Lag0011576 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0011576
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionE3 ubiquitin-protein ligase RNF126-like
Locationchr1: 28132049 .. 28139478 (-)
RNA-Seq ExpressionLag0011576
SyntenyLag0011576
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGATAATAGAGCTAGGCTGTGGCAAGTTCTTAGAATTGAGTTAAAAGTGGTGATTATTTGTCAATGCCGGAAGAATTATTTTGCTGCAGCAGAGCTTGGTTTTGCAGAATGCTCAGGTAAAGGTTGAAGGTAGTATTGGTTTATTTGTTTTGATTAAGCTATTCTTTGTCTAACGTTTTGAATTCTTAAGGGAAGGATGGTTAGTATTGCTCGGGACACGTAATAGTTCAAGTTTGAGGGTATGATAATTCCCCAAAAAGGAGTTATTTAGGCCTTATTTCTATAGTGATTTGTGTGTCTTTTGTTCTAAATAGAGTTGCTTTTAGATATATATAATATGTTTTAACCCATTTGGAAGAATTGATGCTTTGGAAGTTATTTTGTTAGAATATATTGCTGAGCGACTTGAGGGAGCAAAATTTGTGCTGGAGCAAAGCAATGAGCAAAACTGCCACGTCACAGCTCGTTAGCCAATTTAGTGAACTGAATTCTGTTAAGCTATTCTCGGGATAAAGGAGCAAGGAGAGCCATCCACGTGTCTAGGTCAACCTAATTCAAGCTTCCAATCACTCTATTAAAGGAGGAGCTGTCTGAAGTCAAATTCAGTCCATCCTTGGAGGAACATTACACTCTTGGAAAGTTTACTTCCACCTTTGGGAGCCGAATAGAGGAGAGAGATTGTAGACCTACAAGAAAACCATCAATTGCAAGCTGATCAAGAGAATTACATTGTTTTGTAGTTATGGATATGATTACTCAGATTGTAACGTGTGTTGCTATGCATTTTATGGACTAAGTAACCTTAGGCGTTGGTTAGTGAACATGTAATTGCTGCGCTTAACTTCTATGCAATAAATATTGATTTGATGCATTTTGATTAATTGTTGTGCTCATTTCTATTTTATGCCCGCTTGGTCAGTCGGTATGAATACCACTTTCTAGTTTCAGGGATGATTTCGGGAGTTTGTGACATTTAATTACACTAGATCATTGTGTATTGGTGAACGCCAGTGACTGAGTTAGGGATAGCCAGTTGCCTAGTGCTTGATCGGTAGTACTTCATTGGAGTTGAAACACATTCTAAAAAATCTGGAGTTTCGAGAGGAATATGCTAATAAGACTGCGAGAGTTTACCTGATCAATAATATTGCTAGAACATTTTTTAAAATAATTACTGAAACCTGACCAGTGCCTGTCCTTAATCTGTCTGCCTATTTGTTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTCTGTTCTGTCATTTCTTTTGCTTCAGCATTTTATAAAAATCAATCACTTTTACCACTTTTGAAACTATTGAAAAACTAAGCAGAATAGATAAAGTGAAAACTAATTAAGACCTTGGATTCGATAAATACTTATTACTTGTTGTGGACTGTGTATACTTGCACAGAGTTCTAGAGTCTTTTTATATCTTTTTTTTACTCACTCTAGGAGCCCAACAATCCCCCTGCTAGCTCATACGGAATCAACCTTACAACAAAAGTGATGAAAGAGTTTGAAGCGTTCAAATTCGATAAAGAGAATTAACGTTAATTATATGCGATGTACTTAACGTGGTAAAGTTCAATTATGAATTAAACTACATATTGAGAAAATTGAAAATGTTTAAATAAGATTTAAGTTTTGATAAAAATATATTGGTTAAATGTATTAATAAAGATTCATATTGGAGCAATTAGTTTTGAGAGGAATTGGGATTAATGGAATTATTTAATTTAGCATTTGATATTAAATTAAATAATCATAATTAATTTAAAATATTTAAATTGATTATTTAAAATGAATTAAATATTAAAATTAATGATAGAAATTGAATTTGAGAATTCAATTTCAAAGCGACCCATTAGCATGAAATTAGTTCATGCAATTCATGGAGAATTGACACCAAATTAGGTGACAAATCAAGATCCACCATCACTTATCCCTTTATATATATAAGCCTTTGTCTTCTTCATTAAAGGTTAATGGAATGGACTGGAAAAATTCATGCAAAGCTTCAATCTCTCTCTCAAAAATTCAGATTAATGGCTAGAAGTTCTCTCTAAAAACCCATTCTTTCTCCCTTCCAATTCATCACATTTTAGCTCCCACAAGCTAGTCCTATGACCGGAGAATAACGGGGATGATCTCGATGGTAGTCCACGATGTGTTCGTGTGAAGAATCATCCAATGGAAATGCAAGAAACCGAGCTACAAAGTTAAGTCTCTCGGATCCTCTGTTTTACTATTTAAAAGACAACATGTTTTCGTTTTCTAAAATTGATGTAGTTAAGTGCCTCAAATTGCTTCCGCATGTGTTATATGAACACCTTCAGCCCCAAAATTTAGGGGCCACAAATTGAAAAAGTTTAACGAAAAAAATCTTCTGTGCATGCTGAGGAAATATCAAAGTTAGACAAAAAATTTCTCTCACCTCTTCATTTTTGTTCCCCTCCTCAACCAAGAAAAACTCTACCAATTCCTCATTTTTTTGACTCCCATACTATATTAAACATAAAACCTTTTAATATTCTCTCTTATCATTTTAAAAATTCAATTGTAATCATTTATCCCTAAAAAAGCCACCAAATTTATGGGGTTTAACGGAAAAAAAAACTTATTTATCCTCATTCTAGTTTCAATATTTCTTCAATTATACTAAACTTAACTAGTTCGAAGGATAACACTATTTAAATAAAATATCATTGTTATATAGTTGCTTGTATGTATATATGTATGTATATATGTATGTATATATGTATATATGTATATATATGTATTGTAACGCCCCGCGTTTCGAAATTAAGCCATTTTGGAATAGTTGAGTCTATTCACTCATATTCTAATTTGGAAAATTAGAAACTTTAGTTTAGTTCCTAAGATTGGTAAGTTAAATTTTGATAATTCAAGAATTTAGTCTTGGATCGTATCTCCAATTTTCAAAAGAAACCCAAATCGTTTTGATTAGGATTTCTAAATTATTTAAGAACTTTAATTGGGTTTAAACTTTGGGCAAGAGATTTAATTTGGAATTTAAATTAAAGTTTTCTCTTTATTATTTTTGGGATATTTCTCCTAACGGAAAAGAAATAAAAAGGAAAAAAAAAAGAGATTAAGTAAAAAGAAACCCTAAAGTAAAATCTTCTCCTCTTCTCTTTCTCCTTCCTCTCCACGTTGTTTCAGCCCCCCCTTCGGTTTCTTCTTCTCGCCACAATACCCACGTCGCCGTTGCACGCTTTCTTTCTCTCTCTCCCGCCATTCTTATCGAGCATCACCCACGAGCAGCGATTTCTTTCTCCATCTCCTTCTCTGATGCTCTTTCGTTGGTAGTAAGACCCACGACCACCACCTTCATTCTCGTTGTCTCGTTTTCCTTCTTCTCTGGTTCAGATTCACAAGAACCCATGGTCAGGCGAATCAAAATGAGGCCCACACACGTGCAATCAACAGCGTATTCCTCCGCGAACGACTCCAATCTTGTCCAAATCCTTGGGTTTCGGTCTTTAATAAAACATTTCAACATTTTTGGTAAGTTTAGCCTCGACCCACTCATTTTTCTTCAAGTTTATGCATTTACCCACTTGATATAGACTCTAAATTATGTCTAAAACATGACCCATGCGTAATTGACTTCAAATTTGAGTTACCCATGACCCAAATGGCCTAGATATGTTTTACCCATGCTCATTCAACTTCAAAATCAAGATACCCATTTAGAAACGACTTCTAATTTGTAGGCTTGAGGTTATTTGAAAGCCAACCAGTGAGCGTTTGGGCTCGAAATTGGCTTTCGAAGAATACCCATAACCCGAACAGCCTTGGGGCTGAATGCCCATAAGCTAGGAGGTCCTGATTAGTGATTTTGAACTCATTCGACCATTGAGCAACAATCAATCGAGGTCGTTTAGGTGTTGAATGGTAAGTTCTGCCCCCTTTAAACCTTTAGAATTTATCTAGAGTAGCTTTAGTATAGTTTTTAACCTTTGGGTGCCCTCTAGTTTCAGTTTCGTATCAATTTCGGCTTGGGACAACACTTGTATAAGGTATTTCAATGCTGGTTGGTAATGCAGTTTTTAACCTTTGGGTGCCCTGTTCGGTATGTTTTAACCCCTTTCAACACGCTTTATGTCCCTTTTAATTTATGTTAGGTGTTAGAAAGGTTGTTAGGTTATTCCCTAACCTTTAGAAGGACTCTTTTGTGCATGTAGGCCCGTTTATAGCCTATTCTAATATTTCCAACAAGCGTTAGTTGGTTGAAGAGCCATTTTTAGGTTGTTTAAGTAGTTTCTACTTGGATGAGCTTGTTTGCTTGTTTGAGCATGCCATTTGCTTTACTTGCTTGTTAATATATGTTGTGTTTAATATGTATGTAGCTCGCTTTGTGAATGAACGCGATACTTGTTTGATTCTTAAGCATGTTGCTTTGTTGATTCATAAGCATGAGGTATGGTTGTTGTTGGCTATGTTGCATATGAGTCATGTTTGCATAGTGTATGTTCATTGGGGAGAGGCAGAGCATGACGAGTAAGTCATGTGTTGGGTGTGTGTGCGGAGCGTGACGCAGAAATCACGTGTGGGTGTGAGTGCAGAGCGTGCAGCGGAAATCACGTGTGAGTGGCACTGCGCATGACACGTAAATCATATGTTGGGTGGGTTTGCAGAGCGTGCAGCGGAAATTACTTGATCACTAGTTGAATGATTTGAGCGTTGAATCTTGCTCGGGAGAGGGGATTTGGTCTAAGACTTACTTTATTTAATTGCATATGACTAAAGTAGAAATTCTAAGTTTGTGACGGGATTTGGAATAACTTTAGAAGTTGCTTGAAGAACTAAACTCAAAGCCTTGCATGTTAATGAACTTAGATAGGGATATCAAGTTGGTTGCATGCATGCGAATCAATTATGCTCGGGAGAGATAGTTGTGATAAAAGGTTCCTAGACTTTGTAGAATAATTGCATGCTAAATTCATCCCATTAATTAATCCTCATTCTTAATCAATGAAATCAATTCCCTAAGAATCTTTCCATTTGAGTCTCCACTTTTATTTTATGTTTTTTTTTTGTCTTAGATTTTATCTTTATCATTGAGTTTTGCTCCCTAAATAAAATTGAACAAAAGTATTCGCGATACTTAATTTGCTAGAAAACCAATCCAGAGGACGACACTCATTTTACACGAAAACACTATATTATTACTTGACCCGTACACTTGCGGTAAGCAAATTGCACATCACCTATTTCCTGCATGAAACATGTGTCAGCATAATTTCTTTTCATGGTTAAGAGTATATTGGTTGCTTTATCGCTTTCAAAGTATGAAGTTGTGTGTGAATAACATGTTGACGTGGTAGTTTGTTGTGTGTGGCTCACTGAGTTTGAGCTACTTACCAATACGGTGGTTGTACTGATACCCTCCCCCTTTCTTCCCCCAACATTTTTAGATTATGTAGGTGATGAGTTTTATGTGCCTGGTGATGTGGACGAGGAGGTTCACGAGGGATGACCACACGATTTTGCGTATTTGTTATTTTCATTCATTGGATATGATAGTTTTTATTAGTTGATGATTAGTTTGATTCTAGTAATTTGCTGATGAGATAAAGAAATCTTAGTAGTTAATGCTTCCGCTAAGGTGTAAATATGTTAAAGATCAATATTCTTCTTCTTCTATTTTCAGGTTCCAATTCTACTTTGATCTTCTTTATGGAAAGTATCTGTTATACATTAATTATAAAAATTTGTTCATTAATTAATTTTACTAATTCGATTATGGAAAGTATCATCTGATATTAATTAATTATAAACGTAAGAAATTCACTGATTGGTTAATTGGTCACTGCCTGGATTGGAATTACTCTGATTCATTAAATTCAGTTTTGAGATTAACGACTCTAATTTGTTGAGTGATTGTATTCAAATAATAATGTTTGTTTGTAAATCTCTGTTGATTGTGAAGTCTGAATTAATAATAATAATAATAATAATAAAAACTCCAACAAAATAACTACTTAATCTCCACTCTTAATCTTTTCTCCAACACTTTTGCATCTTACATTCACTCAAACAAATAGTTTACAATGATTTTTTTTATATAATATTAGTTAATCTTTGAAAATGAAGAGTTAAGATTTAAATTATTTTTTTAATTAAAAATTAAATTATTTTTTTAAATTAAAATTTAAAAAATCAGTAAGTTATATTTAATTTTCAATATTTACGGGGCATTTTATAAGTTAAAAATATTAGGGTTTCAAGATCACCTATGCATCAAGCCTTTTTTACAATATGTAGGATTGAGGATTTGAACCATAGACCTCATGGTCGTTAGTACAATTTTATGTCAATAATGCAAACTTTCTCTTTAAAACCATAATTTGTCAACATTAAGAAACATTATTTAGTTTATTATTAATTTGTTTGCATTATATCGCTAAATCAAGCGAAATTAATTAAGAAACGATATTTATTTAAGAAGAAAGAGATCCGAATTGAAAGTTTGTGTTTGTGTTTGTTGGAGACAAAGATGAACACTCTCAAACACACAGGGATTAAGTTCCTCTTTTCCGATGAGCAATGACAATGTTAACAAACAAAATTAGAGTCGTTACTCTCCAAACTAAATTTAATGATTCAACCAAATCCATTAGCAATCATTAAATCTCTTATACATTTAGATAATTAATTAATATCACATACGATACTTTCCATAAACAATTACAACTCAAAACCTAATGAAATTAGGAGAAGAAGAAGAATAATAATAATTTGTATTCCAAAAATTCCTAAATCAAACAGACTTCTCCTTCGGGCTTCGCTTATAAATCAAAACCTTCAATTCCAAATCGCAACTATAATTGATCGTGTTCAAAACTTCAATCTAACAATAAAAATAATCGATCATATCTTTCGCTACTTACGCACCGTTCCATTATCGTCTTTACAGCGATGCTCAGGCGGCTTCCGACGCCCAACTGCATCAAGTTCTGGAAGTCCGATTGCGCTTTTTCCTCTGTCTGGTCGACGCTTTTTCAAACCGAATCATTTTCGAAACGGAACCGATTCCATTGAAAGATGCTCTGTTCTCTCTCCCTCTACACGAACTCGACGATGATCCCGTGTTCTTCCAGATCTACATCATGCAGTTGCTCATATCACTCCACATCGGCGCCGTCACTTGTGAGGTCATCGTTGGGCATGTAGCGTCGTACGTCGTTCAAATGGTGGCCGAAAAAAGAGAGATGAACTTCCATCTCGTCGACACTGTCGATCAAATCCACCACAGCTGGATGCGGTTGATTGATGTGGACTTTTCCTACCGCAAGCGCACGGGTCAAGTAATAATATAG

