Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAAGGAACATGGAAATTACCAGGCTAGCGATCGGGCTCGTGGTCCTCTTCCTCGCCGCCATTTCTGCGCGTTCCGAGTACTACAAAACTGCCCCGAGGGTTCAGTTAGAGGAGAAGGTAACCCATCTTCACTTCTTCCTTTTCGACATCCTGAGCGGCAAAAAACCCAGCGCCGTCGAAGTGGCGCACCCAAACGTAACCATCGGCGACCAGTCGGCGACTCCATTCGGCAGCGTCTACGCCGTCGACGACCCGCTCCGGGAGGGACCCGAGCCGAATTCGAAAGTGATCGGAAACGCGCGAGGGCTGTACGTATCGGCTAGCGCAGGCTCGGATTTGTGCTTGGTGATGTACATCGATTACGGTTTCACCAGCGGCGAGTATAACGGCAGCTCCATCAGCGTGTTTTCGAGGAATCCGGTGACGGAGCCCCGACGGGAGGTGGCGGTTGTCGGCGGGAGAGGAAAGTTTAGAATGGCTCGAGGGTTTGCGAAGCTTAAGACCCATTACTTGAACGTCACTAATGGCGATGCCATTATCGAGTATAACGTTACTGTGTTTCATTACTGA
mRNA sequence
ATGAAAAGGAACATGGAAATTACCAGGCTAGCGATCGGGCTCGTGGTCCTCTTCCTCGCCGCCATTTCTGCGCGTTCCGAGTACTACAAAACTGCCCCGAGGGTTCAGTTAGAGGAGAAGGTAACCCATCTTCACTTCTTCCTTTTCGACATCCTGAGCGGCAAAAAACCCAGCGCCGTCGAAGTGGCGCACCCAAACGTAACCATCGGCGACCAGTCGGCGACTCCATTCGGCAGCGTCTACGCCGTCGACGACCCGCTCCGGGAGGGACCCGAGCCGAATTCGAAAGTGATCGGAAACGCGCGAGGGCTGTACGTATCGGCTAGCGCAGGCTCGGATTTGTGCTTGGTGATGTACATCGATTACGGTTTCACCAGCGGCGAGTATAACGGCAGCTCCATCAGCGTGTTTTCGAGGAATCCGGTGACGGAGCCCCGACGGGAGGTGGCGGTTGTCGGCGGGAGAGGAAAGTTTAGAATGGCTCGAGGGTTTGCGAAGCTTAAGACCCATTACTTGAACGTCACTAATGGCGATGCCATTATCGAGTATAACGTTACTGTGTTTCATTACTGA
Coding sequence (CDS)
ATGAAAAGGAACATGGAAATTACCAGGCTAGCGATCGGGCTCGTGGTCCTCTTCCTCGCCGCCATTTCTGCGCGTTCCGAGTACTACAAAACTGCCCCGAGGGTTCAGTTAGAGGAGAAGGTAACCCATCTTCACTTCTTCCTTTTCGACATCCTGAGCGGCAAAAAACCCAGCGCCGTCGAAGTGGCGCACCCAAACGTAACCATCGGCGACCAGTCGGCGACTCCATTCGGCAGCGTCTACGCCGTCGACGACCCGCTCCGGGAGGGACCCGAGCCGAATTCGAAAGTGATCGGAAACGCGCGAGGGCTGTACGTATCGGCTAGCGCAGGCTCGGATTTGTGCTTGGTGATGTACATCGATTACGGTTTCACCAGCGGCGAGTATAACGGCAGCTCCATCAGCGTGTTTTCGAGGAATCCGGTGACGGAGCCCCGACGGGAGGTGGCGGTTGTCGGCGGGAGAGGAAAGTTTAGAATGGCTCGAGGGTTTGCGAAGCTTAAGACCCATTACTTGAACGTCACTAATGGCGATGCCATTATCGAGTATAACGTTACTGTGTTTCATTACTGA
Protein sequence
MKRNMEITRLAIGLVVLFLAAISARSEYYKTAPRVQLEEKVTHLHFFLFDILSGKKPSAVEVAHPNVTIGDQSATPFGSVYAVDDPLREGPEPNSKVIGNARGLYVSASAGSDLCLVMYIDYGFTSGEYNGSSISVFSRNPVTEPRREVAVVGGRGKFRMARGFAKLKTHYLNVTNGDAIIEYNVTVFHY
