Lag0008558 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0008558
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
Descriptionzf-RVT domain-containing protein
Locationchr9: 25342258 .. 25342953 (+)
RNA-Seq ExpressionLag0008558
SyntenyLag0008558
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCTACCCAAGGAGAAATCTCACTGATCTCGAGACTGAAGAATGGATAGCATTAGTATCCAATTTACAACCAATGACTATTAATAGTTGTAGTGACAACTGGGGATGGGATTTAGAGAGGGACAAATCTTTTTCCTCTAAATCCCTTTCTAAGTATTTATCATCCTCCACACCGAGTGCTCATGCTGAACTTTACACCCATATTTGGGCCGGCCGATACCCCAAAAAGGTCAAATTCTTCCTATGGGAAGTTAGCCACTCTTGTATCAACACCCACGACAAGCTCCAAAAAAGATCTCCTTGGATGATTCTATCTCCATCATGCTGTCCTCTTTGTTATAGTGATGCAGAATCTTCGATTCACCTATTCAGCAATTGTCTTTATGCCTCGAAGTTCTGGAGCTTCATGCAATCAACTTTTGGATGGGCCTTTCCTAGACCGGGTGATATTCTATCCCTTCTATCTCTCTTACTTTTGGGACATCCATTTACAAATGACAAGAAGATCCTTTGGTTATGTCATGTTCGTGCTTTCTTTTGGAATCTTTGGTTGGAGCGTAATGGTCGCATTTTCAAGGACAAGGAAAAAGACATCGGCTACTTCATAGATTTCACTTCTCTTTTAGCAGTTTCTTGGAGCAAATTGTCTCCCCCTTTTTGTAATTATGACCTCACTACCCTCGTTTATCAATGA

mRNA sequence

ATGATCTACCCAAGGAGAAATCTCACTGATCTCGAGACTGAAGAATGGATAGCATTAGTATCCAATTTACAACCAATGACTATTAATAGTTGTAGTGACAACTGGGGATGGGATTTAGAGAGGGACAAATCTTTTTCCTCTAAATCCCTTTCTAAGTATTTATCATCCTCCACACCGAGTGCTCATGCTGAACTTTACACCCATATTTGGGCCGGCCGATACCCCAAAAAGGTCAAATTCTTCCTATGGGAAGTTAGCCACTCTTGTATCAACACCCACGACAAGCTCCAAAAAAGATCTCCTTGGATGATTCTATCTCCATCATGCTGTCCTCTTTGTTATAGTGATGCAGAATCTTCGATTCACCTATTCAGCAATTGTCTTTATGCCTCGAAGTTCTGGAGCTTCATGCAATCAACTTTTGGATGGGCCTTTCCTAGACCGGGTGATATTCTATCCCTTCTATCTCTCTTACTTTTGGGACATCCATTTACAAATGACAAGAAGATCCTTTGGTTATGTCATGTTCGTGCTTTCTTTTGGAATCTTTGGTTGGAGCGTAATGGTCGCATTTTCAAGGACAAGGAAAAAGACATCGGCTACTTCATAGATTTCACTTCTCTTTTAGCAGTTTCTTGGAGCAAATTGTCTCCCCCTTTTTGTAATTATGACCTCACTACCCTCGTTTATCAATGA

Coding sequence (CDS)

ATGATCTACCCAAGGAGAAATCTCACTGATCTCGAGACTGAAGAATGGATAGCATTAGTATCCAATTTACAACCAATGACTATTAATAGTTGTAGTGACAACTGGGGATGGGATTTAGAGAGGGACAAATCTTTTTCCTCTAAATCCCTTTCTAAGTATTTATCATCCTCCACACCGAGTGCTCATGCTGAACTTTACACCCATATTTGGGCCGGCCGATACCCCAAAAAGGTCAAATTCTTCCTATGGGAAGTTAGCCACTCTTGTATCAACACCCACGACAAGCTCCAAAAAAGATCTCCTTGGATGATTCTATCTCCATCATGCTGTCCTCTTTGTTATAGTGATGCAGAATCTTCGATTCACCTATTCAGCAATTGTCTTTATGCCTCGAAGTTCTGGAGCTTCATGCAATCAACTTTTGGATGGGCCTTTCCTAGACCGGGTGATATTCTATCCCTTCTATCTCTCTTACTTTTGGGACATCCATTTACAAATGACAAGAAGATCCTTTGGTTATGTCATGTTCGTGCTTTCTTTTGGAATCTTTGGTTGGAGCGTAATGGTCGCATTTTCAAGGACAAGGAAAAAGACATCGGCTACTTCATAGATTTCACTTCTCTTTTAGCAGTTTCTTGGAGCAAATTGTCTCCCCCTTTTTGTAATTATGACCTCACTACCCTCGTTTATCAATGA