mRNA sequence

ATGTCTGATAATAGAGCTAGGCTGTGGCAAGTTCTTAGAATTGAGTTAAAAGTGGTGATTATTTGTCAATGCCGGAAGAATTATTTTGCTGCAGCAGAGCTTGGTTTTGCAGAATGCTCAGCCCCCCCTTCGGTTTCTTCTTCTCGCCACAATACCCACGTCGCCGTTGCACGCTTTCTTTCTCTCTCTCCCGCCATTCTTATCGAGCATCACCCACGAGCAGCGATTTCTTTCTCCATCTCCTTCTCTGATGCTCTTTCGTTGGTAGTAAGACCCACGACCACCACCTTCATTCTCGTTGTCTCGTTTTCCTTCTTCTCTGGTTCAGATTCACAAGAACCCATGGTCAGGCGAATCAAAATGAGGCCCACACACGTGCAATCAACAGCGTATTCCTCCGCGAACGACTCCAATCTTGTCCAAATCCTTGGGTTTCGGTCTTTAATAAAACATTTCAACATTTTTGCTCGCTTTGTGAATGAACGCGATACTTGTTTGATTCTTAAGCATGTTGCTTTGTTGATTCATAAGCATGAGGTATGGTTGTTGTTGGCTATGTTGCATATGAGTCATGTTTGCATAGTGTATGTTCATTGGGGAGAGGCAGAGCATGACGACGATGCTCAGGCGGCTTCCGACGCCCAACTGCATCAAGTTCTGGAAGTCCGATTGCGCTTTTTCCTCTGTCTGGTCGACGCTTTTTCAAACCGAATCATTTTCGAAACGGAACCGATTCCATTGAAAGATGCTCTGTTCTCTCTCCCTCTACACGAACTCGACGATGATCCCGTGTTCTTCCAGATCTACATCATGCAGTTGCTCATATCACTCCACATCGGCGCCGTCACTTGTGAGGTCATCGTTGGGCATGTAGCGTCGTACGTCGTTCAAATGGTGGCCGAAAAAAGAGAGATGAACTTCCATCTCGTCGACACTGTCGATCAAATCCACCACAGCTGGATGCGGTTGATTGATGTGGACTTTTCCTACCGCAAGCGCACGGGTCAAGTAATAATATAG

