Lag0011745 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0011745
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	40S ribosomal protein s2
Location	chr1: 32146262 .. 32147699 (+)
RNA-Seq Expression	Lag0011745
Synteny	Lag0011745

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGAAAGAGGAGGAGGAGACCGCGGTGGCTTCGGCAGAGGATTCGGTGGCAGAGGCCGTGGTGGTGACCGTGGCCGTGGCCGCCGTCGTGCAGGCCGACGTGACGAAGAGGAGAAGTGGGTTCCAGTCACCAAGCTGGGCCGCCTCGTCAAGGAAGGTAAGATTCAGTCACTGGAGCAGATTTACCTCCATTCTCTCCCAATCAAGGAGCACCAGATCGTCGATACTCTCATCGGCCCCAGCCTCAAGGATGAGGTTATGAAGATCATGCCGGTTCAGAAACAGACCCGGGCCGGGCAGAGGACTCGTTTCAAGGCCTTCGTTGTCGTCGGCGACGGTAATGGCCATGTCGGATTGGGAGTTAAGTGCAGCAAGGAGGTGGCGACTGCTATTCGTGGTTCGATTATATTGGCTAAGTTGTCGGTAATCCCTGTTAGGAGGGTTACTGGGGTAACAAGATCGGTAAGCCCCACACTGTGCCTTGCAAGGTCACTGGCAAGTGTGGTTCTGTTACCGTGCGTATGGTCCCTGCCCCTCGTGGTGCTGGGATTGTGGCTGCTAGGGTTCCCAAGAAGGTGCTTCAATTCGCTGGTATTGAGGATGTTTTCACTTCATCCAGGGGTTCGACTAAGACACTCGGAAACTTTGTGAAGGTATATTATAATACGACGCAATATCTATATCATCTGTTCTGTTATATATATGGTTGAAATTTATGGTGTCCATTATTAGAATATCTTGTTTGCTTCCACTGCTTTGTGATTCAGATTAGTATTAAGTAGTCTATTGGTGGTTCTTTTGTGATTCTTATCATTGTTTGCATAACTTTATGATTATAAAGTGGAATTGATTGTGTTTTTTTATTAAGCGTGCCACTTCTATGATTGTCGAATGTAAGATGGTTTAGCCTGGAATGATGATGTTTATAACAGAGTACTAGATTGGCTTTTGTGAGATTGTAGTGTGGGTGACGATTTGTTTATGCCTAATCGTTATCAAGTAATTGGATTGGATTCATGTGTGGGGGTTATTTGAGGTTTTTTCAATGTTTTCATTAGTGCTTATATTAGAGAACACATATTTCTTATGATTAGACGACATGGAATGAATTTCTTGTGAAATTCTGTGCACTTATATGGTGCGTGAAGATGTGCATTTAACTGATTTTTTTATGTGCATTGCTATTTTATAATGTTGAACTAGTGTTTCAATCTGTTTGTTTGAAGTTGAAGATTGGACTTTTCTGTCGTTACAAGTTTTCCCATTTTGGCAGGCTACCTTTGATTGTCTATTGAAAACCTATGGTTTCCTCACTCCTGAGTTCTGGAGGGAGACCCGCTTCACAAAATCTCCATTCCAAGAGCACACCGATCTGTTGGCTAAACCGACTGTGAAGGCATTGTTGTTGGATGATGCTGAGAGGGTCAATGCTTAA

mRNA sequence

ATGGCTGAAAGAGGAGGAGGAGACCGCGGTGGCTTCGGCAGAGGATTCGGTGGCAGAGGCCGTGGTGGTGACCGTGGCCGTGGCCGCCGTCGTGCAGGCCGACGTGACGAAGAGGAGAAGTGGGTTCCAGTCACCAAGCTGGGCCGCCTCGTCAAGGAAGGTAAGATTCAGTCACTGGAGCAGATTTACCTCCATTCTCTCCCAATCAAGGAGCACCAGATCGTCGATACTCTCATCGGCCCCAGCCTCAAGGATGAGGTTATGAAGATCATGCCGGTTCAGAAACAGACCCGGGCCGGGCAGAGGACTCGTTTCAAGGCCTTCGTTGTCGTCGGCGACGGTAATGGCCATGTCGGATTGGGAGTTAAGTGCAGCAAGGAGGTGGCGACTGCTATTCGTGGTTCGATTATATTGGCTAAGTTGTCGGTCACTGGCAAGTGTGGTTCTGTTACCGTGCGTATGGTCCCTGCCCCTCGTGGTGCTGGGATTGTGGCTGCTAGGGTTCCCAAGAAGGTGCTTCAATTCGCTGGTATTGAGGATGTTTTCACTTCATCCAGGGGTTCGACTAAGACACTCGGAAACTTTGTGAAGGCTACCTTTGATTGTCTATTGAAAACCTATGGTTTCCTCACTCCTGAGTTCTGGAGGGAGACCCGCTTCACAAAATCTCCATTCCAAGAGCACACCGATCTGTTGGCTAAACCGACTGTGAAGGCATTGTTGTTGGATGATGCTGAGAGGGTCAATGCTTAA

