMMEASLKVK 293

Query: 120 PNRTGFIPAKVHIPSSSSSPIKVSIDPFFMEEYYIGYLAGIHG 163
            N+ GF+PA + + S+S+  + V +DPFF  + +IGY+A + G
Sbjct: 294 MNKNGFLPAIIQLLSTSAFSMAVQMDPFFDLDLHIGYIAAVMG 336

BLAST of Lag0011943 vs. NCBI nr
Match: KAA0050054.1 (hypothetical protein E6C27_scaffold675G00340 [Cucumis melo var. makuwa])

HSP 1 Score: 125.6 bits (314), Expect = 8.3e-25
Identity = 57/154 (37.01%), Postives = 87/154 (56.49%), Query Frame = 0

Query: 17  PPQPDKALLACEDEEQARVLTKIKGWYKVGKYQLRFYPWNSDVISREQKVPSYGGWIKAR 76
           P   DKAL+  ++EEQA ++ K KGW  VG++ ++F  WN    +  + +PSYGGWIK R
Sbjct: 271 PFHADKALICFKNEEQANLICKNKGWTTVGRFYVKFEEWNQKAHASPKVIPSYGGWIKVR 330

Query: 77  NLPLDKWSFEVFKMIGDECGGYVETATKTLTRLDMMEIMIKVKPNRTGFIPAKVHIPSSS 136
            +PL  W+ E F  IGD CGG++E A +T    D++E  I++K N +GFIPA + +    
Sbjct: 331 GVPLHAWNLESFTQIGDACGGFIEVAKETRELTDIIEASIRIKDNYSGFIPAFIKLFDKE 390

Query: 137 SSPIKVSIDPFFMEEYYIGYLAGIHGRIPTELAK 171
                + +      ++++     IHG    E AK
Sbjct: 391 EHSFIIQVIVKTEGKWHLERSPSIHGTFTREAAK 424

BLAST of Lag0011943 vs. NCBI nr
Match: TYK10355.1 (hypothetical protein E5676_scaffold367G00330 [Cucumis melo var. makuwa])

HSP 1 Score: 125.6 bits (314), Expect = 8.3e-25
Identity = 57/154 (37.01%), Postives = 87/154 (56.49%), Query Frame = 0

Query: 17  PPQPDKALLACEDEEQARVLTKIKGWYKVGKYQLRFYPWNSDVISREQKVPSYGGWIKAR 76
           P   DKAL+  ++EEQA ++ K KGW  VG++ ++F  WN    +  + +PSYGGWIK R
Sbjct: 323 PFHADKALICFKNEEQANLICKNKGWTTVGRFYVKFEEWNQKAHASPKVIPSYGGWIKVR 382

Query: 77  NLPLDKWSFEVFKMIGDECGGYVETATKTLTRLDMMEIMIKVKPNRTGFIPAKVHIPSSS 136
            +PL  W+ E F  IGD CGG++E A +T    D++E  I++K N +GFIPA + +    
Sbjct: 383 GVPLHAWNLESFTQIGDACGGFIEVAKETRELTDIIEASIRIKDNYSGFIPAFIKLFDKE 442

Query: 137 SSPIKVSIDPFFMEEYYIGYLAGIHGRIPTELAK 171
                + +      ++++     IHG    E AK
Sbjct: 443 EHSFIIQVIVKTEGKWHLERSPSIHGTFTREAAK 476

BLAST of Lag0011943 vs. NCBI nr
Match: KAA0040039.1 (hypothetical protein E6C27_scaffold366G00060 [Cucumis melo var. makuwa])

HSP 1 Score: 125.2 bits (313), Expect = 1.1e-24
Identity = 61/154 (39.61%), Postives = 86/154 (55.84%), Query Frame = 0

Query: 17  PPQPDKALLACEDEEQARVLTKIKGWYKVGKYQLRFYPWNSDVISREQKVPSYGGWIKAR 76
           P   DKAL+  ++EEQA++L K KGW  VG++ ++F  W+    +  + +PSYGGWIK R
Sbjct: 233 PFHADKALIYFKNEEQAKLLCKNKGWTTVGRFYVKFEEWSQKTHASPKVIPSYGGWIKVR 292

Query: 77  NLPLDKWSFEVFKMIGDECGGYVETATKTLTRLDMMEIMIKVKPNRTGFIPAKVHIPSSS 136
            +PL  W+ E F  IGD CGG+VE A +T    D+ E  IK+K N TGFIPA + +    
Sbjct: 293 GVPLHAWNLESFIQIGDACGGFVEVAKETRELTDIFEASIKIKDNYTGFIPAYIKLFDKE 352

Query: 137 SSPIKVSIDPFFMEEYYIGYLAGIHGRIPTELAK 171
                V +      +++      IHG    E AK
Sbjct: 353 EHSFIVQVIVKTEGKWHRERSPSIHGTFTREAAK 386

BLAST of Lag0011943 vs. NCBI nr
Match: KAA0039967.1 (hypothetical protein E6C27_scaffold122G002490 [Cucumis melo var. makuwa])

HSP 1 Score: 124.0 bits (310), Expect = 2.4e-24
Identity = 60/154 (38.96%), Postives = 87/154 (56.49%), Query Frame = 0

Query: 17  PPQPDKALLACEDEEQARVLTKIKGWYKVGKYQLRFYPWNSDVISREQKVPSYGGWIKAR 76
           P + DKAL+  ++EEQA++L K KGW  VG++ ++F  W+    +  + +PSYGGWIK R
Sbjct: 217 PFRADKALIYFKNEEQAKLLCKNKGWTTVGRFYVKFEEWSQKTHASPKVIPSYGGWIKVR 276

Query: 77  NLPLDKWSFEVFKMIGDECGGYVETATKTLTRLDMMEIMIKVKPNRTGFIPAKVHIPSSS 136
            +PL  W+ E F  IGD CGG+VE A +T    D+ E  IK+K N +GFIPA + +    
Sbjct: 277 GVPLHAWNLESFIQIGDACGGFVEVAKETRELTDIFEASIKIKDNYSGFIPAYIKLFDKE 336

Query: 137 SSPIKVSIDPFFMEEYYIGYLAGIHGRIPTELAK 171
                V +      +++      IHG    E AK
Sbjct: 337 EHSFIVQVIVKTEGKWHRERSPSIHGTFTREAAK 370

BLAST of Lag0011943 vs. ExPASy TrEMBL
Match: A0A5A7U495 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G00340 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 4.0e-25
Identity = 57/154 (37.01%), Postives = 87/154 (56.49%), Query Frame = 0

Query: 17  PPQPDKALLACEDEEQARVLTKIKGWYKVGKYQLRFYPWNSDVISREQKVPSYGGWIKAR 76
           P   DKAL+  ++EEQA ++ K KGW  VG++ ++F  WN    +  + +PSYGGWIK R
Sbjct: 271 PFHADKALICFKNEEQANLICKNKGWTTVGRFYVKFEEWNQKAHASPKVIPSYGGWIKVR 330

Query: 77  NLPLDKWSFEVFKMIGDECGGYVETATKTLTRLDMMEIMIKVKPNRTGFIPAKVHIPSSS 136
            +PL  W+ E F  IGD CGG++E A +T    D++E  I++K N +GFIPA + +    
Sbjct: 331 GVPLHAWNLESFTQIGDACGGFIEVAKETRELTDIIEASIRIKDNYSGFIPAFIKLFDKE 390

Query: 137 SSPIKVSIDPFFMEEYYIGYLAGIHGRIPTELAK 171
                + +      ++++     IHG    E AK
Sbjct: 391 EHSFIIQVIVKTEGKWHLERSPSIHGTFTREAAK 424

BLAST of Lag0011943 vs. ExPASy TrEMBL
Match: A0A5D3CFS8 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold367G00330 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 4.0e-25
Identity = 57/154 (37.01%), Postives = 87/154 (56.49%), Query Frame = 0

Query: 17  PPQPDKALLACEDEEQARVLTKIKGWYKVGKYQLRFYPWNSDVISREQKVPSYGGWIKAR 76
           P   DKAL+  ++EEQA ++ K KGW  VG++ ++F  WN    +  + +PSYGGWIK R
Sbjct: 323 PFHADKALICFKNEEQANLICKNKGWTTVGRFYVKFEEWNQKAHASPKVIPSYGGWIKVR 382

Query: 77  NLPLDKWSFEVFKMIGDECGGYVETATKTLTRLDMMEIMIKVKPNRTGFIPAKVHIPSSS 136
            +PL  W+ E F  IGD CGG++E A +T    D++E  I++K N +GFIPA + +    
Sbjct: 383 GVPLHAWNLESFTQIGDACGGFIEVAKETRELTDIIEASIRIKDNYSGFIPAFIKLFDKE 442

Query: 137 SSPIKVSIDPFFMEEYYIGYLAGIHGRIPTELAK 171
                + +      ++++     IHG    E AK
Sbjct: 443 EHSFIIQVIVKTEGKWHLERSPSIHGTFTREAAK 476

BLAST of Lag0011943 vs. ExPASy TrEMBL
Match: A0A5A7TFK7 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold366G00060 PE=4 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 5.3e-25
Identity = 61/154 (39.61%), Postives = 86/154 (55.84%), Query Frame = 0

Query: 17  PPQPDKALLACEDEEQARVLTKIKGWYKVGKYQLRFYPWNSDVISREQKVPSYGGWIKAR 76
           P   DKAL+  ++EEQA++L K KGW  VG++ ++F  W+    +  + +PSYGGWIK R
Sbjct: 233 PFHADKALIYFKNEEQAKLLCKNKGWTTVGRFYVKFEEWSQKTHASPKVIPSYGGWIKVR 292