Coding sequence (CDS)

ATGTCTGATAATAGAGCTAGGCTGTGGCAAGTTCTTAGAATTGAGTTAAAAGTGGTGATTATTTGTCAATGCCGGAAGAATTATTTTGCTGCAGCAGAGCTTGGTTTTGCAGAATGCTCAGCCCCCCCTTCGGTTTCTTCTTCTCGCCACAATACCCACGTCGCCGTTGCACGCTTTCTTTCTCTCTCTCCCGCCATTCTTATCGAGCATCACCCACGAGCAGCGATTTCTTTCTCCATCTCCTTCTCTGATGCTCTTTCGTTGGTAGTAAGACCCACGACCACCACCTTCATTCTCGTTGTCTCGTTTTCCTTCTTCTCTGGTTCAGATTCACAAGAACCCATGGTCAGGCGAATCAAAATGAGGCCCACACACGTGCAATCAACAGCGTATTCCTCCGCGAACGACTCCAATCTTGTCCAAATCCTTGGGTTTCGGTCTTTAATAAAACATTTCAACATTTTTGCTCGCTTTGTGAATGAACGCGATACTTGTTTGATTCTTAAGCATGTTGCTTTGTTGATTCATAAGCATGAGGTATGGTTGTTGTTGGCTATGTTGCATATGAGTCATGTTTGCATAGTGTATGTTCATTGGGGAGAGGCAGAGCATGACGACGATGCTCAGGCGGCTTCCGACGCCCAACTGCATCAAGTTCTGGAAGTCCGATTGCGCTTTTTCCTCTGTCTGGTCGACGCTTTTTCAAACCGAATCATTTTCGAAACGGAACCGATTCCATTGAAAGATGCTCTGTTCTCTCTCCCTCTACACGAACTCGACGATGATCCCGTGTTCTTCCAGATCTACATCATGCAGTTGCTCATATCACTCCACATCGGCGCCGTCACTTGTGAGGTCATCGTTGGGCATGTAGCGTCGTACGTCGTTCAAATGGTGGCCGAAAAAAGAGAGATGAACTTCCATCTCGTCGACACTGTCGATCAAATCCACCACAGCTGGATGCGGTTGATTGATGTGGACTTTTCCTACCGCAAGCGCACGGGTCAAGTAATAATATAG

Protein sequence

MSDNRARLWQVLRIELKVVIICQCRKNYFAAAELGFAECSAPPSVSSSRHNTHVAVARFLSLSPAILIEHHPRAAISFSISFSDALSLVVRPTTTTFILVVSFSFFSGSDSQEPMVRRIKMRPTHVQSTAYSSANDSNLVQILGFRSLIKHFNIFARFVNERDTCLILKHVALLIHKHEVWLLLAMLHMSHVCIVYVHWGEAEHDDDAQAASDAQLHQVLEVRLRFFLCLVDAFSNRIIFETEPIPLKDALFSLPLHELDDDPVFFQIYIMQLLISLHIGAVTCEVIVGHVASYVVQMVAEKREMNFHLVDTVDQIHHSWMRLIDVDFSYRKRTGQVII
Homology
[Close]
BLAST of Lag0011576 vs. NCBI nr
Match: XP_022985641.1 (RING-H2 finger protein ATL16-like [Cucurbita maxima])

HSP 1 Score: 94.7 bits (234), Expect = 1.6e-15
Identity = 48/113 (42.48%), Postives = 72/113 (63.72%), Query Frame = 0 