Protein sequence

MIYPRRNLTDLETEEWIALVSNLQPMTINSCSDNWGWDLERDKSFSSKSLSKYLSSSTPSAHAELYTHIWAGRYPKKVKFFLWEVSHSCINTHDKLQKRSPWMILSPSCCPLCYSDAESSIHLFSNCLYASKFWSFMQSTFGWAFPRPGDILSLLSLLLLGHPFTNDKKILWLCHVRAFFWNLWLERNGRIFKDKEKDIGYFIDFTSLLAVSWSKLSPPFCNYDLTTLVYQ
Homology
BLAST of Lag0008558 vs. NCBI nr
Match: XP_028960603.1 (uncharacterized protein LOC114825746 [Malus domestica])

HSP 1 Score: 133.7 bits (335), Expect = 2.1e-27
Identity = 77/231 (33.33%), Postives = 120/231 (51.95%), Query Frame = 0

Query: 5   RRNLTDLETEEWIALVSNLQPMTIN-SCSDNWGWDLERDKSFSSKSLSKYLSSSTPSAHA 64
           RRNL + E EE   L+  ++ + ++ S +DN  W +E    F+ KS   +LS++    + 
Sbjct: 33  RRNLNEAEIEEAARLLQKVEEVRLSQSRTDNRRWKMEASGLFTCKSYCSFLSNNGMMQYF 92

Query: 65  ELYTHIWAGRYPKKVKFFLWEVSHSCINTHDKLQKRSPWMILSPSCCPLCYSDAESSIHL 124
           + ++ IW  + P KVK  +W  +   +NT D++Q+RSP++ LSP  C LC +  ES  H+
Sbjct: 93  QPHSQIWKSKVPPKVKILVWLAAKGKLNTCDQIQRRSPFICLSPQWCSLCKAKEESVNHI 152

Query: 125 FSNCLYASKFW--SFMQSTFGWAFPRPGDILSLLSLLLLGHPFTNDKKILWLCHVRAFFW 184
           F +C Y  + W   F +    W  P+      LLS            K LW C V A FW
Sbjct: 153 FLHCSYTIQLWWKLFQEVRASWVIPK--GCFELLSTKFQALGSGRKAKALWGCLVSAVFW 212

Query: 185 NLWLERNGRIFKDKEKDIGYFIDF--TSLLAVSWSKLSPPFCNYDLTTLVY 231
           N+WLERN RIF+D    +G  + +      A  W+ +S  F NY ++ L++
Sbjct: 213 NIWLERNKRIFED-YTGVGVEVLWGRVKYWAALWASVSNVFNNYSISQLLW 260

BLAST of Lag0008558 vs. NCBI nr
Match: TQD97296.1 (hypothetical protein C1H46_017137 [Malus baccata])

HSP 1 Score: 132.9 bits (333), Expect = 3.6e-27
Identity = 79/231 (34.20%), Postives = 119/231 (51.52%), Query Frame = 0

Query: 5   RRNLTDLETEEWIALVSNLQPMTIN-SCSDNWGWDLERDKSFSSKSLSKYLSSSTPSAHA 64
           RRNL + E EE   L+  ++ + ++ S +DN  W LE    F+ KS   +LS++    + 
Sbjct: 24  RRNLNEAEIEEVARLLQKVEEVCLSQSRTDNRRWKLEASGLFTCKSYRSFLSNNGIMQYF 83