Coding sequence (CDS)

ATGGCTGAAAGAGGAGGAGGAGACCGCGGTGGCTTCGGCAGAGGATTCGGTGGCAGAGGCCGTGGTGGTGACCGTGGCCGTGGCCGCCGTCGTGCAGGCCGACGTGACGAAGAGGAGAAGTGGGTTCCAGTCACCAAGCTGGGCCGCCTCGTCAAGGAAGGTAAGATTCAGTCACTGGAGCAGATTTACCTCCATTCTCTCCCAATCAAGGAGCACCAGATCGTCGATACTCTCATCGGCCCCAGCCTCAAGGATGAGGTTATGAAGATCATGCCGGTTCAGAAACAGACCCGGGCCGGGCAGAGGACTCGTTTCAAGGCCTTCGTTGTCGTCGGCGACGGTAATGGCCATGTCGGATTGGGAGTTAAGTGCAGCAAGGAGGTGGCGACTGCTATTCGTGGTTCGATTATATTGGCTAAGTTGTCGGTCACTGGCAAGTGTGGTTCTGTTACCGTGCGTATGGTCCCTGCCCCTCGTGGTGCTGGGATTGTGGCTGCTAGGGTTCCCAAGAAGGTGCTTCAATTCGCTGGTATTGAGGATGTTTTCACTTCATCCAGGGGTTCGACTAAGACACTCGGAAACTTTGTGAAGGCTACCTTTGATTGTCTATTGAAAACCTATGGTTTCCTCACTCCTGAGTTCTGGAGGGAGACCCGCTTCACAAAATCTCCATTCCAAGAGCACACCGATCTGTTGGCTAAACCGACTGTGAAGGCATTGTTGTTGGATGATGCTGAGAGGGTCAATGCTTAA

Protein sequence

MAERGGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLSVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFTKSPFQEHTDLLAKPTVKALLLDDAERVNA

Homology

[Close]

BLAST of Lag0011745 vs. NCBI nr
Match: XP_022925174.1 (40S ribosomal protein S2-4-like [Cucurbita moschata] >KAG6595664.1 40S ribosomal protein S2-4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7027622.1 40S ribosomal protein S2-4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 464.5 bits (1194), Expect = 5.6e-127
Identity = 248/272 (91.18%), Postives = 250/272 (91.91%), Query Frame = 0


Query: 1   MAERGGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE 60
           MAERGGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE
Sbjct: 1   MAERGGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE 60

Query: 61  QIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL 120
           QIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL
Sbjct: 61  QIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL 120

Query: 121 GVKCSKEVATAIRGSIILAKLS----------------------VTGKCGSVTVRMVPAP 180
           GVKCSKEVATAIRGSIILAKLS                      VTGKCGSVTVRMVPAP
Sbjct: 121 GVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAP 180

Query: 181 RGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRET 240
           RGAGIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFW+ET
Sbjct: 181 RGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWKET 240

Query: 241 RFTKSPFQEHTDLLAKPTVKALLLDDAERVNA 251
           RFTKSPFQEHTDLLAKPTVKALLLDDAERVNA
Sbjct: 241 RFTKSPFQEHTDLLAKPTVKALLLDDAERVNA 272

[Close]

BLAST of Lag0011745 vs. NCBI nr
Match: XP_022966425.1 (40S ribosomal protein S2-4-like [Cucurbita maxima])

HSP 1 Score: 463.0 bits (1190), Expect = 1.6e-126
Identity = 247/271 (91.14%), Postives = 249/271 (91.88%), Query Frame = 0


Query: 1   MAERGGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE 60
           MAERGGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE
Sbjct: 1   MAERGGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE 60

Query: 61  QIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL 120
           QIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL
Sbjct: 61  QIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL 120

Query: 121 GVKCSKEVATAIRGSIILAKLS----------------------VTGKCGSVTVRMVPAP 180
           GVKCSKEVATAIRGSIILAKLS                      VTGKCGSVTVRMVPAP
Sbjct: 121 GVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAP 180

Query: 181 RGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRET 240
           RGAGIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFW+ET
Sbjct: 181 RGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWKET 240

Query: 241 RFTKSPFQEHTDLLAKPTVKALLLDDAERVN 250
           RFTKSPFQEHTDLLAKPTVKALLLDDAERVN
Sbjct: 241 RFTKSPFQEHTDLLAKPTVKALLLDDAERVN 271

[Close]

BLAST of Lag0011745 vs. NCBI nr
Match: XP_022928633.1 (40S ribosomal protein S2-4-like [Cucurbita moschata] >XP_022967881.1 40S ribosomal protein S2-4-like [Cucurbita maxima] >XP_023518394.1 40S ribosomal protein S2-4-like [Cucurbita pepo subsp. pepo] >XP_023544834.1 40S ribosomal protein S2-4-like [Cucurbita pepo subsp. pepo] >KAG6603223.1 40S ribosomal protein S2-4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033531.1 40S ribosomal protein S2-4 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 458.8 bits (1179), Expect = 3.1e-125
Identity = 247/272 (90.81%), Postives = 249/272 (91.54%), Query Frame = 0


