Lag0011329 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0011329
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Retrotransposon protein
Location	chr1: 21591690 .. 21592642 (+)
RNA-Seq Expression	Lag0011329
Synteny	Lag0011329

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTACATTTACTATCTACGAGTTTTAGGGCATAAAACCCAACAAATTCATTTGGGCGGTTGGAGGTCCGATAATGGGACGTTCAGATATGGGTATCAAGCGCAACTGGAACACTTGATGAGGGAGAAACTGTCGGGACGGGACGTTCCAACACAAAGCTGCATTGAATCCAGGGTTCGCACCCTAAAGAAACAATACCAGGCTATTGCAGAGATGATGGGCCCTGGATGCAGTGGCTTCGGCTGGAACGATGAATTTAAGTGCATCGAGGCGGAGAAAGAAACATTCGATCTGTGGGTGAAGGTAAGAACGTTTGACCCTGTTAGCTACTCAAAATTCAACACTTCCTAACATAAACTTTCGGGTGAATGCAGACTCATCCAATCGCAAAAGGCATGCTTAACAAGCCTTTCCCCCATTTTGAGGACCTGGCATATGTATTTGGGAAGGATAGAGCCACGGGTGGGGTGTCAGAGGTGATGGCAGAGATGGGGTCTAACGTACCAGATGATGCAGTAAACCTAAGTGGATCCCTGAACAACGACACCCCCATCCCACCGTTCACTATGCCTAATGTGAACATGTCAGAGGATGAGCCTCGGGTGACGTCGGACAGTCAAACTTACGCAACTGGAAATTCGTCACGTGGTAGTAAGAGAAAGAGATCTGGGCCTAACATGCACATCGCAGAAGCTGTGAGAGAGGGAATGACCTCGTTCACAGAACAACTGAAGTCCATTACTGACTGGCCAGACAAAAAACGTGCCACAGTGGCAGAGTTCCGGGATAAAATTGTGTCCCACTTGATGGAGGTACCCGACCTGGATAATCGAAAAAGGGTGAAGCTCATGGATATCCTTTTCAATAATATGAAAGCGACAAAGAGCTTCTTCTCCATTCCTGCTCCTCTGAAGTTGGAGTATTGTGAATACCTCTTGGACAAACACAGTTGA

mRNA sequence

ATGTACATTTACTATCTACGAGTTTTAGGGCATAAAACCCAACAAATTCATTTGGGCGGTTGGAGGTCCGATAATGGGACGTTCAGATATGGGTATCAAGCGCAACTGGAACACTTGATGAGGGAGAAACTGTCGGGACGGGACGTTCCAACACAAAGCTGCATTGAATCCAGGGTTCGCACCCTAAAGAAACAATACCAGGCTATTGCAGAGATGATGGGCCCTGGATGCAGTGGCTTCGGCTGGAACGATGAATTTAAGTGCATCGAGGCGGAGAAAGAAACATTCGATCTGTGGGTGAAGACTCATCCAATCGCAAAAGGCATGCTTAACAAGCCTTTCCCCCATTTTGAGGACCTGGCATATGTATTTGGGAAGGATAGAGCCACGGGTGGGGTGTCAGAGGTGATGGCAGAGATGGGGTCTAACGTACCAGATGATGCAGTAAACCTAAGTGGATCCCTGAACAACGACACCCCCATCCCACCGTTCACTATGCCTAATGTGAACATGTCAGAGGATGAGCCTCGGGTGACGTCGGACAGTCAAACTTACGCAACTGGAAATTCGTCACGTGGTAGTAAGAGAAAGAGATCTGGGCCTAACATGCACATCGCAGAAGCTGTGAGAGAGGGAATGACCTCGTTCACAGAACAACTGAAGTCCATTACTGACTGGCCAGACAAAAAACGTGCCACAGTGGCAGAGTTCCGGGATAAAATTGTGTCCCACTTGATGGAGGTACCCGACCTGGATAATCGAAAAAGGGTGAAGCTCATGGATATCCTTTTCAATAATATGAAAGCGACAAAGAGCTTCTTCTCCATTCCTGCTCCTCTGAAGTTGGAGTATTGTGAATACCTCTTGGACAAACACAGTTGA

Coding sequence (CDS)

ATGTACATTTACTATCTACGAGTTTTAGGGCATAAAACCCAACAAATTCATTTGGGCGGTTGGAGGTCCGATAATGGGACGTTCAGATATGGGTATCAAGCGCAACTGGAACACTTGATGAGGGAGAAACTGTCGGGACGGGACGTTCCAACACAAAGCTGCATTGAATCCAGGGTTCGCACCCTAAAGAAACAATACCAGGCTATTGCAGAGATGATGGGCCCTGGATGCAGTGGCTTCGGCTGGAACGATGAATTTAAGTGCATCGAGGCGGAGAAAGAAACATTCGATCTGTGGGTGAAGACTCATCCAATCGCAAAAGGCATGCTTAACAAGCCTTTCCCCCATTTTGAGGACCTGGCATATGTATTTGGGAAGGATAGAGCCACGGGTGGGGTGTCAGAGGTGATGGCAGAGATGGGGTCTAACGTACCAGATGATGCAGTAAACCTAAGTGGATCCCTGAACAACGACACCCCCATCCCACCGTTCACTATGCCTAATGTGAACATGTCAGAGGATGAGCCTCGGGTGACGTCGGACAGTCAAACTTACGCAACTGGAAATTCGTCACGTGGTAGTAAGAGAAAGAGATCTGGGCCTAACATGCACATCGCAGAAGCTGTGAGAGAGGGAATGACCTCGTTCACAGAACAACTGAAGTCCATTACTGACTGGCCAGACAAAAAACGTGCCACAGTGGCAGAGTTCCGGGATAAAATTGTGTCCCACTTGATGGAGGTACCCGACCTGGATAATCGAAAAAGGGTGAAGCTCATGGATATCCTTTTCAATAATATGAAAGCGACAAAGAGCTTCTTCTCCATTCCTGCTCCTCTGAAGTTGGAGTATTGTGAATACCTCTTGGACAAACACAGTTGA

Protein sequence

MYIYYLRVLGHKTQQIHLGGWRSDNGTFRYGYQAQLEHLMREKLSGRDVPTQSCIESRVRTLKKQYQAIAEMMGPGCSGFGWNDEFKCIEAEKETFDLWVKTHPIAKGMLNKPFPHFEDLAYVFGKDRATGGVSEVMAEMGSNVPDDAVNLSGSLNNDTPIPPFTMPNVNMSEDEPRVTSDSQTYATGNSSRGSKRKRSGPNMHIAEAVREGMTSFTEQLKSITDWPDKKRATVAEFRDKIVSHLMEVPDLDNRKRVKLMDILFNNMKATKSFFSIPAPLKLEYCEYLLDKHS

Homology

[Close]

BLAST of Lag0011329 vs. NCBI nr
Match: XP_008441954.1 (PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo] >KAA0047736.1 retrotransposon protein [Cucumis melo var. makuwa] >TYK08388.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 266.9 bits (681), Expect = 2.0e-67
Identity = 137/274 (50.00%), Postives = 175/274 (63.87%), Query Frame = 0


Query: 19  GGWRSDNGTFRYGYQAQLEHLMREKLSGRDVPTQSCIESRVRTLKKQYQAIAEMMGPGCS 78
           GGWRSDNGTF+ GY AQL+ +M EKL G ++   S I+  V++LKK Y AIAEM GP CS
Sbjct: 31  GGWRSDNGTFQPGYLAQLQRMMAEKLPGTNIQESSTIDCHVKSLKKTYHAIAEMRGPSCS 90

Query: 79  GFGWNDEFKCIEAEKETFDLWVKTHPIAKGMLNKPFPHFEDLAYVFGKDRATGGVSEVMA 138
           GFGWN+EF+CI AE++ FD W+K+HP AKG+L+K FP+++DL+YVFGKDRATG  SE   
Sbjct: 91  GFGWNEEFQCIIAERDLFDSWIKSHPAAKGLLHKSFPYYDDLSYVFGKDRATGARSETFP 150

Query: 139 EMGSNVP---DDAVNLSGSLNNDTPIPPFTMPNVNMSEDEPRVTSDSQTYATGNSSRGSK 198
            +GSNV    +D + L  S  +D  IP      V+MS DE       Q     N S  SK
Sbjct: 151 NVGSNVSNMFNDTIPLGDS--HDEDIPTMYSQGVHMSPDEMFGIRAGQASERRNCSSVSK 210

Query: 199 RKRSGPNMHIAEAVREGMTSFTEQLKSITDWPDKKRATVAEFRDKIVSHLMEVPDLDNRK 258
           RKR        E +R  M    EQLK+I DWP +KRA   E R ++V  L ++P L ++ 
Sbjct: 211 RKRGSERYETVEVIRSVMEFGNEQLKAIADWPKEKRAMEVEMRAQVVKQLQDIPKLRSQD 270

Query: 259 RVKLMDILFNNMKATKSFFSIPAPLKLEYCEYLL 290
           R KLM ILF +++A + F SIP  LKLEYC  LL
Sbjct: 271 RAKLMQILFRSLEAIEGFLSIPTELKLEYCNILL 302

[Close]

BLAST of Lag0011329 vs. NCBI nr
Match: KAA0035621.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0041647.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0046728.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0052099.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0054495.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 240.7 bits (613), Expect = 1.5e-59
Identity = 124/277 (44.77%), Postives = 168/277 (60.65%), Query Frame = 0


Query: 16  IHLGGWRSDNGTFRYGYQAQLEHLMREKLSGRDVPTQSCIESRVRTLKKQYQAIAEMMGP 75
           ++ GGWRSDNGTFR GY  QL  +M  K+ G ++   S I+SR++ +K+ + A+AEM GP
Sbjct: 28  VNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSNIHA-STIDSRIKLMKRMFHALAEMRGP 87

Query: 76  GCSGFGWNDEFKCIEAEKETFDLWVKTHPIAKGMLNKPFPHFEDLAYVFGKDRATGGVSE 135
            CSGFGWNDE KCI AEKE FD W  +HP AKG+LNK F H+++L+YVFGKDRATGG +E
Sbjct: 88  NCSGFGWNDEKKCIVAEKEVFDDW--SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAE 147

Query: 136 VMAEMGSNVPDDAVNLSGSLNNDTPIPPFTMPNVNMSEDEPRVTSDSQTYATGNSSRGSK 195
             A++GSN P     ++     DT  PP   P +NMS D+   T  ++     N S GSK
Sbjct: 148 SFADIGSNDPPGYDAVAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRNVSSGSK 207

Query: 196 RKRSGPNMHIAEAVREGMTSFTEQLKSITDWPDKKRATVAEFRDKIVSHLMEVPDLDNRK 255
           RKR G      + VR  +    EQL  I +WP  +R    + R +IV HL  +P+L    
Sbjct: 208 RKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMD 267

Query: 256 RVKLMDILFNNMKATKSFFSIPAPLKLEYCEYLLDKH 293
           R +LM IL  N+   K+F  +P  +K  YC  +L ++
Sbjct: 268 RCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLILQEN 301

[Close]

BLAST of Lag0011329 vs. NCBI nr
Match: KAA0048362.1 (retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 240.7 bits (613), Expect = 1.5e-59
Identity = 124/277 (44.77%), Postives = 168/277 (60.65%), Query Frame = 0


Query: 16  IHLGGWRSDNGTFRYGYQAQLEHLMREKLSGRDVPTQSCIESRVRTLKKQYQAIAEMMGP 75
           ++ GGWRSDNGTFR GY  QL  +M  K+ G ++   S I+SR++ +K+ + A+AEM GP
Sbjct: 24  VNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSNIHA-STIDSRIKLMKRMFHALAEMRGP 83

Query: 76  GCSGFGWNDEFKCIEAEKETFDLWVKTHPIAKGMLNKPFPHFEDLAYVFGKDRATGGVSE 135
            CSGFGWNDE KCI AEKE FD W  +HP AKG+LNK F H+++L+YVFGKDRATGG +E
Sbjct: 84  NCSGFGWNDEKKCIVAEKEVFDDW--SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAE 143

Query: 136 VMAEMGSNVPDDAVNLSGSLNNDTPIPPFTMPNVNMSEDEPRVTSDSQTYATGNSSRGSK 195
             A++GSN P     ++     DT  PP   P +NMS D+   T  ++     N S GSK
Sbjct: 144 SFADIGSNDPPGYDAVAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRNVSSGSK 203

Query: 196 RKRSGPNMHIAEAVREGMTSFTEQLKSITDWPDKKRATVAEFRDKIVSHLMEVPDLDNRK 255
           RKR G      + VR  +    EQL  I +WP  +R    + R +IV HL  +P+L    
Sbjct: 204 RKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMD 263

Query: 256 RVKLMDILFNNMKATKSFFSIPAPLKLEYCEYLLDKH 293
           R +LM IL  N+   K+F  +P  +K  YC  +L ++
Sbjct: 264 RCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLILQEN 297

[Close]

BLAST of Lag0011329 vs. NCBI nr
Match: KAA0057083.1 (retrotransposon protein [Cucumis melo var. makuwa] >TYK09001.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 239.2 bits (609), Expect = 4.5e-59
Identity = 124/277 (44.77%), Postives = 167/277 (60.29%), Query Frame = 0


Query: 16  IHLGGWRSDNGTFRYGYQAQLEHLMREKLSGRDVPTQSCIESRVRTLKKQYQAIAEMMGP 75
           ++ GGWRSDNGTFR GY  QL  +M  K+ G ++   S I+SR++ +K+ + A+AEM GP
Sbjct: 28  VNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSNIHA-STIDSRIKLMKRMFHALAEMRGP 87

Query: 76  GCSGFGWNDEFKCIEAEKETFDLWVKTHPIAKGMLNKPFPHFEDLAYVFGKDRATGGVSE 135
            CSGFGWNDE KCI AEKE FD W  +HP AKG+LNK F H+++L+YVFGKDRATGG +E
Sbjct: 88  NCSGFGWNDEKKCIVAEKEVFDDW--SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAE 147

Query: 136 VMAEMGSNVPDDAVNLSGSLNNDTPIPPFTMPNVNMSEDEPRVTSDSQTYATGNSSRGSK 195
             A++GSN P      +     DT  PP   P +NMS D+   T  ++     N S GSK
Sbjct: 148 SFADIGSNDPPGYDAEAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRNVSSGSK 207

Query: 196 RKRSGPNMHIAEAVREGMTSFTEQLKSITDWPDKKRATVAEFRDKIVSHLMEVPDLDNRK 255
           RKR G      + VR  +    EQL  I +WP  +R    + R +IV HL  +P+L    
Sbjct: 208 RKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMD 267

Query: 256 RVKLMDILFNNMKATKSFFSIPAPLKLEYCEYLLDKH 293
           R +LM IL  N+   K+F  +P  +K  YC  +L ++
Sbjct: 268 RCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLILQEN 301

[Close]

BLAST of Lag0011329 vs. NCBI nr
Match: KAA0038122.1 (retrotransposon protein [Cucumis melo var. makuwa] >KAA0047362.1 retrotransposon protein [Cucumis melo var. makuwa] >KAA0055248.1 retrotransposon protein [Cucumis melo var. makuwa] >TYJ97185.1 retrotransposon protein [Cucumis melo var. makuwa] >TYK00369.1 retrotransposon protein [Cucumis melo var. makuwa])

HSP 1 Score: 238.8 bits (608), Expect = 5.9e-59
Identity = 124/277 (44.77%), Postives = 167/277 (60.29%), Query Frame = 0


Query: 16  IHLGGWRSDNGTFRYGYQAQLEHLMREKLSGRDVPTQSCIESRVRTLKKQYQAIAEMMGP 75
           ++ GGWRSDNGTFR GY  QL  +M  K+ G ++   S I+SR++ +K+ + A+AEM GP
Sbjct: 28  VNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSNIHA-STIDSRIKLMKRMFHALAEMRGP 87

Query: 76  GCSGFGWNDEFKCIEAEKETFDLWVKTHPIAKGMLNKPFPHFEDLAYVFGKDRATGGVSE 135
            CSGFGWNDE KCI AEKE FD W  +HP AKG+LNK F H+++L+YVFGKDRATGG +E
Sbjct: 88  NCSGFGWNDEKKCIVAEKEVFDDW--SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAE 147