Query: 65  ELYTHIWAGRYPKKVKFFLWEVSHSCINTHDKLQKRSPWMILSPSCCPLCYSDAESSIHL 124
             Y+ IW  + P KVK  +W V+   +NT D++Q+RS ++ LSP  C LC ++ E   H+
Sbjct: 84  PPYSQIWKSKVPPKVKILVWLVAKGKLNTCDQIQRRSHFICLSPHWCSLCKANEECVNHI 143

Query: 125 FSNCLYASKFW--SFMQSTFGWAFPRPGDILSLLSLLLLGHPFTNDKKILWLCHVRAFFW 184
           F +C Y  + W   F +    W  P+      LLS            K LW C V A FW
Sbjct: 144 FLHCSYTIQLWWKLFGEVRASWVIPK--GCFELLSTKFQALGIGRKAKALWGCLVSAVFW 203

Query: 185 NLWLERNGRIFKDKEKDIGYFIDF--TSLLAVSWSKLSPPFCNYDLTTLVY 231
           N+WLERN RIF+D    +G  + +      A  W+ +S  F NY L+ L++
Sbjct: 204 NIWLERNKRIFED-YTGVGVEVLWGRVKYWAALWASVSNDFSNYSLSQLLW 251

BLAST of Lag0008558 vs. NCBI nr
Match: TQD85214.1 (hypothetical protein C1H46_029232 [Malus baccata])

HSP 1 Score: 132.5 bits (332), Expect = 4.7e-27
Identity = 74/193 (38.34%), Postives = 104/193 (53.89%), Query Frame = 0

Query: 5   RRNLTDLETEEWIALVSNLQPMTIN-SCSDNWGWDLERDKSFSSKSLSKYLSSSTPSAHA 64
           RRNL ++E EE  +L+  ++ + ++ S  DN  W+LE    F+ KS    LS++    + 
Sbjct: 162 RRNLNEMEIEEAASLLQKVEVIRLSPSKMDNRRWNLEASGLFTCKSYRSLLSNNGIVHYY 221

Query: 65  ELYTHIWAGRYPKKVKFFLWEVSHSCINTHDKLQKRSPWMILSPSCCPLCYSDAESSIHL 124
             Y+ IW  + P KVK  +W V+   +NT DK+QKR+P M LSP  C LC +  ES  H+
Sbjct: 222 PPYSQIWKSKAPPKVKILVWFVATGSLNTCDKIQKRNPLMCLSPHWCSLCKAKEESVNHI 281

Query: 125 FSNCLYASKFW--SFMQSTFGWAFPRPGDILSLLSLLLLGHPFTNDKKILWLCHVRAFFW 184
           F +C Y+ + W   F +    W  P+      LLS            K LW C V A FW
Sbjct: 282 FLHCSYSIQLWWKLFQEVKVSWVIPK--GCFELLSTNFKALGKGKKSKALWGCLVSAIFW 341

Query: 185 NLWLERNGRIFKD 195
           N+WLERN RIF+D
Sbjct: 342 NIWLERNKRIFED 352

BLAST of Lag0008558 vs. NCBI nr
Match: TQD93576.1 (hypothetical protein C1H46_020784 [Malus baccata])

HSP 1 Score: 131.0 bits (328), Expect = 1.4e-26
Identity = 71/193 (36.79%), Postives = 104/193 (53.89%), Query Frame = 0

Query: 5   RRNLTDLETEEWIALVSNLQPMTIN-SCSDNWGWDLERDKSFSSKSLSKYLSSSTPSAHA 64
           RRNL + E EE   L+  ++ + ++ S +DN  W LE  + F+ KS   +LS++    + 
Sbjct: 278 RRNLNEAEIEEAARLLQKVEEVRLSQSRTDNRRWKLEASRLFTCKSYRSFLSNNGIMQYF 337

Query: 65  ELYTHIWAGRYPKKVKFFLWEVSHSCINTHDKLQKRSPWMILSPSCCPLCYSDAESSIHL 124
             Y+ IW  + P KVK  +W V+   +NT D++Q+RS ++ LSP  C LC +  ES  H+
Sbjct: 338 PPYSQIWKSKVPPKVKILVWLVAKGKLNTCDQIQRRSHFICLSPHWCSLCKAKEESVNHI 397

Query: 125 FSNCLYASKFW--SFMQSTFGWAFPRPGDILSLLSLLLLGHPFTNDKKILWLCHVRAFFW 184
           F +C Y  + W   F +    W  P+      LLS            K+LW C V A FW
Sbjct: 398 FLHCSYTIQLWWKLFQEVRASWVIPK--GCFELLSTKFQALGIGRKAKVLWGCLVSAVFW 457

Query: 185 NLWLERNGRIFKD 195
           N+WLERN RIF+D
Sbjct: 458 NIWLERNKRIFED 468

BLAST of Lag0008558 vs. NCBI nr
Match: BBN69274.1 (TatD related DNase [Prunus dulcis])

HSP 1 Score: 129.4 bits (324), Expect = 4.0e-26
Identity = 80/227 (35.24%), Postives = 115/227 (50.66%), Query Frame = 0

Query: 5   RRNLTDLETEEWIALVSNLQPMTI-NSCSDNWGWDLERDKSFSSKSLSKYLSSSTPSAHA 64
           RRNL++ E  E + L+  L  + +  S  D   W++E   SFS KS   +L S+T S   
Sbjct: 742 RRNLSEAEIAEVVLLLDILGNVRLFGSRPDRRSWEIEEQGSFSCKSFRSFLISTT-SVVF 801

Query: 65  ELYTHIWAGRYPKKVKFFLWEVSHSCINTHDKLQKRSPWMILSPSCCPLCYSDAESSIHL 124
             Y  IW  + P K++FF+W  ++  INT D +Q+R P M LSPS C  C  +AE+  HL
Sbjct: 802 PPYRSIWKAKTPPKIQFFVWLAANGRINTCDCIQRRQPKMCLSPSWCVFCKENAENIDHL 861

Query: 125 FSNCLYASKFWSFMQSTFGWAFPRPGDILSLLSLLLLGHPFTNDKKILWLCHVRAFFWNL 184
           F +C Y+ K W  M    G  +  P     LLS+ L          IL  C + A FWN+
Sbjct: 862 FIHCSYSLKLWWRMLDALGAEWVIPKGCFELLSINLRISGKGKKAGILRDCLIHAIFWNI 921

Query: 185 WLERNGRIFKDKE-KDIGYFIDFTSLLAVSWSKLSPPFCNYDLTTLV 230
           W+ERN RIF+      +    D     A  W+ +S  F +Y  +T++
Sbjct: 922 WMERNRRIFQGHSGVRVEELWDRIKFWASLWASVSGQFKDYHYSTIM 967

BLAST of Lag0008558 vs. ExPASy TrEMBL
Match: A0A540MEX9 (zf-RVT domain-containing protein OS=Malus baccata OX=106549 GN=C1H46_017137 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 1.7e-27
Identity = 79/231 (34.20%), Postives = 119/231 (51.52%), Query Frame = 0

Query: 5   RRNLTDLETEEWIALVSNLQPMTIN-SCSDNWGWDLERDKSFSSKSLSKYLSSSTPSAHA 64
           RRNL + E EE   L+  ++ + ++ S +DN  W LE    F+ KS   +LS++    + 
Sbjct: 24  RRNLNEAEIEEVARLLQKVEEVCLSQSRTDNRRWKLEASGLFTCKSYRSFLSNNGIMQYF 83

Query: 65  ELYTHIWAGRYPKKVKFFLWEVSHSCINTHDKLQKRSPWMILSPSCCPLCYSDAESSIHL 124
             Y+ IW  + P KVK  +W V+   +NT D++Q+RS ++ LSP  C LC ++ E   H+
Sbjct: 84  PPYSQIWKSKVPPKVKILVWLVAKGKLNTCDQIQRRSHFICLSPHWCSLCKANEECVNHI 143

Query: 125 FSNCLYASKFW--SFMQSTFGWAFPRPGDILSLLSLLLLGHPFTNDKKILWLCHVRAFFW 184
           F +C Y  + W   F +    W  P+      LLS            K LW C V A FW
Sbjct: 144 FLHCSYTIQLWWKLFGEVRASWVIPK--GCFELLSTKFQALGIGRKAKALWGCLVSAVFW 203

Query: 185 NLWLERNGRIFKDKEKDIGYFIDF--TSLLAVSWSKLSPPFCNYDLTTLVY 231
           N+WLERN RIF+D    +G  + +      A  W+ +S  F NY L+ L++
Sbjct: 204 NIWLERNKRIFED-YTGVGVEVLWGRVKYWAALWASVSNDFSNYSLSQLLW 251

BLAST of Lag0008558 vs. ExPASy TrEMBL
Match: A0A540LFH9 (zf-RVT domain-containing protein OS=Malus baccata OX=106549 GN=C1H46_029232 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 2.3e-27
Identity = 74/193 (38.34%), Postives = 104/193 (53.89%), Query Frame = 0

Query: 5   RRNLTDLETEEWIALVSNLQPMTIN-SCSDNWGWDLERDKSFSSKSLSKYLSSSTPSAHA 64
           RRNL ++E EE  +L+  ++ + ++ S  DN  W+LE    F+ KS    LS++    + 
Sbjct: 162 RRNLNEMEIEEAASLLQKVEVIRLSPSKMDNRRWNLEASGLFTCKSYRSLLSNNGIVHYY 221

Query: 65  ELYTHIWAGRYPKKVKFFLWEVSHSCINTHDKLQKRSPWMILSPSCCPLCYSDAESSIHL 124
             Y+ IW  + P KVK  +W V+   +NT DK+QKR+P M LSP  C LC +  ES  H+
Sbjct: 222 PPYSQIWKSKAPPKVKILVWFVATGSLNTCDKIQKRNPLMCLSPHWCSLCKAKEESVNHI 281

Query: 125 FSNCLYASKFW--SFMQSTFGWAFPRPGDILSLLSLLLLGHPFTNDKKILWLCHVRAFFW 184
           F +C Y+ + W   F +    W  P+      LLS            K LW C V A FW
Sbjct: 282 FLHCSYSIQLWWKLFQEVKVSWVIPK--GCFELLSTNFKALGKGKKSKALWGCLVSAIFW 341

Query: 185 NLWLERNGRIFKD 195
           N+WLERN RIF+D
Sbjct: 342 NIWLERNKRIFED 352

BLAST of Lag0008558 vs. ExPASy TrEMBL
Match: A0A540M4H0 (zf-RVT domain-containing protein OS=Malus baccata OX=106549 GN=C1H46_020784 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 6.6e-27
Identity = 71/193 (36.79%), Postives = 104/193 (53.89%), Query Frame = 0

Query: 5   RRNLTDLETEEWIALVSNLQPMTIN-SCSDNWGWDLERDKSFSSKSLSKYLSSSTPSAHA 64
           RRNL + E EE   L+  ++ + ++ S +DN  W LE  + F+ KS   +LS++    + 
Sbjct: 278 RRNLNEAEIEEAARLLQKVEEVRLSQSRTDNRRWKLEASRLFTCKSYRSFLSNNGIMQYF 337

Query: 65  ELYTHIWAGRYPKKVKFFLWEVSHSCINTHDKLQKRSPWMILSPSCCPLCYSDAESSIHL 124
             Y+ IW  + P KVK  +W V+   +NT D++Q+RS ++ LSP  C LC +  ES  H+
Sbjct: 338 PPYSQIWKSKVPPKVKILVWLVAKGKLNTCDQIQRRSHFICLSPHWCSLCKAKEESVNHI 397

Query: 125 FSNCLYASKFW--SFMQSTFGWAFPRPGDILSLLSLLLLGHPFTNDKKILWLCHVRAFFW 184
           F +C Y  + W   F +    W  P+      LLS            K+LW C V A FW
Sbjct: 398 FLHCSYTIQLWWKLFQEVRASWVIPK--GCFELLSTKFQALGIGRKAKVLWGCLVSAVFW 457

Query: 185 NLWLERNGRIFKD 195
           N+WLERN RIF+D
Sbjct: 458 NIWLERNKRIFED 468

BLAST of Lag0008558 vs. ExPASy TrEMBL
Match: A0A5H2XQW2 (TatD related DNase OS=Prunus dulcis OX=3755 GN=Prudu_862S001100 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 1.9e-26
Identity = 80/227 (35.24%), Postives = 115/227 (50.66%), Query Frame = 0

Query: 5   RRNLTDLETEEWIALVSNLQPMTI-NSCSDNWGWDLERDKSFSSKSLSKYLSSSTPSAHA 64
           RRNL++ E  E + L+  L  + +  S  D   W++E   SFS KS   +L S+T S   
Sbjct: 742 RRNLSEAEIAEVVLLLDILGNVRLFGSRPDRRSWEIEEQGSFSCKSFRSFLISTT-SVVF 801

Query: 65  ELYTHIWAGRYPKKVKFFLWEVSHSCINTHDKLQKRSPWMILSPSCCPLCYSDAESSIHL 124
             Y  IW  + P K++FF+W  ++  INT D +Q+R P M LSPS C  C  +AE+  HL
Sbjct: 802 PPYRSIWKAKTPPKIQFFVWLAANGRINTCDCIQRRQPKMCLSPSWCVFCKENAENIDHL 861

Query: 125 FSNCLYASKFWSFMQSTFGWAFPRPGDILSLLSLLLLGHPFTNDKKILWLCHVRAFFWNL 184
           F +C Y+ K W  M    G  +  P     LLS+ L          IL  C + A FWN+
Sbjct: 862 FIHCSYSLKLWWRMLDALGAEWVIPKGCFELLSINLRISGKGKKAGILRDCLIHAIFWNI 921

Query: 185 WLERNGRIFKDKE-KDIGYFIDFTSLLAVSWSKLSPPFCNYDLTTLV 230
           W+ERN RIF+      +    D     A  W+ +S  F +Y  +T++
Sbjct: 922 WMERNRRIFQGHSGVRVEELWDRIKFWASLWASVSGQFKDYHYSTIM 967

BLAST of Lag0008558 vs. ExPASy TrEMBL
Match: M5XV38 (zf-RVT domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_ppa019854mg PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 4.3e-26
Identity = 81/230 (35.22%), Postives = 118/230 (51.30%), Query Frame = 0

Query: 5   RRNLTDLETEEWIALVSNLQPMTI-NSCSDNWGWDLERDKSFSSKSLSKYLSSSTPSAHA 64
           RRNL++ E  E + L+  L  + +  S  D   W++E   SFS KS   +L S+T     
Sbjct: 236 RRNLSEAEIAEVVILLDILGNVRLYGSRPDRRSWEVEEQGSFSCKSFRSFLLSTTRDVFP 295

Query: 65  ELYTHIWAGRYPKKVKFFLWEVSHSCINTHDKLQKRSPWMILSPSCCPLCYSDAESSIHL 124
             ++ IW  + P K++FF+W  ++  INT D +Q+R P M LSPS C LC  +AE+  HL
Sbjct: 296 P-FSSIWKAKTPPKIQFFVWLAANGRINTCDCIQRRQPKMCLSPSWCVLCKENAENIDHL 355

Query: 125 FSNCLYASKFWSFMQSTFGWAFPRPGDILSLLSLLLLGHPFTNDKKILWLCHVRAFFWNL 184
           F +C Y+ + W  M    G  +  P     LLS+ L          IL  C V A FWN+
Sbjct: 356 FIHCSYSLRLWWKMLGALGVEWVIPKGCFELLSINLRISGKGKRAGILRDCLVHAIFWNI 415

Query: 185 WLERNGRIFKDKEKDIGYFI----DFTSLLAVSWSKLSPPFCNYDLTTLV 230
           W+ERN RIF   +  IG  +    D     A  W+ +S  F +Y  +T++
Sbjct: 416 WMERNQRIF---QGHIGVRVEELWDRIKFWASLWASVSGQFKDYHYSTIM 461

BLAST of Lag0008558 vs. TAIR 10
Match: AT1G43730.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 60.8 bits (146), Expect = 1.6e-09
Identity = 59/202 (29.21%), Postives = 82/202 (40.59%), Query Frame = 0

