Lag0009344 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0009344
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Pentatricopeptide (PPR) repeat protein-like
Location	chr9: 38345413 .. 38355321 (+)
RNA-Seq Expression	Lag0009344
Synteny	Lag0009344

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACTTGGATAAAGCGGATTTAAGGTAGAAAAGTAACATAGCAATGACCAAAATGGCTATTTTAAAAAAACAATTAGGAACTAAAAATGGACATGTTGAAAGTTCAGAGACTAAAATAGAACAAACTTGAAAGTCTAAAGACCAAAATAGACATATTGAAAGTTTAGGGACCAAAATAGAACAAACTCGAAAGTTCGGAGACTAAAATGAGATTTATACCTATAAATAAATTAAATATGATAAAATAATGATATTATTTACCAAACAAGTCATAAAACTTGTGGGATAGATGAAATTTCGTTTTTAGTTATAAAATTTTATATTTTCTTTTCTCACTTTTTTTTTTTTTTGTTATTTATTTTGTGGATAGGAAGGTGTATATAATTATCTGACCATGTTTTAAGTGAAATATTGTGTTTGTTAGCTCGACATTTTCACGAACAGCAACTATTTGTCTCTTCAACAACATTGCTTTGGGTTGGACACAAGCATCATTGTTGGTACACTTTCTTTCTCCAAATATATATTTACAACTAATACAACATTACTTTTACATTTATATGTCACACATTTTAGATAACCTAGGAAATTTTGAGGAATCGAAGTATTTATATCTGATATGTGAATTTGTTTATCTAAATTTACCAAATTTTAAATGACTTTAATTTGGTTAGGTAAACTTGAACTTCTTGATTCAAAATTAATTATAATGATGATCAGTTAATTTTTTTTTCCTTTTTTTATTTGGTCGAATTGAATTATGAACTTAAATAAATAAGGAAATGCTTTTGGTTGGTTGAATGGAAGATTTCCATTGTGGTTTATTCTTGTTTCAAATGTAGGATTATTCGGATGAAACACTGGTTTTTTATATGGTTGTGATAGATAATGTGTTTGGTTCACAATTTTAATAAGCATAAAGTAAATTTAGGGTGTGTTTGGGAACGCTTTCTAGTTTAAACACGGCCTTTTTTTAAAATATATATATATTTCGCTAAAATGTTTTTATATCTTATATTCTTCAAAGATGTTCTAAATAAGAAATTTGTTTGGTTGTTCCACATTCAAGAGCGATTCTATTAATTATATTTTTTTTTTACTACATATTTCAAAGATTTTTTTGATTAATCACTTCAAATTATTTTGGGCGAAATCCATCTCTCAGGTGTTTCTTCCAAAGTAGTTTTTAGATTAATCCAAGTTTTTAAAGTGATTTTTATTTACTAATATTTTTTTTAAAAAAAATAATTTTGATTATGTAAAATCACTAAGTTGTACTTAATATACTTTTTAATTTTCTCATAGGTGCTCATAAAGAAATTAGTTTGAGGAATATAATGTTAAAATTCATCTTTTTTTTTTTCTTTTTTTTTTTGACAATATGTGGGTGTGAGGAATTCGAACCACATATCTCTTGATCATTAGTACAAACTTTATATCGGTTGGTTGTTAACCTTCTCTCTGTTGAGTGATATGTATATATTTTTAATAAGTTGAATTTCTTTGAGTTTAAGTGTGTCAAATTTAGACTTTGATTTTGGTTTTTCAATGTATTGGTGCAGTACTACTTAAAGGCTCGTTTTCACTCCAACAAAGACCAATTTGCTAGCTTATTGATAATTATTGGGGGTCTGGGGGCCATTTCACAGGTATGTAATAATTTTTTTTAACTTAAATTATTATAAGTTTAATCTCTAAGATCTCGTTTGATAATCCTTTGATTTTTTGTCGTTGAAAACCGTACGTTTTTTTTTCACCATTTCTATACAATATGTTTGATATTTCTTAAGGAAACATTTGAGTTCTGGGCCAAAATTCAAAAACAAAAAACAAACTATTAAGGTCCCCTTTGATAACCATTTCGTTTTTTGTTTTTGGTTTTTGAAAATCAAGCTTATACCAGTCCAATTTATGTTACTTTCACTTATATGTTTCTTTATTTTAGTATATCAACCTTTTTTCTTGTTTTCAAAAATCAAGTCCAATTTTGAAAGAAAAAAAAAAGTAGTTTTCAAAAACTTGTTTTTTTTTTTTTTTTAGAATTTGGCTAGGAATTCAAATTGATCTTTAACAAGGATGAAAGTCATGGTAAGAAATTTAGGAGAAAACAAACATAATTTTCAAAAACCAAAAACCAAAAACAAAACGGTTATCAAACGGGGCCTAAGGTCTCATTTGATATAACCATTTGATTTTTTGTTTTTGAAAATTAAGTTTACAAACATCACTTTCACCTATAAGGTTCTTTGTGTTTTTTATATCTTCTTTCCATGTTGTCAAAAACCAAACTCAAGTTTTGAAAACTAAAAAAAAAAATAGTTTTCAAAAACTTGTTTTTGTTTTTTGAATTTGGCTAGGAATTCCTTAACAAATATATGAAAATCATTCATTCTAAAATATTTGAGAGAAATCAAACTTAATTTTCAAAAACTAAAAACAAAATAGTTATCAAACATGGACCTAAAAACTACGTTCTAGCTTATAAACACTACTTTCTATAAGTTTGTTTGTTTTGTTATTTACATTCTCCCCATGTTTTCAAAAATCAAGTCTACTTAATTCTTAAATACAAAAGCAATGCATCATATAACATTACACTAATGAAGTTAACGAGAATAATTTACTGGACACAAAATTAAAAATTCAAAGATATATTAGAAACACTTTTCTAAATACAAATGGACAAACAGATACAACTTCGATATTTTTTGAAGTACAAGAGACACAACTCTGAAAGTATGTAAGTATGAATCAAACTTGTAATTCAACATTTTTCTAATCTATTTAAATCATATTGGATAGTACATTAGGTTTAATGTTGTGAATAAAATTTTGCAGGCCATTGTGGCTTCTTCCTTGTCAGCTATGATAGGAGATAAAAACTTGCTTTCAGTTTCTCTCTTTGCAACCTTTATACAAGTAAGGGACTTTGATTAATACTTAATTATTCTCTTAAACTGCTTTTAATTTACACATTACTCACCATTGCTCTCTTTAATGCAGTTCTTAATTTTGAGCATATCTTGGTCATTTTGGGTAAGTACTCCTCTACTTAAATTACAAGTTTGGTTTTAAACTTTCTAAATACATTTATGAGCTTTCAATTTTTGTATCTAATTAATTAATTTATGATGTGAAATCCATTAGTTTAGCCAGATGTAAAATGCGATATTGTTTAACGATCATGTCAAGGACTAATTTTGAACCAACATCGACATTTGGTAAACACATGTGAAGAAAAGAGCTTAGAGAGAGTTACGAAAAGACATCCCGTAAAGATTTTTTATTTATTTATTTATTTATTTTTAGAAGAAGAAAGATTGATTATTAGAAACTTTTTAAATAAAAAAAAACTAATAAAAATGTTTATTAATTTAACCATATTCTTGTCTCCCTCTTTGGAATATAATTCATTAATTTGAAAACCTTACAGGTCGTTTATGCTTCATATTCAGCACTTTTTCTTCTTTCTTGGTGCGTAATTCCGGCGGTAAGTTTTATTTAAATTTGTTATTTTTTTCCAAGTGTTTCTTTTATGAGTAGAGTTTTATTTTCTTTTATTTTTATTATTTACATGATAGCCAAACAGTATGAAATATTTAAAAACACTTATAAGATAATGGGAAAAGAAAATCCCAAAGTTAATGTATAAATATTGGGTTTTAATAAATAGTTTTTTAAATTGCTTACACAGACATCCAGTATTGCATCAAAGCAAGTCGAGGCTCACGAGCAGGTAAATGATTGTTACATATTTTTCTCAAAACAAAATTTGGTTAAAATCTTGTTAAAATCTTGACAACTAAGAAAGAGGAAGAGAAAAAAAATGAGAAAATCCTTTTTTCTCTCCTAGTTGTCAACGTTTTAATGGTGGACTGGTATGCAACCAAGTTTGTTCGCTTTTCTAATTTGAATAAACTTTGAACTCAAAAATTACTTTTTCTTTTTCCTCCTAATTTCGATTTTCCTTTTTCCATTTAACAACTCTTTCCATCATTAGGGAAAAGCTCAAGGTTGCATTTTTGGCATTCAAAGCTTTGCTTATGCTATATCTCCATTAGCTTTCAATCCGGTTGCAGGTATATAAAATATCAGGTTAAAAAACATTTTTAGTCCTTGAACTTTCACGAAACTAACCATCTAATCTCAGTACTTTAGTTTATAACGGTTTAGTCCTTGAATTTTAGTTTATAACGATCTAATCTTTGTACTCTTATATTTATAAAAATTTATTTAATGTCCTTAAGTACTTTAAATTTTGTAACAATTTAGTCCCTTCATAGAAAAATATTATTAAAATGTATAAGTAATAGAGTGCTATTTATCATTAATATGTTTTGGGTTCATTTATTCTTTTATGCTTTCCCCTTTTTTTCTCTGCCTTTTAAGTTGTCCTTTTGGTAGCTGTCAAGAGTCCTTCCTGCTGCTATATGTGTGCCTTGCTACCTCTGTATTGTTCAGATTAGTGAATATCAAGAATACATTTCAAACCTTTTTTCTCTCTGGATTTTACCTTTTAAGATTTTTTTACGTAGGTAAATCGACAAACTAACTAATTAGGGATCAAATGCGTTTATAAAGCTACAAAGATTATATGACACACTTAATTTTGATGAGATCTTGACAACTTTTAAAAATTTGAAAATATAGAGACTAAATTGTTACAAATTAAAATTCGACGGACTAAAATTGTTACTTTTACGAAAGTTCTCGACCCACTCTTTTTAATACAATTATAGTTTTATTAGTGTACTGACTTGTGGATCTTTCCAGCTCTTTTCTTATCTGAGAACGCACCATTTGACTTTCCTGGCTTTATTATTTTGTGCCTTGGATTTTTTCCGGTAAGAAAATGAAAATTCACTTCAAATTCCTATAGTTTGTTAAATTCTTATGTTATTAATTAATTGAAATTCATGTGTATATGTATTATTTTGCAGTTGGTGGCCTTTGTATTGAGCCTTAGGATCAAAGTAAATCCGTCCATTTCAAGTGAAGAAGGTCATTAATGACAAAGCTTGTATTAGTATCATGCTACTCCAAGAAATAATCTATTTATAATTACGAGATCATTGTATGTATATATATGTTACCTTCAATTTAGACAGAGTTCGTTAGATAAAATACCAATTATCATTTCAAAGGTCGATAGTTTGATCCTCACCCGCAATTATTAAACTAAAAAAGACACGTTGTTCGTATGTTTTGAAGAAAAAAAGAACAAACTTTATTATTCACTTTAATTTGTTAACCTGAGTACTACTTAACTTTCTTTTTAGTTCAATGATATTTGAGATGGAAGCATTCGAACCTCTAAATTCTTGTTCGCTAAACTATGCTCACATTGAAAATGAGAAGGAAGTTCATAATTAGGTTATAGATAGAATTATTATATTTGAAAATGAAATATTTTAGGAAAATGTATAATTTTGTCCGCCATGTTTTATTATTTTTCAAGTTTGGTTCTAATGTAAGATTTCTTTAGAAGATAAGAACTTCTTTCATTTTTCTGTAAAATTTAATTTCGTTTAATTTTTTTTTTTGGTTATTCTTGATGTTGAGACTGGGATCAAAATCTCACATTGGCTACATAAGGGAAGGATCATGGACTTATAAAGGGAAAATATGAGACCTTTTGGGGTGAACCAAAAGTAAAGTCATTATGACTTATGTCCAAAGTGGACAATATCACAATCCGAGTGAAACTAAAGTATAAACTCTAAATCCACAAAAGTAAAGTCATGATGAAAAAATCAATCGAGAGATCTGACATGGCCTAAATAAGGAATGAGGAAATTGGAAGATAGAATTGAAAATTTTACACATTTTGGAGAAAAGTGTACTCTTATATGTTTGGTTCTCACAAATGTTTTTATACACAAATTATTATTTACTTAAGAAATCTTTAAAAAAAATTGGTTTCAAGTGTTTCTCTCAAAATTTTATCAATCTCATTTTCTAATAAGTCATTTTTAGTGATTATCAAACACTATAAATTTTTTCAAAATAATTTATTTTTAAAATTAAACACTTGAAAAATTAAACCAAAACACTTAGGGGTCGTTTGGCCCACTTTGTTGGTTATAATAGTGGGGGCTATTATAACCAACCCAATGTTTGGGGCATCAACAAAAATAAAGGGAGAAGTTGGTTATTTTTCCCTTTGTGTTGCTACGGTAACCACTATTCAACCCACCCCAATTATTATATTCACTCCCTACAATAACTCTTTTCTCTCTTCTTCCATGTGACTGATTGACTTTCTTATCGAAAATTGGCCGACGACTTTTCCAGCGACCACCGACAAATTTTTCGGCGATCGACGTCGACTTTCCGGTCACTTTTCCGGCGATCACCGACAATTTTTTTTTTTTTTTATAACTTTCTTCTCGTTTTCATTTCGAAAATATAAATAATAATAATAATAATAAAGAAAATAAAAAAATTAAAAAAAAGGTAGAATAAATGAAAGGAAAAAAGAGGGAAAAAAATTTCAGTCGCCGAAAATTTTTTGGTGGTCGTCGAAAAAATCGAAAAAATTATAGGGAGTTAGATACTAGGTTGTCTTTGTATAAATATGGAGTTTTATTACATAATTACTTTTGATAATGAAGTATATGAATGTTTACCTTCATCGTACCATATTTTTCATTCCAAATTATACTTCTCGTATTTAAGTTTACCGTGATAATAATATTTTTTTAAAAAAATACTACTCAAGTTTTTATTTTATGTGATTTCTATTTTATTTGATTCTTTTGATAATGAAGGTAAAATGAGTTTTGAATAAGCATTTACCATTTTTATGTTGGAAATATAGAAATGAAACAAATATGGTTTTTCTATATGAAATCATAAAATTACTTATTTTGTGAAAAAACCATGACTCTAAAACAAAGAAAATTAACATTTATCTTAAGTTATTCTTGTTTCCCTTTTAAGTTAAGCACATAATTTAACCCTATACCTATAACTTTATTATTATTTTTTTTTACAGCTAAACTCAAACATTTTTCTTATTAATATTTGCAAAATATGGTATTTGACGTAATGATGAAAATAAACAAAAAATTCAGGAAAAAAAATAATTAGCTTGAACCTTTGATTCAAAACCTAATGTTAAACATATCAACATTGCAAGACTATTTTATCCTATACTATAATAATCTGCATCCCAAACACAGACTATTTTATCCCATACTATAATAATCTTCACCCCAAACACAAACTATTTTATCACAGATTATAATAATCTGCACCCCAAACACAGACTATTATAACCCCCACACTATTATAATCCCACAGCTATTATAACCCCATCTATTATAACCAACCCAGTGCCCCAAACAATCCCTAGGGCCCGTTTGGTACAAGGTTTCTGGAGATGGGAATGGGCAAGGGTTTATAATACCCTTGTTTGTTTCAAGATTTCTGTGGTGGGCCCAGGAAATAACTCATTCCTAGGCATCATTTATGCCCATAAGCAAGGGTTTTCTATGCCCTTGCAAAAGCATGAGTTTTCTCTTTTCTCATCTCTTCTTTGTTATTTTTATATGCAATTTTATTTTGAATATAGTTAATTTCAATTTTTTAAGTAAATACTTTTTTAGGACTTTTAAACAAATACTTAGTCCAATTTTATTGTAGGGATGGTAATTACATATTACTAAAATTATAATTCATTAGTTAATATTATCGAAAATATATTTAATTATTGAATTAAAATCATTTAAATTAATTTAGTATAAAAATTAATTTTTCAATAATTATAATTAATTACTTATTGATTATTTATAATCCATTAATTACTTTTTTTGGATTTCCTTATAATAAATATATAATTATATTATTATTAAATATTTATCTAATTATTTTTTTTTGAAAAGTTATCTAATTAATTTTTATGGATACAATATATTAAATTATTGTACTTAAAAATATTTATTAAACAATTAATTAAATAATTTTAAGTTGTTAAATTAACATAGTTTATCCCATTAAAATTATTTCATGATTATTATTTCATTAATTTTTATTAATAGTTTGAACTAATTTTGATTATTTTATTGATTAATTTATTAAAATTACATAAAGTTTACCCGATTAATTCTAAAAAAATAAATACAGACATAATTTGTTCTCATAAAATCCGGATGACATTCTCATGCACAACCAAACACAGTTATCTTTGATTCCCAGCAATCTTATTCTCAGGCATAGTATTCCCAGGCATCATGTATTCCAAGGCATCTATAAAACCTTAAACCAAACGGACCCTTAAGTTATTAGAAATTTTTCCATTGGGAAGCGGGTCTTTGGTTTTGCAGATGCGGCTATGGAGCTACGCTTACGTCCGCCGCCGTACGTGATCAGATTTGGCGTTCGACTCTCCATCACGCCGCCTAAACGCCACGACGGCTTCGGCACTCATCATTTTCGGCCAAATCTGCTGGTCAAATGTGCTACACTCACCAAACAGAGCCACCGATTCCTCTCCACTTTGGCCACAACCGCCGCCACCGGCGACCAATCAGCAACCAATCGCTTGATTAAAAAGTTTGTAGCGAGTTCTCCGAAATCTATTACTCTCAATGTCCTCTCCAATATCGTCTCCCCTCACACGGCTCAACCTGGACTCTGCTCTGTTGCTCTCGCCGTAAGTAGGGCTTTTTTTTCCTCTTCATCGCATTATTCTTGCTTGGCTTTCGAGAAGATCGAGGTGAAATTTGGATTTCCAGGTCTTAGATTTTCGCTTCCCTTAGGTTTTCTTTTCATCGAATTCATCCGAAATTTGTTCAACTTTTGTCTCAAAATCCTCATGTTCTTGCAGTTATATTGTAGAATTACTGAAGCATCCTGGTTCACATGGAATTCCAAGCTAGTTGCTGACCTTGTTGCCTACCTCGATAAAAATGGACTGTACAGTGAGTCGGAAGCCCTAATTTTTGAGGCAGTTTCGAAGTTAGGGTTCCAGGAAAGAAAGCTTGTGAGTTTCTACTGCCAACTGATTGAATCTCAATCCAAACACGGTTCAGAAATTGGATTTGGTAACTCTTATGCTCGCCTTCTTGAGCTTCTTTACAATTCGTCATCGGTTTATGTTAGACAGCGAGCTTATGAATCAATGGTTACTGGTTTGTGCTCCATGAAAAGACCACAGGAAGCTGAGAGTTTTGTAGAAGAAATGAGAGGGAAAGGAATTAACCCTTCTGCATTTGAATATAGGTCCATTGTTTACGCTTATGGAACATTGGGATTATTTGAAGATATGAATAGGAGTTTGGAACAGATGGTGAATGATGATATTGCCATCGACACAGTTTGTTCCAACATGGTACTTTCATCGTATGGAGCTCATAATAAGCTTGCAAATATGGTCATGTGGCTTCAAAGAATGAAAACGTCCGCTCTTCCTTTCTCCGTTCGGACTTACAATTCTGTCTTAAGTTCATGTCCGAAGACAATGTCGATGCTACGAGACACAGGCAGTGATCTTCCAGTTTCGATCAAAGACTTGATCGCGGCTCTGGAGGGCGATGAAGCTTTGTTGGTTGGAGAGTTGGTTGGTTCATCTGTTTTGACAGAAGTAATGGATTGGGATGCAATGGAGCTGAAGTTGGACTTACATGGAGCACACATTGGTGCAGCTTATGTGATCATGTTGCAGTGGATGAAGGAGATGAGACTTAACTTTGAGGATGAAAACAGTGTGATCCCAGCACAAGTTACAGTGATTTGTGGATCTGGAAATCATAGTATTGTTAGAGGAGAGTCTCCTGTAAAAGCTCTGATTAAAAAGATTACGGTTTGGACGGGAAGTCCTTTGAGAATTGATCGTAAGAACACTGGTTGCTTTGTCTCCAAAGGAAAAGCAGTAAAGAATTGGTTATGTTTAAGAGGAATATAA

