Lag0011562 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTCGACATTCTTGGTAAGTTCTTTGAGTTCGAGCTTTTGTGGGCTTTGATTCAGCGTATGCAACAATCCCCGTTTGCTTCTCTAGATCATGCGACGTTTCACATTTTGTTTAAGCGTTACGTGTCGACGCATTTGGTTACTGAAGCGATTGCTGCTTATGAGAGATTGCTGGAGTTTAAATTGAGGGATGAGACTTCGTTTTGTAATCTCATTGACGCACTTTGTGAGTATAGACATGTAGTTGAAGCTCAGGATTTGTGTTTTGGGAAGAGCAAGGGGTTGGATTGTGATGCGAGTACGAAGATTCATAACTTGATTCTTCGTGGTTGGCTTAAGATGGGGTGA ATGCTCGACATTCTTGGTAAGTTCTTTGAGTTCGAGCTTTTGTGGGCTTTGATTCAGCGTATGCAACAATCCCCGTTTGCTTCTCTAGATCATGCGACGTTTCACATTTTGTTTAAGCGTTACGTGTCGACGCATTTGGTTACTGAAGCGATTGCTGCTTATGAGAGATTGCTGGAGTTTAAATTGAGGGATGAGACTTCGTTTTGTAATCTCATTGACGCACTTTGTGAGTATAGACATGTAGTTGAAGCTCAGGATTTGTGTTTTGGGAAGAGCAAGGGGTTGGATTGTGATGCGAGTACGAAGATTCATAACTTGATTCTTCGTGGTTGGCTTAAGATGGGGTGA ATGCTCGACATTCTTGGTAAGTTCTTTGAGTTCGAGCTTTTGTGGGCTTTGATTCAGCGTATGCAACAATCCCCGTTTGCTTCTCTAGATCATGCGACGTTTCACATTTTGTTTAAGCGTTACGTGTCGACGCATTTGGTTACTGAAGCGATTGCTGCTTATGAGAGATTGCTGGAGTTTAAATTGAGGGATGAGACTTCGTTTTGTAATCTCATTGACGCACTTTGTGAGTATAGACATGTAGTTGAAGCTCAGGATTTGTGTTTTGGGAAGAGCAAGGGGTTGGATTGTGATGCGAGTACGAAGATTCATAACTTGATTCTTCGTGGTTGGCTTAAGATGGGGTGA MLDILGKFFEFELLWALIQRMQQSPFASLDHATFHILFKRYVSTHLVTEAIAAYERLLEFKLRDETSFCNLIDALCEYRHVVEAQDLCFGKSKGLDCDASTKIHNLILRGWLKMG Homology
BLAST of Lag0011562 vs. NCBI nr
Match: XP_022991827.1 (pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita maxima] >XP_022991828.1 pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita maxima] >XP_022991829.1 pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita maxima]) HSP 1 Score: 209.5 bits (532), Expect = 1.5e-50 Identity = 100/115 (86.96%), Postives = 106/115 (92.17%), Query Frame = 0
BLAST of Lag0011562 vs. NCBI nr
Match: XP_022148858.1 (pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Momordica charantia]) HSP 1 Score: 208.4 bits (529), Expect = 3.3e-50 Identity = 99/115 (86.09%), Postives = 105/115 (91.30%), Query Frame = 0
BLAST of Lag0011562 vs. NCBI nr
Match: XP_022953157.1 (pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita moschata] >XP_022953158.1 pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita moschata] >XP_022953159.1 pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita moschata]) HSP 1 Score: 208.4 bits (529), Expect = 3.3e-50 Identity = 99/115 (86.09%), Postives = 106/115 (92.17%), Query Frame = 0
BLAST of Lag0011562 vs. NCBI nr
Match: XP_023547614.1 (pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita pepo subsp. pepo] >XP_023547616.1 pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita pepo subsp. pepo]) HSP 1 Score: 206.8 bits (525), Expect = 9.7e-50 Identity = 99/115 (86.09%), Postives = 105/115 (91.30%), Query Frame = 0
BLAST of Lag0011562 vs. NCBI nr
Match: KAG7014158.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 206.5 bits (524), Expect = 1.3e-49 Identity = 99/115 (86.09%), Postives = 105/115 (91.30%), Query Frame = 0
BLAST of Lag0011562 vs. ExPASy Swiss-Prot
Match: Q9M8M3 (Pentatricopeptide repeat-containing protein At1g80550, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g80550 PE=1 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 1.2e-34 Identity = 72/118 (61.02%), Postives = 93/118 (78.81%), Query Frame = 0
BLAST of Lag0011562 vs. ExPASy Swiss-Prot
Match: Q9SSR6 (Pentatricopeptide repeat-containing protein At1g52640, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g52640 PE=2 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 1.4e-11 Identity = 35/115 (30.43%), Postives = 66/115 (57.39%), Query Frame = 0
BLAST of Lag0011562 vs. ExPASy Swiss-Prot
Match: Q9LIL5 (Putative pentatricopeptide repeat-containing protein At3g15200 OS=Arabidopsis thaliana OX=3702 GN=At3g15200 PE=3 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 3.2e-11 Identity = 39/116 (33.62%), Postives = 60/116 (51.72%), Query Frame = 0
BLAST of Lag0011562 vs. ExPASy Swiss-Prot
Match: Q9C9A2 (Pentatricopeptide repeat-containing protein At1g71060, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g71060 PE=2 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 1.3e-09 Identity = 36/112 (32.14%), Postives = 64/112 (57.14%), Query Frame = 0
BLAST of Lag0011562 vs. ExPASy Swiss-Prot
Match: Q9LFQ4 (Pentatricopeptide repeat-containing protein At5g15010, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g15010 PE=2 SV=2) HSP 1 Score: 62.4 bits (150), Expect = 3.9e-09 Identity = 37/112 (33.04%), Postives = 58/112 (51.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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