Lag0011291 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0011291
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr1: 20345331 .. 20347488 (+)
RNA-Seq Expression	Lag0011291
Synteny	Lag0011291

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAACTCATTGCACAGGATACCCCCACTCGCATGTCTCCTACATGGATGCTTTGGATCATTGCATCTGTATCGAATACAAATGGGCCGTATCACATAGTGTTACCAGGATAAGGTACCCAGCCTTATCCCTATACTATAGACCATTTAGGTTGTTACTTGAACACTGATCCCCGTATGTCCCCACATACTAGTTCAAGTTTCATCTAAACAACCTAGGATCTTAGTTTATTGGATTTGGGTCAAATTGTGCAATTTTAGTAACAATAACTCTTTATTGTACAAACCTCAATAACGACGTATTGATACAAGTGAACAATTTGTCACCATTCACTACCTACGAGTTTTAGGGCATAAAACCCAACAATTCCTTCCTCCAAATTCGAAGGTTCTCACGCGCTTCGTTGCATTTCCTTCCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGTGCAGTCCCTTCCTCCAAATTCGAAGGTTCTCACGCGCTTCGTTGCATTTCCTTCCCCCCAAATTCGAAGGTTCTCACGGGCTTCGCAGCAGTTCCTTCCCCCCAAGTTTGAAGGTTCTCACGCGCTTCGCTGCAATTCCTTCTTCCAAGTTCAAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACTCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAATTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGGTTCGTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCACGCACTTTGCTGCAGTTCCTTCTCCCAAATTCGAAGGTTCTCACGCATTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACATCCCTTCGGAGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACATCCCTTCGGAGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCCGCTTCGCGGCAGTTCCTTCCTCCAAGTTCGAAGGTCCTCACGCGGCTTCGCTGAAGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAGGTTCTCACGCGCTTCGCTGGAGTTCCTTCCTCCAAGTTCGAGGGTTCTCACGCGCTTCGCTGCAGTTCCTCCTCCAAGTTCGAGGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAGGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCCAAGTTCGAAGGTCTCACGTCGCTTCGCTGCGCTCATGCGCTTTGCTACAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACATCGCTTCGCTGCGATCCTTCCTCCAAGTTCGAAGGTTTTCACGCGCTTCGCTCTGCAATTCCTTCCCCCAAGTTCGAAGTTTCTCACGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCGCTTCGTTGCATTTCCTTCCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCCTCAATGCTACGCTCAGCTTCACTGCTGCGCTACTTCCTAAAGTCCGAAGACGTCAATTGTCCTCACGCTGCGCTGCTTCCTTCTCCAAGTTCGAAGGTCCTCATGCTACGCTCGGCTACACTGCTGCACTACTTCCTAAAGTCCAAAGACGTCAATTGTCCCTGCATTCATGCTGAAAGGGCGTGACCGCGACACAAGTCCAAGGACATGTCCCAAAGCATGGAACATGTCTCTGTACTCATGCTGAAAGGCGTGGCGGCGACACAAGTCCAAGGACATGTCCCAAAGCAAGGAACATGTCCCTGTACTCATGCTGAAAGACGTGGCGGCAGCACAAGTCCAAGGACATGTCCCAAAGCAAGGAATATGTCCTTGCACTCGTGCTGAAAGGACGTAG

mRNA sequence

ATGCAAACTCATTGCACAGGATACCCCCACTCGCATGTCTCCTACATGGATGCTTTGGATCATTGCATCTGTATCGAATACAAATGGGCCGTATCACATAGTGTTACCAGGATAAGGTTCTCACGCGCTTCGTTGCATTTCCTTCCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGTGCAGTCCCTTCCTCCAAATTCGAAGGTTCTCACGCGCTTCGTTGCATTTCCTTCCCCCCAAATTCGAAGGTTCTCACGGGCTTCGCAGCAGTTCCTTCCCCCCAAGTTTGAAGGTTCTCACGCGCTTCGCTGCAATTCCTTCTTCCAAGTTCAAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACTCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAATTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGGTTCGTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCACGCACTTTGCTGCAGTTCCTTCTCCCAAATTCGAAGGTTCTCACGCATTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACATCCCTTCGGAGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACATCCCTTCGGAGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCCGCTTCGCGGCAGTTCCTTCCTCCAAGTTCGAAGGTCCTCACGCGGCTTCGCTGAAGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAGGTTCTCACGCGCTTCGCTGGAGTTCCTTCCTCCAAGTTCGAGGGTTCTCACGCGCTTCGCTGCAGTTCCTCCTCCAAGTTCGAGGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAGGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCCAAGTTCGAAGGTCTCACGTCGCTTCGCTGCGCTCATGCGCTTTGCTACAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACATCGCTTCGCTGCGATCCTTCCTCCAAGTTCGAAGGTTTTCACGCGCTTCGCTCTGCAATTCCTTCCCCCAAGTTCGAAGTTTCTCACGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCGCTTCGTTGCATTTCCTTCCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCCTCAATGCTACGCTCAGCTTCACTGCTGCGCTACTTCCTAAAGTCCGAAGACGTCAATTGTCCTCACGCTGCGCTGCTTCCTTCTCCAAGTTCGAAGGTCCTCATGCTACGCTCGGCTACACTGCTGCACTACTTCCTAAAGCGTGGCGGCGACACAAGTCCAAGGACATGTCCCAAAGCAAGGAACATGTCCCTGTACTCATGCTGAAAGACGTGGCGGCAGCACAAGTCCAAGGACATGTCCCAAAGCAAGGAATATGTCCTTGCACTCGTGCTGAAAGGACGTAG

Coding sequence (CDS)

ATGCAAACTCATTGCACAGGATACCCCCACTCGCATGTCTCCTACATGGATGCTTTGGATCATTGCATCTGTATCGAATACAAATGGGCCGTATCACATAGTGTTACCAGGATAAGGTTCTCACGCGCTTCGTTGCATTTCCTTCCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTGCAGCTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGTGCAGTCCCTTCCTCCAAATTCGAAGGTTCTCACGCGCTTCGTTGCATTTCCTTCCCCCCAAATTCGAAGGTTCTCACGGGCTTCGCAGCAGTTCCTTCCCCCCAAGTTTGAAGGTTCTCACGCGCTTCGCTGCAATTCCTTCTTCCAAGTTCAAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACTCGCTTCGCTGCAGTTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGCTGCAATTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGGTTCGTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCACGCACTTTGCTGCAGTTCCTTCTCCCAAATTCGAAGGTTCTCACGCATTTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACATCCCTTCGGAGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACATCCCTTCGGAGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCCGCTTCGCGGCAGTTCCTTCCTCCAAGTTCGAAGGTCCTCACGCGGCTTCGCTGAAGTCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAGGTTCTCACGCGCTTCGCTGGAGTTCCTTCCTCCAAGTTCGAGGGTTCTCACGCGCTTCGCTGCAGTTCCTCCTCCAAGTTCGAGGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCTCCAAGTTCGAGGGTTCTCACGCGCTTCGCTGCAGTTCCTTCCCCCCAAGTTCGAAGGTCTCACGTCGCTTCGCTGCGCTCATGCGCTTTGCTACAGTTCCTTCCTCCAAGTTTGAAGGTTCTCACATCGCTTCGCTGCGATCCTTCCTCCAAGTTCGAAGGTTTTCACGCGCTTCGCTCTGCAATTCCTTCCCCCAAGTTCGAAGTTTCTCACGCGCTTCGTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGCGCTTCGTTGCATTTCCTTCCCCCCAAATTCGAAGGTTCTCACGCGCTTCGCTCTGCAATTCCTTCCCCCAAGTTCGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGCGCTTCGTTGCAGTTCCTTCCTCAATGCTACGCTCAGCTTCACTGCTGCGCTACTTCCTAAAGTCCGAAGACGTCAATTGTCCTCACGCTGCGCTGCTTCCTTCTCCAAGTTCGAAGGTCCTCATGCTACGCTCGGCTACACTGCTGCACTACTTCCTAAAGCGTGGCGGCGACACAAGTCCAAGGACATGTCCCAAAGCAAGGAACATGTCCCTGTACTCATGCTGAAAGACGTGGCGGCAGCACAAGTCCAAGGACATGTCCCAAAGCAAGGAATATGTCCTTGCACTCGTGCTGAAAGGACGTAG

Protein sequence

MQTHCTGYPHSHVSYMDALDHCICIEYKWAVSHSVTRIRFSRASLHFLPPKFEGSHALRCSSFLQVRRFSRASCSPFLQIRRFSRASLHFLPPKFEGSHGLRSSSFPPSLKVLTRFAAIPSSKFKGSHALRCSSFLQVRRFSLASLQFLPPSSKVLTRFAAIPSPKFEGSHAVRAVPSSKFEGSRTLLQFLLPNSKVLTHFAAVPSSKFEGSHIPSEQFLPPSSKVLTSLRSSSFLQVRRFSRRFAAVPSSKFEGPHAASLKSLRCSSFLQVRGSHALRWSSFLQVRGFSRASLQFLLQVRGFSRASLQFLPPSSRVLTRFAAVPSPQVRRSHVASLRSCALLQFLPPSLKVLTSLRCDPSSKFEGFHALRSAIPSPKFEVSHALRAVPSSKFEGSHALRCISFPPNSKVLTRFALQFLPPSSKVLTRFVAVPSSKFEGSHALRCSSFLNATLSFTAALLPKVRRRQLSSRCAASFSKFEGPHATLGYTAALLPKAWRRHKSKDMSQSKEHVPVLMLKDVAAAQVQGHVPKQGICPCTRAERT

Homology

[Close]

BLAST of Lag0011291 vs. NCBI nr
Match: TYJ98643.1 (hypothetical protein E5676_scaffold507G00280 [Cucumis melo var. makuwa])

HSP 1 Score: 70.9 bits (172), Expect = 3.9e-08
Identity = 29/39 (74.36%), Postives = 33/39 (84.62%), Query Frame = 0


Query: 1  MQTHCTGYPHSHVSYMDALDHCICIEYKWAVSHSVTRIR 40
          MQTHC GYPHSHV+YMDALD C+CI+YK +  HSV RIR
Sbjct: 1  MQTHCIGYPHSHVAYMDALDQCVCIKYKGSCIHSVNRIR 39

[Close]

BLAST of Lag0011291 vs. NCBI nr
Match: KAA0047449.1 (hypothetical protein E6C27_scaffold498G00520 [Cucumis melo var. makuwa])

HSP 1 Score: 70.9 bits (172), Expect = 3.9e-08
Identity = 29/39 (74.36%), Postives = 33/39 (84.62%), Query Frame = 0


Query: 1  MQTHCTGYPHSHVSYMDALDHCICIEYKWAVSHSVTRIR 40
          MQTHC GYPHSHV+YMDALD C+CI+YK +  HSV RIR
Sbjct: 1  MQTHCIGYPHSHVAYMDALDQCVCIKYKGSCIHSVNRIR 39

[Close]

BLAST of Lag0011291 vs. ExPASy TrEMBL
Match: A0A5A7U1U5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold498G00520 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.9e-08
Identity = 29/39 (74.36%), Postives = 33/39 (84.62%), Query Frame = 0


Query: 1  MQTHCTGYPHSHVSYMDALDHCICIEYKWAVSHSVTRIR 40
          MQTHC GYPHSHV+YMDALD C+CI+YK +  HSV RIR
Sbjct: 1  MQTHCIGYPHSHVAYMDALDQCVCIKYKGSCIHSVNRIR 39

[Close]

BLAST of Lag0011291 vs. ExPASy TrEMBL
Match: A0A5D3BHA6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold507G00280 PE=4 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 1.9e-08
Identity = 29/39 (74.36%), Postives = 33/39 (84.62%), Query Frame = 0


Query: 1  MQTHCTGYPHSHVSYMDALDHCICIEYKWAVSHSVTRIR 40
          MQTHC GYPHSHV+YMDALD C+CI+YK +  HSV RIR
Sbjct: 1  MQTHCIGYPHSHVAYMDALDQCVCIKYKGSCIHSVNRIR 39

The following BLAST results are available for this feature:

BLAST of Lag0011291 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ98643.1	3.9e-08	74.36	hypothetical protein E5676_scaffold507G00280 [Cucumis melo var. makuwa]	[more]
KAA0047449.1	3.9e-08	74.36	hypothetical protein E6C27_scaffold498G00520 [Cucumis melo var. makuwa]	[more]

BLAST of Lag0011291 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0011291 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7U1U5	1.9e-08	74.36	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A5D3BHA6	1.9e-08	74.36	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Lag0011291 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0011291.1	Lag0011291.1	mRNA