Query: 1   MAERGGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE 60
           MAER GGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE
Sbjct: 1   MAER-GGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE 60

Query: 61  QIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL 120
           QIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL
Sbjct: 61  QIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL 120

Query: 121 GVKCSKEVATAIRGSIILAKLS----------------------VTGKCGSVTVRMVPAP 180
           GVKCSKEVATAIRGSIILAKLS                      VTGKCGSVTVRMVPAP
Sbjct: 121 GVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAP 180

Query: 181 RGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRET 240
           RGAGIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFW+ET
Sbjct: 181 RGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWKET 240

Query: 241 RFTKSPFQEHTDLLAKPTVKALLLDDAERVNA 251
           RFTKSPFQEHTDLLAKPTVKALLLDDAERVNA
Sbjct: 241 RFTKSPFQEHTDLLAKPTVKALLLDDAERVNA 271

[Close]

BLAST of Lag0011745 vs. NCBI nr
Match: XP_008460763.1 (PREDICTED: 40S ribosomal protein S2-4-like [Cucumis melo] >KAA0056140.1 40S ribosomal protein S2-4-like [Cucumis melo var. makuwa] >TYK14145.1 40S ribosomal protein S2-4-like [Cucumis melo var. makuwa])

HSP 1 Score: 456.4 bits (1173), Expect = 1.5e-124
Identity = 247/272 (90.81%), Postives = 248/272 (91.18%), Query Frame = 0


Query: 1   MAERGGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE 60
           MAER GGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE
Sbjct: 1   MAER-GGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE 60

Query: 61  QIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL 120
           QIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL
Sbjct: 61  QIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL 120

Query: 121 GVKCSKEVATAIRGSIILAKLS----------------------VTGKCGSVTVRMVPAP 180
           GVKCSKEVATAIRGSIILAKLS                      VTGKCGSVTVRMVPAP
Sbjct: 121 GVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAP 180

Query: 181 RGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRET 240
           RGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRET
Sbjct: 181 RGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRET 240

Query: 241 RFTKSPFQEHTDLLAKPTVKALLLDDAERVNA 251
           RFTKSPFQEHTDLLAKPTVKALLL+DAERV A
Sbjct: 241 RFTKSPFQEHTDLLAKPTVKALLLEDAERVAA 271

[Close]

BLAST of Lag0011745 vs. NCBI nr
Match: XP_038882736.1 (40S ribosomal protein S2-4-like [Benincasa hispida])

HSP 1 Score: 455.7 bits (1171), Expect = 2.6e-124
Identity = 245/271 (90.41%), Postives = 247/271 (91.14%), Query Frame = 0


Query: 1   MAERGGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE 60
           MAER GGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE
Sbjct: 1   MAER-GGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE 60

Query: 61  QIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL 120
           QIYLHSLPIKEHQIVDTL+GPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL
Sbjct: 61  QIYLHSLPIKEHQIVDTLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL 120

Query: 121 GVKCSKEVATAIRGSIILAKLS----------------------VTGKCGSVTVRMVPAP 180
           GVKCSKEVATAIRGSIILAKLS                      VTGKCGSVTVRMVPAP
Sbjct: 121 GVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAP 180

Query: 181 RGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRET 240
           RGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRET
Sbjct: 181 RGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRET 240

Query: 241 RFTKSPFQEHTDLLAKPTVKALLLDDAERVN 250
           RFTKSPFQEHTDLLAKPTVKALLL+D ERVN
Sbjct: 241 RFTKSPFQEHTDLLAKPTVKALLLEDPERVN 270

[Close]

BLAST of Lag0011745 vs. ExPASy Swiss-Prot
Match: Q9SCM3 (40S ribosomal protein S2-4 OS=Arabidopsis thaliana OX=3702 GN=RPS2D PE=2 SV=1)

HSP 1 Score: 384.0 bits (985), Expect = 1.3e-105
Identity = 213/266 (80.08%), Postives = 225/266 (84.59%), Query Frame = 0


Query: 1   MAERG---GGDRGGFGRGFGGR--GRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGK 60
           MAERG   GGDRG FGRGFGGR  GRGG RGRG RRAGR  EEEKWVPVTKLGRLVKEGK
Sbjct: 1   MAERGVERGGDRGDFGRGFGGRGGGRGGPRGRG-RRAGRAPEEEKWVPVTKLGRLVKEGK 60

Query: 61  IQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGN 120
           I  +EQIYLHSLP+KE+QI+D L+GPSLKDEVMKIMPVQKQTRAGQRTRFKAF+VVGD N
Sbjct: 61  ITKIEQIYLHSLPVKEYQIIDLLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFIVVGDSN 120

Query: 121 GHVGLGVKCSKEVATAIRGSIILAKLS----------------------VTGKCGSVTVR 180
           GHVGLGVKCSKEVATAIRG+IILAKLS                      VTGKCGSVTVR
Sbjct: 121 GHVGLGVKCSKEVATAIRGAIILAKLSVVPIRRGYWGNKIGKPHTVPCKVTGKCGSVTVR 180

Query: 181 MVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPE 239
           MVPAPRG+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPE
Sbjct: 181 MVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPE 240

[Close]

BLAST of Lag0011745 vs. ExPASy Swiss-Prot
Match: P49688 (40S ribosomal protein S2-3 OS=Arabidopsis thaliana OX=3702 GN=RPS2C PE=1 SV=2)

HSP 1 Score: 373.2 bits (957), Expect = 2.2e-102
Identity = 205/268 (76.49%), Postives = 219/268 (81.72%), Query Frame = 0


Query: 1   MAERG-------GGDRGGFGRGFGGRGRGGDR------GRGRRRAGRRDEEEKWVPVTKL 60
           MAERG       GG+RG FGRGFGGRG  GDR      GRG RR GR  EEEKWVPVTKL
Sbjct: 1   MAERGGERGVERGGERGDFGRGFGGRGGRGDRGGRGRGGRGGRRGGRASEEEKWVPVTKL 60

Query: 61  GRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKA 120
           GRLV  G I+ +EQIYLHSLP+KE+QI+D LIGP+LKDEVMKIMPVQKQTRAGQRTRFKA
Sbjct: 61  GRLVAAGHIKQIEQIYLHSLPVKEYQIIDMLIGPTLKDEVMKIMPVQKQTRAGQRTRFKA 120

Query: 121 FVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLS----------------------VTG 180
           FVVVGDGNGHVGLGVKCSKEVATAIRG+IILAKLS                      VTG
Sbjct: 121 FVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTG 180

Query: 181 KCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLK 234
           KCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCL K
Sbjct: 181 KCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQK 240

[Close]

BLAST of Lag0011745 vs. ExPASy Swiss-Prot
Match: Q8L8Y0 (40S ribosomal protein S2-1 OS=Arabidopsis thaliana OX=3702 GN=RPS2A PE=2 SV=2)

HSP 1 Score: 370.9 bits (951), Expect = 1.1e-101
Identity = 206/274 (75.18%), Postives = 220/274 (80.29%), Query Frame = 0


Query: 1   MAERG-------GGDRGGFGRGFGGRGRGGDRGRGR------RRAGRRDEEEKWVPVTKL 60
           MAERG       GGDRG FGRGFGG GRGG RGR R      RR GR  EE KWVPVTKL
Sbjct: 1   MAERGGEGGAERGGDRGDFGRGFGG-GRGGGRGRDRGPRGRGRRGGRASEETKWVPVTKL 60

Query: 61  GRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKA 120
           GRLV + KI  LEQIYLHSLP+KE+QI+D L+GP+LKDEVMKIMPVQKQTRAGQRTRFKA
Sbjct: 61  GRLVADNKITKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKA 120

Query: 121 FVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLS----------------------VTG 180
           FVVVGDGNGHVGLGVKCSKEVATAIRG+IILAKLS                      VTG
Sbjct: 121 FVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTG 180

Query: 181 KCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLK 240
           KCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCL K
Sbjct: 181 KCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQK 240

[Close]

BLAST of Lag0011745 vs. ExPASy Swiss-Prot
Match: Q93VB8 (40S ribosomal protein S2-2 OS=Arabidopsis thaliana OX=3702 GN=RPS2B PE=2 SV=1)

HSP 1 Score: 370.9 bits (951), Expect = 1.1e-101
Identity = 206/274 (75.18%), Postives = 220/274 (80.29%), Query Frame = 0


Query: 1   MAERG-------GGDRGGFGRGFGGRGRGGDRGRGR------RRAGRRDEEEKWVPVTKL 60
           MAERG       GGDRG FGRGFGG GRGG RGR R      RR GR  EE KWVPVTKL
Sbjct: 1   MAERGGESGAERGGDRGDFGRGFGG-GRGGGRGRDRGPRGRGRRGGRASEETKWVPVTKL 60

Query: 61  GRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKA 120
           GRLV + KI  LEQIYLHSLP+KE+QI+D L+GP+LKDEVMKIMPVQKQTRAGQRTRFKA
Sbjct: 61  GRLVADNKITKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKA 120

Query: 121 FVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLS----------------------VTG 180
           FVVVGDGNGHVGLGVKCSKEVATAIRG+IILAKLS                      VTG
Sbjct: 121 FVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTG 180

Query: 181 KCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLK 240
           KCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCL K
Sbjct: 181 KCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQK 240

[Close]

BLAST of Lag0011745 vs. ExPASy Swiss-Prot
Match: P25444 (40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=1 SV=3)

HSP 1 Score: 305.4 bits (781), Expect = 5.7e-82
Identity = 167/253 (66.01%), Postives = 194/253 (76.68%), Query Frame = 0


Query: 6   GGDRGGFGRGFGGRGRGGDRGRGRRRAGR--RDEEEKWVPVTKLGRLVKEGKIQSLEQIY 65
           GG RGGFG G  GRGRG  RGRGR R  R  + E+++W+PVTKLGRLVK+ KI+SLE+IY
Sbjct: 23  GGFRGGFGSGLRGRGRGRGRGRGRGRGARGGKAEDKEWIPVTKLGRLVKDMKIKSLEEIY 82

Query: 66  LHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVK 125
           L SLPIKE +I+D  +G SLKDEV+KIMPVQKQTRAGQRTRFKAFV +GD NGHVGLGVK
Sbjct: 83  LFSLPIKESEIIDFFLGASLKDEVLKIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVK 142

Query: 126 CSKEVATAIRGSIILAKLS----------------------VTGKCGSVTVRMVPAPRGA 185
           CSKEVATAIRG+IILAKLS                      VTG+CGSV VR++PAPRG 
Sbjct: 143 CSKEVATAIRGAIILAKLSIVPVRRGYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGT 202

Query: 186 GIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRETRFT 235
           GIV+A VPKK+L  AGI+D +TS+RG T TLGNF KATFD + KTY +LTP+ W+ET FT
Sbjct: 203 GIVSAPVPKKLLMMAGIDDCYTSARGCTATLGNFAKATFDAISKTYSYLTPDLWKETVFT 262

[Close]

BLAST of Lag0011745 vs. ExPASy TrEMBL
Match: A0A6J1EBD7 (40S ribosomal protein S2-4-like OS=Cucurbita moschata OX=3662 GN=LOC111432496 PE=3 SV=1)

HSP 1 Score: 464.5 bits (1194), Expect = 2.7e-127
Identity = 248/272 (91.18%), Postives = 250/272 (91.91%), Query Frame = 0


Query: 1   MAERGGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE 60
           MAERGGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE
Sbjct: 1   MAERGGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE 60

Query: 61  QIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL 120
           QIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL
Sbjct: 61  QIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL 120

Query: 121 GVKCSKEVATAIRGSIILAKLS----------------------VTGKCGSVTVRMVPAP 180
           GVKCSKEVATAIRGSIILAKLS                      VTGKCGSVTVRMVPAP
Sbjct: 121 GVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAP 180

Query: 181 RGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRET 240
           RGAGIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFW+ET
Sbjct: 181 RGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWKET 240

Query: 241 RFTKSPFQEHTDLLAKPTVKALLLDDAERVNA 251
           RFTKSPFQEHTDLLAKPTVKALLLDDAERVNA
Sbjct: 241 RFTKSPFQEHTDLLAKPTVKALLLDDAERVNA 272

[Close]

BLAST of Lag0011745 vs. ExPASy TrEMBL
Match: A0A6J1HRL3 (40S ribosomal protein S2-4-like OS=Cucurbita maxima OX=3661 GN=LOC111466080 PE=3 SV=1)

HSP 1 Score: 463.0 bits (1190), Expect = 7.9e-127
Identity = 247/271 (91.14%), Postives = 249/271 (91.88%), Query Frame = 0


Query: 1   MAERGGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE 60
           MAERGGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE
Sbjct: 1   MAERGGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE 60

Query: 61  QIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL 120
           QIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL
Sbjct: 61  QIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL 120

Query: 121 GVKCSKEVATAIRGSIILAKLS----------------------VTGKCGSVTVRMVPAP 180
           GVKCSKEVATAIRGSIILAKLS                      VTGKCGSVTVRMVPAP
Sbjct: 121 GVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAP 180

Query: 181 RGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRET 240
           RGAGIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFW+ET
Sbjct: 181 RGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWKET 240

Query: 241 RFTKSPFQEHTDLLAKPTVKALLLDDAERVN 250
           RFTKSPFQEHTDLLAKPTVKALLLDDAERVN
Sbjct: 241 RFTKSPFQEHTDLLAKPTVKALLLDDAERVN 271

[Close]

BLAST of Lag0011745 vs. ExPASy TrEMBL
Match: A0A6J1HTA3 (40S ribosomal protein S2-4-like OS=Cucurbita maxima OX=3661 GN=LOC111467257 PE=3 SV=1)

HSP 1 Score: 458.8 bits (1179), Expect = 1.5e-125
Identity = 247/272 (90.81%), Postives = 249/272 (91.54%), Query Frame = 0


Query: 1   MAERGGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE 60
           MAER GGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE
Sbjct: 1   MAER-GGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE 60

Query: 61  QIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL 120
           QIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL
Sbjct: 61  QIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL 120

Query: 121 GVKCSKEVATAIRGSIILAKLS----------------------VTGKCGSVTVRMVPAP 180
           GVKCSKEVATAIRGSIILAKLS                      VTGKCGSVTVRMVPAP
Sbjct: 121 GVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAP 180

Query: 181 RGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRET 240
           RGAGIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFW+ET
Sbjct: 181 RGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWKET 240

Query: 241 RFTKSPFQEHTDLLAKPTVKALLLDDAERVNA 251
           RFTKSPFQEHTDLLAKPTVKALLLDDAERVNA
Sbjct: 241 RFTKSPFQEHTDLLAKPTVKALLLDDAERVNA 271

[Close]

BLAST of Lag0011745 vs. ExPASy TrEMBL
Match: A0A6J1EPL6 (40S ribosomal protein S2-4-like OS=Cucurbita moschata OX=3662 GN=LOC111435482 PE=3 SV=1)

HSP 1 Score: 458.8 bits (1179), Expect = 1.5e-125
Identity = 247/272 (90.81%), Postives = 249/272 (91.54%), Query Frame = 0


Query: 1   MAERGGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE 60
           MAER GGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE
Sbjct: 1   MAER-GGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE 60

Query: 61  QIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL 120
           QIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL
Sbjct: 61  QIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL 120

Query: 121 GVKCSKEVATAIRGSIILAKLS----------------------VTGKCGSVTVRMVPAP 180
           GVKCSKEVATAIRGSIILAKLS                      VTGKCGSVTVRMVPAP
Sbjct: 121 GVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAP 180

Query: 181 RGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRET 240
           RGAGIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFW+ET
Sbjct: 181 RGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWKET 240

Query: 241 RFTKSPFQEHTDLLAKPTVKALLLDDAERVNA 251
           RFTKSPFQEHTDLLAKPTVKALLLDDAERVNA
Sbjct: 241 RFTKSPFQEHTDLLAKPTVKALLLDDAERVNA 271

[Close]

BLAST of Lag0011745 vs. ExPASy TrEMBL
Match: A0A5A7ULX0 (40S ribosomal protein S2-4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold513G00150 PE=3 SV=1)

HSP 1 Score: 456.4 bits (1173), Expect = 7.4e-125
Identity = 247/272 (90.81%), Postives = 248/272 (91.18%), Query Frame = 0


Query: 1   MAERGGGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE 60
           MAER GGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE
Sbjct: 1   MAER-GGDRGGFGRGFGGRGRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGKIQSLE 60

Query: 61  QIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL 120
           QIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL
Sbjct: 61  QIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGL 120

Query: 121 GVKCSKEVATAIRGSIILAKLS----------------------VTGKCGSVTVRMVPAP 180
           GVKCSKEVATAIRGSIILAKLS                      VTGKCGSVTVRMVPAP
Sbjct: 121 GVKCSKEVATAIRGSIILAKLSVIPVRRGYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAP 180

Query: 181 RGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRET 240
           RGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRET
Sbjct: 181 RGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWRET 240

Query: 241 RFTKSPFQEHTDLLAKPTVKALLLDDAERVNA 251
           RFTKSPFQEHTDLLAKPTVKALLL+DAERV A
Sbjct: 241 RFTKSPFQEHTDLLAKPTVKALLLEDAERVAA 271

[Close]

BLAST of Lag0011745 vs. TAIR 10
Match: AT3G57490.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 384.0 bits (985), Expect = 9.0e-107
Identity = 213/266 (80.08%), Postives = 225/266 (84.59%), Query Frame = 0


Query: 1   MAERG---GGDRGGFGRGFGGR--GRGGDRGRGRRRAGRRDEEEKWVPVTKLGRLVKEGK 60
           MAERG   GGDRG FGRGFGGR  GRGG RGRG RRAGR  EEEKWVPVTKLGRLVKEGK
Sbjct: 1   MAERGVERGGDRGDFGRGFGGRGGGRGGPRGRG-RRAGRAPEEEKWVPVTKLGRLVKEGK 60

Query: 61  IQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKAFVVVGDGN 120
           I  +EQIYLHSLP+KE+QI+D L+GPSLKDEVMKIMPVQKQTRAGQRTRFKAF+VVGD N
Sbjct: 61  ITKIEQIYLHSLPVKEYQIIDLLVGPSLKDEVMKIMPVQKQTRAGQRTRFKAFIVVGDSN 120

Query: 121 GHVGLGVKCSKEVATAIRGSIILAKLS----------------------VTGKCGSVTVR 180
           GHVGLGVKCSKEVATAIRG+IILAKLS                      VTGKCGSVTVR
Sbjct: 121 GHVGLGVKCSKEVATAIRGAIILAKLSVVPIRRGYWGNKIGKPHTVPCKVTGKCGSVTVR 180

Query: 181 MVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPE 239
           MVPAPRG+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCL KTYGFLTPE
Sbjct: 181 MVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQKTYGFLTPE 240

[Close]

BLAST of Lag0011745 vs. TAIR 10
Match: AT2G41840.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 373.2 bits (957), Expect = 1.6e-103
Identity = 205/268 (76.49%), Postives = 219/268 (81.72%), Query Frame = 0