Query: 17  IALVSNLQPMTINSCSDNWGW-DLERDKSFSSK----------SLSKYLSSSTPSAH-AE 76
           I LV  L P T+    D  G  D + D SF  K          S +K   +  P  H   
Sbjct: 91  IDLVGPLGPQTVGLPIDAVGLIDCQHDDSFIWKTDLHAPSNIFSTAKTSLALHPQNHIVP 150

Query: 77  LYTHIWAGRYPKKVKFFLWEVSHSCINTHDKLQKRSPWMILSPSCCPLCYSDAESSIHLF 136
            Y  +W   +  K  F  W V+ + ++T D+L+    W +  P+ C LC S  ES  HLF
Sbjct: 151 WYKAVWFKNHVPKHAFICWVVAWNRLHTRDRLRS---WGLSIPAVCLLCNSHDESRAHLF 210

Query: 137 SNCLYASKFWSFMQSTFGWAFPRPGDILSLLSLLLLGHPFTNDKKILWLCHVRAFFWNLW 196
             C +    W F        FP P  ++  L  LL      N   I+ L   +A+ + +W
Sbjct: 211 FECPFCGAVWRFFTGRAN-LFP-PAQLMYCLIWLLNPSRDKNTTLIIRLA-FQAYVYAIW 270

Query: 197 LERN-------GRIFKDKEKDI 200
            ERN        R+F    KDI
Sbjct: 271 RERNLCLHTGVARVFDSVLKDI 286

BLAST of Lag0008558 vs. TAIR 10
Match: AT3G25270.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 57.0 bits (136), Expect = 2.3e-08
Identity = 39/137 (28.47%), Postives = 58/137 (42.34%), Query Frame = 0

Query: 59  PSAHAELYTHIWAGRYPKKVKFFLWEVSHSCINTHDKLQKRSPWMILSPSCCPLCYSDAE 118
           P   AE+   IW  +   K+K FLW++    + T D L++R    I +   C  C  + E
Sbjct: 8   PPGKAEIKAKIWKLKTAPKIKHFLWKLLSGALATGDNLKRRH---IRNHPQCHRCCQEDE 67

Query: 119 SSIHLFSNCLYASKFWSFMQSTFGWAFPRPGDILSLLSLLLLGHPFTNDKKILWLCHVRA 178
           +S HLF +C YA + W              G  +     LLL     N +  L+   +  
Sbjct: 68  TSQHLFFDCFYAQQVWR-ASGIPHQELRTTGITMETKMELLLSSCLANRQPQLFNLAI-W 127

Query: 179 FFWNLWLERNGRIFKDK 196
             W LW  RN  +F+ K
Sbjct: 128 ILWRLWKSRNQLVFQQK 139

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_028960603.12.1e-2733.33uncharacterized protein LOC114825746 [Malus domestica][more]
TQD97296.13.6e-2734.20hypothetical protein C1H46_017137 [Malus baccata][more]
TQD85214.14.7e-2738.34hypothetical protein C1H46_029232 [Malus baccata][more]
TQD93576.11.4e-2636.79hypothetical protein C1H46_020784 [Malus baccata][more]
BBN69274.14.0e-2635.24TatD related DNase [Prunus dulcis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A540MEX91.7e-2734.20zf-RVT domain-containing protein OS=Malus baccata OX=106549 GN=C1H46_017137 PE=4... [more]
A0A540LFH92.3e-2738.34zf-RVT domain-containing protein OS=Malus baccata OX=106549 GN=C1H46_029232 PE=4... [more]
A0A540M4H06.6e-2736.79zf-RVT domain-containing protein OS=Malus baccata OX=106549 GN=C1H46_020784 PE=4... [more]
A0A5H2XQW21.9e-2635.24TatD related DNase OS=Prunus dulcis OX=3755 GN=Prudu_862S001100 PE=4 SV=1[more]
M5XV384.3e-2635.22zf-RVT domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_ppa019854mg ... [more]
Match NameE-valueIdentityDescription
AT1G43730.11.6e-0929.21RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
AT3G25270.12.3e-0828.47Ribonuclease H-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026960Reverse transcriptase zinc-binding domainPFAMPF13966zf-RVTcoord: 45..134
e-value: 2.2E-15
score: 57.1

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0008558.1Lag0008558.1mRNA