mRNA sequence

ATGAACTTGGATAAAGCGGATTTAAGCTCGACATTTTCACGAACAGCAACTATTTGTCTCTTCAACAACATTGCTTTGGGTTGGACACAAGCATCATTGTTGTACTACTTAAAGGCTCGTTTTCACTCCAACAAAGACCAATTTGCTAGCTTATTGATAATTATTGGGGGTCTGGGGGCCATTTCACAGGCCATTGTGGCTTCTTCCTTGTCAGCTATGATAGGAGATAAAAACTTGCTTTCAGTTTCTCTCTTTGCAACCTTTATACAATTCTTAATTTTGAGCATATCTTGGTCATTTTGGGTCGTTTATGCTTCATATTCAGCACTTTTTCTTCTTTCTTGGTGCGTAATTCCGGCGACATCCAGTATTGCATCAAAGCAAGTCGAGGCTCACGAGCAGGGAAAAGCTCAAGGTTGCATTTTTGGCATTCAAAGCTTTGCTTATGCTATATCTCCATTAGCTTTCAATCCGGTTGCAGCTCTTTTCTTATCTGAGAACGCACCATTTGACTTTCCTGGCTTTATTATTTTGTGCCTTGGATTTTTTCCGTTGGTGGCCTTTGTATTGAGCCTTAGGATCAAAGTAAATCCGTCCATTTCAAGTGAAGAAGATGCGGCTATGGAGCTACGCTTACGTCCGCCGCCGTACGTGATCAGATTTGGCGTTCGACTCTCCATCACGCCGCCTAAACGCCACGACGGCTTCGGCACTCATCATTTTCGGCCAAATCTGCTGGTCAAATGTGCTACACTCACCAAACAGAGCCACCGATTCCTCTCCACTTTGGCCACAACCGCCGCCACCGGCGACCAATCAGCAACCAATCGCTTGATTAAAAAGTTTGTAGCGAGTTCTCCGAAATCTATTACTCTCAATGTCCTCTCCAATATCGTCTCCCCTCACACGGCTCAACCTGGACTCTGCTCTGTTGCTCTCGCCTTATATTGTAGAATTACTGAAGCATCCTGGTTCACATGGAATTCCAAGCTAGTTGCTGACCTTGTTGCCTACCTCGATAAAAATGGACTGTACAGTGAGTCGGAAGCCCTAATTTTTGAGGCAGTTTCGAAGTTAGGGTTCCAGGAAAGAAAGCTTGTGAGTTTCTACTGCCAACTGATTGAATCTCAATCCAAACACGGTTCAGAAATTGGATTTGGTAACTCTTATGCTCGCCTTCTTGAGCTTCTTTACAATTCGTCATCGGTTTATGTTAGACAGCGAGCTTATGAATCAATGGTTACTGGTTTGTGCTCCATGAAAAGACCACAGGAAGCTGAGAGTTTTGTAGAAGAAATGAGAGGGAAAGGAATTAACCCTTCTGCATTTGAATATAGGTCCATTGTTTACGCTTATGGAACATTGGGATTATTTGAAGATATGAATAGGAGTTTGGAACAGATGGTGAATGATGATATTGCCATCGACACAGTTTGTTCCAACATGGTACTTTCATCGTATGGAGCTCATAATAAGCTTGCAAATATGGTCATGTGGCTTCAAAGAATGAAAACGTCCGCTCTTCCTTTCTCCGTTCGGACTTACAATTCTGTCTTAAGTTCATGTCCGAAGACAATGTCGATGCTACGAGACACAGGCAGTGATCTTCCAGTTTCGATCAAAGACTTGATCGCGGCTCTGGAGGGCGATGAAGCTTTGTTGGTTGGAGAGTTGGTTGGTTCATCTGTTTTGACAGAAGTAATGGATTGGGATGCAATGGAGCTGAAGTTGGACTTACATGGAGCACACATTGGTGCAGCTTATGTGATCATGTTGCAGTGGATGAAGGAGATGAGACTTAACTTTGAGGATGAAAACAGTGTGATCCCAGCACAAGTTACAGTGATTTGTGGATCTGGAAATCATAGTATTGTTAGAGGAGAGTCTCCTGTAAAAGCTCTGATTAAAAAGATTACGGTTTGGACGGGAAGTCCTTTGAGAATTGATCGTAAGAACACTGGTTGCTTTGTCTCCAAAGGAAAAGCAGTAAAGAATTGGTTATGTTTAAGAGGAATATAA

Coding sequence (CDS)

ATGAACTTGGATAAAGCGGATTTAAGCTCGACATTTTCACGAACAGCAACTATTTGTCTCTTCAACAACATTGCTTTGGGTTGGACACAAGCATCATTGTTGTACTACTTAAAGGCTCGTTTTCACTCCAACAAAGACCAATTTGCTAGCTTATTGATAATTATTGGGGGTCTGGGGGCCATTTCACAGGCCATTGTGGCTTCTTCCTTGTCAGCTATGATAGGAGATAAAAACTTGCTTTCAGTTTCTCTCTTTGCAACCTTTATACAATTCTTAATTTTGAGCATATCTTGGTCATTTTGGGTCGTTTATGCTTCATATTCAGCACTTTTTCTTCTTTCTTGGTGCGTAATTCCGGCGACATCCAGTATTGCATCAAAGCAAGTCGAGGCTCACGAGCAGGGAAAAGCTCAAGGTTGCATTTTTGGCATTCAAAGCTTTGCTTATGCTATATCTCCATTAGCTTTCAATCCGGTTGCAGCTCTTTTCTTATCTGAGAACGCACCATTTGACTTTCCTGGCTTTATTATTTTGTGCCTTGGATTTTTTCCGTTGGTGGCCTTTGTATTGAGCCTTAGGATCAAAGTAAATCCGTCCATTTCAAGTGAAGAAGATGCGGCTATGGAGCTACGCTTACGTCCGCCGCCGTACGTGATCAGATTTGGCGTTCGACTCTCCATCACGCCGCCTAAACGCCACGACGGCTTCGGCACTCATCATTTTCGGCCAAATCTGCTGGTCAAATGTGCTACACTCACCAAACAGAGCCACCGATTCCTCTCCACTTTGGCCACAACCGCCGCCACCGGCGACCAATCAGCAACCAATCGCTTGATTAAAAAGTTTGTAGCGAGTTCTCCGAAATCTATTACTCTCAATGTCCTCTCCAATATCGTCTCCCCTCACACGGCTCAACCTGGACTCTGCTCTGTTGCTCTCGCCTTATATTGTAGAATTACTGAAGCATCCTGGTTCACATGGAATTCCAAGCTAGTTGCTGACCTTGTTGCCTACCTCGATAAAAATGGACTGTACAGTGAGTCGGAAGCCCTAATTTTTGAGGCAGTTTCGAAGTTAGGGTTCCAGGAAAGAAAGCTTGTGAGTTTCTACTGCCAACTGATTGAATCTCAATCCAAACACGGTTCAGAAATTGGATTTGGTAACTCTTATGCTCGCCTTCTTGAGCTTCTTTACAATTCGTCATCGGTTTATGTTAGACAGCGAGCTTATGAATCAATGGTTACTGGTTTGTGCTCCATGAAAAGACCACAGGAAGCTGAGAGTTTTGTAGAAGAAATGAGAGGGAAAGGAATTAACCCTTCTGCATTTGAATATAGGTCCATTGTTTACGCTTATGGAACATTGGGATTATTTGAAGATATGAATAGGAGTTTGGAACAGATGGTGAATGATGATATTGCCATCGACACAGTTTGTTCCAACATGGTACTTTCATCGTATGGAGCTCATAATAAGCTTGCAAATATGGTCATGTGGCTTCAAAGAATGAAAACGTCCGCTCTTCCTTTCTCCGTTCGGACTTACAATTCTGTCTTAAGTTCATGTCCGAAGACAATGTCGATGCTACGAGACACAGGCAGTGATCTTCCAGTTTCGATCAAAGACTTGATCGCGGCTCTGGAGGGCGATGAAGCTTTGTTGGTTGGAGAGTTGGTTGGTTCATCTGTTTTGACAGAAGTAATGGATTGGGATGCAATGGAGCTGAAGTTGGACTTACATGGAGCACACATTGGTGCAGCTTATGTGATCATGTTGCAGTGGATGAAGGAGATGAGACTTAACTTTGAGGATGAAAACAGTGTGATCCCAGCACAAGTTACAGTGATTTGTGGATCTGGAAATCATAGTATTGTTAGAGGAGAGTCTCCTGTAAAAGCTCTGATTAAAAAGATTACGGTTTGGACGGGAAGTCCTTTGAGAATTGATCGTAAGAACACTGGTTGCTTTGTCTCCAAAGGAAAAGCAGTAAAGAATTGGTTATGTTTAAGAGGAATATAA

Protein sequence

MNLDKADLSSTFSRTATICLFNNIALGWTQASLLYYLKARFHSNKDQFASLLIIIGGLGAISQAIVASSLSAMIGDKNLLSVSLFATFIQFLILSISWSFWVVYASYSALFLLSWCVIPATSSIASKQVEAHEQGKAQGCIFGIQSFAYAISPLAFNPVAALFLSENAPFDFPGFIILCLGFFPLVAFVLSLRIKVNPSISSEEDAAMELRLRPPPYVIRFGVRLSITPPKRHDGFGTHHFRPNLLVKCATLTKQSHRFLSTLATTAATGDQSATNRLIKKFVASSPKSITLNVLSNIVSPHTAQPGLCSVALALYCRITEASWFTWNSKLVADLVAYLDKNGLYSESEALIFEAVSKLGFQERKLVSFYCQLIESQSKHGSEIGFGNSYARLLELLYNSSSVYVRQRAYESMVTGLCSMKRPQEAESFVEEMRGKGINPSAFEYRSIVYAYGTLGLFEDMNRSLEQMVNDDIAIDTVCSNMVLSSYGAHNKLANMVMWLQRMKTSALPFSVRTYNSVLSSCPKTMSMLRDTGSDLPVSIKDLIAALEGDEALLVGELVGSSVLTEVMDWDAMELKLDLHGAHIGAAYVIMLQWMKEMRLNFEDENSVIPAQVTVICGSGNHSIVRGESPVKALIKKITVWTGSPLRIDRKNTGCFVSKGKAVKNWLCLRGI

Homology

[Close]

BLAST of Lag0009344 vs. NCBI nr
Match: XP_023512520.1 (pentatricopeptide repeat-containing protein At2g17033 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 739.2 bits (1907), Expect = 3.2e-209
Identity = 372/459 (81.05%), Postives = 409/459 (89.11%), Query Frame = 0


Query: 208 MELRLRPPPYVIRFGVRLSITPPKRHDGFGTHHFRPNLLVKCATLTKQSHRFLSTLATTA 267
           MELRL PPPYVI   VRL    PKR+DGF ++HFRPNL VKCATLTKQSHRFLSTLATTA
Sbjct: 1   MELRLCPPPYVIGDSVRLFSKAPKRYDGFCSYHFRPNLQVKCATLTKQSHRFLSTLATTA 60

Query: 268 ATGDQSATNRLIKKFVASSPKSITLNVLSNIVSPHTAQPGLCSVALALYCRITEASWFTW 327
           A GD SATNRLI+KFVASSPKSITLNVLS+I+S  TAQPGLCSVAL LY RITE SWFTW
Sbjct: 61  AAGDHSATNRLIRKFVASSPKSITLNVLSDILSSRTAQPGLCSVALTLYSRITETSWFTW 120

Query: 328 NSKLVADLVAYLDKNGLYSESEALIFEAVSKLGFQERKLVSFYCQLIESQSKHGSEIGFG 387
           NSKLVADLVA+LDKNG   +SE LI EA+SKLG QERKLV+FYCQL+ESQSKHGSE GFG
Sbjct: 121 NSKLVADLVAFLDKNGQIVDSETLISEAISKLGIQERKLVNFYCQLVESQSKHGSERGFG 180

Query: 388 NSYARLLELLYNSSSVYVRQRAYESMVTGLCSMKRPQEAESFVEEMRGKGINPSAFEYRS 447
           N+YA LLELLYNSSS+YV++RAYESMVTGLCSMKRPQEAES V+EM+ KG  P+AFEYRS
Sbjct: 181 NAYACLLELLYNSSSIYVKRRAYESMVTGLCSMKRPQEAESLVKEMKAKGFAPAAFEYRS 240

Query: 448 IVYAYGTLGLFEDMNRSLEQMVNDDIAIDTVCSNMVLSSYGAHNKLANMVMWLQRMKTSA 507
           I+YAYGTLGLFEDM RSLE+M NDDIA+DTVCSNMVLSSYGAHNKLA+MV+WLQ MKTSA
Sbjct: 241 IIYAYGTLGLFEDMKRSLEEMKNDDIALDTVCSNMVLSSYGAHNKLADMVLWLQIMKTSA 300

Query: 508 LPFSVRTYNSVLSSCPKTMSMLRDTGSDLPVSIKDLIAALEGDEALLVGELVGSSVLTEV 567
           LPFSVRTYNSVL+SCPK  S+L+D   DLPV I+DLI  L+GDEALLV ELVGSSVL EV
Sbjct: 301 LPFSVRTYNSVLNSCPKITSILQDKSGDLPVLIEDLITVLDGDEALLVEELVGSSVLKEV 360

Query: 568 MDWDAMELKLDLHGAHIGAAYVIMLQWMKEMRLNFEDENSVIPAQVTVICGSGNHSIVRG 627
           M WDAME+KLDLHG H+GAAYVI+L+WMKEMRL FEDE+ VIPAQVTVICGSGNHSIVRG
Sbjct: 361 MVWDAMEMKLDLHGVHVGAAYVIILEWMKEMRLKFEDESCVIPAQVTVICGSGNHSIVRG 420

Query: 628 ESPVKALIKKITVWTGSPLRIDRKNTGCFVSKGKAVKNW 667
           ESPVKALI++I   T SPLRIDRKNTGCF++KGKAVKNW
Sbjct: 421 ESPVKALIREIMFRTQSPLRIDRKNTGCFLAKGKAVKNW 459

[Close]

BLAST of Lag0009344 vs. NCBI nr
Match: KAG7010834.1 (Pentatricopeptide repeat-containing protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 735.7 bits (1898), Expect = 3.5e-208
Identity = 371/459 (80.83%), Postives = 407/459 (88.67%), Query Frame = 0


Query: 208 MELRLRPPPYVIRFGVRLSITPPKRHDGFGTHHFRPNLLVKCATLTKQSHRFLSTLATTA 267
           MELR  PPPYVI   VRL    PKR+D F ++HFRPNL VKCATLTKQSHRFLSTLATTA
Sbjct: 1   MELRFCPPPYVIGDSVRLFSKAPKRYDRFCSYHFRPNLQVKCATLTKQSHRFLSTLATTA 60

Query: 268 ATGDQSATNRLIKKFVASSPKSITLNVLSNIVSPHTAQPGLCSVALALYCRITEASWFTW 327
           A GD SATNRLI+KFVASSPKS+TLNVLS+I+S  TAQPGLCSVAL LY RITE SWFTW
Sbjct: 61  AAGDHSATNRLIRKFVASSPKSLTLNVLSDILSSRTAQPGLCSVALTLYSRITETSWFTW 120

Query: 328 NSKLVADLVAYLDKNGLYSESEALIFEAVSKLGFQERKLVSFYCQLIESQSKHGSEIGFG 387
           NSKLVADLVA+LDKNG   +SE LI EA+SKLG QERKLV+FYCQL+ESQSKHGSE GFG
Sbjct: 121 NSKLVADLVAFLDKNGQIVDSETLISEAISKLGIQERKLVNFYCQLVESQSKHGSERGFG 180

Query: 388 NSYARLLELLYNSSSVYVRQRAYESMVTGLCSMKRPQEAESFVEEMRGKGINPSAFEYRS 447
           N+YARLLELLYNSSS+YV++RAYESMVTGLCSMKRPQEAES V+EM+ KG  P+AFEYRS
Sbjct: 181 NAYARLLELLYNSSSIYVKRRAYESMVTGLCSMKRPQEAESLVKEMKAKGFAPAAFEYRS 240

Query: 448 IVYAYGTLGLFEDMNRSLEQMVNDDIAIDTVCSNMVLSSYGAHNKLANMVMWLQRMKTSA 507
           I+YAYGTLGLFEDM RSLE+M NDDIA+DTVCSNMVLSSYG HNKLA+MV+WLQ MKTSA
Sbjct: 241 IIYAYGTLGLFEDMKRSLEEMKNDDIALDTVCSNMVLSSYGVHNKLADMVLWLQIMKTSA 300

Query: 508 LPFSVRTYNSVLSSCPKTMSMLRDTGSDLPVSIKDLIAALEGDEALLVGELVGSSVLTEV 567
           LPFSVRTYNSVL+SC K  SML+D   DLPV I+DLI  L+GDEALLV ELVGSSVL EV
Sbjct: 301 LPFSVRTYNSVLNSCLKITSMLQDKSGDLPVLIEDLITVLDGDEALLVEELVGSSVLKEV 360

Query: 568 MDWDAMELKLDLHGAHIGAAYVIMLQWMKEMRLNFEDENSVIPAQVTVICGSGNHSIVRG 627
           M WDAME+KLDLHGAH+GAAYVI+L+WMKEMRL FEDE+ VIPAQVTVICGSGNHSIVRG
Sbjct: 361 MVWDAMEMKLDLHGAHVGAAYVIILEWMKEMRLKFEDESCVIPAQVTVICGSGNHSIVRG 420

Query: 628 ESPVKALIKKITVWTGSPLRIDRKNTGCFVSKGKAVKNW 667
           ESPVKALI++I   T SPLRIDRKNTGCFV+KGKAVKNW
Sbjct: 421 ESPVKALIREIMFRTQSPLRIDRKNTGCFVAKGKAVKNW 459

[Close]

BLAST of Lag0009344 vs. NCBI nr
Match: XP_022943803.1 (pentatricopeptide repeat-containing protein At2g17033 isoform X1 [Cucurbita moschata])

HSP 1 Score: 734.6 bits (1895), Expect = 7.8e-208
Identity = 371/459 (80.83%), Postives = 406/459 (88.45%), Query Frame = 0


Query: 208 MELRLRPPPYVIRFGVRLSITPPKRHDGFGTHHFRPNLLVKCATLTKQSHRFLSTLATTA 267
           MELR  PPPYVI   VRL    PKR+DGF ++HFRPNL VKCATLTKQSHRFLSTLATTA
Sbjct: 1   MELRFCPPPYVIGDSVRLFSKAPKRYDGFCSYHFRPNLQVKCATLTKQSHRFLSTLATTA 60

Query: 268 ATGDQSATNRLIKKFVASSPKSITLNVLSNIVSPHTAQPGLCSVALALYCRITEASWFTW 327
           A GD SATNRLI+KFVASSPKSITLNVLS+I+S  TAQPGLCSVAL LY RITE SWFTW
Sbjct: 61  AAGDHSATNRLIRKFVASSPKSITLNVLSDILSSRTAQPGLCSVALTLYSRITETSWFTW 120

Query: 328 NSKLVADLVAYLDKNGLYSESEALIFEAVSKLGFQERKLVSFYCQLIESQSKHGSEIGFG 387
           NSKLVADLVA+LDKNG   +SE LI EA+SKLG QERKLV+FYCQL+ESQSKHGSE GFG
Sbjct: 121 NSKLVADLVAFLDKNGQIVDSETLISEAISKLGIQERKLVNFYCQLVESQSKHGSERGFG 180

Query: 388 NSYARLLELLYNSSSVYVRQRAYESMVTGLCSMKRPQEAESFVEEMRGKGINPSAFEYRS 447
            +YA LLELLY SSS+YV++RAYESMVTGLCSMKRPQEAES V+EM+ KG  P+AFEYRS
Sbjct: 181 IAYACLLELLYKSSSIYVKRRAYESMVTGLCSMKRPQEAESLVKEMKAKGFAPAAFEYRS 240

Query: 448 IVYAYGTLGLFEDMNRSLEQMVNDDIAIDTVCSNMVLSSYGAHNKLANMVMWLQRMKTSA 507
           I+YAYGTLGLFEDM RSLE+M NDDIA+DTVCSNMVLSSYG HNKLA+MV+WLQ MKTSA
Sbjct: 241 IIYAYGTLGLFEDMKRSLEEMKNDDIALDTVCSNMVLSSYGVHNKLADMVLWLQIMKTSA 300

Query: 508 LPFSVRTYNSVLSSCPKTMSMLRDTGSDLPVSIKDLIAALEGDEALLVGELVGSSVLTEV 567
           LPFSVRTYNSVL+SCPK  SML+D   DLPV I+DLI  L+GDEALLV ELVGSSVL EV
Sbjct: 301 LPFSVRTYNSVLNSCPKITSMLQDKSDDLPVLIEDLITVLDGDEALLVEELVGSSVLKEV 360

Query: 568 MDWDAMELKLDLHGAHIGAAYVIMLQWMKEMRLNFEDENSVIPAQVTVICGSGNHSIVRG 627
           M WDAME+KLDLHGAH+GAAYVI+L+WMKEMRL FEDE+ VIPAQVTVICGSGNHSIVRG
Sbjct: 361 MVWDAMEMKLDLHGAHVGAAYVIILEWMKEMRLKFEDESCVIPAQVTVICGSGNHSIVRG 420

Query: 628 ESPVKALIKKITVWTGSPLRIDRKNTGCFVSKGKAVKNW 667
           ESPVKALI++I   T SPLRIDRKNTGCFV+KGKAVKNW
Sbjct: 421 ESPVKALIREIMFRTQSPLRIDRKNTGCFVAKGKAVKNW 459

[Close]

BLAST of Lag0009344 vs. NCBI nr
Match: XP_038902941.1 (pentatricopeptide repeat-containing protein At2g17033 [Benincasa hispida])

HSP 1 Score: 728.4 bits (1879), Expect = 5.6e-206
Identity = 377/465 (81.08%), Postives = 413/465 (88.82%), Query Frame = 0


Query: 208 MELRLRPPPYVIRFGVRLSITPPKRHDGFGTHHFRPNLLVKCATLTKQSHRFLSTLATTA 267
           MELRL  PP+VI  GVRL + P K HDGF ++ F PNL VKC TLTKQ+HRFLSTLATTA
Sbjct: 1   MELRLYLPPFVIGDGVRLFLKPFKLHDGFRSYPFVPNLQVKCTTLTKQTHRFLSTLATTA 60

Query: 268 ATGDQSATNRLIKKFVASSPKSITLNVLSNIVSPHTAQPGLCSVALALYCRITEASWFTW 327
           ATGDQSATNRLI+KFVASSPKSITLNVLSNIVSPHTAQPGLCSVAL LY RITEASWFTW
Sbjct: 61  ATGDQSATNRLIRKFVASSPKSITLNVLSNIVSPHTAQPGLCSVALTLYSRITEASWFTW 120

Query: 328 NSKLVADLVAYLDKNGLYSESEALIFEAVSKLGFQERKLVSFYCQLIESQSKHGSEIGFG 387
           NSKLVADL+A+LD+NGL+SESEALI E +SKLGFQERKLV+FY QLIESQSKHGSE GFG
Sbjct: 121 NSKLVADLIAFLDQNGLHSESEALISETISKLGFQERKLVNFYFQLIESQSKHGSERGFG 180

Query: 388 NSYARLLELLYNSSSVYVRQRAYESMVTGLCSMKRPQEAESFVEEMRGKGINPSAFEYRS 447
           NSY RLLE LYNS SVYV++RAYESMVTGLCSMKRPQEAES VEEMR KGI PSA+EYRS
Sbjct: 181 NSYTRLLEFLYNSPSVYVKRRAYESMVTGLCSMKRPQEAESLVEEMRSKGITPSAYEYRS 240

Query: 448 IVYAYGTLGLFEDMNRSLEQMVNDDIAIDTVCSNMVLSSYGAHNKLANMVMWLQRMKTSA 507
           I+YAYGTLGLFEDM R+L+QM NDD A+DTVCSNMVLSSYGAHNKLA+MV+WLQR KTS 
Sbjct: 241 IIYAYGTLGLFEDMKRTLKQMENDDYALDTVCSNMVLSSYGAHNKLADMVLWLQRTKTST 300

Query: 508 L-PFSVRTYNSVLSSCPKTMSMLRDTGS-DLPVSIKDLIAALEG-DEALLVGEL-VGSSV 567
           L  FSVRTYNSVL+SCPK  S+L+D  S + PV I+DL+A L+G +EALLV EL VGSSV
Sbjct: 301 LCNFSVRTYNSVLNSCPKITSLLQDPKSGEFPVLIEDLVAVLDGHEEALLVEELVVGSSV 360

Query: 568 LTEVMDWDAMELKLDLHGAHIGAAYVIMLQWMKEMRLNFEDENSVIPAQVTVICGSGNHS 627
           L EVM WDAMELKLDLHGAH+G AYVIMLQWMKEMRL FEDE+ +IPAQVT+I GSGNHS
Sbjct: 361 LKEVMVWDAMELKLDLHGAHVGTAYVIMLQWMKEMRLKFEDESCMIPAQVTLISGSGNHS 420

Query: 628 IVRGESPVKALIKKITVWTGSPLRIDRKNTGCFVSKGKAVKNWLC 669
           IVRGESPVKALIK+I + T SPLRIDRKNTGCF+SKGKAVKNWLC
Sbjct: 421 IVRGESPVKALIKEILIRTESPLRIDRKNTGCFISKGKAVKNWLC 465

[Close]

BLAST of Lag0009344 vs. NCBI nr
Match: XP_022985638.1 (pentatricopeptide repeat-containing protein At2g17033 isoform X1 [Cucurbita maxima])

HSP 1 Score: 724.2 bits (1868), Expect = 1.1e-204
Identity = 367/459 (79.96%), Postives = 404/459 (88.02%), Query Frame = 0


Query: 208 MELRLRPPPYVIRFGVRLSITPPKRHDGFGTHHFRPNLLVKCATLTKQSHRFLSTLATTA 267
           MELRL PPPYVI   VRL    PKR+DGF ++HFRPNL VKCATLTKQSHRFLSTLATTA
Sbjct: 1   MELRLCPPPYVIGDSVRLFSKAPKRYDGFCSYHFRPNLQVKCATLTKQSHRFLSTLATTA 60

Query: 268 ATGDQSATNRLIKKFVASSPKSITLNVLSNIVSPHTAQPGLCSVALALYCRITEASWFTW 327
           A GD SATNRLI+KFVASSPKSITLNVLS+I+S  TAQPGLCSVA  LY RITE SWF W
Sbjct: 61  AAGDHSATNRLIRKFVASSPKSITLNVLSDILSSRTAQPGLCSVARILYSRITETSWFAW 120

Query: 328 NSKLVADLVAYLDKNGLYSESEALIFEAVSKLGFQERKLVSFYCQLIESQSKHGSEIGFG 387
           NSKLVADLVA+LDKNG   +SE LI EA+SKLG QERKLV+FYCQL+ESQSKHGSE GF 
Sbjct: 121 NSKLVADLVAFLDKNGQIVDSETLISEAISKLGIQERKLVNFYCQLVESQSKHGSERGFR 180

Query: 388 NSYARLLELLYNSSSVYVRQRAYESMVTGLCSMKRPQEAESFVEEMRGKGINPSAFEYRS 447
           N+YA L ELLYNSSS+YV++RAYESMVTGLCSMKRPQEAES V+EM+ KG  P+AFEYRS
Sbjct: 181 NAYACLHELLYNSSSIYVKRRAYESMVTGLCSMKRPQEAESLVKEMKAKGFAPAAFEYRS 240

Query: 448 IVYAYGTLGLFEDMNRSLEQMVNDDIAIDTVCSNMVLSSYGAHNKLANMVMWLQRMKTSA 507
           I+YAYGTLGLFEDM RSLE+M ND IA+DTVCSNMVLSSYG HNKLA+MV+WLQ MKTSA
Sbjct: 241 IIYAYGTLGLFEDMKRSLEEMKNDHIALDTVCSNMVLSSYGVHNKLADMVLWLQIMKTSA 300

Query: 508 LPFSVRTYNSVLSSCPKTMSMLRDTGSDLPVSIKDLIAALEGDEALLVGELVGSSVLTEV 567
           LPFSVRTYNSVL+SCPK  SML+D   DLPV I+DLI+ L+GDEALLV ELVGSSVL EV
Sbjct: 301 LPFSVRTYNSVLNSCPKITSMLQDKSGDLPVLIEDLISVLDGDEALLVEELVGSSVLREV 360

Query: 568 MDWDAMELKLDLHGAHIGAAYVIMLQWMKEMRLNFEDENSVIPAQVTVICGSGNHSIVRG 627
           M WDAME+KLDLHGAH+GAAYVI+L+WMKEMRL FE+E+ VIPAQVTVICGSGNHSIVR 
Sbjct: 361 MVWDAMEMKLDLHGAHVGAAYVIILEWMKEMRLKFENESCVIPAQVTVICGSGNHSIVRR 420

Query: 628 ESPVKALIKKITVWTGSPLRIDRKNTGCFVSKGKAVKNW 667
           ESPVKALI++I   T SPLRIDRKNTGCFV+KGKAVKNW
Sbjct: 421 ESPVKALIREIMFRTQSPLRIDRKNTGCFVAKGKAVKNW 459

[Close]

BLAST of Lag0009344 vs. ExPASy Swiss-Prot
Match: Q8GWA9 (Pentatricopeptide repeat-containing protein At2g17033 OS=Arabidopsis thaliana OX=3702 GN=At2g17033 PE=2 SV=1)

HSP 1 Score: 471.5 bits (1212), Expect = 1.6e-131
Identity = 240/417 (57.55%), Postives = 304/417 (72.90%), Query Frame = 0


Query: 252 LTKQSHRFLSTLATTAATGDQSATNRLIKKFVASSPKSITLNVLSNIVSPHTAQPGLCSV 311
           L K   RFLS+L++ A  GD SA NR IKKFVA+SPKS+ LNVLS+++S  T+ P L   
Sbjct: 89  LMKHGDRFLSSLSSPALAGDPSAINRHIKKFVAASPKSVALNVLSHLLSDQTSHPHLSFF 148

Query: 312 ALALYCRITEASWFTWNSKLVADLVAYLDKNGLYSESEALIFEAVSKLGFQERKLVSFYC 371
           AL+LY  ITEASWF WN KL+A+L+A L+K   + ESE L+  AVS+L   ER    F C
Sbjct: 149 ALSLYSEITEASWFDWNPKLIAELIALLNKQERFDESETLLSTAVSRLKSNERDFTLFLC 208

Query: 372 QLIESQSKHGSEIGFGNSYARLLELLYNSSSVYVRQRAYESMVTGLCSMKRPQEAESFVE 431
            L+ES SK GS  GF  +  RL E++  SSSVYV+ +AY+SMV+GLC+M +P +AE  +E
Sbjct: 209 NLVESNSKQGSIQGFSEASFRLREIIQRSSSVYVKTQAYKSMVSGLCNMDQPHDAERVIE 268

Query: 432 EMRGKGINPSAFEYRSIVYAYGTLGLFEDMNRSLEQMVNDDIAIDTVCSNMVLSSYGAHN 491
           EMR + I P  FEY+S++Y YG LGLF+DMNR + +M  +   IDTVCSNMVLSSYGAH+
Sbjct: 269 EMRMEKIKPGLFEYKSVLYGYGRLGLFDDMNRVVHRMGTEGHKIDTVCSNMVLSSYGAHD 328

Query: 492 KLANMVMWLQRMKTSALPFSVRTYNSVLSSCPKTMSMLRDTGSDLPVSIKDLIAALEGDE 551
            L  M  WLQ++K   +PFS+RTYNSVL+SCP  +SML+D  S  PVS+ +L   L  DE
Sbjct: 329 ALPQMGSWLQKLKGFNVPFSIRTYNSVLNSCPTIISMLKDLDS-CPVSLSELRTFLNEDE 388

Query: 552 ALLVGELVGSSVLTEVMDWDAMELKLDLHGAHIGAAYVIMLQWMKEMRLNFEDENSVIPA 611
           ALLV EL  SSVL E ++W+A+E KLDLHG H+ ++Y+I+LQWM E RL F +E  VIPA
Sbjct: 389 ALLVHELTQSSVLDEAIEWNAVEGKLDLHGMHLSSSYLILLQWMDETRLRFSEEKCVIPA 448

Query: 612 QVTVICGSGNHSIVRGESPVKALIKKITVWTGSPLRIDRKNTGCFVSKGKAVKNWLC 669
           ++ V+ GSG HS VRGESPVKAL+KKI V TGSP+RIDRKN G F++KGK VK WLC
Sbjct: 449 EIVVVSGSGKHSNVRGESPVKALVKKIMVRTGSPMRIDRKNVGSFIAKGKTVKEWLC 504

[Close]

BLAST of Lag0009344 vs. ExPASy Swiss-Prot
Match: Q9SCP4 (Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana OX=3702 GN=At3g53170 PE=3 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 3.0e-08
Identity = 65/272 (23.90%), Postives = 115/272 (42.28%), Query Frame = 0


Query: 254 KQSHRFLSTLATTAATGDQSATNRLIKKFVASSPKSITLNVLSNIVSPHTAQPGLCSVAL 313
           K+  R L T A  A  G +   N   +K++   PK++ L  L   +  +  Q      AL
Sbjct: 29  KELSRILRTDA--AVKGIERKANS--EKYLTLWPKAV-LEALDEAIKENRWQS-----AL 88

Query: 314 ALYCRITEASWFTWNSKLVADLVAYLDKNGLYSESEALIFEAVSKLGFQERKLVSFYCQL 373
            ++  + +  W+    K    L   L  N    +  +L+FE +   G   +  +  Y  L
Sbjct: 89  KIFNLLRKQHWYEPRCKTYTKLFKVLG-NCKQPDQASLLFEVMLSEGL--KPTIDVYTSL 148

Query: 374 IESQSKHGSEIGFGNSYARLLELLYNSSSVYVRQRAYESMVTGLCSMKRPQEAESFVEEM 433
           I   S +G       +++  LE + + S        +  +++  C + R    +S V EM
Sbjct: 149 I---SVYGKSELLDKAFS-TLEYMKSVSDCKPDVFTFTVLISCCCKLGRFDLVKSIVLEM 208

Query: 434 RGKGINPSAFEYRSIVYAYGTLGLFEDMNRSLEQMVNDDIAIDTVCS-NMVLSSYGAHNK 493
              G+  S   Y +I+  YG  G+FE+M   L  M+ D  ++  VC+ N ++ SYG    
Sbjct: 209 SYLGVGCSTVTYNTIIDGYGKAGMFEEMESVLADMIEDGDSLPDVCTLNSIIGSYGNGRN 268

Query: 494 LANMVMWLQRMKTSALPFSVRTYNSVLSSCPK 525
           +  M  W  R +   +   + T+N ++ S  K
Sbjct: 269 MRKMESWYSRFQLMGVQPDITTFNILILSFGK 283

[Close]

BLAST of Lag0009344 vs. ExPASy Swiss-Prot
Match: Q9FKC3 (Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g48730 PE=2 SV=2)

HSP 1 Score: 60.1 bits (144), Expect = 1.1e-07
Identity = 57/255 (22.35%), Postives = 117/255 (45.88%), Query Frame = 0


Query: 272 QSATNRLIKKFVASSPKSITLNVLSNIVSPHTAQPGLCSVALALYCRITEASWFTWNSKL 331
           + AT  +I+K    S K +   VL ++    TA       A+ ++  + E  W+  N  +
Sbjct: 96  REATKSIIEK-KKGSKKLLPRTVLESLHERITAL--RWESAIQVFELLREQLWYKPNVGI 155

Query: 332 VADLVAYLDKNGLYSESEALIFEAVSKLGFQERKLVSFYCQLIESQSKHGSEIGFGNSYA 391
              L+  L K     ++  L  E +++      ++   Y  L+ + S+ G    F  ++ 
Sbjct: 156 YVKLIVMLGKCKQPEKAHELFQEMINEGCVVNHEV---YTALVSAYSRSGR---FDAAFT 215

Query: 392 RLLELLYNSSSVYVRQRAYESMVTGLCSMKRPQEAESFVEEMRGKGINPSAFEYRSIVYA 451
            LLE + +S +       Y  ++     +    + +  + +MR +GI P+   Y +++ A
Sbjct: 216 -LLERMKSSHNCQPDVHTYSILIKSFLQVFAFDKVQDLLSDMRRQGIRPNTITYNTLIDA 275

Query: 452 YGTLGLFEDMNRSLEQMV-NDDIAIDTVCSNMVLSSYGAHNKLANMVMWLQRMKTSALPF 511
           YG   +F +M  +L QM+  DD   D+   N  L ++G + ++  M    ++ ++S +  
Sbjct: 276 YGKAKMFVEMESTLIQMLGEDDCKPDSWTMNSTLRAFGGNGQIEMMENCYEKFQSSGIEP 335

Query: 512 SVRTYNSVLSSCPKT 526
           ++RT+N +L S  K+
Sbjct: 336 NIRTFNILLDSYGKS 340

[Close]

BLAST of Lag0009344 vs. ExPASy Swiss-Prot
Match: Q96MC6 (Hippocampus abundant transcript 1 protein OS=Homo sapiens OX=9606 GN=MFSD14A PE=1 SV=2)

HSP 1 Score: 50.4 bits (119), Expect = 8.9e-05
Identity = 36/133 (27.07%), Postives = 65/133 (48.87%), Query Frame = 0


Query: 31  ASLLYYLKARFHSNKDQFASLLIIIGGLGAISQAIVASSLSAMIGDKNLLSVSLFATFIQ 90
           +S   YL+     + +  A+ + ++G L  I+Q IV S L   IG+KN + + L    +Q
Sbjct: 265 SSFFLYLRQIMKFSPESVAAFIAVLGILSIIAQTIVLSLLMRSIGNKNTILLGLGFQILQ 324

Query: 91  FLILSISWSFWVVYASYSALFLLSWCVIPATSSIASKQVEAHEQGKAQGCIFGIQSFAYA 150
                     W+++A+  A+  +S    PA S++ S+  +A +QG  QG I GI+     
Sbjct: 325 LAWYGFGSEPWMMWAA-GAVAAMSSITFPAVSALVSRTADADQQGVVQGMITGIRGLCNG 384

Query: 151 ISPLAFNPVAALF 164
           + P  +  +  +F
Sbjct: 385 LGPALYGFIFYIF 396

[Close]

BLAST of Lag0009344 vs. ExPASy Swiss-Prot
Match: P70187 (Hippocampus abundant transcript 1 protein OS=Mus musculus OX=10090 GN=Mfsd14a PE=2 SV=3)

HSP 1 Score: 50.4 bits (119), Expect = 8.9e-05
Identity = 36/133 (27.07%), Postives = 65/133 (48.87%), Query Frame = 0


Query: 31  ASLLYYLKARFHSNKDQFASLLIIIGGLGAISQAIVASSLSAMIGDKNLLSVSLFATFIQ 90
           +S   YL+     + +  A+ + ++G L  I+Q IV S L   IG+KN + + L    +Q
Sbjct: 265 SSFFLYLRQIMKFSPESVAAFIAVLGILSIIAQTIVLSLLMRSIGNKNTILLGLGFQILQ 324

Query: 91  FLILSISWSFWVVYASYSALFLLSWCVIPATSSIASKQVEAHEQGKAQGCIFGIQSFAYA 150
                     W+++A+  A+  +S    PA S++ S+  +A +QG  QG I GI+     
Sbjct: 325 LAWYGFGSEPWMMWAA-GAVAAMSSITFPAVSALVSRTADADQQGVVQGMITGIRGLCNG 384

Query: 151 ISPLAFNPVAALF 164
           + P  +  +  +F
Sbjct: 385 LGPALYGFIFYIF 396

[Close]

BLAST of Lag0009344 vs. ExPASy TrEMBL
Match: A0A6J1FXE0 (pentatricopeptide repeat-containing protein At2g17033 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111448442 PE=3 SV=1)

HSP 1 Score: 734.6 bits (1895), Expect = 3.8e-208
Identity = 371/459 (80.83%), Postives = 406/459 (88.45%), Query Frame = 0


Query: 208 MELRLRPPPYVIRFGVRLSITPPKRHDGFGTHHFRPNLLVKCATLTKQSHRFLSTLATTA 267
           MELR  PPPYVI   VRL    PKR+DGF ++HFRPNL VKCATLTKQSHRFLSTLATTA
Sbjct: 1   MELRFCPPPYVIGDSVRLFSKAPKRYDGFCSYHFRPNLQVKCATLTKQSHRFLSTLATTA 60

Query: 268 ATGDQSATNRLIKKFVASSPKSITLNVLSNIVSPHTAQPGLCSVALALYCRITEASWFTW 327
           A GD SATNRLI+KFVASSPKSITLNVLS+I+S  TAQPGLCSVAL LY RITE SWFTW
Sbjct: 61  AAGDHSATNRLIRKFVASSPKSITLNVLSDILSSRTAQPGLCSVALTLYSRITETSWFTW 120

Query: 328 NSKLVADLVAYLDKNGLYSESEALIFEAVSKLGFQERKLVSFYCQLIESQSKHGSEIGFG 387
           NSKLVADLVA+LDKNG   +SE LI EA+SKLG QERKLV+FYCQL+ESQSKHGSE GFG
Sbjct: 121 NSKLVADLVAFLDKNGQIVDSETLISEAISKLGIQERKLVNFYCQLVESQSKHGSERGFG 180

Query: 388 NSYARLLELLYNSSSVYVRQRAYESMVTGLCSMKRPQEAESFVEEMRGKGINPSAFEYRS 447
            +YA LLELLY SSS+YV++RAYESMVTGLCSMKRPQEAES V+EM+ KG  P+AFEYRS
Sbjct: 181 IAYACLLELLYKSSSIYVKRRAYESMVTGLCSMKRPQEAESLVKEMKAKGFAPAAFEYRS 240

Query: 448 IVYAYGTLGLFEDMNRSLEQMVNDDIAIDTVCSNMVLSSYGAHNKLANMVMWLQRMKTSA 507
           I+YAYGTLGLFEDM RSLE+M NDDIA+DTVCSNMVLSSYG HNKLA+MV+WLQ MKTSA
Sbjct: 241 IIYAYGTLGLFEDMKRSLEEMKNDDIALDTVCSNMVLSSYGVHNKLADMVLWLQIMKTSA 300

Query: 508 LPFSVRTYNSVLSSCPKTMSMLRDTGSDLPVSIKDLIAALEGDEALLVGELVGSSVLTEV 567
           LPFSVRTYNSVL+SCPK  SML+D   DLPV I+DLI  L+GDEALLV ELVGSSVL EV
Sbjct: 301 LPFSVRTYNSVLNSCPKITSMLQDKSDDLPVLIEDLITVLDGDEALLVEELVGSSVLKEV 360

Query: 568 MDWDAMELKLDLHGAHIGAAYVIMLQWMKEMRLNFEDENSVIPAQVTVICGSGNHSIVRG 627
           M WDAME+KLDLHGAH+GAAYVI+L+WMKEMRL FEDE+ VIPAQVTVICGSGNHSIVRG
Sbjct: 361 MVWDAMEMKLDLHGAHVGAAYVIILEWMKEMRLKFEDESCVIPAQVTVICGSGNHSIVRG 420

Query: 628 ESPVKALIKKITVWTGSPLRIDRKNTGCFVSKGKAVKNW 667
           ESPVKALI++I   T SPLRIDRKNTGCFV+KGKAVKNW
Sbjct: 421 ESPVKALIREIMFRTQSPLRIDRKNTGCFVAKGKAVKNW 459

[Close]

BLAST of Lag0009344 vs. ExPASy TrEMBL
Match: A0A6J1JE75 (pentatricopeptide repeat-containing protein At2g17033 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111483639 PE=3 SV=1)

HSP 1 Score: 724.2 bits (1868), Expect = 5.1e-205
Identity = 367/459 (79.96%), Postives = 404/459 (88.02%), Query Frame = 0


Query: 208 MELRLRPPPYVIRFGVRLSITPPKRHDGFGTHHFRPNLLVKCATLTKQSHRFLSTLATTA 267
           MELRL PPPYVI   VRL    PKR+DGF ++HFRPNL VKCATLTKQSHRFLSTLATTA
Sbjct: 1   MELRLCPPPYVIGDSVRLFSKAPKRYDGFCSYHFRPNLQVKCATLTKQSHRFLSTLATTA 60

Query: 268 ATGDQSATNRLIKKFVASSPKSITLNVLSNIVSPHTAQPGLCSVALALYCRITEASWFTW 327
           A GD SATNRLI+KFVASSPKSITLNVLS+I+S  TAQPGLCSVA  LY RITE SWF W
Sbjct: 61  AAGDHSATNRLIRKFVASSPKSITLNVLSDILSSRTAQPGLCSVARILYSRITETSWFAW 120

Query: 328 NSKLVADLVAYLDKNGLYSESEALIFEAVSKLGFQERKLVSFYCQLIESQSKHGSEIGFG 387
           NSKLVADLVA+LDKNG   +SE LI EA+SKLG QERKLV+FYCQL+ESQSKHGSE GF 
Sbjct: 121 NSKLVADLVAFLDKNGQIVDSETLISEAISKLGIQERKLVNFYCQLVESQSKHGSERGFR 180

Query: 388 NSYARLLELLYNSSSVYVRQRAYESMVTGLCSMKRPQEAESFVEEMRGKGINPSAFEYRS 447
           N+YA L ELLYNSSS+YV++RAYESMVTGLCSMKRPQEAES V+EM+ KG  P+AFEYRS
Sbjct: 181 NAYACLHELLYNSSSIYVKRRAYESMVTGLCSMKRPQEAESLVKEMKAKGFAPAAFEYRS 240

Query: 448 IVYAYGTLGLFEDMNRSLEQMVNDDIAIDTVCSNMVLSSYGAHNKLANMVMWLQRMKTSA 507
           I+YAYGTLGLFEDM RSLE+M ND IA+DTVCSNMVLSSYG HNKLA+MV+WLQ MKTSA
Sbjct: 241 IIYAYGTLGLFEDMKRSLEEMKNDHIALDTVCSNMVLSSYGVHNKLADMVLWLQIMKTSA 300

Query: 508 LPFSVRTYNSVLSSCPKTMSMLRDTGSDLPVSIKDLIAALEGDEALLVGELVGSSVLTEV 567
           LPFSVRTYNSVL+SCPK  SML+D   DLPV I+DLI+ L+GDEALLV ELVGSSVL EV
Sbjct: 301 LPFSVRTYNSVLNSCPKITSMLQDKSGDLPVLIEDLISVLDGDEALLVEELVGSSVLREV 360

Query: 568 MDWDAMELKLDLHGAHIGAAYVIMLQWMKEMRLNFEDENSVIPAQVTVICGSGNHSIVRG 627
           M WDAME+KLDLHGAH+GAAYVI+L+WMKEMRL FE+E+ VIPAQVTVICGSGNHSIVR 
Sbjct: 361 MVWDAMEMKLDLHGAHVGAAYVIILEWMKEMRLKFENESCVIPAQVTVICGSGNHSIVRR 420

Query: 628 ESPVKALIKKITVWTGSPLRIDRKNTGCFVSKGKAVKNW 667
           ESPVKALI++I   T SPLRIDRKNTGCFV+KGKAVKNW
Sbjct: 421 ESPVKALIREIMFRTQSPLRIDRKNTGCFVAKGKAVKNW 459

[Close]

BLAST of Lag0009344 vs. ExPASy TrEMBL
Match: Q5DMV7 (Pentatricopeptide (PPR) repeat protein-like OS=Cucumis melo OX=3656 GN=PPR PE=3 SV=1)

HSP 1 Score: 712.6 bits (1838), Expect = 1.5e-201
Identity = 370/465 (79.57%), Postives = 410/465 (88.17%), Query Frame = 0


Query: 208 MELRLRPPPYVIRFGVRLSITPPKRHDGFGTHHFRPNLLVKCATLTKQSHRFLSTLATTA 267
           MELRL PPPYVI  GVRL + P KR DGF ++ F PNL VKC TLTKQ+HRFLSTL+TT 
Sbjct: 1   MELRLCPPPYVIGDGVRLFLQPLKRLDGFRSYPFLPNLQVKCTTLTKQTHRFLSTLSTTG 60

Query: 268 ATGDQSATNRLIKKFVASSPKSITLNVLSNIVSPHTAQPGLCSVALALYCRITEASWFTW 327
           ATGDQSATNRLI+KFVASSPKSITL+VLSNIVS HT QP LCS AL LY RITEASWFTW
Sbjct: 61  ATGDQSATNRLIRKFVASSPKSITLSVLSNIVSTHTPQPELCSAALTLYSRITEASWFTW 120

Query: 328 NSKLVADLVAYLDKNGLYSESEALIFEAVSKLGFQERKLVSFYCQLIESQSKHGSEIGFG 387
           NSKLVADLVA+L +NGLYSESEALI EA+SKLG QERKLV+FY QL+ESQSKHG E GFG
Sbjct: 121 NSKLVADLVAFLGQNGLYSESEALISEAISKLGSQERKLVNFYSQLVESQSKHGFERGFG 180

Query: 388 NSYARLLELLYNSSSVYVRQRAYESMVTGLCSMKRPQEAESFVEEMRGKGINPSAFEYRS 447
           +SY+RL ELLYNS SVYV++RAYESMVTGLCSMKRP EAES V+EMR KGI P+A+EYRS
Sbjct: 181 DSYSRLFELLYNSPSVYVKRRAYESMVTGLCSMKRPHEAESLVKEMRSKGITPTAYEYRS 240

Query: 448 IVYAYGTLGLFEDMNRSLEQMVNDDIAIDTVCSNMVLSSYGAHNKLANMVMWLQRMKTSA 507
           I+YAYGTLGLFE+M RSL+QM ND+I +DTVCSNMVLSSYGAHNKL +M++WLQRMKTS+
Sbjct: 241 IIYAYGTLGLFEEMKRSLKQMENDNIELDTVCSNMVLSSYGAHNKLGDMLLWLQRMKTSS 300

Query: 508 -LPFSVRTYNSVLSSCPKTMSMLRDTGS-DLPVSIKDLIAALEGD-EALLVGE-LVGSSV 567
               SVRTYNSVL+SCPK  SML+D  S DLPV I+DLIA L+GD EALLV E LVGSSV
Sbjct: 301 HCKSSVRTYNSVLNSCPKITSMLQDHKSGDLPVLIEDLIAILDGDEEALLVKELLVGSSV 360

Query: 568 LTEVMDWDAMELKLDLHGAHIGAAYVIMLQWMKEMRLNFEDENSVIPAQVTVICGSGNHS 627
           L E+M WDAMELKLDLHGAH+GAAYVIMLQW+KEMRLNFEDE++VIPAQVT+ICGSG HS
Sbjct: 361 LNEIMVWDAMELKLDLHGAHVGAAYVIMLQWIKEMRLNFEDESNVIPAQVTLICGSGKHS 420

Query: 628 IVRGESPVKALIKKITVWTGSPLRIDRKNTGCFVSKGKAVKNWLC 669
           IVRGESPVKALIK+I V T SPLRIDRKNTGCF+SKGKAVKNWLC
Sbjct: 421 IVRGESPVKALIKEIMVRTESPLRIDRKNTGCFISKGKAVKNWLC 465

[Close]

BLAST of Lag0009344 vs. ExPASy TrEMBL
Match: M4R4K5 (Pentatricopeptide (PPR) repeat protein-like OS=Cucumis melo OX=3656 GN=PPR PE=3 SV=1)

HSP 1 Score: 712.2 bits (1837), Expect = 2.0e-201
Identity = 371/465 (79.78%), Postives = 409/465 (87.96%), Query Frame = 0


Query: 208 MELRLRPPPYVIRFGVRLSITPPKRHDGFGTHHFRPNLLVKCATLTKQSHRFLSTLATTA 267
           MELRL PPPYVI  GVRL + P KR DGF ++ F PNL VKC TLTKQ+HRFLSTL+TTA
Sbjct: 1   MELRLCPPPYVIGDGVRLLLQPLKRLDGFRSYPFLPNLQVKCTTLTKQTHRFLSTLSTTA 60

Query: 268 ATGDQSATNRLIKKFVASSPKSITLNVLSNIVSPHTAQPGLCSVALALYCRITEASWFTW 327
           ATGDQSATNRLI+KFVASSPKSITL+VLSNIVS HT QP LCS AL LY RITEASWFTW
Sbjct: 61  ATGDQSATNRLIRKFVASSPKSITLSVLSNIVSTHTPQPELCSAALTLYSRITEASWFTW 120

Query: 328 NSKLVADLVAYLDKNGLYSESEALIFEAVSKLGFQERKLVSFYCQLIESQSKHGSEIGFG 387
           NSKLVADLVA+L +NGLYSESEALI EA+SKLG QERKLV+FY QL+ESQSKHG E GFG
Sbjct: 121 NSKLVADLVAFLGQNGLYSESEALISEAISKLGSQERKLVNFYSQLVESQSKHGFERGFG 180

Query: 388 NSYARLLELLYNSSSVYVRQRAYESMVTGLCSMKRPQEAESFVEEMRGKGINPSAFEYRS 447
           +SY+RL ELLYNS SVYV++RAYESMVTGLCSMKRP EAES V+EMR KGI P+A+EYRS
Sbjct: 181 DSYSRLFELLYNSPSVYVKRRAYESMVTGLCSMKRPHEAESLVKEMRSKGITPTAYEYRS 240

Query: 448 IVYAYGTLGLFEDMNRSLEQMVNDDIAIDTVCSNMVLSSYGAHNKLANMVMWLQRMKTSA 507
           I+YAYGTLGLFE+M RSL+QM ND+I +DTVCSNMVLSSYGAHNKL +M++WLQRMKTS 
Sbjct: 241 IIYAYGTLGLFEEMKRSLKQMENDNIELDTVCSNMVLSSYGAHNKLGDMLLWLQRMKTSP 300

Query: 508 -LPFSVRTYNSVLSSCPKTMSMLRDTGS-DLPVSIKDLIAALEGD-EALLVGE-LVGSSV 567
               SVRTYNSVL+SCPK  SML+D  S DLPV I+DLIA L+GD EALLV E LVGSSV
Sbjct: 301 HCKSSVRTYNSVLNSCPKITSMLQDHKSGDLPVLIEDLIAILDGDEEALLVKELLVGSSV 360

Query: 568 LTEVMDWDAMELKLDLHGAHIGAAYVIMLQWMKEMRLNFEDENSVIPAQVTVICGSGNHS 627
           L E+M WDAMELKLDLHGAH+GAAYVIMLQW+KEMRLNFEDE+ VIPAQVT+ICGSG HS
Sbjct: 361 LNEIMVWDAMELKLDLHGAHVGAAYVIMLQWIKEMRLNFEDESYVIPAQVTLICGSGKHS 420

Query: 628 IVRGESPVKALIKKITVWTGSPLRIDRKNTGCFVSKGKAVKNWLC 669
           IVRGESPVKALIK+I V T SPLRIDRKNTGCF+SKGKAVKNWLC
Sbjct: 421 IVRGESPVKALIKEIMVRTESPLRIDRKNTGCFISKGKAVKNWLC 465

[Close]

BLAST of Lag0009344 vs. ExPASy TrEMBL
Match: A0A6J1CF11 (pentatricopeptide repeat-containing protein At2g17033 OS=Momordica charantia OX=3673 GN=LOC111011095 PE=3 SV=1)

HSP 1 Score: 709.1 bits (1829), Expect = 1.7e-200
Identity = 363/465 (78.06%), Postives = 407/465 (87.53%), Query Frame = 0


Query: 207 AMELRLRPPPYVIRFGVRLSITPPKRHDGFGTHHFRPNLLVKCATLTKQSHRFLSTLATT 266
           +MELRL PPP+VI   VRLS+T             R  L V+C  LTKQSHRFLSTLATT
Sbjct: 4   SMELRLCPPPFVIGGSVRLSLT------------LRRLLPVRCTALTKQSHRFLSTLATT 63

Query: 267 AATGDQSATNRLIKKFVASSPKSITLNVLSNIVSPHTAQPGLCSVALALYCRITEASWFT 326
           AA GDQSATNRLI+KFVASSP+SI LNVLS I+S HT QP LC VAL LY RITEASWFT
Sbjct: 64  AAAGDQSATNRLIRKFVASSPRSIALNVLSRILSSHTPQPALCFVALTLYSRITEASWFT 123

Query: 327 WNSKLVADLVAYLDKNGLYSESEALIFEAVSKLGFQERKLVSFYCQLIESQSKHGSEIGF 386
           WNS+LVADLVA+LDK+G +++SEALI EA SKLGFQERKLVSFYCQL+ESQSKHGSE GF
Sbjct: 124 WNSRLVADLVAFLDKHGQFTDSEALISEATSKLGFQERKLVSFYCQLVESQSKHGSERGF 183

Query: 387 GNSYARLLELLYNSSSVYVRQRAYESMVTGLCSMKRPQEAESFVEEMRGKGINPSAFEYR 446
            NSY  LLELL+NS+SVYVR+RA+ES+V+GLC+MKRP+EAES V+EMR KGI PS+FEYR
Sbjct: 184 DNSYDSLLELLHNSTSVYVRRRAFESIVSGLCAMKRPEEAESLVKEMRSKGIAPSSFEYR 243

Query: 447 SIVYAYGTLGLFEDMNRSLEQMVNDDIAIDTVCSNMVLSSYGAHNKLANMVMWLQRMKTS 506
           S++YAYGTLGLFEDM RSLEQM  DDI +DTVCSNMVLSSYGAHNKLA+M++WLQ MKTS
Sbjct: 244 SVIYAYGTLGLFEDMKRSLEQMEKDDIDLDTVCSNMVLSSYGAHNKLADMLLWLQTMKTS 303

Query: 507 ALPFSVRTYNSVLSSCPKTMSMLRD-TGSDLPVSIKDLIAALEGDEALLVGELVGSSVLT 566
           +LPFSVRTYNSVL+SCPK MSML+D + +DLP+SI+DLI AL G+EALLV ELVGSSVL 
Sbjct: 304 SLPFSVRTYNSVLNSCPKLMSMLQDMSAADLPLSIEDLITALYGNEALLVEELVGSSVLK 363

Query: 567 EVMDWDAMELKLDLHGAHIGAAYVIMLQWMKEMRLNFEDENSVIPAQVTVICGSGNHSIV 626
           EVM WD+MELKLD HGAH+GAAYVIMLQWMKEM+LNFEDENSVIPA+V VICGSGNHSIV
Sbjct: 364 EVMVWDSMELKLDFHGAHVGAAYVIMLQWMKEMKLNFEDENSVIPAEVIVICGSGNHSIV 423

Query: 627 RGESPVKALIKKITVWTGSPLRIDRKNTGCFVSKGKAVKNWLCLR 671
           RGESP+KALIK+I V TGSPLRIDRKNTGCFVSKGKAVKNWLCLR
Sbjct: 424 RGESPLKALIKEIMVRTGSPLRIDRKNTGCFVSKGKAVKNWLCLR 456

[Close]

BLAST of Lag0009344 vs. TAIR 10
Match: AT2G17033.1 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 471.5 bits (1212), Expect = 1.2e-132
Identity = 240/417 (57.55%), Postives = 304/417 (72.90%), Query Frame = 0


Query: 252 LTKQSHRFLSTLATTAATGDQSATNRLIKKFVASSPKSITLNVLSNIVSPHTAQPGLCSV 311
           L K   RFLS+L++ A  GD SA NR IKKFVA+SPKS+ LNVLS+++S  T+ P L   
Sbjct: 88  LMKHGDRFLSSLSSPALAGDPSAINRHIKKFVAASPKSVALNVLSHLLSDQTSHPHLSFF 147

Query: 312 ALALYCRITEASWFTWNSKLVADLVAYLDKNGLYSESEALIFEAVSKLGFQERKLVSFYC 371
           AL+LY  ITEASWF WN KL+A+L+A L+K   + ESE L+  AVS+L   ER    F C
Sbjct: 148 ALSLYSEITEASWFDWNPKLIAELIALLNKQERFDESETLLSTAVSRLKSNERDFTLFLC 207

Query: 372 QLIESQSKHGSEIGFGNSYARLLELLYNSSSVYVRQRAYESMVTGLCSMKRPQEAESFVE 431
            L+ES SK GS  GF  +  RL E++  SSSVYV+ +AY+SMV+GLC+M +P +AE  +E
Sbjct: 208 NLVESNSKQGSIQGFSEASFRLREIIQRSSSVYVKTQAYKSMVSGLCNMDQPHDAERVIE 267

Query: 432 EMRGKGINPSAFEYRSIVYAYGTLGLFEDMNRSLEQMVNDDIAIDTVCSNMVLSSYGAHN 491
           EMR + I P  FEY+S++Y YG LGLF+DMNR + +M  +   IDTVCSNMVLSSYGAH+
Sbjct: 268 EMRMEKIKPGLFEYKSVLYGYGRLGLFDDMNRVVHRMGTEGHKIDTVCSNMVLSSYGAHD 327

Query: 492 KLANMVMWLQRMKTSALPFSVRTYNSVLSSCPKTMSMLRDTGSDLPVSIKDLIAALEGDE 551
            L  M  WLQ++K   +PFS+RTYNSVL+SCP  +SML+D  S  PVS+ +L   L  DE
Sbjct: 328 ALPQMGSWLQKLKGFNVPFSIRTYNSVLNSCPTIISMLKDLDS-CPVSLSELRTFLNEDE 387

Query: 552 ALLVGELVGSSVLTEVMDWDAMELKLDLHGAHIGAAYVIMLQWMKEMRLNFEDENSVIPA 611
           ALLV EL  SSVL E ++W+A+E KLDLHG H+ ++Y+I+LQWM E RL F +E  VIPA
Sbjct: 388 ALLVHELTQSSVLDEAIEWNAVEGKLDLHGMHLSSSYLILLQWMDETRLRFSEEKCVIPA 447

Query: 612 QVTVICGSGNHSIVRGESPVKALIKKITVWTGSPLRIDRKNTGCFVSKGKAVKNWLC 669
           ++ V+ GSG HS VRGESPVKAL+KKI V TGSP+RIDRKN G F++KGK VK WLC
Sbjct: 448 EIVVVSGSGKHSNVRGESPVKALVKKIMVRTGSPMRIDRKNVGSFIAKGKTVKEWLC 503

[Close]

BLAST of Lag0009344 vs. TAIR 10
Match: AT2G17033.2 (pentatricopeptide (PPR) repeat-containing protein )

HSP 1 Score: 471.5 bits (1212), Expect = 1.2e-132
Identity = 240/417 (57.55%), Postives = 304/417 (72.90%), Query Frame = 0


Query: 252 LTKQSHRFLSTLATTAATGDQSATNRLIKKFVASSPKSITLNVLSNIVSPHTAQPGLCSV 311
           L K   RFLS+L++ A  GD SA NR IKKFVA+SPKS+ LNVLS+++S  T+ P L   
Sbjct: 89  LMKHGDRFLSSLSSPALAGDPSAINRHIKKFVAASPKSVALNVLSHLLSDQTSHPHLSFF 148

Query: 312 ALALYCRITEASWFTWNSKLVADLVAYLDKNGLYSESEALIFEAVSKLGFQERKLVSFYC 371
           AL+LY  ITEASWF WN KL+A+L+A L+K   + ESE L+  AVS+L   ER    F C
Sbjct: 149 ALSLYSEITEASWFDWNPKLIAELIALLNKQERFDESETLLSTAVSRLKSNERDFTLFLC 208

Query: 372 QLIESQSKHGSEIGFGNSYARLLELLYNSSSVYVRQRAYESMVTGLCSMKRPQEAESFVE 431
            L+ES SK GS  GF  +  RL E++  SSSVYV+ +AY+SMV+GLC+M +P +AE  +E
Sbjct: 209 NLVESNSKQGSIQGFSEASFRLREIIQRSSSVYVKTQAYKSMVSGLCNMDQPHDAERVIE 268

Query: 432 EMRGKGINPSAFEYRSIVYAYGTLGLFEDMNRSLEQMVNDDIAIDTVCSNMVLSSYGAHN 491
           EMR + I P  FEY+S++Y YG LGLF+DMNR + +M  +   IDTVCSNMVLSSYGAH+
Sbjct: 269 EMRMEKIKPGLFEYKSVLYGYGRLGLFDDMNRVVHRMGTEGHKIDTVCSNMVLSSYGAHD 328

Query: 492 KLANMVMWLQRMKTSALPFSVRTYNSVLSSCPKTMSMLRDTGSDLPVSIKDLIAALEGDE 551
            L  M  WLQ++K   +PFS+RTYNSVL+SCP  +SML+D  S  PVS+ +L   L  DE
Sbjct: 329 ALPQMGSWLQKLKGFNVPFSIRTYNSVLNSCPTIISMLKDLDS-CPVSLSELRTFLNEDE 388

Query: 552 ALLVGELVGSSVLTEVMDWDAMELKLDLHGAHIGAAYVIMLQWMKEMRLNFEDENSVIPA 611
           ALLV EL  SSVL E ++W+A+E KLDLHG H+ ++Y+I+LQWM E RL F +E  VIPA
Sbjct: 389 ALLVHELTQSSVLDEAIEWNAVEGKLDLHGMHLSSSYLILLQWMDETRLRFSEEKCVIPA 448

Query: 612 QVTVICGSGNHSIVRGESPVKALIKKITVWTGSPLRIDRKNTGCFVSKGKAVKNWLC 669
           ++ V+ GSG HS VRGESPVKAL+KKI V TGSP+RIDRKN G F++KGK VK WLC
Sbjct: 449 EIVVVSGSGKHSNVRGESPVKALVKKIMVRTGSPMRIDRKNVGSFIAKGKTVKEWLC 504

[Close]

BLAST of Lag0009344 vs. TAIR 10
Match: AT5G42210.1 (Major facilitator superfamily protein )

HSP 1 Score: 146.0 bits (367), Expect = 1.1e-34
Identity = 88/190 (46.32%), Postives = 121/190 (63.68%), Query Frame = 0


Query: 14  RTATICLFNNIALGWTQASLLYYLKARFHSNKDQFASLLIIIGGLGAISQAIVASSLSAM 73
           + A +  F+++A     AS +YYLKA+FH NKDQFA L+II+G  G+ISQ +    L   
Sbjct: 91  QVAMVSFFSSLAEAGLHASSMYYLKAKFHFNKDQFADLMIIVGASGSISQLLFMPVLVPA 150

Query: 74  IGDKNLLSVSLFATFIQFLILSISWSFWVVYASYSALFLLSWCVIPAT--SSIASKQVEA 133
           + ++ LLS+ LF       +L ++WS WV Y   +A+F L + + P++   SI SKQV +
Sbjct: 151 LKEERLLSIGLFFGCAHMFLLCVAWSSWVPY--MAAIFAL-FSIFPSSCMRSIVSKQVAS 210

Query: 134 HEQGKAQGCIFGIQSFAYAISPLAFNPVAALFLSENAPFDFPGFIILCLGFFPLVAFVLS 193
           +EQGKAQG I  I S A  ISPLAF+P+   FLSE APF+FPGF I+C GF   +AF+ S
Sbjct: 211 YEQGKAQGIISSICSLANVISPLAFSPLTDWFLSERAPFNFPGFSIMCAGFAMTIAFIQS 270

Query: 194 LRIKVNPSIS 202
           L I+    IS
Sbjct: 271 LMIRAATPIS 277

[Close]

BLAST of Lag0009344 vs. TAIR 10
Match: AT2G16970.1 (Major facilitator superfamily protein )

HSP 1 Score: 142.5 bits (358), Expect = 1.2e-33
Identity = 81/193 (41.97%), Postives = 121/193 (62.69%), Query Frame = 0


Query: 9   SSTFSRTATICLFNNIALGWTQASLLYYLKARFHSNKDQFASLLIIIGGLGAISQAIVAS 68
           S+   +T  +  F   A    Q++ LY+LKARF  NK+ FA L++++  +G+ISQ  +  
Sbjct: 242 STILVQTLVVTFFATFAQSGMQSAFLYFLKARFGFNKNDFAELILLVTIIGSISQLFILP 301

Query: 69  SLSAMIGDKNLLSVSLFATFIQFLILSISWSFWVVYASYSALFLLSWCVIPATSSIASKQ 128
            L + IG++ +LS  L    +    LS+SWS WV YA+ + L  ++  V+P+   IAS+Q
Sbjct: 302 KLVSAIGERRVLSTGLLMDSVNAACLSVSWSAWVPYAT-TVLVPVTMFVMPSVCGIASRQ 361

Query: 129 VEAHEQGKAQGCIFGIQSFAYAISPLAFNPVAALFLSENAPFDFPGFIILCLGFFPLVAF 188
           V   EQGK QGCI G++SF+  ++P  ++P+ ALFLSE APF FPGF +LC+ F  ++ F
Sbjct: 362 VGPGEQGKVQGCISGVKSFSGVVAPFIYSPLTALFLSEKAPFYFPGFSLLCVTFSLMIGF 421

Query: 189 VLSLRIKVNPSIS 202
            LSL I+  PS S
Sbjct: 422 FLSLLIRDVPSPS 433

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BLAST of Lag0009344 vs. TAIR 10
Match: AT2G16990.1 (Major facilitator superfamily protein )

HSP 1 Score: 142.1 bits (357), Expect = 1.6e-33
Identity = 85/195 (43.59%), Postives = 120/195 (61.54%), Query Frame = 0


Query: 9   SSTFSRTATICLFNNIALGWTQASLLYYLKARFHSNKDQFASLLIIIGGLGAISQAIVAS 68
           S+ F +   +  F++ +    +++ LY+LKARF  +K QFA LL++I  +G+ISQ  V  
Sbjct: 252 STIFFQALVVTFFSSFSDSGMESAFLYFLKARFGFDKKQFADLLLLITIVGSISQLFVLP 311

Query: 69  SLSAMIGDKNLLSVSLFATFIQFLILSISWSFWVVYASY----SALFLLSWCVIPATSSI 128
             ++ IG+  LLS  LF  FI   I+SISW+ WV Y +      ALF     V+P+   I
Sbjct: 312 RFASAIGECKLLSTGLFMEFINMAIVSISWAPWVPYLTTVFVPGALF-----VMPSVCGI 371

Query: 129 ASKQVEAHEQGKAQGCIFGIQSFAYAISPLAFNPVAALFLSENAPFDFPGFIILCLGFFP 188
           AS+QV   EQGK QGCI G++SF   ++P  F+P+ ALFLS+NAPF FPGF +LC+    
Sbjct: 372 ASRQVGPGEQGKVQGCISGVRSFGKVVAPFVFSPLTALFLSKNAPFYFPGFSLLCISLSS 431

Query: 189 LVAFVLSLRIKVNPS 200
           L+ F  SL IK  P+
Sbjct: 432 LIGFFQSLLIKDVPT 441

The following BLAST results are available for this feature:

BLAST of Lag0009344 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023512520.1	3.2e-209	81.05	pentatricopeptide repeat-containing protein At2g17033 isoform X1 [Cucurbita pepo...	[more]
KAG7010834.1	3.5e-208	80.83	Pentatricopeptide repeat-containing protein [Cucurbita argyrosperma subsp. argyr...	[more]
XP_022943803.1	7.8e-208	80.83	pentatricopeptide repeat-containing protein At2g17033 isoform X1 [Cucurbita mosc...	[more]
XP_038902941.1	5.6e-206	81.08	pentatricopeptide repeat-containing protein At2g17033 [Benincasa hispida]	[more]
XP_022985638.1	1.1e-204	79.96	pentatricopeptide repeat-containing protein At2g17033 isoform X1 [Cucurbita maxi...	[more]

BLAST of Lag0009344 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8GWA9	1.6e-131	57.55	Pentatricopeptide repeat-containing protein At2g17033 OS=Arabidopsis thaliana OX...	[more]
Q9SCP4	3.0e-08	23.90	Pentatricopeptide repeat-containing protein At3g53170 OS=Arabidopsis thaliana OX...	[more]
Q9FKC3	1.1e-07	22.35	Pentatricopeptide repeat-containing protein At5g48730, chloroplastic OS=Arabidop...	[more]
Q96MC6	8.9e-05	27.07	Hippocampus abundant transcript 1 protein OS=Homo sapiens OX=9606 GN=MFSD14A PE=...	[more]
P70187	8.9e-05	27.07	Hippocampus abundant transcript 1 protein OS=Mus musculus OX=10090 GN=Mfsd14a PE...	[more]

BLAST of Lag0009344 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FXE0	3.8e-208	80.83	pentatricopeptide repeat-containing protein At2g17033 isoform X1 OS=Cucurbita mo...	[more]
A0A6J1JE75	5.1e-205	79.96	pentatricopeptide repeat-containing protein At2g17033 isoform X1 OS=Cucurbita ma...	[more]
Q5DMV7	1.5e-201	79.57	Pentatricopeptide (PPR) repeat protein-like OS=Cucumis melo OX=3656 GN=PPR PE=3 ...	[more]
M4R4K5	2.0e-201	79.78	Pentatricopeptide (PPR) repeat protein-like OS=Cucumis melo OX=3656 GN=PPR PE=3 ...	[more]
A0A6J1CF11	1.7e-200	78.06	pentatricopeptide repeat-containing protein At2g17033 OS=Momordica charantia OX=...	[more]

BLAST of Lag0009344 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G17033.1	1.2e-132	57.55	pentatricopeptide (PPR) repeat-containing protein	[more]
AT2G17033.2	1.2e-132	57.55	pentatricopeptide (PPR) repeat-containing protein	[more]
AT5G42210.1	1.1e-34	46.32	Major facilitator superfamily protein	[more]
AT2G16970.1	1.2e-33	41.97	Major facilitator superfamily protein	[more]
AT2G16990.1	1.6e-33	43.59	Major facilitator superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002625	Smr domain	SMART	SM00463	SMR_2	coord: 574..661 e-value: 1.5E-15 score: 67.7
IPR002625	Smr domain	PROSITE	PS50828	SMR	coord: 577..638 score: 11.596375
None	No IPR available	GENE3D	3.30.1370.110		coord: 576..658 e-value: 8.3E-7 score: 31.2
None	No IPR available	PANTHER	PTHR47932	ATPASE EXPRESSION PROTEIN 3	coord: 249..668
None	No IPR available	PANTHER	PTHR47932:SF53	OS02G0120000 PROTEIN	coord: 249..668
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 409..441 e-value: 9.3E-6 score: 23.5
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 409..438 e-value: 2.3E-4 score: 21.2
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 406..440 score: 10.785976
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 390..532 e-value: 2.8E-18 score: 67.9
IPR036259	MFS transporter superfamily	GENE3D	1.20.1250.20	MFS general substrate transporter like domains	coord: 4..195 e-value: 1.6E-15 score: 58.7
IPR036259	MFS transporter superfamily	SUPERFAMILY	103473	MFS general substrate transporter	coord: 12..195
IPR036063	Smr domain superfamily	SUPERFAMILY	160443	SMR domain-like	coord: 575..657

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0009344.1	Lag0009344.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding