
Lag0011325 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTGGATTACCATCTTATCAGCTCCACCACGAAGCTCTGAAAAATGTTTTCGACGCCCGCATGGAAGATGGGTATCCTATTCGGGAACACGTTCTCAACATGACGAACCAATTCAACATTGTGGAGTCTAATGGGGGGGTCGTTTGCGAGAGGAATCAGGTTGCGTTCATATTGCATTCGCTTCCACCCAACTTTATGCAATTTCGAACGAATGCGAGTATGAATAAGATTCAATTTAACCTGACCATCCTTCTAAATGAGCTATAGGTTTATGAGTCCATGCTTAAAAGCAAGGGCCAGAATGCAGTGAAAGGAAAGGCCAATGTGGCCCATTACAAAAAGAAGTTCCTGAAGGATTCATCCTTAGGAACAAAACCTGTACCTCAAGCTTTTTGATCGAAGCAAATTCAGAAGAAGAAGGGTGACAATGGGAAGGCTCCTGCTAAGGTTGTACTGGACAAGAGAAAGGCCAAGGTCGTGGCCGATAAGGGCAAGTGCTTCCACTGCAATGTGGATAGTCACTGGAAGAGGAACTGCCCTCGTTACGTTGCTGAGGATAAGAGAGAAAATGAAGATAAATATGATTTACTTGTTTTATAA ATGTTTGGATTACCATCTTATCAGCTCCACCACGAAGCTCTGAAAAATGTTTTCGACGCCCGCATGGAAGATGGGTATCCTATTCGGGAACACGTTCTCAACATGACGAACCAATTCAACATTGTGGAGTCTAATGGGGGGGTCGTTTGCGAGAGGAATCAGAAGAAGAAGGGTGACAATGGGAAGGCTCCTGCTAAGGTTGTACTGGACAAGAGAAAGGCCAAGGTCGTGGCCGATAAGGGCAAGTGCTTCCACTGCAATGTGGATAGTCACTGGAAGAGGAACTGCCCTCGTTACGTTGCTGAGGATAAGAGAGAAAATGAAGATAAATATGATTTACTTGTTTTATAA ATGTTTGGATTACCATCTTATCAGCTCCACCACGAAGCTCTGAAAAATGTTTTCGACGCCCGCATGGAAGATGGGTATCCTATTCGGGAACACGTTCTCAACATGACGAACCAATTCAACATTGTGGAGTCTAATGGGGGGGTCGTTTGCGAGAGGAATCAGAAGAAGAAGGGTGACAATGGGAAGGCTCCTGCTAAGGTTGTACTGGACAAGAGAAAGGCCAAGGTCGTGGCCGATAAGGGCAAGTGCTTCCACTGCAATGTGGATAGTCACTGGAAGAGGAACTGCCCTCGTTACGTTGCTGAGGATAAGAGAGAAAATGAAGATAAATATGATTTACTTGTTTTATAA MFGLPSYQLHHEALKNVFDARMEDGYPIREHVLNMTNQFNIVESNGGVVCERNQKKKGDNGKAPAKVVLDKRKAKVVADKGKCFHCNVDSHWKRNCPRYVAEDKRENEDKYDLLVL Homology
BLAST of Lag0011325 vs. NCBI nr
Match: KAA0042123.1 (gag/pol protein [Cucumis melo var. makuwa] >TYK18066.1 gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 113.2 bits (282), Expect = 1.5e-21 Identity = 62/143 (43.36%), Postives = 78/143 (54.55%), Query Frame = 0
BLAST of Lag0011325 vs. NCBI nr
Match: KAA0032339.1 (gag/pol protein [Cucumis melo var. makuwa] >TYK19043.1 gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 109.8 bits (273), Expect = 1.6e-20 Identity = 59/116 (50.86%), Postives = 75/116 (64.66%), Query Frame = 0
BLAST of Lag0011325 vs. NCBI nr
Match: KAA0041279.1 (gag/pol protein [Cucumis melo var. makuwa] >TYK16077.1 gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 107.8 bits (268), Expect = 6.2e-20 Identity = 64/154 (41.56%), Postives = 82/154 (53.25%), Query Frame = 0
BLAST of Lag0011325 vs. NCBI nr
Match: KAA0041208.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 105.1 bits (261), Expect = 4.0e-19 Identity = 54/106 (50.94%), Postives = 69/106 (65.09%), Query Frame = 0
BLAST of Lag0011325 vs. NCBI nr
Match: KAA0058181.1 (gag/pol protein [Cucumis melo var. makuwa]) HSP 1 Score: 102.4 bits (254), Expect = 2.6e-18 Identity = 49/108 (45.37%), Postives = 64/108 (59.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|