Homology
BLAST of Lag0009285 vs. NCBI nr
Match:
XP_038900914.1 (dirigent protein 4-like [Benincasa hispida])
HSP 1 Score: 338.6 bits (867), Expect = 3.5e-89
Identity = 169/191 (88.48%), Postives = 180/191 (94.24%), Query Frame = 0
Query: 1 MKRNMEITRLAIGLVVLFLAAISARSEYY-KTAPRVQLEEKVTHLHFFLFDILSGKKPSA 60
MK+NMEITRL GL+VLFLAAISARSEYY KT PRVQL+EKVT+LHFFLFDILSGKKPSA
Sbjct: 1 MKKNMEITRLQTGLLVLFLAAISARSEYYSKTTPRVQLKEKVTNLHFFLFDILSGKKPSA 60
Query: 61 VEVAHPNVTIGDQSATPFGSVYAVDDPLREGPEPNSKVIGNARGLYVSASAGSDLCLVMY 120
VEVAH N+TIGDQSATPFGSVYA+DDPLREGP PNSKVIGNARGLYVSAS +DLCLVMY
Sbjct: 61 VEVAHANITIGDQSATPFGSVYAIDDPLREGPHPNSKVIGNARGLYVSASQDADLCLVMY 120
Query: 121 IDYGFTSGEYNGSSISVFSRNPVTEPRREVAVVGGRGKFRMARGFAKLKTHYLNVTNGDA 180
IDYGFT+G Y GSSISVFSRNPVTE +REVAVVGGRG+F+MARGFAKLKTHYLNVTNGDA
Sbjct: 121 IDYGFTTGRYKGSSISVFSRNPVTERQREVAVVGGRGQFKMARGFAKLKTHYLNVTNGDA 180
Query: 181 IIEYNVTVFHY 191
IIEYNVTVFHY
Sbjct: 181 IIEYNVTVFHY 191
BLAST of Lag0009285 vs. NCBI nr
Match:
KAE8651892.1 (hypothetical protein Csa_006820 [Cucumis sativus])
HSP 1 Score: 337.4 bits (864), Expect = 7.9e-89
Identity = 167/191 (87.43%), Postives = 182/191 (95.29%), Query Frame = 0
Query: 1 MKRNMEITRLAIGLVVLFLAAISARSEYY-KTAPRVQLEEKVTHLHFFLFDILSGKKPSA 60
M RNMEIT+LA+G++VLFL+AISARSEYY KT PRVQL+EKVT+LHFFLFDILSGKKPSA
Sbjct: 494 MTRNMEITKLAMGVLVLFLSAISARSEYYSKTVPRVQLKEKVTNLHFFLFDILSGKKPSA 553
Query: 61 VEVAHPNVTIGDQSATPFGSVYAVDDPLREGPEPNSKVIGNARGLYVSASAGSDLCLVMY 120
VEVAH N+TIG+QSATPFGSVYAVDDPLREGP+P SKVIGNARGLYVSAS G+DLCL MY
Sbjct: 554 VEVAHANITIGEQSATPFGSVYAVDDPLREGPDPESKVIGNARGLYVSASQGADLCLAMY 613
Query: 121 IDYGFTSGEYNGSSISVFSRNPVTEPRREVAVVGGRGKFRMARGFAKLKTHYLNVTNGDA 180
IDYGFT+G +NGSSISVFSRNPVTE RREVAVVGGRGKF+MARGFAKLKTHYLNV+NGDA
Sbjct: 614 IDYGFTTGPFNGSSISVFSRNPVTEQRREVAVVGGRGKFKMARGFAKLKTHYLNVSNGDA 673
Query: 181 IIEYNVTVFHY 191
IIEYNVTVFHY
Sbjct: 674 IIEYNVTVFHY 684
BLAST of Lag0009285 vs. NCBI nr
Match:
XP_004147025.1 (dirigent protein 4 [Cucumis sativus])
HSP 1 Score: 337.4 bits (864), Expect = 7.9e-89
Identity = 167/191 (87.43%), Postives = 182/191 (95.29%), Query Frame = 0
Query: 1 MKRNMEITRLAIGLVVLFLAAISARSEYY-KTAPRVQLEEKVTHLHFFLFDILSGKKPSA 60
M RNMEIT+LA+G++VLFL+AISARSEYY KT PRVQL+EKVT+LHFFLFDILSGKKPSA
Sbjct: 1 MTRNMEITKLAMGVLVLFLSAISARSEYYSKTVPRVQLKEKVTNLHFFLFDILSGKKPSA 60
Query: 61 VEVAHPNVTIGDQSATPFGSVYAVDDPLREGPEPNSKVIGNARGLYVSASAGSDLCLVMY 120
VEVAH N+TIG+QSATPFGSVYAVDDPLREGP+P SKVIGNARGLYVSAS G+DLCL MY
Sbjct: 61 VEVAHANITIGEQSATPFGSVYAVDDPLREGPDPESKVIGNARGLYVSASQGADLCLAMY 120
Query: 121 IDYGFTSGEYNGSSISVFSRNPVTEPRREVAVVGGRGKFRMARGFAKLKTHYLNVTNGDA 180
IDYGFT+G +NGSSISVFSRNPVTE RREVAVVGGRGKF+MARGFAKLKTHYLNV+NGDA
Sbjct: 121 IDYGFTTGPFNGSSISVFSRNPVTEQRREVAVVGGRGKFKMARGFAKLKTHYLNVSNGDA 180
Query: 181 IIEYNVTVFHY 191
IIEYNVTVFHY
Sbjct: 181 IIEYNVTVFHY 191
BLAST of Lag0009285 vs. NCBI nr
Match:
ADN34006.1 (disease resistance response protein [Cucumis melo subsp. melo] >KAA0045713.1 disease resistance response protein [Cucumis melo var. makuwa] >TYJ99567.1 disease resistance response protein [Cucumis melo var. makuwa])
HSP 1 Score: 334.3 bits (856), Expect = 6.7e-88
Identity = 164/191 (85.86%), Postives = 181/191 (94.76%), Query Frame = 0
Query: 1 MKRNMEITRLAIGLVVLFLAAISARSEYY-KTAPRVQLEEKVTHLHFFLFDILSGKKPSA 60
MKRNMEIT++A+G++VL L+A+SARSEYY KT PRVQL+EKVT+LHFFLFDILSGKKPSA
Sbjct: 1 MKRNMEITKIAMGVLVLLLSAVSARSEYYSKTVPRVQLKEKVTNLHFFLFDILSGKKPSA 60
Query: 61 VEVAHPNVTIGDQSATPFGSVYAVDDPLREGPEPNSKVIGNARGLYVSASAGSDLCLVMY 120
VEVA N+TIGDQSATPFGSVYAVDDPLREGP+P SKVIGNARGLYVSAS G+DLCL MY
Sbjct: 61 VEVARSNITIGDQSATPFGSVYAVDDPLREGPDPESKVIGNARGLYVSASQGADLCLAMY 120
Query: 121 IDYGFTSGEYNGSSISVFSRNPVTEPRREVAVVGGRGKFRMARGFAKLKTHYLNVTNGDA 180
IDYGFT+G +NGSS+SVFSRNPVTE RREVA+VGGRGKFRMARGFAKLKTHYLNV+NGDA
Sbjct: 121 IDYGFTTGPFNGSSLSVFSRNPVTERRREVAIVGGRGKFRMARGFAKLKTHYLNVSNGDA 180
Query: 181 IIEYNVTVFHY 191
IIEYNVTVFHY
Sbjct: 181 IIEYNVTVFHY 191
BLAST of Lag0009285 vs. NCBI nr
Match:
XP_022146232.1 (dirigent protein 4 [Momordica charantia])
HSP 1 Score: 327.4 bits (838), Expect = 8.2e-86
Identity = 161/187 (86.10%), Postives = 177/187 (94.65%), Query Frame = 0
Query: 5 MEITRLAIGLVVLFLAAISARSEYY-KTAPRVQLEEKVTHLHFFLFDILSGKKPSAVEVA 64
ME+TRL +GL++LF+AAISARSEY+ +T PRVQL EKVTHLHF+LFDILSG++PSAVEVA
Sbjct: 1 MEMTRLLVGLLILFVAAISARSEYFSETVPRVQLTEKVTHLHFYLFDILSGERPSAVEVA 60
Query: 65 HPNVTIGDQSATPFGSVYAVDDPLREGPEPNSKVIGNARGLYVSASAGSDLCLVMYIDYG 124
H NVTIGDQSATPFGSVYAVDDPL EGP+P+SKVIGNARGLYVSAS G DLCLVMYIDYG
Sbjct: 61 HSNVTIGDQSATPFGSVYAVDDPLLEGPDPSSKVIGNARGLYVSASEGRDLCLVMYIDYG 120
Query: 125 FTSGEYNGSSISVFSRNPVTEPRREVAVVGGRGKFRMARGFAKLKTHYLNVTNGDAIIEY 184
FT+G+Y GSSISVFSRNPVTEPRREVAVVGGRGKFRMARGFAKL+THYLNVTNGDAIIEY
Sbjct: 121 FTAGKYKGSSISVFSRNPVTEPRREVAVVGGRGKFRMARGFAKLRTHYLNVTNGDAIIEY 180
Query: 185 NVTVFHY 191
VTV+HY
Sbjct: 181 KVTVYHY 187
BLAST of Lag0009285 vs. ExPASy Swiss-Prot
Match:
Q9SKQ2 (Dirigent protein 4 OS=Arabidopsis thaliana OX=3702 GN=DIR4 PE=2 SV=1)
HSP 1 Score: 202.6 bits (514), Expect = 4.0e-51
Identity = 106/183 (57.92%), Postives = 136/183 (74.32%), Query Frame = 0
Query: 12 IGLVVLFLAAIS-ARSEYY-KTAPRVQLEEKVTHLHFFLFDILSGKKPSAVEVAHPNVTI 71
+GLVV F I+ A EY+ +T P + VT+LHFF D L+ PSA+ +A P T
Sbjct: 5 LGLVVSFYLCITFALGEYFSETRPITPKQLVVTNLHFFFHDTLTAPNPSAILIAKPTHTR 64
Query: 72 G--DQSATPFGSVYAVDDPLREGPEPNSKVIGNARGLYVSASAGSDLCLVMYIDYGFTSG 131
G D S +PFGS++A+DDPL GP+P S+ IGNARG+YVS S L MY+D+GFTSG
Sbjct: 65 GDNDSSPSPFGSLFALDDPLTVGPDPKSEKIGNARGMYVS-SGKHVPTLTMYVDFGFTSG 124
Query: 132 EYNGSSISVFSRNPVTEPRREVAVVGGRGKFRMARGFAKLKTHYLNVTNGDAIIEYNVTV 191
++NGSSI+VFSRN +TE REVAVVGGRG+FRMARG A+L T+Y+N+TNGDAI+EYNVT+
Sbjct: 125 KFNGSSIAVFSRNTITEKEREVAVVGGRGRFRMARGVAQLNTYYVNLTNGDAIVEYNVTL 184
BLAST of Lag0009285 vs. ExPASy Swiss-Prot
Match:
F4JUF8 (Dirigent protein 15 OS=Arabidopsis thaliana OX=3702 GN=DIR15 PE=3 SV=1)
HSP 1 Score: 187.2 bits (474), Expect = 1.7e-46
Identity = 95/190 (50.00%), Postives = 129/190 (67.89%), Query Frame = 0
Query: 5 MEITRLAIGLVVLFLAAISARSEYY-KTAPRVQLEEKVTHLHFFLFDILSGKKPSAVEVA 64
M+ T + + L +A ++ YY T P EEKVT + F+L D LSG+ P+AV +A
Sbjct: 1 MKSTLIIFFTLCLSMAVMARHESYYGNTKPAKLNEEKVTRVRFYLHDTLSGQNPTAVRIA 60
Query: 65 HPNVTIGDQSATPFGSVYAVDDPLREGPEPNSKVIGNARGLYVSASAG-SDLCLVMYIDY 124
H N+T G S FGS++ +DDPL GPE +SK IGN +G+YVS S +VMY D
Sbjct: 61 HANLTGGSASPVGFGSLFVIDDPLTVGPEKHSKEIGNGQGMYVSGCKDLSKFTIVMYADL 120
Query: 125 GFTSGEYNGSSISVFSRNPVTEP--RREVAVVGGRGKFRMARGFAKLKTHYLNVTNGDAI 184
FT+G++NGSSIS+FSRNPV E RE+A+VGGRGKFRMARGF K+KT+ +++ GDA+
Sbjct: 121 AFTAGKFNGSSISIFSRNPVAEEVGEREIAIVGGRGKFRMARGFVKVKTNKIDMKTGDAV 180
Query: 185 IEYNVTVFHY 191
+ Y+ TV+HY
Sbjct: 181 LRYDATVYHY 190
BLAST of Lag0009285 vs. ExPASy Swiss-Prot
Match:
A0A1V1FH01 (Pterocarpan synthase 1 OS=Glycyrrhiza echinata OX=46348 GN=PTS1 PE=1 SV=1)
HSP 1 Score: 159.8 bits (403), Expect = 3.0e-38
Identity = 84/187 (44.92%), Postives = 124/187 (66.31%), Query Frame = 0
Query: 8 TRLAIGLVVLFLAAISARSEYYKTAPRVQL---EEKVTHLHFFLFDILSGKKPSAVEVAH 67
T I L + FL + YY++ L EEK THLHF+ D+++G KPS V VA
Sbjct: 5 TTFFISLTLPFLLLSVVTATYYQSMSPTVLGFQEEKFTHLHFYFHDVVTGPKPSMVIVAE 64
Query: 68 PNVTIGDQSATPFGSVYAVDDPLREGPEPNSKVIGNARGLYVSASAGSDLCLVMYIDYGF 127
PN +++ PFG+V A+DDPL GPE +SK++G A+G+Y S S ++ L+M + F
Sbjct: 65 PNGKA--KNSLPFGTVVAMDDPLTVGPESDSKLVGKAQGIYTSISQ-EEMGLMMVMTMAF 124
Query: 128 TSGEYNGSSISVFSRNPV-TEPRREVAVVGGRGKFRMARGFAKLKTHYLNVTNGDAIIEY 187
+ GE+NGS++S+ +RN + +EP RE+A+VGG G FR ARG+A+ K + ++ T GDAI+EY
Sbjct: 125 SDGEFNGSTLSILARNMIMSEPVREMAIVGGTGAFRFARGYAQAKFYSVDFTKGDAIVEY 184
Query: 188 NVTVFHY 191
++ VFHY
Sbjct: 185 DIFVFHY 188
BLAST of Lag0009285 vs. ExPASy Swiss-Prot
Match:
I1JNN8 (Pterocarpan synthase 1 OS=Glycine max OX=3847 GN=PTS1 PE=2 SV=1)
HSP 1 Score: 154.5 bits (389), Expect = 1.2e-36
Identity = 78/154 (50.65%), Postives = 109/154 (70.78%), Query Frame = 0
Query: 38 EEKVTHLHFFLFDILSGKKPSAVEVAHPNVTIGDQSATPFGSVYAVDDPLREGPEPNSKV 97
EE+ THLHFF D+++G KPS V +A PN D A PFG+V A+DDPL GPE +SK+
Sbjct: 36 EEQFTHLHFFFHDVVTGPKPSMVFIAEPNGKAKD--ALPFGTVVAMDDPLTVGPEQDSKL 95
Query: 98 IGNARGLYVSASAGSDLCLVMYIDYGFTSGEYNGSSISVFSRNPV-TEPRREVAVVGGRG 157
+G A+G+Y S S ++ L+M + FT G++NGS+ISV RN + +EP RE+A+VGG G
Sbjct: 96 VGKAQGIYTSISQ-EEMGLMMVMTMAFTDGDFNGSTISVLGRNMIMSEPVREMAIVGGTG 155
Query: 158 KFRMARGFAKLKTHYLNVTNGDAIIEYNVTVFHY 191
FR ARG+A+ + + ++ T GDAI+EY+V V HY
Sbjct: 156 AFRFARGYAQARFYSVDFTKGDAIVEYDVFVNHY 186
BLAST of Lag0009285 vs. ExPASy Swiss-Prot
Match:
Q9SS03 (Dirigent protein 21 OS=Arabidopsis thaliana OX=3702 GN=DIR21 PE=3 SV=1)
HSP 1 Score: 142.9 bits (359), Expect = 3.7e-33
Identity = 75/179 (41.90%), Postives = 113/179 (63.13%), Query Frame = 0
Query: 15 VVLFLAAISARSEYYKTAPRV----QLEEKVTHLHFFLFDILSGKKPSAVEVAHPNVTIG 74
+ L LAA S+ + T + +K+THLHF+ DI+SG KP++V+VA+ T
Sbjct: 14 LALILAATITESKSFSTTVKAPYPGHKPDKLTHLHFYFHDIVSGDKPTSVQVANGPTT-- 73
Query: 75 DQSATPFGSVYAVDDPLREGPEPNSKVIGNARGLYVSASAGSDLCLVMYIDYGFTSGEYN 134
+ SAT FG V VDD L GPE S+ +G A+G+Y SA + L L+M + FT G+++
Sbjct: 74 NSSATGFGLVAVVDDKLTVGPEITSEEVGRAQGMYASADQ-NKLGLLMAFNLVFTKGKFS 133
Query: 135 GSSISVFSRNPVTEPRREVAVVGGRGKFRMARGFAKLKTHYLNVTNGDAIIEYNVTVFH 190
S+++++ RNPV RE+ ++GG G FR RG+A KT N+T+GDA++EYNV ++H
Sbjct: 134 DSTVAMYGRNPVLSKVREMPIIGGTGAFRFGRGYALAKTLVFNITSGDAVVEYNVYIWH 189
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9SKQ2 | 4.0e-51 | 57.92 | Dirigent protein 4 OS=Arabidopsis thaliana OX=3702 GN=DIR4 PE=2 SV=1 | [more] |
F4JUF8 | 1.7e-46 | 50.00 | Dirigent protein 15 OS=Arabidopsis thaliana OX=3702 GN=DIR15 PE=3 SV=1 | [more] |
A0A1V1FH01 | 3.0e-38 | 44.92 | Pterocarpan synthase 1 OS=Glycyrrhiza echinata OX=46348 GN=PTS1 PE=1 SV=1 | [more] |
I1JNN8 | 1.2e-36 | 50.65 | Pterocarpan synthase 1 OS=Glycine max OX=3847 GN=PTS1 PE=2 SV=1 | [more] |
Q9SS03 | 3.7e-33 | 41.90 | Dirigent protein 21 OS=Arabidopsis thaliana OX=3702 GN=DIR21 PE=3 SV=1 | [more] |