Query: 1   MAERG-------GGDRGGFGRGFGGRGRGGDR------GRGRRRAGRRDEEEKWVPVTKL 60
           MAERG       GG+RG FGRGFGGRG  GDR      GRG RR GR  EEEKWVPVTKL
Sbjct: 1   MAERGGERGVERGGERGDFGRGFGGRGGRGDRGGRGRGGRGGRRGGRASEEEKWVPVTKL 60

Query: 61  GRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKA 120
           GRLV  G I+ +EQIYLHSLP+KE+QI+D LIGP+LKDEVMKIMPVQKQTRAGQRTRFKA
Sbjct: 61  GRLVAAGHIKQIEQIYLHSLPVKEYQIIDMLIGPTLKDEVMKIMPVQKQTRAGQRTRFKA 120

Query: 121 FVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLS----------------------VTG 180
           FVVVGDGNGHVGLGVKCSKEVATAIRG+IILAKLS                      VTG
Sbjct: 121 FVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTG 180

Query: 181 KCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLK 234
           KCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCL K
Sbjct: 181 KCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQK 240

[Close]

BLAST of Lag0011745 vs. TAIR 10
Match: AT1G58983.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 370.9 bits (951), Expect = 7.9e-103
Identity = 206/274 (75.18%), Postives = 220/274 (80.29%), Query Frame = 0


Query: 1   MAERG-------GGDRGGFGRGFGGRGRGGDRGRGR------RRAGRRDEEEKWVPVTKL 60
           MAERG       GGDRG FGRGFGG GRGG RGR R      RR GR  EE KWVPVTKL
Sbjct: 1   MAERGGESGAERGGDRGDFGRGFGG-GRGGGRGRDRGPRGRGRRGGRASEETKWVPVTKL 60

Query: 61  GRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKA 120
           GRLV + KI  LEQIYLHSLP+KE+QI+D L+GP+LKDEVMKIMPVQKQTRAGQRTRFKA
Sbjct: 61  GRLVADNKITKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKA 120

Query: 121 FVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLS----------------------VTG 180
           FVVVGDGNGHVGLGVKCSKEVATAIRG+IILAKLS                      VTG
Sbjct: 121 FVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTG 180

Query: 181 KCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLK 240
           KCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCL K
Sbjct: 181 KCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQK 240

[Close]

BLAST of Lag0011745 vs. TAIR 10
Match: AT1G59359.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 370.9 bits (951), Expect = 7.9e-103
Identity = 206/274 (75.18%), Postives = 220/274 (80.29%), Query Frame = 0


Query: 1   MAERG-------GGDRGGFGRGFGGRGRGGDRGRGR------RRAGRRDEEEKWVPVTKL 60
           MAERG       GGDRG FGRGFGG GRGG RGR R      RR GR  EE KWVPVTKL
Sbjct: 1   MAERGGESGAERGGDRGDFGRGFGG-GRGGGRGRDRGPRGRGRRGGRASEETKWVPVTKL 60

Query: 61  GRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKA 120
           GRLV + KI  LEQIYLHSLP+KE+QI+D L+GP+LKDEVMKIMPVQKQTRAGQRTRFKA
Sbjct: 61  GRLVADNKITKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKA 120

Query: 121 FVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLS----------------------VTG 180
           FVVVGDGNGHVGLGVKCSKEVATAIRG+IILAKLS                      VTG
Sbjct: 121 FVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTG 180

Query: 181 KCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLK 240
           KCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCL K
Sbjct: 181 KCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQK 240

[Close]

BLAST of Lag0011745 vs. TAIR 10
Match: AT1G58380.1 (Ribosomal protein S5 family protein )

HSP 1 Score: 370.9 bits (951), Expect = 7.9e-103
Identity = 206/274 (75.18%), Postives = 220/274 (80.29%), Query Frame = 0


Query: 1   MAERG-------GGDRGGFGRGFGGRGRGGDRGRGR------RRAGRRDEEEKWVPVTKL 60
           MAERG       GGDRG FGRGFGG GRGG RGR R      RR GR  EE KWVPVTKL
Sbjct: 1   MAERGGEGGAERGGDRGDFGRGFGG-GRGGGRGRDRGPRGRGRRGGRASEETKWVPVTKL 60

Query: 61  GRLVKEGKIQSLEQIYLHSLPIKEHQIVDTLIGPSLKDEVMKIMPVQKQTRAGQRTRFKA 120
           GRLV + KI  LEQIYLHSLP+KE+QI+D L+GP+LKDEVMKIMPVQKQTRAGQRTRFKA
Sbjct: 61  GRLVADNKITKLEQIYLHSLPVKEYQIIDHLVGPTLKDEVMKIMPVQKQTRAGQRTRFKA 120

Query: 121 FVVVGDGNGHVGLGVKCSKEVATAIRGSIILAKLS----------------------VTG 180
           FVVVGDGNGHVGLGVKCSKEVATAIRG+IILAKLS                      VTG
Sbjct: 121 FVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRRGYWGNKIGKPHTVPCKVTG 180

Query: 181 KCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGNFVKATFDCLLK 240
           KCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGNFVKATFDCL K
Sbjct: 181 KCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLQK 240