Query: 136 VMAEMGSNVPDDAVNLSGSLNNDTPIPPFTMPNVNMSEDEPRVTSDSQTYATGNSSRGSK 195
             A++GSN P      +     DT  PP   P +NMS D+   T  ++     N S GSK
Sbjct: 148 SFADIGSNDPPGYDAGAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRNVSSGSK 207

Query: 196 RKRSGPNMHIAEAVREGMTSFTEQLKSITDWPDKKRATVAEFRDKIVSHLMEVPDLDNRK 255
           RKR G      + VR  +    EQL  I +WP  +R    + R +IV HL  +P+L    
Sbjct: 208 RKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMD 267

Query: 256 RVKLMDILFNNMKATKSFFSIPAPLKLEYCEYLLDKH 293
           R +LM IL  N+   K+F  +P  +K  YC  +L ++
Sbjct: 268 RCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLILQEN 301

[Close]

BLAST of Lag0011329 vs. ExPASy TrEMBL
Match: A0A5A7U0H7 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold648G002060 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 9.8e-68
Identity = 137/274 (50.00%), Postives = 175/274 (63.87%), Query Frame = 0


Query: 19  GGWRSDNGTFRYGYQAQLEHLMREKLSGRDVPTQSCIESRVRTLKKQYQAIAEMMGPGCS 78
           GGWRSDNGTF+ GY AQL+ +M EKL G ++   S I+  V++LKK Y AIAEM GP CS
Sbjct: 31  GGWRSDNGTFQPGYLAQLQRMMAEKLPGTNIQESSTIDCHVKSLKKTYHAIAEMRGPSCS 90

Query: 79  GFGWNDEFKCIEAEKETFDLWVKTHPIAKGMLNKPFPHFEDLAYVFGKDRATGGVSEVMA 138
           GFGWN+EF+CI AE++ FD W+K+HP AKG+L+K FP+++DL+YVFGKDRATG  SE   
Sbjct: 91  GFGWNEEFQCIIAERDLFDSWIKSHPAAKGLLHKSFPYYDDLSYVFGKDRATGARSETFP 150

Query: 139 EMGSNVP---DDAVNLSGSLNNDTPIPPFTMPNVNMSEDEPRVTSDSQTYATGNSSRGSK 198
            +GSNV    +D + L  S  +D  IP      V+MS DE       Q     N S  SK
Sbjct: 151 NVGSNVSNMFNDTIPLGDS--HDEDIPTMYSQGVHMSPDEMFGIRAGQASERRNCSSVSK 210

Query: 199 RKRSGPNMHIAEAVREGMTSFTEQLKSITDWPDKKRATVAEFRDKIVSHLMEVPDLDNRK 258
           RKR        E +R  M    EQLK+I DWP +KRA   E R ++V  L ++P L ++ 
Sbjct: 211 RKRGSERYETVEVIRSVMEFGNEQLKAIADWPKEKRAMEVEMRAQVVKQLQDIPKLRSQD 270

Query: 259 RVKLMDILFNNMKATKSFFSIPAPLKLEYCEYLL 290
           R KLM ILF +++A + F SIP  LKLEYC  LL
Sbjct: 271 RAKLMQILFRSLEAIEGFLSIPTELKLEYCNILL 302

[Close]

BLAST of Lag0011329 vs. ExPASy TrEMBL
Match: A0A1S3B4L3 (uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 9.8e-68
Identity = 137/274 (50.00%), Postives = 175/274 (63.87%), Query Frame = 0


Query: 19  GGWRSDNGTFRYGYQAQLEHLMREKLSGRDVPTQSCIESRVRTLKKQYQAIAEMMGPGCS 78
           GGWRSDNGTF+ GY AQL+ +M EKL G ++   S I+  V++LKK Y AIAEM GP CS
Sbjct: 31  GGWRSDNGTFQPGYLAQLQRMMAEKLPGTNIQESSTIDCHVKSLKKTYHAIAEMRGPSCS 90

Query: 79  GFGWNDEFKCIEAEKETFDLWVKTHPIAKGMLNKPFPHFEDLAYVFGKDRATGGVSEVMA 138
           GFGWN+EF+CI AE++ FD W+K+HP AKG+L+K FP+++DL+YVFGKDRATG  SE   
Sbjct: 91  GFGWNEEFQCIIAERDLFDSWIKSHPAAKGLLHKSFPYYDDLSYVFGKDRATGARSETFP 150

Query: 139 EMGSNVP---DDAVNLSGSLNNDTPIPPFTMPNVNMSEDEPRVTSDSQTYATGNSSRGSK 198
            +GSNV    +D + L  S  +D  IP      V+MS DE       Q     N S  SK
Sbjct: 151 NVGSNVSNMFNDTIPLGDS--HDEDIPTMYSQGVHMSPDEMFGIRAGQASERRNCSSVSK 210

Query: 199 RKRSGPNMHIAEAVREGMTSFTEQLKSITDWPDKKRATVAEFRDKIVSHLMEVPDLDNRK 258
           RKR        E +R  M    EQLK+I DWP +KRA   E R ++V  L ++P L ++ 
Sbjct: 211 RKRGSERYETVEVIRSVMEFGNEQLKAIADWPKEKRAMEVEMRAQVVKQLQDIPKLRSQD 270

Query: 259 RVKLMDILFNNMKATKSFFSIPAPLKLEYCEYLL 290
           R KLM ILF +++A + F SIP  LKLEYC  LL
Sbjct: 271 RAKLMQILFRSLEAIEGFLSIPTELKLEYCNILL 302

[Close]

BLAST of Lag0011329 vs. ExPASy TrEMBL
Match: A0A5D3DPR5 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold259G00580 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 7.5e-60
Identity = 124/277 (44.77%), Postives = 168/277 (60.65%), Query Frame = 0


Query: 16  IHLGGWRSDNGTFRYGYQAQLEHLMREKLSGRDVPTQSCIESRVRTLKKQYQAIAEMMGP 75
           ++ GGWRSDNGTFR GY  QL  +M  K+ G ++   S I+SR++ +K+ + A+AEM GP
Sbjct: 28  VNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSNIHA-STIDSRIKLMKRMFHALAEMRGP 87

Query: 76  GCSGFGWNDEFKCIEAEKETFDLWVKTHPIAKGMLNKPFPHFEDLAYVFGKDRATGGVSE 135
            CSGFGWNDE KCI AEKE FD W  +HP AKG+LNK F H+++L+YVFGKDRATGG +E
Sbjct: 88  NCSGFGWNDEKKCIVAEKEVFDDW--SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAE 147

Query: 136 VMAEMGSNVPDDAVNLSGSLNNDTPIPPFTMPNVNMSEDEPRVTSDSQTYATGNSSRGSK 195
             A++GSN P     ++     DT  PP   P +NMS D+   T  ++     N S GSK
Sbjct: 148 SFADIGSNDPPGYDAVAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRNVSSGSK 207

Query: 196 RKRSGPNMHIAEAVREGMTSFTEQLKSITDWPDKKRATVAEFRDKIVSHLMEVPDLDNRK 255
           RKR G      + VR  +    EQL  I +WP  +R    + R +IV HL  +P+L    
Sbjct: 208 RKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMD 267

Query: 256 RVKLMDILFNNMKATKSFFSIPAPLKLEYCEYLLDKH 293
           R +LM IL  N+   K+F  +P  +K  YC  +L ++
Sbjct: 268 RCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLILQEN 301

[Close]

BLAST of Lag0011329 vs. ExPASy TrEMBL
Match: A0A5A7TXU5 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold264G00810 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 7.5e-60
Identity = 124/277 (44.77%), Postives = 168/277 (60.65%), Query Frame = 0


Query: 16  IHLGGWRSDNGTFRYGYQAQLEHLMREKLSGRDVPTQSCIESRVRTLKKQYQAIAEMMGP 75
           ++ GGWRSDNGTFR GY  QL  +M  K+ G ++   S I+SR++ +K+ + A+AEM GP
Sbjct: 24  VNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSNIHA-STIDSRIKLMKRMFHALAEMRGP 83

Query: 76  GCSGFGWNDEFKCIEAEKETFDLWVKTHPIAKGMLNKPFPHFEDLAYVFGKDRATGGVSE 135
            CSGFGWNDE KCI AEKE FD W  +HP AKG+LNK F H+++L+YVFGKDRATGG +E
Sbjct: 84  NCSGFGWNDEKKCIVAEKEVFDDW--SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAE 143

Query: 136 VMAEMGSNVPDDAVNLSGSLNNDTPIPPFTMPNVNMSEDEPRVTSDSQTYATGNSSRGSK 195
             A++GSN P     ++     DT  PP   P +NMS D+   T  ++     N S GSK
Sbjct: 144 SFADIGSNDPPGYDAVAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRNVSSGSK 203

Query: 196 RKRSGPNMHIAEAVREGMTSFTEQLKSITDWPDKKRATVAEFRDKIVSHLMEVPDLDNRK 255
           RKR G      + VR  +    EQL  I +WP  +R    + R +IV HL  +P+L    
Sbjct: 204 RKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMD 263

Query: 256 RVKLMDILFNNMKATKSFFSIPAPLKLEYCEYLLDKH 293
           R +LM IL  N+   K+F  +P  +K  YC  +L ++
Sbjct: 264 RCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLILQEN 297

[Close]

BLAST of Lag0011329 vs. ExPASy TrEMBL
Match: A0A5A7UME4 (Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold615G00290 PE=4 SV=1)

HSP 1 Score: 239.2 bits (609), Expect = 2.2e-59
Identity = 124/277 (44.77%), Postives = 167/277 (60.29%), Query Frame = 0


Query: 16  IHLGGWRSDNGTFRYGYQAQLEHLMREKLSGRDVPTQSCIESRVRTLKKQYQAIAEMMGP 75
           ++ GGWRSDNGTFR GY  QL  +M  K+ G ++   S I+SR++ +K+ + A+AEM GP
Sbjct: 28  VNAGGWRSDNGTFRPGYLNQLARMMAFKIPGSNIHA-STIDSRIKLMKRMFHALAEMRGP 87

Query: 76  GCSGFGWNDEFKCIEAEKETFDLWVKTHPIAKGMLNKPFPHFEDLAYVFGKDRATGGVSE 135
            CSGFGWNDE KCI AEKE FD W  +HP AKG+LNK F H+++L+YVFGKDRATGG +E
Sbjct: 88  NCSGFGWNDEKKCIVAEKEVFDDW--SHPAAKGLLNKSFVHYDELSYVFGKDRATGGRAE 147

Query: 136 VMAEMGSNVPDDAVNLSGSLNNDTPIPPFTMPNVNMSEDEPRVTSDSQTYATGNSSRGSK 195
             A++GSN P      +     DT  PP   P +NMS D+   T  ++     N S GSK
Sbjct: 148 SFADIGSNDPPGYDAEAADAMPDTDFPPMYSPGLNMSPDDLMETRTARVSERRNVSSGSK 207

Query: 196 RKRSGPNMHIAEAVREGMTSFTEQLKSITDWPDKKRATVAEFRDKIVSHLMEVPDLDNRK 255
           RKR G      + VR  +    EQL  I +WP  +R    + R +IV HL  +P+L    
Sbjct: 208 RKRPGHATDSGDIVRTAIEYGNEQLHRIAEWPILQRQDATQTRQEIVRHLEAIPELTLMD 267

Query: 256 RVKLMDILFNNMKATKSFFSIPAPLKLEYCEYLLDKH 293
           R +LM IL  N+   K+F  +P  +K  YC  +L ++
Sbjct: 268 RCRLMRILMRNVDDMKAFLEVPDHMKYPYCSLILQEN 301

[Close]

BLAST of Lag0011329 vs. TAIR 10
Match: AT1G30140.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G27260.1); Has 313 Blast hits to 256 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 8; Plants - 295; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). )

HSP 1 Score: 57.8 bits (138), Expect = 1.7e-08
Identity = 31/83 (37.35%), Postives = 45/83 (54.22%), Query Frame = 0


Query: 57  SRVRTLKKQYQAIAEMMGPGCSGFGWNDEFKCIEAEKETFDLWVKTHPIAKGMLNKPFPH 116
           SR++ LK  YQ+  ++     SGFGW+ E K   A  E +  ++K HP  K M  +   H
Sbjct: 68  SRLKFLKNLYQSYLDLK-RFSSGFGWDPETKKFTAPDEVWRDYLKAHPNHKHMQTESIDH 127

Query: 117 FEDLAYVFGKDRATGGVSEVMAE 140
           FEDL  +FG   ATG  +  M++
Sbjct: 128 FEDLQIIFGDVVATGSFAVGMSD 149

[Close]

BLAST of Lag0011329 vs. TAIR 10
Match: AT2G24960.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 1453 Blast hits to 509 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 39; Plants - 1363; Viruses - 0; Other Eukaryotes - 50 (source: NCBI BLink). )

HSP 1 Score: 42.0 bits (97), Expect = 9.8e-04
Identity = 24/93 (25.81%), Postives = 41/93 (44.09%), Query Frame = 0


Query: 55  IESRVRTLKKQYQAIAEMMGPGCSGFGWNDEFKCIEAEKETFDLWVKTHPIAKGMLNKPF 114
           +  R   L K Y+ +  ++     GF W++    I A+   +D ++K HP+A+    K  
Sbjct: 223 LRHRYNKLLKYYKDMEAILKE--DGFSWDETRLMISADDAVWDSYIKDHPLARTYRMKSL 282

Query: 115 PHFEDLAYVFGKDRATGGVSEVMAEMGSNVPDD 148
           P + DL  +F             AE G++  DD
Sbjct: 283 PSYNDLDTIFA----------CQAEQGTDHRDD 303

[Close]

BLAST of Lag0011329 vs. TAIR 10
Match: AT2G24960.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 42.0 bits (97), Expect = 9.8e-04
Identity = 24/93 (25.81%), Postives = 41/93 (44.09%), Query Frame = 0


Query: 55  IESRVRTLKKQYQAIAEMMGPGCSGFGWNDEFKCIEAEKETFDLWVKTHPIAKGMLNKPF 114
           +  R   L K Y+ +  ++     GF W++    I A+   +D ++K HP+A+    K  
Sbjct: 223 LRHRYNKLLKYYKDMEAILKE--DGFSWDETRLMISADDAVWDSYIKDHPLARTYRMKSL 282

Query: 115 PHFEDLAYVFGKDRATGGVSEVMAEMGSNVPDD 148
           P + DL  +F             AE G++  DD
Sbjct: 283 PSYNDLDTIFA----------CQAEQGTDHRDD 303

The following BLAST results are available for this feature:

BLAST of Lag0011329 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008441954.1	2.0e-67	50.00	PREDICTED: uncharacterized protein LOC103485953 [Cucumis melo] >KAA0047736.1 ret...	[more]
KAA0035621.1	1.5e-59	44.77	retrotransposon protein [Cucumis melo var. makuwa] >KAA0041647.1 retrotransposon...	[more]
KAA0048362.1	1.5e-59	44.77	retrotransposon protein [Cucumis melo var. makuwa]	[more]
KAA0057083.1	4.5e-59	44.77	retrotransposon protein [Cucumis melo var. makuwa] >TYK09001.1 retrotransposon p...	[more]
KAA0038122.1	5.9e-59	44.77	retrotransposon protein [Cucumis melo var. makuwa] >KAA0047362.1 retrotransposon...	[more]

BLAST of Lag0011329 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0011329 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U0H7	9.8e-68	50.00	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B4L3	9.8e-68	50.00	uncharacterized protein LOC103485953 OS=Cucumis melo OX=3656 GN=LOC103485953 PE=...	[more]
A0A5D3DPR5	7.5e-60	44.77	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7TXU5	7.5e-60	44.77	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5A7UME4	2.2e-59	44.77	Retrotransposon protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Lag0011329 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G30140.1	1.7e-08	37.35	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G24960.1	9.8e-04	25.81	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G24960.2	9.8e-04	25.81	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..202
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..196
None	No IPR available	PANTHER	PTHR46250	MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED	coord: 18..291

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0011329.1	Lag0011329.1	mRNA