Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAGACTTCGTGACCAAAGTTATAACCCAGTACAAGTGGCAAGAGTTCTGTGCTCTCCCTCAGGAGGCAGTGGTGCCTTTAGTTCGAGAATTCTACGTTGAACTGAGGGAAGAGAGCATGAGCATGTCAGTGGTGAGAGGTAAAATGGTTAGTTTCTCTTCTGTTGACATTAACAGGGTGTACAGGATCAAAGCACCCTTACATCCAAGAGGGAATGATGCCATCAAGAACCCCTCGCCCAAGCAGATGAAAGAAGCACTGAAATTAGTGGCCAAAAGGGAGTTTAATGGAAGGAGTCCCATACAAAGGTGAAGACATTAGTGTCAAGCGATCTCAAGCCTGAATCAGTAGTGTGGCTTCACTTTATAAAGAACAGGTTAATGCCAACAACCCACGACAACACTATTTCCGTAGAGAGAGTTATGCTCCTCTACAGTATCTTGAAGGGTTGGAGATAAATACTGGGAGCATCATCAAGGAGGAGATCCTTTCATGTGGAAGGAAGAAAGTAGGGAAGCTGTTCTTTGGATCACTTATCACCCAATTATGTCAGAGGGTAAAGATAGTTCCTGGAAAGGATGAAGAGCGCCACATATTCAGGCCTACCATTGATTTACCTCTGATTGGGAAGCTCTAACAGAACAATGCTCAAAGGAAGGGCAAAGCTTCCACATCTCAAGCCACTCCACTACCAGGGCTAACACCTACTTCACCTCCTCAACATACTCCAGTTTCAGGACCCACACCATCATCAGAGACCGTTGCATTTGCCTTCCAACAGCTAGATAGAATTGAAGACAAGCTGAAGGCTTACTGGGTCTATGCCAAGGAGAGAGATGAAACTATTAGAGAGTTCTACCTCTCTATCGCCCCCAGCATCGCCCCGTGTTCCCTGACTTCCCTCAATCACTGCTGCCCAAGAAGAAAAAGAATTTGA
mRNA sequence
ATGCCAGACTTCGTGACCAAAGTTATAACCCAGTACAAGTGGCAAGAGTTCTGTGCTCTCCCTCAGGAGGCAGTGGTGCCTTTAGTTCGAGAATTCTACGTTGAACTGAGGGAAGAGAGCATGAGCATGTCAGTGGTGAGAGGTAAAATGGTTAGTTTCTCTTCTGTTGACATTAACAGGGTGTACAGGATCAAAGCACCCTTACATCCAAGAGGGAATGATGCCATCAAGAACCCCTCGCCCAAGCAGATGAAAGAAGCACTGAAATTAGTGGCCAAAAGGGAGTTTAATGGAAGGAGTCCCATACAAAGAGAGAGTTATGCTCCTCTACAGTATCTTGAAGGGTTGGAGATAAATACTGGGAGCATCATCAAGGAGGAGATCCTTTCATGTGGAAGGAAGAAAGTAGGGAAGCTGTTCTTTGGATCACTTATCACCCAATTATGTCAGAGGAACAATGCTCAAAGGAAGGGCAAAGCTTCCACATCTCAAGCCACTCCACTACCAGGGCTAACACCTACTTCACCTCCTCAACATACTCCAGTTTCAGGACCCACACCATCATCAGAGACCGTTGCATTTGCCTTCCAACAGCTAGATAGAATTGAAGACAAGCTGAAGGCTTACTGGGTCTATGCCAAGGAGAGAGATGAAACTATTAGAGAGTTCTACCTCTCTATCGCCCCCAGCATCGCCCCGTGTTCCCTGACTTCCCTCAATCACTGCTGCCCAAGAAGAAAAAGAATTTGA
Coding sequence (CDS)
ATGCCAGACTTCGTGACCAAAGTTATAACCCAGTACAAGTGGCAAGAGTTCTGTGCTCTCCCTCAGGAGGCAGTGGTGCCTTTAGTTCGAGAATTCTACGTTGAACTGAGGGAAGAGAGCATGAGCATGTCAGTGGTGAGAGGTAAAATGGTTAGTTTCTCTTCTGTTGACATTAACAGGGTGTACAGGATCAAAGCACCCTTACATCCAAGAGGGAATGATGCCATCAAGAACCCCTCGCCCAAGCAGATGAAAGAAGCACTGAAATTAGTGGCCAAAAGGGAGTTTAATGGAAGGAGTCCCATACAAAGAGAGAGTTATGCTCCTCTACAGTATCTTGAAGGGTTGGAGATAAATACTGGGAGCATCATCAAGGAGGAGATCCTTTCATGTGGAAGGAAGAAAGTAGGGAAGCTGTTCTTTGGATCACTTATCACCCAATTATGTCAGAGGAACAATGCTCAAAGGAAGGGCAAAGCTTCCACATCTCAAGCCACTCCACTACCAGGGCTAACACCTACTTCACCTCCTCAACATACTCCAGTTTCAGGACCCACACCATCATCAGAGACCGTTGCATTTGCCTTCCAACAGCTAGATAGAATTGAAGACAAGCTGAAGGCTTACTGGGTCTATGCCAAGGAGAGAGATGAAACTATTAGAGAGTTCTACCTCTCTATCGCCCCCAGCATCGCCCCGTGTTCCCTGACTTCCCTCAATCACTGCTGCCCAAGAAGAAAAAGAATTTGA
Protein sequence
MPDFVTKVITQYKWQEFCALPQEAVVPLVREFYVELREESMSMSVVRGKMVSFSSVDINRVYRIKAPLHPRGNDAIKNPSPKQMKEALKLVAKREFNGRSPIQRESYAPLQYLEGLEINTGSIIKEEILSCGRKKVGKLFFGSLITQLCQRNNAQRKGKASTSQATPLPGLTPTSPPQHTPVSGPTPSSETVAFAFQQLDRIEDKLKAYWVYAKERDETIREFYLSIAPSIAPCSLTSLNHCCPRRKRI
Homology
BLAST of Lag0011295 vs. NCBI nr
Match:
PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])
HSP 1 Score: 88.6 bits (218), Expect = 8.4e-14
Identity = 79/287 (27.53%), Postives = 118/287 (41.11%), Query Frame = 0
Query: 4 FVTKVITQYKWQEFCALPQEAVVPLVREFYVELREESMSMSVVRGKMVSFSSVDINRVYR 63
F+ +VITQ+ W++FCA P++ +VPLVREFY L + + VRG VS+S IN V+
Sbjct: 62 FIAQVITQHNWKQFCAHPEDPIVPLVREFYANLTDPEENTVYVRGVQVSWSEEAINAVFG 121
Query: 64 IKAPLHPRGNDAIKNPSPKQMKEALKLVAK--REFN----GRSPIQRESYAPL------- 123
+ P+ ++ I+N + + + L+ VA E+N G R + P
Sbjct: 122 LGDPVDEH-SEFIQNITQQDLITVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHF 181
Query: 124 -----------------------QYLEGLEINTGSIIKEEILSCGRKKVGKLFFGSLITQ 183
L G IN G +I EI +C +K G LFF SLIT+
Sbjct: 182 LKSRLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITR 241
Query: 184 LCQRNNA---------QRKGKASTSQATPLPGLTPTSPPQHTPVSGP--TPSSETVAFAF 223
LC+ A G+ + PT Q S P S+ T
Sbjct: 242 LCRNARAPFLVNEEKLHNTGEIDAIAVARIAQEGPTESTQQPSSSRPATASSNRTNGDIL 301
BLAST of Lag0011295 vs. NCBI nr
Match:
PON35554.1 (hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii])
HSP 1 Score: 83.6 bits (205), Expect = 2.7e-12
Identity = 60/187 (32.09%), Postives = 87/187 (46.52%), Query Frame = 0
Query: 4 FVTKVITQYKWQEFCALPQEAVVPLVREFYVELREESMSMSVVRGKMVSFSSVDINRVYR 63
F+ +VITQ+ W++FCA P++ +VPLVREFY L + + VRG VS+S IN V+
Sbjct: 53 FIAQVITQHNWKQFCAHPEDPIVPLVREFYANLTDPVENTVYVRGVQVSWSEEAINAVFG 112
Query: 64 IKAPLHPRGNDAIKNPSPKQMKEALK--LVAKREFN----GRSPIQRESYAPL------- 123
+ P+ ++ I+N + + L+ VA E+N G R + P
Sbjct: 113 LGDPVDEH-SEFIENITEHDLITVLETVAVAGAEWNVSAQGAYTCIRSALTPAAKVWFHF 172
Query: 124 -----------------------QYLEGLEINTGSIIKEEILSCGRKKVGKLFFGSLITQ 155
L G IN G +I EI +C +K G LFF SLIT+
Sbjct: 173 LKSHLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITR 232
BLAST of Lag0011295 vs. NCBI nr
Match:
PON70375.1 (hypothetical protein PanWU01x14_080440 [Parasponia andersonii])
HSP 1 Score: 78.6 bits (192), Expect = 8.6e-11
Identity = 57/189 (30.16%), Postives = 78/189 (41.27%), Query Frame = 0
Query: 2 PDFVTKVITQYKWQEFCALPQEAVVPLVREFYVELREESMSMSVVRGKMVSFSSVDINRV 61
P F+ VI Q+ WQ FCA P++ +VPLVREFY + +RG V S IN +
Sbjct: 81 PPFIADVIIQHNWQLFCAHPEDPIVPLVREFYTNMTNPDDDTVYIRGVQVPLSVEAINTI 140
Query: 62 YRIKAPL--HPRGNDAIKNPSPKQMKEALKLVAKREFN----GRSPIQRESYAP------ 121
+ + P+ H + I P + E + +V E+N G R S P
Sbjct: 141 FSLGDPIDEHSEFVEDITKPELVIVLETVAIVG-AEWNVSSQGAYTCLRSSLNPPAKVWY 200
Query: 122 ------------------------LQYLEGLEINTGSIIKEEILSCGRKKVGKLFFGSLI 155
L G IN G +I EI +C +K G LFF SLI
Sbjct: 201 HFLKSRLLPTTHGKTVSKEHVSLLYSMLTGKSINVGRMIHREICACAARKSGALFFPSLI 260
BLAST of Lag0011295 vs. NCBI nr
Match:
PON78020.1 (hypothetical protein PanWU01x14_023740 [Parasponia andersonii])
HSP 1 Score: 67.0 bits (162), Expect = 2.6e-07
Identity = 70/252 (27.78%), Postives = 103/252 (40.87%), Query Frame = 0
Query: 26 VPLVREFYVELREESMSMSVVRGKMVSFSSVDINRVYRIKAPLHPRGNDAIKNPSPKQMK 85
+PLVREFY L + + VRG VS+S IN V+ + P+ ++ I+N + ++
Sbjct: 14 LPLVREFYANLTDPEENTIYVRGVQVSWSEEAINAVFGLGDPVDEH-SEFIENITEPELI 73
Query: 86 EALKLVAK--REFN----GRSPIQRESYAPL----------------------------- 145
L+ VA E+N G R + P
Sbjct: 74 TVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKIVSKDRMLLL 133
Query: 146 -QYLEGLEINTGSIIKEEILSCGRKKVGKLFFGSLITQLCQRN----NAQRKGKASTSQA 205
L G IN G +I EI +C +K G LFF SLIT+LC+ N ++ A
Sbjct: 134 HSMLNGKSINVGRMIHSEIRACAAQKTGALFFPSLITRLCRNAPFLVNEEKLHNTGEIDA 193
Query: 206 TPLPGLT---PTSPPQHTPVSGP--TPSSETVAFAFQQLDRIEDKL----------KAYW 223
+ +T PT Q S P SS T QQL +E +L + +W
Sbjct: 194 IAVARITQEGPTESTQQPSSSRPAAASSSRTNGDVLQQLKALEQRLSQQEHTHKQQQQFW 253
BLAST of Lag0011295 vs. NCBI nr
Match:
PON46588.1 (hypothetical protein TorRG33x02_325580, partial [Trema orientale])
HSP 1 Score: 66.6 bits (161), Expect = 3.4e-07
Identity = 53/189 (28.04%), Postives = 82/189 (43.39%), Query Frame = 0
Query: 2 PDFVTKVITQYKWQEFCALPQEAVVPLVREFYVELREESMSMSVVRGKMVSFSSVDINRV 61
P F+ VI Q+ + FCA P++ +VPLVREFY L + V G V S IN +
Sbjct: 63 PSFIADVIAQHNLRLFCAHPEDPIVPLVREFYANLTDPEEDTVYVGGVQVPLSEKAINAI 122
Query: 62 YRIKAPLHPRGNDAIKNPSPKQMKEALK--LVAKREFNG---------RSPIQRESYAPL 121
+ + P+ ++ ++ + ++ LK VA+ E N RS + + +
Sbjct: 123 FGLGDPVDEH-SEFVEAITELELLTVLKTVAVARAESNVSSHSAYTCIRSSLNQAAKIWY 182
Query: 122 QYLE-------------------------GLEINTGSIIKEEILSCGRKKVGKLFFGSLI 155
+LE G IN G II +EI + ++ G LFF S +
Sbjct: 183 HFLESRLLPTTHGKIVSKYCVLLLYSILTGKSINVGRIIYDEIYTHAARRSGALFFPSSV 242
BLAST of Lag0011295 vs. ExPASy TrEMBL
Match:
A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)
HSP 1 Score: 88.6 bits (218), Expect = 4.0e-14
Identity = 79/287 (27.53%), Postives = 118/287 (41.11%), Query Frame = 0
Query: 4 FVTKVITQYKWQEFCALPQEAVVPLVREFYVELREESMSMSVVRGKMVSFSSVDINRVYR 63
F+ +VITQ+ W++FCA P++ +VPLVREFY L + + VRG VS+S IN V+
Sbjct: 62 FIAQVITQHNWKQFCAHPEDPIVPLVREFYANLTDPEENTVYVRGVQVSWSEEAINAVFG 121
Query: 64 IKAPLHPRGNDAIKNPSPKQMKEALKLVAK--REFN----GRSPIQRESYAPL------- 123
+ P+ ++ I+N + + + L+ VA E+N G R + P
Sbjct: 122 LGDPVDEH-SEFIQNITQQDLITVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHF 181
Query: 124 -----------------------QYLEGLEINTGSIIKEEILSCGRKKVGKLFFGSLITQ 183
L G IN G +I EI +C +K G LFF SLIT+
Sbjct: 182 LKSRLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITR 241
Query: 184 LCQRNNA---------QRKGKASTSQATPLPGLTPTSPPQHTPVSGP--TPSSETVAFAF 223
LC+ A G+ + PT Q S P S+ T
Sbjct: 242 LCRNARAPFLVNEEKLHNTGEIDAIAVARIAQEGPTESTQQPSSSRPATASSNRTNGDIL 301
BLAST of Lag0011295 vs. ExPASy TrEMBL
Match:
A0A2P5AGA5 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_335450 PE=4 SV=1)
HSP 1 Score: 83.6 bits (205), Expect = 1.3e-12
Identity = 60/187 (32.09%), Postives = 87/187 (46.52%), Query Frame = 0
Query: 4 FVTKVITQYKWQEFCALPQEAVVPLVREFYVELREESMSMSVVRGKMVSFSSVDINRVYR 63
F+ +VITQ+ W++FCA P++ +VPLVREFY L + + VRG VS+S IN V+
Sbjct: 53 FIAQVITQHNWKQFCAHPEDPIVPLVREFYANLTDPVENTVYVRGVQVSWSEEAINAVFG 112
Query: 64 IKAPLHPRGNDAIKNPSPKQMKEALK--LVAKREFN----GRSPIQRESYAPL------- 123
+ P+ ++ I+N + + L+ VA E+N G R + P
Sbjct: 113 LGDPVDEH-SEFIENITEHDLITVLETVAVAGAEWNVSAQGAYTCIRSALTPAAKVWFHF 172
Query: 124 -----------------------QYLEGLEINTGSIIKEEILSCGRKKVGKLFFGSLITQ 155
L G IN G +I EI +C +K G LFF SLIT+
Sbjct: 173 LKSHLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIRACAARKTGALFFPSLITR 232
BLAST of Lag0011295 vs. ExPASy TrEMBL
Match:
A0A2P5DAQ2 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_080440 PE=4 SV=1)
HSP 1 Score: 78.6 bits (192), Expect = 4.2e-11
Identity = 57/189 (30.16%), Postives = 78/189 (41.27%), Query Frame = 0
Query: 2 PDFVTKVITQYKWQEFCALPQEAVVPLVREFYVELREESMSMSVVRGKMVSFSSVDINRV 61
P F+ VI Q+ WQ FCA P++ +VPLVREFY + +RG V S IN +
Sbjct: 81 PPFIADVIIQHNWQLFCAHPEDPIVPLVREFYTNMTNPDDDTVYIRGVQVPLSVEAINTI 140
Query: 62 YRIKAPL--HPRGNDAIKNPSPKQMKEALKLVAKREFN----GRSPIQRESYAP------ 121
+ + P+ H + I P + E + +V E+N G R S P
Sbjct: 141 FSLGDPIDEHSEFVEDITKPELVIVLETVAIVG-AEWNVSSQGAYTCLRSSLNPPAKVWY 200
Query: 122 ------------------------LQYLEGLEINTGSIIKEEILSCGRKKVGKLFFGSLI 155
L G IN G +I EI +C +K G LFF SLI
Sbjct: 201 HFLKSRLLPTTHGKTVSKEHVSLLYSMLTGKSINVGRMIHREICACAARKSGALFFPSLI 260
BLAST of Lag0011295 vs. ExPASy TrEMBL
Match:
A0A2P5DXM3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE=4 SV=1)
HSP 1 Score: 67.0 bits (162), Expect = 1.3e-07
Identity = 70/252 (27.78%), Postives = 103/252 (40.87%), Query Frame = 0
Query: 26 VPLVREFYVELREESMSMSVVRGKMVSFSSVDINRVYRIKAPLHPRGNDAIKNPSPKQMK 85
+PLVREFY L + + VRG VS+S IN V+ + P+ ++ I+N + ++
Sbjct: 14 LPLVREFYANLTDPEENTIYVRGVQVSWSEEAINAVFGLGDPVDEH-SEFIENITEPELI 73
Query: 86 EALKLVAK--REFN----GRSPIQRESYAPL----------------------------- 145
L+ VA E+N G R + P
Sbjct: 74 TVLETVAAAGAEWNVSAQGAYTCIRSALTPAAKVWYHFLKSRLLPTTHGKIVSKDRMLLL 133
Query: 146 -QYLEGLEINTGSIIKEEILSCGRKKVGKLFFGSLITQLCQRN----NAQRKGKASTSQA 205
L G IN G +I EI +C +K G LFF SLIT+LC+ N ++ A
Sbjct: 134 HSMLNGKSINVGRMIHSEIRACAAQKTGALFFPSLITRLCRNAPFLVNEEKLHNTGEIDA 193
Query: 206 TPLPGLT---PTSPPQHTPVSGP--TPSSETVAFAFQQLDRIEDKL----------KAYW 223
+ +T PT Q S P SS T QQL +E +L + +W
Sbjct: 194 IAVARITQEGPTESTQQPSSSRPAAASSSRTNGDVLQQLKALEQRLSQQEHTHKQQQQFW 253
BLAST of Lag0011295 vs. ExPASy TrEMBL
Match:
A0A2P5BCT7 (Uncharacterized protein (Fragment) OS=Trema orientale OX=63057 GN=TorRG33x02_325580 PE=4 SV=1)
HSP 1 Score: 66.6 bits (161), Expect = 1.6e-07
Identity = 53/189 (28.04%), Postives = 82/189 (43.39%), Query Frame = 0
Query: 2 PDFVTKVITQYKWQEFCALPQEAVVPLVREFYVELREESMSMSVVRGKMVSFSSVDINRV 61
P F+ VI Q+ + FCA P++ +VPLVREFY L + V G V S IN +
Sbjct: 63 PSFIADVIAQHNLRLFCAHPEDPIVPLVREFYANLTDPEEDTVYVGGVQVPLSEKAINAI 122
Query: 62 YRIKAPLHPRGNDAIKNPSPKQMKEALK--LVAKREFNG---------RSPIQRESYAPL 121
+ + P+ ++ ++ + ++ LK VA+ E N RS + + +
Sbjct: 123 FGLGDPVDEH-SEFVEAITELELLTVLKTVAVARAESNVSSHSAYTCIRSSLNQAAKIWY 182
Query: 122 QYLE-------------------------GLEINTGSIIKEEILSCGRKKVGKLFFGSLI 155
+LE G IN G II +EI + ++ G LFF S +
Sbjct: 183 HFLESRLLPTTHGKIVSKYCVLLLYSILTGKSINVGRIIYDEIYTHAARRSGALFFPSSV 242
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
PON46472.1 | 8.4e-14 | 27.53 | hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii] | [more] |
PON35554.1 | 2.7e-12 | 32.09 | hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii] | [more] |
PON70375.1 | 8.6e-11 | 30.16 | hypothetical protein PanWU01x14_080440 [Parasponia andersonii] | [more] |
PON78020.1 | 2.6e-07 | 27.78 | hypothetical protein PanWU01x14_023740 [Parasponia andersonii] | [more] |
PON46588.1 | 3.4e-07 | 28.04 | hypothetical protein TorRG33x02_325580, partial [Trema orientale] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A2P5BCG4 | 4.0e-14 | 27.53 | Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... | [more] |
A0A2P5AGA5 | 1.3e-12 | 32.09 | Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... | [more] |
A0A2P5DAQ2 | 4.2e-11 | 30.16 | Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_080440 PE... | [more] |
A0A2P5DXM3 | 1.3e-07 | 27.78 | Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE... | [more] |
A0A2P5BCT7 | 1.6e-07 | 28.04 | Uncharacterized protein (Fragment) OS=Trema orientale OX=63057 GN=TorRG33x02_325... | [more] |
Match Name | E-value | Identity | Description | |