The following BLAST results are available for this feature:

BLAST of Lag0011745 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022925174.1	5.6e-127	91.18	40S ribosomal protein S2-4-like [Cucurbita moschata] >KAG6595664.1 40S ribosomal...	[more]
XP_022966425.1	1.6e-126	91.14	40S ribosomal protein S2-4-like [Cucurbita maxima]	[more]
XP_022928633.1	3.1e-125	90.81	40S ribosomal protein S2-4-like [Cucurbita moschata] >XP_022967881.1 40S ribosom...	[more]
XP_008460763.1	1.5e-124	90.81	PREDICTED: 40S ribosomal protein S2-4-like [Cucumis melo] >KAA0056140.1 40S ribo...	[more]
XP_038882736.1	2.6e-124	90.41	40S ribosomal protein S2-4-like [Benincasa hispida]	[more]

BLAST of Lag0011745 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SCM3	1.3e-105	80.08	40S ribosomal protein S2-4 OS=Arabidopsis thaliana OX=3702 GN=RPS2D PE=2 SV=1	[more]
P49688	2.2e-102	76.49	40S ribosomal protein S2-3 OS=Arabidopsis thaliana OX=3702 GN=RPS2C PE=1 SV=2	[more]
Q8L8Y0	1.1e-101	75.18	40S ribosomal protein S2-1 OS=Arabidopsis thaliana OX=3702 GN=RPS2A PE=2 SV=2	[more]
Q93VB8	1.1e-101	75.18	40S ribosomal protein S2-2 OS=Arabidopsis thaliana OX=3702 GN=RPS2B PE=2 SV=1	[more]
P25444	5.7e-82	66.01	40S ribosomal protein S2 OS=Mus musculus OX=10090 GN=Rps2 PE=1 SV=3	[more]

BLAST of Lag0011745 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EBD7	2.7e-127	91.18	40S ribosomal protein S2-4-like OS=Cucurbita moschata OX=3662 GN=LOC111432496 PE...	[more]
A0A6J1HRL3	7.9e-127	91.14	40S ribosomal protein S2-4-like OS=Cucurbita maxima OX=3661 GN=LOC111466080 PE=3...	[more]
A0A6J1HTA3	1.5e-125	90.81	40S ribosomal protein S2-4-like OS=Cucurbita maxima OX=3661 GN=LOC111467257 PE=3...	[more]
A0A6J1EPL6	1.5e-125	90.81	40S ribosomal protein S2-4-like OS=Cucurbita moschata OX=3662 GN=LOC111435482 PE...	[more]
A0A5A7ULX0	7.4e-125	90.81	40S ribosomal protein S2-4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_...	[more]

BLAST of Lag0011745 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57490.1	9.0e-107	80.08	Ribosomal protein S5 family protein	[more]
AT2G41840.1	1.6e-103	76.49	Ribosomal protein S5 family protein	[more]
AT1G58983.1	7.9e-103	75.18	Ribosomal protein S5 family protein	[more]
AT1G59359.1	7.9e-103	75.18	Ribosomal protein S5 family protein	[more]
AT1G58380.1	7.9e-103	75.18	Ribosomal protein S5 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.160.20		coord: 40..141 e-value: 1.8E-54 score: 184.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..38
None	No IPR available	PANTHER	PTHR13718:SF101	40S RIBOSOMAL PROTEIN S2-1-RELATED	coord: 143..247
None	No IPR available	PANTHER	PTHR13718:SF101	40S RIBOSOMAL PROTEIN S2-1-RELATED	coord: 1..143
None	No IPR available	SUPERFAMILY	54768	dsRNA-binding domain-like	coord: 79..143
IPR013810	Ribosomal protein S5, N-terminal	PFAM	PF00333	Ribosomal_S5	coord: 83..143 e-value: 5.5E-28 score: 96.7
IPR013810	Ribosomal protein S5, N-terminal	PROSITE	PS50881	S5_DSRBD	coord: 83..146 score: 20.987751
IPR014721	Ribosomal protein S5 domain 2-type fold, subgroup	GENE3D	3.30.230.10		coord: 142..217 e-value: 1.3E-36 score: 126.6
IPR005324	Ribosomal protein S5, C-terminal	PFAM	PF03719	Ribosomal_S5_C	coord: 144..210 e-value: 7.5E-24 score: 83.0
IPR000851	Ribosomal protein S5	PANTHER	PTHR13718	RIBOSOMAL S SUBUNIT	coord: 1..143
IPR000851	Ribosomal protein S5	PANTHER	PTHR13718	RIBOSOMAL S SUBUNIT	coord: 143..247
IPR018192	Ribosomal protein S5, N-terminal, conserved site	PROSITE	PS00585	RIBOSOMAL_S5	coord: 100..132
IPR020568	Ribosomal protein S5 domain 2-type fold	SUPERFAMILY	54211	Ribosomal protein S5 domain 2-like	coord: 142..217

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0011745.1	Lag0011745.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022627	cytosolic small ribosomal subunit
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding