Lag0011596 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0011596
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionReverse transcriptase domain-containing protein
Locationchr1: 28711907 .. 28713094 (-)
RNA-Seq ExpressionLag0011596
SyntenyLag0011596
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTGGCAAAGTCCTGGTTTGGCATCACCGAGGAAAAGTTTCTGTAGTTTTTTTGCAGTTCCTGTCAATTTCTTTTATGGCGTTTGAAAATATGATGGAAAATTGGGAGAGATTCAGTCTCACCATTGAAGAGGACTCCACTGAAGTTGATGTGGATCGTCAGGCGGCACTGATTACTAGTCAATCTTTAGGCCTCATAGGCAAATTGCTTGCCCCTCGAATCATCTCGAGTGAGGTGATGCGACATACTTTCAAGTCGGCGTGGAACATCCCCAATGGCCTTATGGTGGGAAAATGGGATCAAATCTGTTTCTATTTACTTCAGGTCGGAAGCTGACCAATCTCGAGTGTTGTGTCAGGAGCCTTGGCTCTTTGACAAGTTCTTGCTCGTCCTTTCGAAACCTATCCCGATGGTGAAGCGTACTGCCATGGTTTTCCAATTTGCAACCTTTTGGGTGCATTTTTGTGATCTTCCAATGGACCTCTATAATCAGTCAATGGCGGAGAGATTGGGTAACGCGATTGGCCAGTTTCAAGAGTATGACAACGGGGGTCGAGGATATGGCTGGAAGGAGAGTCTTAGAGTTCGAGTCATCTTTACAGATATCATGCGCCCTTTTCGTCGAGGTATTAAGGTTCGACTCGATGATTCACTAGGAAGTGTTTGGTCTCCTATTAAGTATGAAAAGCTGCCGAAAATATGCTCGTATTGTGGCCGGATAAGACATGGGATGAGAGATTGCTCTTTCTCGTTGGTTGATGATGGTTCACCCTCACACCGGCAAGAGTACGGGATGTGGATGTCATTTTCTAGGCGTTCTTCACATGTTTTCCGTTTAGTAACCAATAGTTCTATGGGTTCTAATAGGATCATGTCGGAGGTTTCACCAAATCCGATTGGCAATCTGGTGAAGAGTCAAGAAAAAACGGCGGGACAGGAAGTGGGTCTGGATCATTAGCCACACTCACCGCCGATGACAGGTTCCGGTAGCCGGCTGATAAGACCAATTTGTTATACACTTGGATCTCCCAATTTGCTTATCTTAGTTGATTTCCTTGCGAAAAAATGCTTTAAAATGAGTATAATATGTCTATAGGTCCTCACCAGAGCTTTGGAAGCAATTCGGGGCTTAAACGAGCGAAACCGGAGCGTAAAATGACCATTCTACCCCTGGAGCCTCATTAG

mRNA sequence

ATGTGTGGCAAAGTCCTGGTTTGGCATCACCGAGGAAAAGTTTCTGTAGTTTTTTTGCAGTTCCTGTCAATTTCTTTTATGGCGTTTGAAAATATGATGGAAAATTGGGAGAGATTCAGTCTCACCATTGAAGAGGACTCCACTGAAGTTGATGTGGATCGTCAGGCGGCACTGATTACTAGTCAATCTTTAGGCCTCATAGGCAAATTGCTTGCCCCTCGAATCATCTCGAGTGAGGTGATGCGACATACTTTCAAGTCGGCGTGGAACATCCCCAATGGCCTTATGGAGCCTTGGCTCTTTGACAAGTTCTTGCTCGTCCTTTCGAAACCTATCCCGATGGTGAAGCGTACTGCCATGGTTTTCCAATTTGCAACCTTTTGGGTGCATTTTTGTGATCTTCCAATGGACCTCTATAATCAGTCAATGGCGGAGAGATTGGGTAACGCGATTGGCCAGTTTCAAGAGTATGACAACGGGGGTCGAGGATATGGCTGGAAGGAGAGTCTTAGAGTTCGAGTCATCTTTACAGATATCATGCGCCCTTTTCGTCGAGGTATTAAGGTTCGACTCGATGATTCACTAGGAAGTGTTTGGTCTCCTATTAAGTATGAAAAGCTGCCGAAAATATGCTCGTATTGTGGCCGGATAAGACATGGGATGAGAGATTGCTCTTTCTCGTTGGTTGATGATGGTTCACCCTCACACCGGCAAGAGTACGGGATGTGGATGTCATTTTCTAGGCGTTCTTCACATGTTTTCCGTTTAGTAACCAATAGTTCTATGGGTTCTAATAGGATCATGTCGGAGGTTTCACCAAATCCGATTGGCAATCTGGTGAAGAGTCAAGAAAAAACGGCGGGACAGGAAGTGGGTCCTCACCAGAGCTTTGGAAGCAATTCGGGGCTTAAACGAGCGAAACCGGAGCGTAAAATGACCATTCTACCCCTGGAGCCTCATTAG

