Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGACGAAACCCTAAGCGATGCATGGGAACGTTTTAAGAGTTTGTTGCAAAGATGTCTAGACCATGGATTGCCCCATTGTATTCAACTAGAAATATTGTACGTTGGACTGAATAAGAACTCCAAATTTTTTTTGACCCATCTGCTAAAGATACATTGTTAAGTAAAACAAATGATGAAGCGCATGCAATCCTTGATTGCATCGCACGAAACAACTATGAGTGGGGCACCACAGAGGACAAAAAGAAACGTCCAGTGAAGACCAGTTCAGGAGGTTATGAAATAGACTCGTTGACCGCAGTGAATGCAAAGATTGATGCATTAAGTACAAAGATGGATGCGTTGACAGCAAGCACGACTCCTCTCATAGCGCAACTCAACGTAGTAGAATGCAAAATCTGCGGAGAAGGACATGTGCAGGATCAGTGTCCTTCTAACCCAGAATCGGTGTTCTATGTGGGACCTCAAGGTTATGCATGCAACAATCCATTTTCAAATACATACAAACCTGGATGGAGAAATCACCCCAACTTCTCATGGAATGGCGATGCGGCCAAACAAACGCAACAAGGTAACGTAAATCCTGTCCCTAGACAGTTTGATACTAACAATGAACGCACAACGCAGGGACACTTCCAGCGCAATCACAGTGCAAGCGGGGGTGACCAAGGTGCATCATCATCAAATTCGTTGGAAGCAATGATGAAAGAGTTCATGGCAAGTCAGAAGGAATATATGGCAAAAAGGATGCGGTAG
mRNA sequence
ATGGAAGACGAAACCCTAAGCGATGCATGGGAACGTTTTAAGAGTTTGTTGCAAAGATGTCTAGACCATGGATTGCCCCATTATACATTGTTAAGTAAAACAAATGATGAAGCGCATGCAATCCTTGATTGCATCGCACGAAACAACTATGAGTGGGGCACCACAGAGGACAAAAAGAAACGTCCAGTGAAGACCAGTTCAGGAGGTTATGAAATAGACTCGTTGACCGCAGTGAATGCAAAGATTGATGCATTAAGTACAAAGATGGATGCGTTGACAGCAAGCACGACTCCTCTCATAGCGCAACTCAACGTAGTAGAATGCAAAATCTGCGGAGAAGGACATGTGCAGGATCAGTGTCCTTCTAACCCAGAATCGGTGTTCTATGTGGGACCTCAAGGTTATGCATGCAACAATCCATTTTCAAATACATACAAACCTGGATGGAGAAATCACCCCAACTTCTCATGGAATGGCGATGCGGCCAAACAAACGCAACAAGGTAACGTAAATCCTGTCCCTAGACAGTTTGATACTAACAATGAACGCACAACGCAGGGACACTTCCAGCGCAATCACAGTGCAAGCGGGGGTGACCAAGGTGCATCATCATCAAATTCGTTGGAAGCAATGATGAAAGAGTTCATGGCAAGTCAGAAGGAATATATGGCAAAAAGGATGCGGTAG
Coding sequence (CDS)
ATGGAAGACGAAACCCTAAGCGATGCATGGGAACGTTTTAAGAGTTTGTTGCAAAGATGTCTAGACCATGGATTGCCCCATTATACATTGTTAAGTAAAACAAATGATGAAGCGCATGCAATCCTTGATTGCATCGCACGAAACAACTATGAGTGGGGCACCACAGAGGACAAAAAGAAACGTCCAGTGAAGACCAGTTCAGGAGGTTATGAAATAGACTCGTTGACCGCAGTGAATGCAAAGATTGATGCATTAAGTACAAAGATGGATGCGTTGACAGCAAGCACGACTCCTCTCATAGCGCAACTCAACGTAGTAGAATGCAAAATCTGCGGAGAAGGACATGTGCAGGATCAGTGTCCTTCTAACCCAGAATCGGTGTTCTATGTGGGACCTCAAGGTTATGCATGCAACAATCCATTTTCAAATACATACAAACCTGGATGGAGAAATCACCCCAACTTCTCATGGAATGGCGATGCGGCCAAACAAACGCAACAAGGTAACGTAAATCCTGTCCCTAGACAGTTTGATACTAACAATGAACGCACAACGCAGGGACACTTCCAGCGCAATCACAGTGCAAGCGGGGGTGACCAAGGTGCATCATCATCAAATTCGTTGGAAGCAATGATGAAAGAGTTCATGGCAAGTCAGAAGGAATATATGGCAAAAAGGATGCGGTAG