Query: 77  NLPLDKWSFEVFKMIGDECGGYVETATKTLTRLDMMEIMIKVKPNRTGFIPAKVHIPSSS 136
            +PL  W+ E F  IGD CGG+VE A +T    D+ E  IK+K N TGFIPA + +    
Sbjct: 293 GVPLHAWNLESFIQIGDACGGFVEVAKETRELTDIFEASIKIKDNYTGFIPAYIKLFDKE 352

Query: 137 SSPIKVSIDPFFMEEYYIGYLAGIHGRIPTELAK 171
                V +      +++      IHG    E AK
Sbjct: 353 EHSFIVQVIVKTEGKWHRERSPSIHGTFTREAAK 386

BLAST of Lag0011943 vs. ExPASy TrEMBL
Match: A0A5A7TEK8 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G002490 PE=4 SV=1)

HSP 1 Score: 124.0 bits (310), Expect = 1.2e-24
Identity = 60/154 (38.96%), Postives = 87/154 (56.49%), Query Frame = 0

Query: 17  PPQPDKALLACEDEEQARVLTKIKGWYKVGKYQLRFYPWNSDVISREQKVPSYGGWIKAR 76
           P + DKAL+  ++EEQA++L K KGW  VG++ ++F  W+    +  + +PSYGGWIK R
Sbjct: 217 PFRADKALIYFKNEEQAKLLCKNKGWTTVGRFYVKFEEWSQKTHASPKVIPSYGGWIKVR 276

Query: 77  NLPLDKWSFEVFKMIGDECGGYVETATKTLTRLDMMEIMIKVKPNRTGFIPAKVHIPSSS 136
            +PL  W+ E F  IGD CGG+VE A +T    D+ E  IK+K N +GFIPA + +    
Sbjct: 277 GVPLHAWNLESFIQIGDACGGFVEVAKETRELTDIFEASIKIKDNYSGFIPAYIKLFDKE 336

Query: 137 SSPIKVSIDPFFMEEYYIGYLAGIHGRIPTELAK 171
                V +      +++      IHG    E AK
Sbjct: 337 EHSFIVQVIVKTEGKWHRERSPSIHGTFTREAAK 370

BLAST of Lag0011943 vs. ExPASy TrEMBL
Match: A0A5D3DLP0 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00770 PE=4 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 1.5e-24
Identity = 60/154 (38.96%), Postives = 86/154 (55.84%), Query Frame = 0

Query: 17  PPQPDKALLACEDEEQARVLTKIKGWYKVGKYQLRFYPWNSDVISREQKVPSYGGWIKAR 76
           P   DKAL+  ++EEQA++L K KGW  VG++ ++F  W+    +  + +PSYGGWIK R
Sbjct: 217 PFHADKALIYFKNEEQAKLLCKNKGWTTVGRFYVKFEEWSQKTHASPKVIPSYGGWIKVR 276

Query: 77  NLPLDKWSFEVFKMIGDECGGYVETATKTLTRLDMMEIMIKVKPNRTGFIPAKVHIPSSS 136
            +PL  W+ E F  IGD CGG+VE A +T    D+ E  IK+K N +GFIPA + +    
Sbjct: 277 GVPLHAWNLESFIQIGDACGGFVEVAKETRELTDIFEASIKIKDNYSGFIPAYIKLFDKE 336

Query: 137 SSPIKVSIDPFFMEEYYIGYLAGIHGRIPTELAK 171
                V +      +++      IHG    E AK
Sbjct: 337 EHSFIVQVIVKTEGKWHRERSPSIHGTFTREAAK 370

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
QWT43305.14.9e-2551.46kinesin-related protein KIN7C [Citrullus lanatus subsp. vulgaris][more]
KAA0050054.18.3e-2537.01hypothetical protein E6C27_scaffold675G00340 [Cucumis melo var. makuwa][more]
TYK10355.18.3e-2537.01hypothetical protein E5676_scaffold367G00330 [Cucumis melo var. makuwa][more]
KAA0040039.11.1e-2439.61hypothetical protein E6C27_scaffold366G00060 [Cucumis melo var. makuwa][more]
KAA0039967.12.4e-2438.96hypothetical protein E6C27_scaffold122G002490 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7U4954.0e-2537.01DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5D3CFS84.0e-2537.01DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
A0A5A7TFK75.3e-2539.61DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5A7TEK81.2e-2438.96DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... [more]
A0A5D3DLP01.5e-2438.96DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 40..112
e-value: 2.5E-10
score: 40.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 246..336
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 274..290
NoneNo IPR availablePANTHERPTHR34427:SF5DUF4283 DOMAIN PROTEINcoord: 30..256
NoneNo IPR availablePANTHERPTHR34427DUF4283 DOMAIN PROTEINcoord: 30..256

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0011943.1Lag0011943.1mRNA