Coding sequence (CDS)

ATGTGTGGCAAAGTCCTGGTTTGGCATCACCGAGGAAAAGTTTCTGTAGTTTTTTTGCAGTTCCTGTCAATTTCTTTTATGGCGTTTGAAAATATGATGGAAAATTGGGAGAGATTCAGTCTCACCATTGAAGAGGACTCCACTGAAGTTGATGTGGATCGTCAGGCGGCACTGATTACTAGTCAATCTTTAGGCCTCATAGGCAAATTGCTTGCCCCTCGAATCATCTCGAGTGAGGTGATGCGACATACTTTCAAGTCGGCGTGGAACATCCCCAATGGCCTTATGGAGCCTTGGCTCTTTGACAAGTTCTTGCTCGTCCTTTCGAAACCTATCCCGATGGTGAAGCGTACTGCCATGGTTTTCCAATTTGCAACCTTTTGGGTGCATTTTTGTGATCTTCCAATGGACCTCTATAATCAGTCAATGGCGGAGAGATTGGGTAACGCGATTGGCCAGTTTCAAGAGTATGACAACGGGGGTCGAGGATATGGCTGGAAGGAGAGTCTTAGAGTTCGAGTCATCTTTACAGATATCATGCGCCCTTTTCGTCGAGGTATTAAGGTTCGACTCGATGATTCACTAGGAAGTGTTTGGTCTCCTATTAAGTATGAAAAGCTGCCGAAAATATGCTCGTATTGTGGCCGGATAAGACATGGGATGAGAGATTGCTCTTTCTCGTTGGTTGATGATGGTTCACCCTCACACCGGCAAGAGTACGGGATGTGGATGTCATTTTCTAGGCGTTCTTCACATGTTTTCCGTTTAGTAACCAATAGTTCTATGGGTTCTAATAGGATCATGTCGGAGGTTTCACCAAATCCGATTGGCAATCTGGTGAAGAGTCAAGAAAAAACGGCGGGACAGGAAGTGGGTCCTCACCAGAGCTTTGGAAGCAATTCGGGGCTTAAACGAGCGAAACCGGAGCGTAAAATGACCATTCTACCCCTGGAGCCTCATTAG

Protein sequence

MCGKVLVWHHRGKVSVVFLQFLSISFMAFENMMENWERFSLTIEEDSTEVDVDRQAALITSQSLGLIGKLLAPRIISSEVMRHTFKSAWNIPNGLMEPWLFDKFLLVLSKPIPMVKRTAMVFQFATFWVHFCDLPMDLYNQSMAERLGNAIGQFQEYDNGGRGYGWKESLRVRVIFTDIMRPFRRGIKVRLDDSLGSVWSPIKYEKLPKICSYCGRIRHGMRDCSFSLVDDGSPSHRQEYGMWMSFSRRSSHVFRLVTNSSMGSNRIMSEVSPNPIGNLVKSQEKTAGQEVGPHQSFGSNSGLKRAKPERKMTILPLEPH
Homology
BLAST of Lag0011596 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])

HSP 1 Score: 184.1 bits (466), Expect = 1.9e-42
Identity = 98/249 (39.36%), Postives = 132/249 (53.01%), Query Frame = 0

Query: 27  MAFENMMENWERFSLTIEEDSTEVDVDRQAALITSQSL--GLIGKLLAPRIISSEVMRHT 86
           M  EN++ +W++F LT EED   +DVD  A  +  Q L   L+GKLLA RIIS++V+   
Sbjct: 1   MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60

Query: 87  FKSAWNIPNGL-------------------------MEPWLFDKFLLVLSKPIPMVKRTA 146
              AW + + L                           PW FDK L+VL KP      + 
Sbjct: 61  LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120

Query: 147 MVFQFATFWVHFCDLPMDLYNQSMAERLGNAIGQFQEYDNGGRGYGWKESLRVRVIFTDI 206
           + F    FW+H  DLPM   N++MA RLGNAIG F + D   +G+ W  SLR+RV+  DI
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLI-DI 180

Query: 207 MRPFRRGIKVRLDDSLGSVWSPIKYEKLPKICSYCGRIRHGMRDCS--FSLVDDGSPSHR 247
            +P RRGIK+ +D  +G  W PI+YE+LP  C +CG I H   DC   +    D S +  
Sbjct: 181 TKPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRA-T 240

BLAST of Lag0011596 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])

HSP 1 Score: 177.6 bits (449), Expect = 1.8e-40
Identity = 99/257 (38.52%), Postives = 141/257 (54.86%), Query Frame = 0

Query: 27  MAFENMMENWERFSLTIEEDSTEVDVDRQAALITSQ--SLGLIGKLLAPRIISSEVMRHT 86
           MA  N++E W+ F LT EED   VD+D  A   T +   L LI KLL+ R IS  V+++T
Sbjct: 1   MAASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNT 60

Query: 87  FKSAWNIP------------------------NGL--MEPWLFDKFLLVLSKPIPMVKRT 146
            K AW +                         N +  M PW FD+ L+++  P+ + K  
Sbjct: 61  LKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPL 120

Query: 147 AMVFQFATFWVHFCDLPMDLYNQSMAERLGNAIGQFQEYDNGGRGYGWKESLRVRVIFTD 206
            M F+  + WVHF DL +   N++MA RLGNAIG F++ ++    + W   LRVRV F D
Sbjct: 121 DMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRF-D 180

Query: 207 IMRPFRRGIKVRLDDSLGSVWSPIKYEKLPKICSYCGRIRHGMRDCSFSLVDDGSPSHRQ 254
           +M+P  RGIK+ LD  +G  W PI+YE+LP    +CGR+ H ++DCS   VD  S S   
Sbjct: 181 VMKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVD--SVSKNL 240

BLAST of Lag0011596 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 155.2 bits (391), Expect = 9.3e-34
Identity = 97/319 (30.41%), Postives = 145/319 (45.45%), Query Frame = 0

Query: 27  MAFENMMENWERFSLTIEEDSTEVDVDRQAALITSQSLG--LIGKLLAPRIISSEVMRHT 86
           MA  +++E W+ F LT EE+ T +DVD  A   T   L   L+GKL   R I+  VM++T
Sbjct: 1   MATFDLLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNT 60

Query: 87  FKSAWNIPNGLME--------------------------PWLFDKFLLVLSKPIPMVKRT 146
            ++AW + N   E                          PW FD+ L++++KP+ ++  +
Sbjct: 61  MRTAWKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPS 120

Query: 147 AMVFQFATFWVHFCDLPMDLYNQSMAERLGNAIGQFQEYDNGGRGYGWKESLRVRVIFTD 206
            + F     WV F DLP+    + MA RLGNA+G F+E D       W  +LRVRV+  D
Sbjct: 121 ELDFTKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVML-D 180

Query: 207 IMRPFRRGIKVRLDDSLGSVWSPIKYEKLPKICSYCGRIRHGMRDCSFSLVDDGSPSHRQ 266
           I +P RRGIK+ LD  +G  W PI+YE+LP  C +CG                 S   + 
Sbjct: 181 ISKPLRRGIKLNLDGPIGGAWIPIQYERLPDFCYHCGL---------------SSSRKKH 240

Query: 267 EYGMWMSFSRRSSHVFRLVTN------SSMGSNRIMSEVSPNPIGNLVKSQEKTAGQEVG 312
           +YG W+ +          +           G+N   S  SP   G+         G    
Sbjct: 241 QYGSWLRYQGTVKPTMPQMKQPQEDLLDKSGNNSFSSSTSPVGAGSQGVQSAPATGPIAI 300

BLAST of Lag0011596 vs. NCBI nr
Match: XP_028122006.1 (uncharacterized protein LOC114319195 [Camellia sinensis])