Protein sequence
MEDETLSDAWERFKSLLQRCLDHGLPHYTLLSKTNDEAHAILDCIARNNYEWGTTEDKKKRPVKTSSGGYEIDSLTAVNAKIDALSTKMDALTASTTPLIAQLNVVECKICGEGHVQDQCPSNPESVFYVGPQGYACNNPFSNTYKPGWRNHPNFSWNGDAAKQTQQGNVNPVPRQFDTNNERTTQGHFQRNHSASGGDQGASSSNSLEAMMKEFMASQKEYMAKRMR
Homology
BLAST of Lag0011327 vs. NCBI nr
Match:
XP_022926214.1 (uncharacterized protein LOC111433394 [Cucurbita moschata])
HSP 1 Score: 154.1 bits (388), Expect = 1.5e-33
Identity = 96/254 (37.80%), Postives = 130/254 (51.18%), Query Frame = 0
Query: 2 EDETLSDAWERFKSLLQRCLDHGLPHY------------------------TLLSKTNDE 61
ED+TLS+AWERFK +L++C HGLPH +LSKT +E
Sbjct: 184 EDDTLSEAWERFKEMLRKCPHHGLPHCIQMETFYNGLNIATKQVVDASANGAILSKTYNE 243
Query: 62 AHAILDCIARNNYEWGTTEDKKKRPVKTSSGGYEIDSLTAVNAKIDALSTKMDALT---- 121
A+ IL+ IA NN +W D + P + + G E+D+L+++NA++ +++ + L
Sbjct: 244 AYEILERIASNNCQWA---DVRSNPGRKTRGVLEVDALSSINAQLASVTNILQNLALGQD 303
Query: 122 ------ASTTPLIAQLNVVECKICGEGHVQDQCPSNPESVFYVG---PQGYACNNPFSNT 181
T +I Q C CGE H DQCPSNP S+FYVG QG NNPFSNT
Sbjct: 304 SMIKAPVHTVAVINQTAAESCVYCGEEHTFDQCPSNPASIFYVGNQASQGNPKNNPFSNT 363
Query: 182 YKPGWRNHPNFSWNGDAAKQTQQGNVNPVPRQFDTNNERTTQGHFQRNHSASGGDQGA-S 218
Y PGWRNHPNFSW G + Q P F N+ Q N G Q +
Sbjct: 364 YNPGWRNHPNFSWKGQGSYNQQMPPKANYPPGFGLQNQLAYSSQ-QVNTQGKGIPQAQYT 423
BLAST of Lag0011327 vs. NCBI nr
Match:
XP_022929949.1 (uncharacterized protein LOC111436411 [Cucurbita moschata])
HSP 1 Score: 152.1 bits (383), Expect = 5.6e-33
Identity = 97/254 (38.19%), Postives = 129/254 (50.79%), Query Frame = 0
Query: 2 EDETLSDAWERFKSLLQRCLDHGLPHY------------------------TLLSKTNDE 61
EDETLS+A ERFK +L++C HGLPH +LSKT +E
Sbjct: 213 EDETLSEACERFKEMLRKCPHHGLPHCIQMETFYNGLNIVTKQVVDASANGAILSKTYNE 272
Query: 62 AHAILDCIARNNYEWGTTEDKKKRPVKTSSGGYEIDSLTAVNAKIDALSTKMDALT---- 121
A+ IL+ IA NN +W D + P + + G E+D+L+++NA++ +++ + L
Sbjct: 273 AYEILERIASNNCQWA---DVRSNPGRKTRGVLEVDALSSINAQLASVTNILQNLALGQD 332
Query: 122 ------ASTTPLIAQLNVVECKICGEGHVQDQCPSNPESVFYVG---PQGYACNNPFSNT 181
T I Q C CGE H DQCPSNP S+FYVG QG NNPFSNT
Sbjct: 333 SMIKAPVHTAAAINQTAAESCVYCGEEHTFDQCPSNPASIFYVGNQASQGNLKNNPFSNT 392
Query: 182 YKPGWRNHPNFSWNGDAAKQTQQGNVNPVPRQFDTNNERTTQGHFQRNHSASGGDQGA-S 218
Y PGWRNHPNFSW G + Q P F N+ Q N G Q +
Sbjct: 393 YNPGWRNHPNFSWKGQSLYNQQMPPKANYPSGFRLQNQLAYSSQ-QVNTQGKGTTQAQYT 452
BLAST of Lag0011327 vs. NCBI nr
Match:
XP_030509259.1 (uncharacterized protein LOC115723937 [Cannabis sativa])
HSP 1 Score: 146.0 bits (367), Expect = 4.0e-31
Identity = 93/248 (37.50%), Postives = 130/248 (52.42%), Query Frame = 0
Query: 1 MEDETLSDAWERFKSLLQRCLDHGLPHY------------------------TLLSKTND 60
+EDET SDAWERFK LL++C HG+PH +LSK+ +
Sbjct: 166 LEDETTSDAWERFKELLRKCPHHGIPHCIQLETFYNGLNAASRMVLDASANGAILSKSYN 225
Query: 61 EAHAILDCIARNNYEWGTTEDKKKRPVKTSSGGYEIDSLTAVNAKIDALST--KMDALTA 120
EA IL+ IA NNY+W T R V +G E+D+LTA+ A++ +++ K +
Sbjct: 226 EAFEILERIASNNYQWSTNRAPTSRKV---AGVLEVDALTALTAQMASMTNILKNMNMGG 285
Query: 121 STTPLIA-QLNVVECKICGEGHVQDQCPSNPESVFYVGPQGY-ACNNPFSNTYKPGWRNH 180
S P A Q + C CG+GH + CPSNP SV YVG Q + NNP+SN+Y P W++H
Sbjct: 286 SVQPAAAIQRAEISCVYCGDGHTFENCPSNPASVCYVGNQNFNRNNNPYSNSYNPAWKHH 345
Query: 181 PNFSWNGDAAKQT---QQGNVNPVPRQFDTNNERTTQGHFQRNHSASGGDQGASSSNSLE 218
PNFSW G A + Q P F + Q Q+ H G S ++SLE
Sbjct: 346 PNFSWGGQGASSSGAQQAQGKQSFPPGF------SQQPRPQQPHQPQG-----SQTSSLE 399
BLAST of Lag0011327 vs. NCBI nr
Match:
XP_022960432.1 (uncharacterized protein LOC111461168 [Cucurbita moschata])
HSP 1 Score: 146.0 bits (367), Expect = 4.0e-31
Identity = 80/198 (40.40%), Postives = 106/198 (53.54%), Query Frame = 0
Query: 2 EDETLSDAWERFKSLLQRCLDHGLPHY------------------------TLLSKTNDE 61
EDETLS+AWERFK +L++C HGLPH +LSKT +E
Sbjct: 175 EDETLSEAWERFKEMLRKCPHHGLPHCIQMETFYNGLNIATKQVVDASANGAMLSKTYNE 234
Query: 62 AHAILDCIARNNYEWGTTEDKKKRPVKTSSGGYEIDSLTAVNAKIDALSTKMDALT---- 121
A+ IL+ IA NN +W D + P K + G E+D+L+++NA++ +++ + L
Sbjct: 235 AYEILERIASNNCQWA---DVRSNPGKKTRGVLEVDALSSINAQLASVTNILQNLAFGQG 294
Query: 122 ------ASTTPLIAQLNVVECKICGEGHVQDQCPSNPESVFYV---GPQGYACNNPFSNT 163
A T ++ Q C CGE H DQCP NP S+ YV QG NNP SNT
Sbjct: 295 TMIKAPAHTAAVMTQTATESCVYCGEEHTFDQCPRNPASILYVRNQASQGNQKNNPSSNT 354
BLAST of Lag0011327 vs. NCBI nr
Match:
XP_030510138.1 (uncharacterized protein LOC115724905 [Cannabis sativa])
HSP 1 Score: 145.2 bits (365), Expect = 6.9e-31
Identity = 92/246 (37.40%), Postives = 129/246 (52.44%), Query Frame = 0
Query: 1 MEDETLSDAWERFKSLLQRCLDHGLPHY------------------------TLLSKTND 60
+EDET SDAWERFK LL++C HG+PH +LSK+ +
Sbjct: 125 LEDETTSDAWERFKELLRKCPHHGIPHCIQLETFYNGLNAASRMVLDASANGAILSKSYN 184
Query: 61 EAHAILDCIARNNYEWGTTEDKKKRPVKTSSGGYEIDSLTAVNAKIDALST--KMDALTA 120
EA IL+ IA NNY+W T R V +G E+D+LTA+ A++ +++ K +
Sbjct: 185 EAFEILERIASNNYQWSTNRAPTSRKV---AGVLEVDALTALTAQMASMTNILKNMNMGG 244
Query: 121 STTPLIA-QLNVVECKICGEGHVQDQCPSNPESVFYVGPQGY-ACNNPFSNTYKPGWRNH 180
S P A Q + C CG+GH + CPSNP SV YVG Q + NNP+SN+Y P W++H
Sbjct: 245 SVQPAAAIQRAEISCVYCGDGHTFENCPSNPASVCYVGNQNFNRNNNPYSNSYNPAWKHH 304
Query: 181 PNFSWNGDAAKQT-QQGNVNPVPRQFDTNNERTTQGHFQRNHSASGGDQGASSSNSLEAM 218
PNFSW G A + QG + G Q+ H G S ++SLE++
Sbjct: 305 PNFSWGGQGASSSGAQGQ----------GKQSFPPGFSQQPHQPQG-----SQTSSLESL 352
BLAST of Lag0011327 vs. ExPASy TrEMBL
Match:
A0A6J1EEI2 (uncharacterized protein LOC111433394 OS=Cucurbita moschata OX=3662 GN=LOC111433394 PE=4 SV=1)
HSP 1 Score: 154.1 bits (388), Expect = 7.2e-34
Identity = 96/254 (37.80%), Postives = 130/254 (51.18%), Query Frame = 0
Query: 2 EDETLSDAWERFKSLLQRCLDHGLPHY------------------------TLLSKTNDE 61
ED+TLS+AWERFK +L++C HGLPH +LSKT +E
Sbjct: 184 EDDTLSEAWERFKEMLRKCPHHGLPHCIQMETFYNGLNIATKQVVDASANGAILSKTYNE 243
Query: 62 AHAILDCIARNNYEWGTTEDKKKRPVKTSSGGYEIDSLTAVNAKIDALSTKMDALT---- 121
A+ IL+ IA NN +W D + P + + G E+D+L+++NA++ +++ + L
Sbjct: 244 AYEILERIASNNCQWA---DVRSNPGRKTRGVLEVDALSSINAQLASVTNILQNLALGQD 303
Query: 122 ------ASTTPLIAQLNVVECKICGEGHVQDQCPSNPESVFYVG---PQGYACNNPFSNT 181
T +I Q C CGE H DQCPSNP S+FYVG QG NNPFSNT
Sbjct: 304 SMIKAPVHTVAVINQTAAESCVYCGEEHTFDQCPSNPASIFYVGNQASQGNPKNNPFSNT 363
Query: 182 YKPGWRNHPNFSWNGDAAKQTQQGNVNPVPRQFDTNNERTTQGHFQRNHSASGGDQGA-S 218
Y PGWRNHPNFSW G + Q P F N+ Q N G Q +
Sbjct: 364 YNPGWRNHPNFSWKGQGSYNQQMPPKANYPPGFGLQNQLAYSSQ-QVNTQGKGIPQAQYT 423
BLAST of Lag0011327 vs. ExPASy TrEMBL
Match:
A0A6J1EQ90 (uncharacterized protein LOC111436411 OS=Cucurbita moschata OX=3662 GN=LOC111436411 PE=4 SV=1)
HSP 1 Score: 152.1 bits (383), Expect = 2.7e-33
Identity = 97/254 (38.19%), Postives = 129/254 (50.79%), Query Frame = 0
Query: 2 EDETLSDAWERFKSLLQRCLDHGLPHY------------------------TLLSKTNDE 61
EDETLS+A ERFK +L++C HGLPH +LSKT +E
Sbjct: 213 EDETLSEACERFKEMLRKCPHHGLPHCIQMETFYNGLNIVTKQVVDASANGAILSKTYNE 272
Query: 62 AHAILDCIARNNYEWGTTEDKKKRPVKTSSGGYEIDSLTAVNAKIDALSTKMDALT---- 121
A+ IL+ IA NN +W D + P + + G E+D+L+++NA++ +++ + L
Sbjct: 273 AYEILERIASNNCQWA---DVRSNPGRKTRGVLEVDALSSINAQLASVTNILQNLALGQD 332
Query: 122 ------ASTTPLIAQLNVVECKICGEGHVQDQCPSNPESVFYVG---PQGYACNNPFSNT 181
T I Q C CGE H DQCPSNP S+FYVG QG NNPFSNT
Sbjct: 333 SMIKAPVHTAAAINQTAAESCVYCGEEHTFDQCPSNPASIFYVGNQASQGNLKNNPFSNT 392
Query: 182 YKPGWRNHPNFSWNGDAAKQTQQGNVNPVPRQFDTNNERTTQGHFQRNHSASGGDQGA-S 218
Y PGWRNHPNFSW G + Q P F N+ Q N G Q +
Sbjct: 393 YNPGWRNHPNFSWKGQSLYNQQMPPKANYPSGFRLQNQLAYSSQ-QVNTQGKGTTQAQYT 452
BLAST of Lag0011327 vs. ExPASy TrEMBL
Match:
A0A6J1H7E4 (uncharacterized protein LOC111461168 OS=Cucurbita moschata OX=3662 GN=LOC111461168 PE=4 SV=1)
HSP 1 Score: 146.0 bits (367), Expect = 2.0e-31
Identity = 80/198 (40.40%), Postives = 106/198 (53.54%), Query Frame = 0
Query: 2 EDETLSDAWERFKSLLQRCLDHGLPHY------------------------TLLSKTNDE 61
EDETLS+AWERFK +L++C HGLPH +LSKT +E
Sbjct: 175 EDETLSEAWERFKEMLRKCPHHGLPHCIQMETFYNGLNIATKQVVDASANGAMLSKTYNE 234
Query: 62 AHAILDCIARNNYEWGTTEDKKKRPVKTSSGGYEIDSLTAVNAKIDALSTKMDALT---- 121
A+ IL+ IA NN +W D + P K + G E+D+L+++NA++ +++ + L
Sbjct: 235 AYEILERIASNNCQWA---DVRSNPGKKTRGVLEVDALSSINAQLASVTNILQNLAFGQG 294
Query: 122 ------ASTTPLIAQLNVVECKICGEGHVQDQCPSNPESVFYV---GPQGYACNNPFSNT 163
A T ++ Q C CGE H DQCP NP S+ YV QG NNP SNT
Sbjct: 295 TMIKAPAHTAAVMTQTATESCVYCGEEHTFDQCPRNPASILYVRNQASQGNQKNNPSSNT 354
BLAST of Lag0011327 vs. ExPASy TrEMBL
Match:
A0A6J0ZYV0 (uncharacterized protein LOC110413413 OS=Herrania umbratica OX=108875 GN=LOC110413413 PE=4 SV=1)
HSP 1 Score: 139.4 bits (350), Expect = 1.8e-29
Identity = 77/197 (39.09%), Postives = 107/197 (54.31%), Query Frame = 0
Query: 2 EDETLSDAWERFKSLLQRCLDHGLPHY------------------------TLLSKTNDE 61
+ E+L +AWERFK LL+RC HG+P + L+SK +
Sbjct: 191 DGESLYEAWERFKELLRRCPHHGIPDWLQVQTFYNGLVGSIKTIIDAAAGGALMSKNAVD 250
Query: 62 AHAILDCIARNNYEWGTTEDKKKRPVKTSSGGYEIDSLTAVNAKIDALSTKMDALTASTT 121
A+ +L+ +A NNY+W + ++ V G YEID+L + ++ ALS K+D L
Sbjct: 251 AYNLLEEMASNNYQWPSERSGSRKAV----GAYEIDALGTLTTQVAALSKKLDTLGVHA- 310
Query: 122 PLIAQLNVVECKICGEGHVQDQCPSNPESVFYVGPQGYACNNPFSNTYKPGWRNHPNFSW 175
Q ++V C++CG+ H DQCP N ESV +VG NNP+SNTY PGWRNHPNFSW
Sbjct: 311 ---VQNSLVVCEMCGDSHSYDQCPYNSESVQFVGNFNRQQNNPYSNTYNPGWRNHPNFSW 370
BLAST of Lag0011327 vs. ExPASy TrEMBL
Match:
A0A6J0ZX64 (LOW QUALITY PROTEIN: uncharacterized protein LOC110412945 OS=Herrania umbratica OX=108875 GN=LOC110412945 PE=4 SV=1)
HSP 1 Score: 139.4 bits (350), Expect = 1.8e-29
Identity = 77/197 (39.09%), Postives = 107/197 (54.31%), Query Frame = 0
Query: 2 EDETLSDAWERFKSLLQRCLDHGLPHY------------------------TLLSKTNDE 61
+ E+L +AWERFK LL+RC HG+P + L+SK +
Sbjct: 191 DGESLYEAWERFKELLRRCPHHGIPDWLQVQTFYNGLVGSIKTIIDAAAGGALMSKNAVD 250
Query: 62 AHAILDCIARNNYEWGTTEDKKKRPVKTSSGGYEIDSLTAVNAKIDALSTKMDALTASTT 121
A+ +L+ +A NNY+W + ++ V G YEID+L + ++ ALS K+D L
Sbjct: 251 AYNLLEEMASNNYQWPSERSGSRKAV----GAYEIDALGTLTTQVAALSKKLDTLGVHA- 310
Query: 122 PLIAQLNVVECKICGEGHVQDQCPSNPESVFYVGPQGYACNNPFSNTYKPGWRNHPNFSW 175
Q ++V C++CG+ H DQCP N ESV +VG NNP+SNTY PGWRNHPNFSW
Sbjct: 311 ---VQNSLVVCEMCGDSHSYDQCPYNSESVQFVGNFNRQQNNPYSNTYNPGWRNHPNFSW 370
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1EEI2 | 7.2e-34 | 37.80 | uncharacterized protein LOC111433394 OS=Cucurbita moschata OX=3662 GN=LOC1114333... | [more] |
A0A6J1EQ90 | 2.7e-33 | 38.19 | uncharacterized protein LOC111436411 OS=Cucurbita moschata OX=3662 GN=LOC1114364... | [more] |
A0A6J1H7E4 | 2.0e-31 | 40.40 | uncharacterized protein LOC111461168 OS=Cucurbita moschata OX=3662 GN=LOC1114611... | [more] |
A0A6J0ZYV0 | 1.8e-29 | 39.09 | uncharacterized protein LOC110413413 OS=Herrania umbratica OX=108875 GN=LOC11041... | [more] |
A0A6J0ZX64 | 1.8e-29 | 39.09 | LOW QUALITY PROTEIN: uncharacterized protein LOC110412945 OS=Herrania umbratica ... | [more] |
Match Name | E-value | Identity | Description | |