Query: 207 DAQAASDAQLHQVLEVRLRFFLCLVDAFSNRIIFETEPIPLKDALFSLPLHELDDDPVFF 266
           D  +  D Q    LEV++R ++ L+    N+I+ ET PIPL+++LF LP +  + DPVF 
Sbjct: 13  DLHSDGDEQSPPTLEVQMRSYIRLISGDLNQIVLETAPIPLRNSLFPLPPNARNIDPVFL 72

Query: 267 QIYIMQLLISLHIGAVTCEVIVGHVASYVVQMVAEKREMNFHLVDTVDQIHHS 320
           QIYI ++L+SL+IGAV  EVI   +AS+ +Q+  E  + N H+V  VD +  S
Sbjct: 73  QIYIAEILLSLNIGAVASEVIAAQIASFTLQLAEEHNDTNVHVVAVVDNVVES 125

[Close]
BLAST of Lag0011576 vs. NCBI nr
Match: KAG6571005.1 (E3 ubiquitin-protein ligase RING1-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 93.6 bits (231), Expect = 3.5e-15
Identity = 48/113 (42.48%), Postives = 71/113 (62.83%), Query Frame = 0 

Query: 207 DAQAASDAQLHQVLEVRLRFFLCLVDAFSNRIIFETEPIPLKDALFSLPLHELDDDPVFF 266
           D  +  D Q    LEV++R ++ L+    N+I+ ET PIPL+++LF LP +  + DPVF 
Sbjct: 13  DLHSDGDEQSPPTLEVQMRSYIRLISGDLNQIVLETAPIPLRNSLFPLPPNARNIDPVFL 72

Query: 267 QIYIMQLLISLHIGAVTCEVIVGHVASYVVQMVAEKREMNFHLVDTVDQIHHS 320
           QIYI  +L+SL+IGAV  EVI   +AS+ +Q+  E  + N H+V  VD +  S
Sbjct: 73  QIYIADILLSLNIGAVASEVISAQIASFTLQLAEEHNDTNVHVVAVVDNVMES 125

[Close]
BLAST of Lag0011576 vs. NCBI nr
Match: XP_022944063.1 (RING-H2 finger protein ATL16-like [Cucurbita moschata])

HSP 1 Score: 93.2 bits (230), Expect = 4.6e-15
Identity = 47/113 (41.59%), Postives = 71/113 (62.83%), Query Frame = 0 

Query: 207 DAQAASDAQLHQVLEVRLRFFLCLVDAFSNRIIFETEPIPLKDALFSLPLHELDDDPVFF 266
           D  +  D Q    LE+++R ++ L+    N+I+ ET PIPL+++LF LP +  + DPVF 
Sbjct: 12  DLHSDGDEQSPPTLEIQMRSYIRLISGDLNQIVLETAPIPLRNSLFPLPPNARNIDPVFL 71

Query: 267 QIYIMQLLISLHIGAVTCEVIVGHVASYVVQMVAEKREMNFHLVDTVDQIHHS 320
           QIYI  +L+SL+IGAV  EVI   +AS+ +Q+  E  + N H+V  VD +  S
Sbjct: 72  QIYIADILLSLNIGAVASEVISAQIASFTLQLAEEHNDTNVHVVAVVDNVMES 124

[Close]
BLAST of Lag0011576 vs. NCBI nr
Match: XP_023512244.1 (RING-H2 finger protein ATL16-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 92.8 bits (229), Expect = 6.0e-15
Identity = 46/113 (40.71%), Postives = 71/113 (62.83%), Query Frame = 0 

Query: 207 DAQAASDAQLHQVLEVRLRFFLCLVDAFSNRIIFETEPIPLKDALFSLPLHELDDDPVFF 266
           D  +  D Q    LEV++R ++ L+    N+I+ ET PIPL+++LF LP +  + DPVF 
Sbjct: 12  DLHSDGDEQSPPTLEVQMRSYIRLISGDLNQIVLETAPIPLRNSLFPLPPNARNIDPVFL 71

Query: 267 QIYIMQLLISLHIGAVTCEVIVGHVASYVVQMVAEKREMNFHLVDTVDQIHHS 320
           QIYI  +L+SL++GAV  E+I   +AS+ +Q+  E  + N H+V  VD +  S
Sbjct: 72  QIYIADILLSLNVGAVASEIISAQIASFTLQLAEEHNDTNVHVVAVVDNVMES 124

[Close]
BLAST of Lag0011576 vs. NCBI nr
Match: KAG6603243.1 (E3 ubiquitin-protein ligase RING1-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 85.9 bits (211), Expect = 7.4e-13
Identity = 53/117 (45.30%), Postives = 73/117 (62.39%), Query Frame = 0 

Query: 210 AASDAQLHQVLEVRLRFFLCLVDAFS-----NRIIFETEPIPLKDALFSLPLHELDDDPV 269
           AA+ ++ H+ LEVR+R F  L+ A S      +I+FET P P+ DALF L L +L  DP+
Sbjct: 16  AAAQSETHKALEVRMRSFNRLISASSFPGVPPQILFETRPTPVNDALFHLSLRQL-HDPL 75

Query: 270 FFQIYIMQLLISLHIGAVTCEVIVGHVASYVVQMVAEKREMNFHLVDTVDQIHHSWM 322
           F   +I +LL +LHI A  CEVI   +AS + Q+ A  RE +FH+V  VD I + WM
Sbjct: 76  F---HIPRLLSTLHIHAAACEVIGWKIASQIAQLSAGNRETSFHIVVEVDFIQNIWM 128

[Close]
BLAST of Lag0011576 vs. ExPASy TrEMBL
Match: A0A6J1J8T7 (RING-H2 finger protein ATL16-like OS=Cucurbita maxima OX=3661 GN=LOC111483640 PE=4 SV=1)

HSP 1 Score: 94.7 bits (234), Expect = 7.7e-16
Identity = 48/113 (42.48%), Postives = 72/113 (63.72%), Query Frame = 0 

Query: 207 DAQAASDAQLHQVLEVRLRFFLCLVDAFSNRIIFETEPIPLKDALFSLPLHELDDDPVFF 266
           D  +  D Q    LEV++R ++ L+    N+I+ ET PIPL+++LF LP +  + DPVF 
Sbjct: 13  DLHSDGDEQSPPTLEVQMRSYIRLISGDLNQIVLETAPIPLRNSLFPLPPNARNIDPVFL 72

Query: 267 QIYIMQLLISLHIGAVTCEVIVGHVASYVVQMVAEKREMNFHLVDTVDQIHHS 320
           QIYI ++L+SL+IGAV  EVI   +AS+ +Q+  E  + N H+V  VD +  S
Sbjct: 73  QIYIAEILLSLNIGAVASEVIAAQIASFTLQLAEEHNDTNVHVVAVVDNVVES 125

[Close]
BLAST of Lag0011576 vs. ExPASy TrEMBL
Match: A0A6J1FXN0 (RING-H2 finger protein ATL16-like OS=Cucurbita moschata OX=3662 GN=LOC111448613 PE=4 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.2e-15
Identity = 47/113 (41.59%), Postives = 71/113 (62.83%), Query Frame = 0 

Query: 207 DAQAASDAQLHQVLEVRLRFFLCLVDAFSNRIIFETEPIPLKDALFSLPLHELDDDPVFF 266
           D  +  D Q    LE+++R ++ L+    N+I+ ET PIPL+++LF LP +  + DPVF 
Sbjct: 12  DLHSDGDEQSPPTLEIQMRSYIRLISGDLNQIVLETAPIPLRNSLFPLPPNARNIDPVFL 71

Query: 267 QIYIMQLLISLHIGAVTCEVIVGHVASYVVQMVAEKREMNFHLVDTVDQIHHS 320
           QIYI  +L+SL+IGAV  EVI   +AS+ +Q+  E  + N H+V  VD +  S
Sbjct: 72  QIYIADILLSLNIGAVASEVISAQIASFTLQLAEEHNDTNVHVVAVVDNVMES 124

[Close]
BLAST of Lag0011576 vs. ExPASy TrEMBL
Match: A0A6J1G7Z5 (E3 ubiquitin-protein ligase RNF126-like OS=Cucurbita moschata OX=3662 GN=LOC111451666 PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 5.3e-09
Identity = 40/113 (35.40%), Postives = 61/113 (53.98%), Query Frame = 0 

Query: 211 ASDAQLHQVLEVRLRFFLCLVDAFSNRIIFETEPIPLKDALFSLPLHELDDDPVFFQIYI 270
           ASD Q  Q+LE+RL     L+   S +I+ +T   P+ DALF   L +L   P     Y+
Sbjct: 24  ASDQQPMQLLELRLGNSTHLISRSSRQILQQTPTTPMGDALFPFVLRDLQHPPFLSNCYV 83

Query: 271 MQLLISLHIGAVTCEVIVGHVASYVVQMVAEKREMNFHLVDTVDQIHHSWMRL 324
           +Q L S  I    C++I   ++S+ +Q+ A   ++NFH+V  VD I   W+ L
Sbjct: 84  LQFLSSFSIPIAACDIIYEEISSFALQLAAGNVDLNFHIVVEVDVIEMIWVDL 136

[Close]
BLAST of Lag0011576 vs. ExPASy TrEMBL
Match: A0A0A0LRB0 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G432790 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.0e-08
Identity = 40/129 (31.01%), Postives = 68/129 (52.71%), Query Frame = 0 

Query: 207 DAQAASDAQLHQVLEVRLRFFLCLVDAFSNRIIFETEPIPLKDALFSLPLHELDDDPVFF 266
           +  AA++ Q  Q +E+RL  F  LV + S++I+ +T PI + D L   PL EL+D P   
Sbjct: 18  NGSAATNGQPLQFVELRLGHFSQLVLSPSHQILQQTSPILISDTLIRFPLRELEDPPFIS 77

Query: 267 QIYIMQLLISLHIGAVTCEVIVGHVASYVVQMVAEKREMNFHLVDTVDQIHHSWMRLIDV 326
              + + L S +I    C+ I   ++S+  Q+VA     NFH++  +D ++  W+ L   
Sbjct: 78  HSSLCRFLSSYNISDAVCDAIFLKISSFAFQLVAGNLNSNFHIIAALDFVYTHWVDLDPA 137

Query: 327 DFSYRKRTG 336
           + +   R G
Sbjct: 138 EDAAAVRQG 146

[Close]
BLAST of Lag0011576 vs. ExPASy TrEMBL
Match: A0A6J1KYV1 (E3 ubiquitin-protein ligase RNF126-like OS=Cucurbita maxima OX=3661 GN=LOC111499496 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.0e-07
Identity = 38/113 (33.63%), Postives = 59/113 (52.21%), Query Frame = 0 

Query: 211 ASDAQLHQVLEVRLRFFLCLVDAFSNRIIFETEPIPLKDALFSLPLHELDDDPVFFQIYI 270
           AS  Q  Q+LE+RL     L+   S +I+ +T   P+ DALF   L +L   P     Y+
Sbjct: 24  ASGQQPIQLLELRLGHSTHLISRSSRQILQQTPSTPIGDALFPFVLRDLQHPPFLSNCYV 83

Query: 271 MQLLISLHIGAVTCEVIVGHVASYVVQMVAEKREMNFHLVDTVDQIHHSWMRL 324
           +Q L S  I    C++I   ++S+ +Q+ A   ++NFH+V  VD     W+ L
Sbjct: 84  LQFLSSFSIPIAACDIIYEEISSFALQLAAGNMDLNFHIVVEVDVNEMIWVDL 136

The following BLAST results are available for this feature:
BLAST of Lag0011576 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022985641.11.6e-1542.48RING-H2 finger protein ATL16-like [Cucurbita maxima][more]
KAG6571005.13.5e-1542.48E3 ubiquitin-protein ligase RING1-like protein, partial [Cucurbita argyrosperma ... [more]
XP_022944063.14.6e-1541.59RING-H2 finger protein ATL16-like [Cucurbita moschata][more]
XP_023512244.16.0e-1540.71RING-H2 finger protein ATL16-like [Cucurbita pepo subsp. pepo][more]
KAG6603243.17.4e-1345.30E3 ubiquitin-protein ligase RING1-like protein, partial [Cucurbita argyrosperma ... [more]
BLAST of Lag0011576 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Lag0011576 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1J8T77.7e-1642.48RING-H2 finger protein ATL16-like OS=Cucurbita maxima OX=3661 GN=LOC111483640 PE... [more]
A0A6J1FXN02.2e-1541.59RING-H2 finger protein ATL16-like OS=Cucurbita moschata OX=3662 GN=LOC111448613 ... [more]
A0A6J1G7Z55.3e-0935.40E3 ubiquitin-protein ligase RNF126-like OS=Cucurbita moschata OX=3662 GN=LOC1114... [more]
A0A0A0LRB02.0e-0831.01RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G432790 P... [more]
A0A6J1KYV11.0e-0733.63E3 ubiquitin-protein ligase RNF126-like OS=Cucurbita maxima OX=3661 GN=LOC111499... [more]
BLAST of Lag0011576 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0011576.1Lag0011576.1mRNA