HSP 1 Score: 137.1 bits (344), Expect = 2.6e-28
Identity = 84/272 (30.88%), Postives = 131/272 (48.16%), Query Frame = 0

Query: 30  ENMMENWERFSLTIEEDS-TEVDVDRQAALITSQSLGLIGKLLAPRIISSEVMRHTFKSA 89
           +++++     SLT EED+   +  +  + ++    + L+GKLL  R  + E M++T  S 
Sbjct: 3   DSLLDLTRTLSLTSEEDAVVRIGGESTSLMMGKSDMCLVGKLLTRRPFNVEAMKNTLLSV 62

Query: 90  WNIPNGLM-------------------------EPWLFDKFLLVLSKPIPMVKRTAMVFQ 149
           W    G+                           PW FDK LL+L +  P V+ + +   
Sbjct: 63  WQPTKGMQVRVIGDNLFVFVFGHVVDKRRVLSDGPWTFDKHLLMLGEMDPNVQPSDIQLT 122

Query: 150 FATFWVHFCDLPMDLYNQSMAERLGNAIGQFQEYDNGGRGYGWKESLRVRVIFTDIMRPF 209
              FWVH C+LP+ L N+ + E +GNA+GQF + D    G  W  ++R+RV   D+ +P 
Sbjct: 123 RVQFWVHVCNLPLVLMNKKVGEIVGNAVGQFIDMDYEDGGIVWGRTMRIRVAL-DVRKPL 182

Query: 210 RRGIKVRLDDSLGSVWSPIKYEKLPKICSYCGRIRHGMRDCSFSLVD-DGSPSHRQEYGM 268
           RRG+K+ L  S   +W   KYE+LP  C +CGR+ H  R+C   L   DGS     +YG 
Sbjct: 183 RRGMKLAL-SSAEPIWVDFKYERLPIYCYFCGRLGHSERECDDKLSSADGSRVDSLQYGA 242

BLAST of Lag0011596 vs. NCBI nr
Match: XP_028124075.1 (uncharacterized protein LOC114321128 [Camellia sinensis])

HSP 1 Score: 136.7 bits (343), Expect = 3.4e-28
Identity = 83/272 (30.51%), Postives = 131/272 (48.16%), Query Frame = 0

Query: 30  ENMMENWERFSLTIEEDS-TEVDVDRQAALITSQSLGLIGKLLAPRIISSEVMRHTFKSA 89
           +++++     SLT EED+   +  D  + ++    + L+GKLL  R  + E M++T  S 
Sbjct: 3   DSLVDLTRTLSLTSEEDAVVRIGGDSTSLMMGKSDMCLVGKLLTRRPFNVEAMKNTLLSV 62

Query: 90  WNIPNGLM-------------------------EPWLFDKFLLVLSKPIPMVKRTAMVFQ 149
           W    G+                           PW FDK LL+L +  P V+ + +   
Sbjct: 63  WQPTKGMQVRVIGDNLFVFVFGHVVDKRRVLSNGPWTFDKHLLMLGEMDPNVQPSDIQLT 122

Query: 150 FATFWVHFCDLPMDLYNQSMAERLGNAIGQFQEYDNGGRGYGWKESLRVRVIFTDIMRPF 209
              FWVH C+LP+ L N+ + + +GNA+GQF + D    G  W  ++R+RV   D+ +P 
Sbjct: 123 GVQFWVHVCNLPLVLMNKQVGQIVGNAVGQFIDMDYEDGGIAWGRTMRIRVAI-DVRKPL 182

Query: 210 RRGIKVRLDDSLGSVWSPIKYEKLPKICSYCGRIRHGMRDCSFSL-VDDGSPSHRQEYGM 268
           RRG+K+ L  S   +W   KYE+LP  C +CGR+ H  R+C   L   DG+     +YG 
Sbjct: 183 RRGMKLAL-SSADPIWVDFKYERLPIYCYFCGRLGHSDRECDDKLSFADGTRVDSLQYGA 242

BLAST of Lag0011596 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 9.1e-43
Identity = 98/249 (39.36%), Postives = 132/249 (53.01%), Query Frame = 0

Query: 27  MAFENMMENWERFSLTIEEDSTEVDVDRQAALITSQSL--GLIGKLLAPRIISSEVMRHT 86
           M  EN++ +W++F LT EED   +DVD  A  +  Q L   L+GKLLA RIIS++V+   
Sbjct: 1   MDHENLLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRV 60

Query: 87  FKSAWNIPNGL-------------------------MEPWLFDKFLLVLSKPIPMVKRTA 146
              AW + + L                           PW FDK L+VL KP      + 
Sbjct: 61  LLLAWKVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISE 120

Query: 147 MVFQFATFWVHFCDLPMDLYNQSMAERLGNAIGQFQEYDNGGRGYGWKESLRVRVIFTDI 206
           + F    FW+H  DLPM   N++MA RLGNAIG F + D   +G+ W  SLR+RV+  DI
Sbjct: 121 LEFNRVAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLI-DI 180

Query: 207 MRPFRRGIKVRLDDSLGSVWSPIKYEKLPKICSYCGRIRHGMRDCS--FSLVDDGSPSHR 247
            +P RRGIK+ +D  +G  W PI+YE+LP  C +CG I H   DC   +    D S +  
Sbjct: 181 TKPLRRGIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRA-T 240

BLAST of Lag0011596 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)

HSP 1 Score: 177.6 bits (449), Expect = 8.5e-41
Identity = 99/257 (38.52%), Postives = 141/257 (54.86%), Query Frame = 0

Query: 27  MAFENMMENWERFSLTIEEDSTEVDVDRQAALITSQ--SLGLIGKLLAPRIISSEVMRHT 86
           MA  N++E W+ F LT EED   VD+D  A   T +   L LI KLL+ R IS  V+++T
Sbjct: 1   MAASNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNT 60

Query: 87  FKSAWNIP------------------------NGL--MEPWLFDKFLLVLSKPIPMVKRT 146
            K AW +                         N +  M PW FD+ L+++  P+ + K  
Sbjct: 61  LKIAWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPL 120

Query: 147 AMVFQFATFWVHFCDLPMDLYNQSMAERLGNAIGQFQEYDNGGRGYGWKESLRVRVIFTD 206
            M F+  + WVHF DL +   N++MA RLGNAIG F++ ++    + W   LRVRV F D
Sbjct: 121 DMDFRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRF-D 180

Query: 207 IMRPFRRGIKVRLDDSLGSVWSPIKYEKLPKICSYCGRIRHGMRDCSFSLVDDGSPSHRQ 254
           +M+P  RGIK+ LD  +G  W PI+YE+LP    +CGR+ H ++DCS   VD  S S   
Sbjct: 181 VMKPLHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVD--SVSKNL 240

BLAST of Lag0011596 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 4.5e-34
Identity = 97/319 (30.41%), Postives = 145/319 (45.45%), Query Frame = 0

Query: 27  MAFENMMENWERFSLTIEEDSTEVDVDRQAALITSQSLG--LIGKLLAPRIISSEVMRHT 86
           MA  +++E W+ F LT EE+ T +DVD  A   T   L   L+GKL   R I+  VM++T
Sbjct: 1   MATFDLLEEWKNFKLTSEEEETAIDVDASAPATTGSRLEQILVGKLFIKRPITCPVMKNT 60

Query: 87  FKSAWNIPNGLME--------------------------PWLFDKFLLVLSKPIPMVKRT 146
            ++AW + N   E                          PW FD+ L++++KP+ ++  +
Sbjct: 61  MRTAWKLENNAFEVQSLGYNLFLFSFARALDRNKIYKSGPWTFDRTLVLINKPVALIPPS 120

Query: 147 AMVFQFATFWVHFCDLPMDLYNQSMAERLGNAIGQFQEYDNGGRGYGWKESLRVRVIFTD 206
            + F     WV F DLP+    + MA RLGNA+G F+E D       W  +LRVRV+  D
Sbjct: 121 ELDFTKLPIWVRFFDLPLGCITRDMAIRLGNALGGFEEADCDDLNPDWGSNLRVRVML-D 180

Query: 207 IMRPFRRGIKVRLDDSLGSVWSPIKYEKLPKICSYCGRIRHGMRDCSFSLVDDGSPSHRQ 266
           I +P RRGIK+ LD  +G  W PI+YE+LP  C +CG                 S   + 
Sbjct: 181 ISKPLRRGIKLNLDGPIGGAWIPIQYERLPDFCYHCGL---------------SSSRKKH 240

Query: 267 EYGMWMSFSRRSSHVFRLVTN------SSMGSNRIMSEVSPNPIGNLVKSQEKTAGQEVG 312
           +YG W+ +          +           G+N   S  SP   G+         G    
Sbjct: 241 QYGSWLRYQGTVKPTMPQMKQPQEDLLDKSGNNSFSSSTSPVGAGSQGVQSAPATGPIAI 300

BLAST of Lag0011596 vs. ExPASy TrEMBL
Match: A0A2N9FJK9 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS14993 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 1.0e-25
Identity = 80/255 (31.37%), Postives = 117/255 (45.88%), Query Frame = 0

Query: 30  ENMMENWERFSLTIEEDSTEVDVDRQAALITSQSLG---LIGKLLAPRIISSEVMRHTFK 89
           + ++E+W RFSLT  ED     +  + A+  S+ +G   L+GKLL  +  +   ++ T  
Sbjct: 3   DELVEDWRRFSLT--EDEAPGFIIAEEAMGDSEVIGSHCLLGKLLTAKFCNKAALKATML 62

Query: 90  SAWNIPNGLM-------------------------EPWLFDKFLLVLSKPIPMVKRTAMV 149
             W   +G++                          PWLFD  LLVL+          + 
Sbjct: 63  RIWGAASGVVAQDMGRNLFLFQFQNDADCKRVLHGSPWLFDNNLLVLNVFDGSCPANQIS 122

Query: 150 FQFATFWVHFCDLPMDLYNQSMAERLGNAIGQFQEYDNGGRGYGWKESLRVRVIFTDIMR 209
           F    FWV F  +P+    +   ERLG AIG  +  D    G GW   LRVR I  D+ +
Sbjct: 123 FNHCCFWVQFHGIPLFYMTKQTGERLGEAIGNVETVDVSANGVGWGPYLRVR-ISLDVTK 182

Query: 210 PFRRGIKVRLDDSLGSVWSPIKYEKLPKICSYCGRIRHGMRDCSFSLVDDGSPSHR-QEY 256
           P +RG  +    S G  W   KYE+LP +C +CG++ HG R+C   +   G+ S   + Y
Sbjct: 183 PLQRGRLITFGSS-GQQWIAFKYERLPWLCFHCGKLGHGERECGLKIHSGGALSGEFKHY 242

BLAST of Lag0011596 vs. ExPASy TrEMBL
Match: A0A6J1D765 (uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017902 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 6.5e-25
Identity = 79/245 (32.24%), Postives = 120/245 (48.98%), Query Frame = 0

Query: 30  ENMMENWERFSLTIEEDSTEVDVDRQAALITSQSLGL--IGKLLAPRIISSEVMRHTFKS 89
           + + + WE F  T +E+ T V +DR   ++T+ ++ L  + KL   + IS+E +R   KS
Sbjct: 2   DEITDLWEHFKSTNDENET-VTIDRGKPILTADNVKLCVVAKLHTSKRISAEAIRSVMKS 61

Query: 90  AWNIPN-----------------GLME--------PWLFDKFLLVLSKPIPMVKRTAMVF 149
            W + N                  L E        PW F+K LLVL+ P    +   M F
Sbjct: 62  VWRVHNSTRFEPLGMNIYVILFKSLSEKSRVLSSGPWTFNKSLLVLTSPTATNQPLDMNF 121

Query: 150 QFATFWVHFCDLPMDLYNQSMAERLGNAIGQFQEYDNGGRGYGWK-ESLRVRVIFTDIMR 209
            F  FW+   ++P +  +  MA  LG  +G  +E +  G   GW    +RVRV   D+ +
Sbjct: 122 NFCAFWIQIHNIPFECISTEMANILGAKLGDVEEIEGDGAD-GWAGPFIRVRVKI-DVSK 181

Query: 210 PFRRGIKVRLDDSLGSVWSPIKYEKLPKICSYCGRIRHGMRDCS--FSLVDDGSPSHRQE 245
           P RRGIK++  D    +W P++YEKLP  C  CG+I H  R+C     +V   SP   ++
Sbjct: 182 PLRRGIKLKNSDG-KDIWCPLRYEKLPDFCYECGKIGHSGRECEQRSKVVTTNSP---EQ 239

BLAST of Lag0011596 vs. TAIR 10
Match: AT2G13450.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02000.1); Has 247 Blast hits to 243 proteins in 13 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 2; Plants - 243; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.5 bits (114), Expect = 1.1e-05
Identity = 52/207 (25.12%), Postives = 86/207 (41.55%), Query Frame = 0

Query: 74  RIISSEVMRHTFKSAWNIPNGL-MEPWLFDKFLLVLSKPIPMVKRTAMVFQFATFWVHFC 133
           R+++   ++  F+S  ++ + L  EPWL++ + +   +    V  T  +      WV   
Sbjct: 71  RVLNDTFVQFIFQSEIDLLSVLRREPWLYNNWFVTAQR--WEVNLTFHLLTSIELWVQMR 130

Query: 134 DLPMDLYNQSMAERLGNAIGQFQEYDNGGRGYGWKESLRVRVIF--TDIMRPFRRGIKVR 193
            +P+    +  A  + + +G+    D           +RVR+ F  TD +R F R I   
Sbjct: 131 GIPLLYVCEETALEIAHELGEIITLDFHDSTTTQIAYIRVRIRFGITDRLRFFLRII--- 190

Query: 194 LDDSLGSVWSPIKYEKLPKICSYCGRIRHGMRDCSFSLVDDGSPSHRQEYGMWMSFSRRS 253
             DS  +     +YE+L +ICS C R+ H    C +  ++     HR          R  
Sbjct: 191 -FDSGETALISFQYERLRRICSSCFRMTHHRNSCLYRQIES---LHRVTNTTAQRNVREE 250

Query: 254 SHVFRLVTNSSMGSNRIMSEVS-PNPI 277
             +      SSM S   MSE S P PI
Sbjct: 251 VFMRDENLRSSMNSQSQMSESSFPTPI 268

BLAST of Lag0011596 vs. TAIR 10
Match: AT4G02000.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G13450.1); Has 165 Blast hits to 161 proteins in 11 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 2; Plants - 161; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.1 bits (113), Expect = 1.5e-05
Identity = 48/183 (26.23%), Postives = 76/183 (41.53%), Query Frame = 0

Query: 97  EPWLFDKFLLVLSKPIPMVKRTAMVFQFATFWVHFCDLPMDLYNQSMAERLGNAIGQFQE 156
           EPWL++ + +   +    V  T  +      WV    +P+    +  A  + + +G+   
Sbjct: 15  EPWLYNNWFVTTHR--WEVNLTFHLLTSIELWVQMRGIPLLYVCEETALEIAHELGKILT 74

Query: 157 YDNGGRGYGWKESLRVRVIF--TDIMRPFRRGIKVRLDDSLGSVWSPIKYEKLPKICSYC 216
            D           +RVR+ F  TD +R F+R   +  D    ++ S  +YE+L +ICS C
Sbjct: 75  LDFHDSTTTQIAYIRVRIRFGITDRLRFFQR---IIFDFGEAALIS-FQYERLRRICSSC 134

Query: 217 GRIRHGMRDCSFSLVDDGSPSHRQEYGMWMSFSRRSSHVFRLVTNSSMGSNRIMSEVS-P 276
            R+ H    C +  ++   P HR          R    +      SSM S   MSE S P
Sbjct: 135 FRMTHHRNSCPYRQIE---PLHRVTNSTAQRNVREEVFMRDENLRSSMNSQSQMSESSFP 188

BLAST of Lag0011596 vs. TAIR 10
Match: AT1G48095.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G36960.1); Has 82 Blast hits to 82 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.8 bits (112), Expect = 2.0e-05
Identity = 23/57 (40.35%), Postives = 37/57 (64.91%), Query Frame = 0

Query: 170 LRVRVIFTDIMRPFRRGIKVRLDDSLGSVWSPIKYEKLPKICSYCGRIRHGMRDCSF 227
           +++R++FTD +R FRR   VR +   G++    +YEKL +IC+ C RI H + +C F
Sbjct: 40  VKIRLVFTDRLRFFRR---VRFESREGAMIG-FEYEKLRRICTNCCRITHHVNNCPF 92

BLAST of Lag0011596 vs. TAIR 10
Match: AT2G17920.1 (nucleic acid binding;zinc ion binding )

HSP 1 Score: 47.4 bits (111), Expect = 2.6e-05
Identity = 41/161 (25.47%), Postives = 67/161 (41.61%), Query Frame = 0

Query: 74  RIISSEVMRHTFKSAWNIPN-GLMEPWLFDKFLLVLSK--PIPMVKRTAMVFQFATFWVH 133
           RII    ++  F+S  ++ +    EPWLF+ + +   +  P P +     +      WV 
Sbjct: 71  RIIDDTYVQFLFQSEMDLLSVQRREPWLFNNWFVASQRWQPAPALNFVTTI----DLWVQ 130

Query: 134 FCDLPMDLYNQSMAERLGNAIG-----QFQEYDNGGRGYGWKESLRVRVIFTDIMRPFRR 193
              +P    ++  A  +   IG      F +  +    Y     +RVRV  TD +R F+R
Sbjct: 131 MRGIPFLYVSEETALEIAQEIGAIISLDFHDTTSTQIAY---IRVRVRVGITDSLRFFQR 190

Query: 194 GIKVRLDDSLGSVWSPIKYEKLPKICSYCGRIRHGMRDCSF 227
                  +S  S     +YE+L +ICS C R  H    C +
Sbjct: 191 ----ITFESGESALIRFQYERLRRICSNCFRFTHNRNYCPY 220

BLAST of Lag0011596 vs. TAIR 10
Match: AT2G41590.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25200.1); Has 221 Blast hits to 217 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 221; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.4 bits (106), Expect = 9.7e-05
Identity = 35/135 (25.93%), Postives = 56/135 (41.48%), Query Frame = 0

Query: 97  EPWLFDKFLLVLSKPIPMVKRTAMVFQFAT---FWVHFCDLPMDLYNQSMAERLGNAIGQ 156
           EPWLF+ + +  ++        A    F T    WV    +P+   ++     +   +G+
Sbjct: 95  EPWLFNNWFVAATR-----WEVAPAHNFVTTIDLWVQIRGIPLPYVSEETVMEIAQDLGE 154

Query: 157 FQEYDNGGRGYGWKESLRVRVIF--TDIMRPFRRGIKVRLDDSLGSVWSPIKYEKLPKIC 216
               D           +RVRV F  TD +R F+R +     DS  +     +YE+L +IC
Sbjct: 155 VLMLDYHDTTSIQIAYIRVRVRFGITDRLRFFQRIV----FDSGETATIRFQYERLRRIC 214

Query: 217 SYCGRIRHGMRDCSF 227
           S C R  H    C +
Sbjct: 215 SSCFRFTHNRAYCPY 220

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022156185.11.9e-4239.36uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha... [more]
XP_022132681.11.8e-4038.52uncharacterized protein LOC111005481 [Momordica charantia][more]
XP_022158377.19.3e-3430.41uncharacterized protein LOC111024874 [Momordica charantia][more]
XP_028122006.12.6e-2830.88uncharacterized protein LOC114319195 [Camellia sinensis][more]
XP_028124075.13.4e-2830.51uncharacterized protein LOC114321128 [Camellia sinensis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DU559.1e-4339.36uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1BSZ18.5e-4138.52uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A6J1DX304.5e-3430.41uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A2N9FJK91.0e-2531.37CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS1499... [more]
A0A6J1D7656.5e-2532.24uncharacterized protein LOC111017902 OS=Momordica charantia OX=3673 GN=LOC111017... [more]
Match NameE-valueIdentityDescription
AT2G13450.11.1e-0525.12unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G02000.11.5e-0526.23unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT1G48095.12.0e-0540.35unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT2G17920.12.6e-0525.47nucleic acid binding;zinc ion binding [more]
AT2G41590.19.7e-0525.93unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 97..174
e-value: 1.0E-10
score: 41.3
IPR025836Zinc knuckle CX2CX4HX4CPFAMPF14392zf-CCHC_4coord: 178..225
e-value: 1.1E-8
score: 34.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 284..320
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 304..320
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 284..302
NoneNo IPR availablePANTHERPTHR31286:SF62SUBFAMILY NOT NAMEDcoord: 33..312
IPR040256Uncharacterized protein At4g02000-likePANTHERPTHR31286GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKEcoord: 33..312

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0011596.1Lag0011596.1mRNA