Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCAACGCCAATTCAACCGGTTTTCCTGCCGCCTCCACCGGAACTACAAATTTCAGTAGTCCTCCGCTAAATCAACTGTTGAACCAAATAACCTCTATAAAGCTCGATAGAGGTAACTTTTTGTTATGGAAAAACCTGGCATTACCAATTTTACGCAGCTACAAACTGGAAGGGTATTTGTCTGGTTTGAAGCCCTATCCTCCGAAGTTTATTCAAGCTGCGACCAGCTCCTCTCCCCCATCGTCGACTGGAGAAGGAGCCATTGATGAAGCAACTGCAACAAGGCAGACAACTCCCAATCCAGATTATGAGTCGTGGATTGCCATTGATCAACTTCTATTGGGTTGGCTTTACAACTCTATGTCTCTTGAGGTAGCCACCCAAGTAATGGGATTCGAGAATGCTCAAGATCTGTGGGCAGCGGTTCAAGAGTTGTTCGGTGTTCAATCTCGAGCAGAGGAAGACTACTTACGTCAGGTATTTCAACAGTCAAGAAAAGGTAATTTAAAAATGGCTGACTATCTTCGTGTTATGAAAAATCACGCTGACAACTTAGGGCAAGCTGGGAGTCCAGTTACCACCCGATCTCTTGTGTCAGAAGTTCTTTTAGGGTTAGATGAAGAGTACAACCCTGTTGTGGAGATGATTCAAGGCAGAATAGGTGTGACCTGATCTGAGCTACAAGCTGAACTTCTCGTGTTTGAGAAGAGGCTTGAATTGCAGAACAACTTAAAGAGCTCGTTGACTCTCAGTGCAGCCACCTCAGTGAACATGGCTAGCTCCAAAGATACTGGTACACAGAGGAATCAAAGCTCATCGACCAATGGAAGATCAAACAATTTTGGCCGTGGAAATCTTCGAGGAGGAGGACAACGTGGCTGA
mRNA sequence
ATGGCCAACGCCAATTCAACCGGTTTTCCTGCCGCCTCCACCGGAACTACAAATTTCAGTAGTCCTCCGCTAAATCAACTGTTGAACCAAATAACCTCTATAAAGCTCGATAGAGGTAACTTTTTGTTATGGAAAAACCTGGCATTACCAATTTTACGCAGCTACAAACTGGAAGGGTATTTGTCTGGTTTGAAGCCCTATCCTCCGAAGTTTATTCAAGCTGCGACCAGCTCCTCTCCCCCATCGTCGACTGGAGAAGGAGCCATTGATGAAGCAACTGCAACAAGGCAGACAACTCCCAATCCAGATTATGAGTCGTGGATTGCCATTGATCAACTTCTATTGGGTTGGCTTTACAACTCTATGTCTCTTGAGGTAGCCACCCAAGTAATGGGATTCGAGAATGCTCAAGATCTGTGGGCAGCGGTTCAAGAGTTGTTCGGTGTTCAATCTCGAGCAGAGGAAGACTACTTACGTCAGGTATTTCAACAGTCAAGAAAAGGTAATTTAAAAATGGCTGACTATCTTCGTGTTATGAAAAATCACGCTGACAACTTAGGGCAAGCTGGGAGTCCAGTTACCACCCGATCTCTTGTGTCAGAAGTTCTTTTAGGGTTAGATGAAGAGTACAACCCTGTTGTGGAGATGATTCAAGGCAGAATAGCCACCTCAGTGAACATGGCTAGCTCCAAAGATACTGGTACACAGAGGAATCAAAGCTCATCGACCAATGGAAGATCAAACAATTTTGGCCGTGGAAATCTTCGAGGAGGAGGACAACGTGGCTGA
Coding sequence (CDS)
ATGGCCAACGCCAATTCAACCGGTTTTCCTGCCGCCTCCACCGGAACTACAAATTTCAGTAGTCCTCCGCTAAATCAACTGTTGAACCAAATAACCTCTATAAAGCTCGATAGAGGTAACTTTTTGTTATGGAAAAACCTGGCATTACCAATTTTACGCAGCTACAAACTGGAAGGGTATTTGTCTGGTTTGAAGCCCTATCCTCCGAAGTTTATTCAAGCTGCGACCAGCTCCTCTCCCCCATCGTCGACTGGAGAAGGAGCCATTGATGAAGCAACTGCAACAAGGCAGACAACTCCCAATCCAGATTATGAGTCGTGGATTGCCATTGATCAACTTCTATTGGGTTGGCTTTACAACTCTATGTCTCTTGAGGTAGCCACCCAAGTAATGGGATTCGAGAATGCTCAAGATCTGTGGGCAGCGGTTCAAGAGTTGTTCGGTGTTCAATCTCGAGCAGAGGAAGACTACTTACGTCAGGTATTTCAACAGTCAAGAAAAGGTAATTTAAAAATGGCTGACTATCTTCGTGTTATGAAAAATCACGCTGACAACTTAGGGCAAGCTGGGAGTCCAGTTACCACCCGATCTCTTGTGTCAGAAGTTCTTTTAGGGTTAGATGAAGAGTACAACCCTGTTGTGGAGATGATTCAAGGCAGAATAGCCACCTCAGTGAACATGGCTAGCTCCAAAGATACTGGTACACAGAGGAATCAAAGCTCATCGACCAATGGAAGATCAAACAATTTTGGCCGTGGAAATCTTCGAGGAGGAGGACAACGTGGCTGA
Protein sequence
MANANSTGFPAASTGTTNFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGYLSGLKPYPPKFIQAATSSSPPSSTGEGAIDEATATRQTTPNPDYESWIAIDQLLLGWLYNSMSLEVATQVMGFENAQDLWAAVQELFGVQSRAEEDYLRQVFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTTRSLVSEVLLGLDEEYNPVVEMIQGRIATSVNMASSKDTGTQRNQSSSTNGRSNNFGRGNLRGGGQRG
Homology
BLAST of Lag0008300 vs. NCBI nr
Match:
XP_022151683.1 (uncharacterized protein LOC111019598 [Momordica charantia])
HSP 1 Score: 246.1 bits (627), Expect = 3.3e-61
Identity = 146/284 (51.41%), Postives = 184/284 (64.79%), Query Frame = 0
Query: 10 PAASTGTTNFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGYLSGLKPYPP 69
PA +G F+SPPLNQLLNQITSIK+DRGNFLLW+NLALPILRSYKL YL+G KP PP
Sbjct: 14 PAVVSGAV-FTSPPLNQLLNQITSIKMDRGNFLLWQNLALPILRSYKLFDYLTGDKPCPP 73
Query: 70 KFIQAATSSSPPSSTGEGAIDEATATRQTTPNPDYESWIAIDQLLLGWLYNSMSLEVATQ 129
+ P+ T ++ T NP YE+WI +D+LLLGWLYNSM+ +VA Q
Sbjct: 74 THL-------VPTDTPTNIEGSTSSQSSPTLNPTYEAWIVVDKLLLGWLYNSMAADVAMQ 133
Query: 130 VMGFENAQDLWAAVQELFGVQSRAEEDYLRQVFQQSRKGNLKMADYLRVMKNHADNLGQA 189
VMGF +++LW AVQELFGVQSRAE DYL+QVFQQ+ KG+L+M +YL++MK+HADNL A
Sbjct: 134 VMGFSTSRELWTAVQELFGVQSRAEVDYLKQVFQQTCKGSLQMIEYLKLMKSHADNLALA 193
Query: 190 GSPVTTRSLVSEVLLGLDEEYNPVVEMIQGRIATS--------------VNMASSKDTGT 249
GS V+ R LVS+VL GLDEEYNP+V +QG++ S + +S +G
Sbjct: 194 GSSVSVRDLVSQVLTGLDEEYNPIVVAVQGKVNLSWSEMHAELLTYEKRLEYQNSLKSGI 253
Query: 250 QRNQSSS----------------TNGRSNNFGRGNLRGGG-QRG 263
NQ+ + TN +N+ G RGGG QRG
Sbjct: 254 PINQTQTPSVNYVDGRSFQTNQRTNNGNNSHGSNTHRGGGYQRG 289
BLAST of Lag0008300 vs. NCBI nr
Match:
KAA0026100.1 (uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa])
HSP 1 Score: 240.4 bits (612), Expect = 1.8e-59
Identity = 129/223 (57.85%), Postives = 161/223 (72.20%), Query Frame = 0
Query: 1 MANANSTGFPAASTGTTNFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGY 60
MANA T P S + FS+PPLNQ+LNQ+ ++KLDR N+LLWK LALPIL+ YKLEG+
Sbjct: 1 MANAQPTAAP-PSLSSAGFSNPPLNQILNQLATVKLDRKNYLLWKTLALPILKGYKLEGH 60
Query: 61 LSGLKPYPPKFIQAATSSSPPSSTGEGAIDEATATRQTTP---NPDYESWIAIDQLLLGW 120
L+G P P F+ +A SSS + T EGA A+ TP N +E W+ D LLLGW
Sbjct: 61 LTGETPCPSHFVLSA-SSSNTTVTEEGADATIGASSSITPRIVNSLFEQWVTTDLLLLGW 120
Query: 121 LYNSMSLEVATQVMGFENAQDLWAAVQELFGVQSRAEEDYLRQVFQQSRKGNLKMADYLR 180
LYNSM+ +VA Q+MGF N +DLW A Q+ FGVQSRAEED+LRQ+ Q +RKGN KM +YL
Sbjct: 121 LYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGNTKMEEYLL 180
Query: 181 VMKNHADNLGQAGSPVTTRSLVSEVLLGLDEEYNPVVEMIQGR 221
VMK + DNLGQ GSPV R+L+S+VLLGLDE YN V+ +IQG+
Sbjct: 181 VMKTNVDNLGQVGSPVPRRALISQVLLGLDEVYNLVIVVIQGK 221
BLAST of Lag0008300 vs. NCBI nr
Match:
XP_038902487.1 (uncharacterized protein LOC120089143 [Benincasa hispida])
HSP 1 Score: 221.5 bits (563), Expect = 8.7e-54
Identity = 128/244 (52.46%), Postives = 163/244 (66.80%), Query Frame = 0
Query: 32 TSIKLDRGNFLLWKNLALPILRSYKLEGYLSGLKPYPPKFIQA---ATSSSPPSSTG--- 91
T+IKLD+ N+LLW+NLALPILRSY+LEG+L+G P PP+F A +T++ PP
Sbjct: 43 TTIKLDQENYLLWRNLALPILRSYRLEGHLTGEDPCPPRFSVATDQSTATVPPGDEAGLG 102
Query: 92 ------------EGAIDEATATRQTTPNPDYESWIAIDQLLLGWLYNSMSLEVATQVMGF 151
+G + ++ NP YES +DQLLLGWLYN M+ EVA QVMG+
Sbjct: 103 GQYSGIASLTPQQGITTASNSSPVLQVNPFYESRTVVDQLLLGWLYNFMTAEVAMQVMGY 162
Query: 152 ENAQDLWAAVQELFGVQSRAEEDYLRQVFQQSRKGNLKMADYLRVMKNHADNLGQAGSPV 211
EN + LWAA+QELFG+QSRA EDYLRQVFQQ+ KG +KM +YLRVMK H+DNLG GSPV
Sbjct: 163 ENYKYLWAAIQELFGLQSRAGEDYLRQVFQQTCKGAMKMPEYLRVMKTHSDNLGLTGSPV 222
Query: 212 TTRSLVSEVLLGLDEEYNPVVEMIQGRIATSVNMASSKDTGTQRNQSSSTNGRSNNFGRG 258
TR+LVS+VLLGLDEE+NP V IQGR S ++ ++ Q+++ N R G G
Sbjct: 223 PTRALVSQVLLGLDEEFNPFVATIQGRSEISWTNMQTELLAFEKRQTNNNNQRG---GSG 282
BLAST of Lag0008300 vs. NCBI nr
Match:
TYJ96311.1 (uncharacterized protein E5676_scaffold1970G00140 [Cucumis melo var. makuwa])
HSP 1 Score: 216.1 bits (549), Expect = 3.7e-52
Identity = 116/204 (56.86%), Postives = 145/204 (71.08%), Query Frame = 0
Query: 1 MANANSTGFPAASTGTTNFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGY 60
MANA T P S + FS+PPLNQ+LNQ+ ++KLDR N+LLWK LALPIL+ YKLEG+
Sbjct: 1 MANAQPTAAP-PSLSSAGFSNPPLNQILNQLATVKLDRKNYLLWKTLALPILKGYKLEGH 60
Query: 61 LSGLKPYPPKFIQAATSSSPPSSTGEGAIDEATATRQTTP---NPDYESWIAIDQLLLGW 120
L+G P P F+ +A SSS + T EGA A+ TP N +E W+ D LLLGW
Sbjct: 61 LTGETPCPSHFVLSA-SSSNTTVTEEGADATIGASSSITPRIVNSLFEQWVTTDLLLLGW 120
Query: 121 LYNSMSLEVATQVMGFENAQDLWAAVQELFGVQSRAEEDYLRQVFQQSRKGNLKMADYLR 180
LYNSM+ +VA Q+MGF N +DLW A Q+ FGVQSRAEED+LRQ+ Q +RKGN KM +YL
Sbjct: 121 LYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGNTKMEEYLL 180
Query: 181 VMKNHADNLGQAGSPVTTRSLVSE 202
VMK + DNLGQ GSPV R+L+S+
Sbjct: 181 VMKTNVDNLGQVGSPVPRRALISQ 202
BLAST of Lag0008300 vs. NCBI nr
Match:
KAA0067279.1 (uncharacterized protein E6C27_scaffold418G001000 [Cucumis melo var. makuwa])
HSP 1 Score: 207.6 bits (527), Expect = 1.3e-49
Identity = 108/199 (54.27%), Postives = 138/199 (69.35%), Query Frame = 0
Query: 5 NSTGFPAASTGTTNFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGYLSGL 64
N+ +T TT+F++P LNQ+LNQ+T+IKLDRGN+LLWK LALPIL+SYKL +L G
Sbjct: 3 NAAPISVTATPTTSFTNPLLNQILNQLTTIKLDRGNYLLWKTLALPILKSYKLNSHLFGE 62
Query: 65 KPYPPKFIQAATSSSPPSSTGEGAIDEATATRQT---TPNPDYESWIAIDQLLLGWLYNS 124
P PK I T + G + T++ T T NP YE WI D LLLGWLYNS
Sbjct: 63 SPCLPKIIMLTTQPNESIVENAGEPSQETSSSSTAVVTVNPKYERWITTDLLLLGWLYNS 122
Query: 125 MSLEVATQVMGFENAQDLWAAVQELFGVQSRAEEDYLRQVFQQSRKGNLKMADYLRVMKN 184
M+ EV Q+MGF NA+DLW A Q+LFG+QSRA+ED+L Q FQ ++KGNL M +YLR MKN
Sbjct: 123 MTPEVTIQLMGFTNAKDLWEATQDLFGIQSRAKEDFLHQTFQTTKKGNLNMEEYLRTMKN 182
Query: 185 HADNLGQAGSPVTTRSLVS 201
+ +NLGQA S V + ++VS
Sbjct: 183 NVNNLGQADSLVPSGAIVS 201
BLAST of Lag0008300 vs. ExPASy TrEMBL
Match:
A0A6J1DCW4 (uncharacterized protein LOC111019598 OS=Momordica charantia OX=3673 GN=LOC111019598 PE=4 SV=1)
HSP 1 Score: 246.1 bits (627), Expect = 1.6e-61
Identity = 146/284 (51.41%), Postives = 184/284 (64.79%), Query Frame = 0
Query: 10 PAASTGTTNFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGYLSGLKPYPP 69
PA +G F+SPPLNQLLNQITSIK+DRGNFLLW+NLALPILRSYKL YL+G KP PP
Sbjct: 14 PAVVSGAV-FTSPPLNQLLNQITSIKMDRGNFLLWQNLALPILRSYKLFDYLTGDKPCPP 73
Query: 70 KFIQAATSSSPPSSTGEGAIDEATATRQTTPNPDYESWIAIDQLLLGWLYNSMSLEVATQ 129
+ P+ T ++ T NP YE+WI +D+LLLGWLYNSM+ +VA Q
Sbjct: 74 THL-------VPTDTPTNIEGSTSSQSSPTLNPTYEAWIVVDKLLLGWLYNSMAADVAMQ 133
Query: 130 VMGFENAQDLWAAVQELFGVQSRAEEDYLRQVFQQSRKGNLKMADYLRVMKNHADNLGQA 189
VMGF +++LW AVQELFGVQSRAE DYL+QVFQQ+ KG+L+M +YL++MK+HADNL A
Sbjct: 134 VMGFSTSRELWTAVQELFGVQSRAEVDYLKQVFQQTCKGSLQMIEYLKLMKSHADNLALA 193
Query: 190 GSPVTTRSLVSEVLLGLDEEYNPVVEMIQGRIATS--------------VNMASSKDTGT 249
GS V+ R LVS+VL GLDEEYNP+V +QG++ S + +S +G
Sbjct: 194 GSSVSVRDLVSQVLTGLDEEYNPIVVAVQGKVNLSWSEMHAELLTYEKRLEYQNSLKSGI 253
Query: 250 QRNQSSS----------------TNGRSNNFGRGNLRGGG-QRG 263
NQ+ + TN +N+ G RGGG QRG
Sbjct: 254 PINQTQTPSVNYVDGRSFQTNQRTNNGNNSHGSNTHRGGGYQRG 289
BLAST of Lag0008300 vs. ExPASy TrEMBL
Match:
A0A5A7SIT7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G00360 PE=4 SV=1)
HSP 1 Score: 240.4 bits (612), Expect = 8.8e-60
Identity = 129/223 (57.85%), Postives = 161/223 (72.20%), Query Frame = 0
Query: 1 MANANSTGFPAASTGTTNFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGY 60
MANA T P S + FS+PPLNQ+LNQ+ ++KLDR N+LLWK LALPIL+ YKLEG+
Sbjct: 1 MANAQPTAAP-PSLSSAGFSNPPLNQILNQLATVKLDRKNYLLWKTLALPILKGYKLEGH 60
Query: 61 LSGLKPYPPKFIQAATSSSPPSSTGEGAIDEATATRQTTP---NPDYESWIAIDQLLLGW 120
L+G P P F+ +A SSS + T EGA A+ TP N +E W+ D LLLGW
Sbjct: 61 LTGETPCPSHFVLSA-SSSNTTVTEEGADATIGASSSITPRIVNSLFEQWVTTDLLLLGW 120
Query: 121 LYNSMSLEVATQVMGFENAQDLWAAVQELFGVQSRAEEDYLRQVFQQSRKGNLKMADYLR 180
LYNSM+ +VA Q+MGF N +DLW A Q+ FGVQSRAEED+LRQ+ Q +RKGN KM +YL
Sbjct: 121 LYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGNTKMEEYLL 180
Query: 181 VMKNHADNLGQAGSPVTTRSLVSEVLLGLDEEYNPVVEMIQGR 221
VMK + DNLGQ GSPV R+L+S+VLLGLDE YN V+ +IQG+
Sbjct: 181 VMKTNVDNLGQVGSPVPRRALISQVLLGLDEVYNLVIVVIQGK 221
BLAST of Lag0008300 vs. ExPASy TrEMBL
Match:
A0A5D3BCH9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1970G00140 PE=4 SV=1)
HSP 1 Score: 216.1 bits (549), Expect = 1.8e-52
Identity = 116/204 (56.86%), Postives = 145/204 (71.08%), Query Frame = 0
Query: 1 MANANSTGFPAASTGTTNFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGY 60
MANA T P S + FS+PPLNQ+LNQ+ ++KLDR N+LLWK LALPIL+ YKLEG+
Sbjct: 1 MANAQPTAAP-PSLSSAGFSNPPLNQILNQLATVKLDRKNYLLWKTLALPILKGYKLEGH 60
Query: 61 LSGLKPYPPKFIQAATSSSPPSSTGEGAIDEATATRQTTP---NPDYESWIAIDQLLLGW 120
L+G P P F+ +A SSS + T EGA A+ TP N +E W+ D LLLGW
Sbjct: 61 LTGETPCPSHFVLSA-SSSNTTVTEEGADATIGASSSITPRIVNSLFEQWVTTDLLLLGW 120
Query: 121 LYNSMSLEVATQVMGFENAQDLWAAVQELFGVQSRAEEDYLRQVFQQSRKGNLKMADYLR 180
LYNSM+ +VA Q+MGF N +DLW A Q+ FGVQSRAEED+LRQ+ Q +RKGN KM +YL
Sbjct: 121 LYNSMTPDVAIQLMGFTNVEDLWDATQDFFGVQSRAEEDFLRQMLQTTRKGNTKMEEYLL 180
Query: 181 VMKNHADNLGQAGSPVTTRSLVSE 202
VMK + DNLGQ GSPV R+L+S+
Sbjct: 181 VMKTNVDNLGQVGSPVPRRALISQ 202
BLAST of Lag0008300 vs. ExPASy TrEMBL
Match:
A0A5A7VPY0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold418G001000 PE=4 SV=1)
HSP 1 Score: 207.6 bits (527), Expect = 6.3e-50
Identity = 108/199 (54.27%), Postives = 138/199 (69.35%), Query Frame = 0
Query: 5 NSTGFPAASTGTTNFSSPPLNQLLNQITSIKLDRGNFLLWKNLALPILRSYKLEGYLSGL 64
N+ +T TT+F++P LNQ+LNQ+T+IKLDRGN+LLWK LALPIL+SYKL +L G
Sbjct: 3 NAAPISVTATPTTSFTNPLLNQILNQLTTIKLDRGNYLLWKTLALPILKSYKLNSHLFGE 62
Query: 65 KPYPPKFIQAATSSSPPSSTGEGAIDEATATRQT---TPNPDYESWIAIDQLLLGWLYNS 124
P PK I T + G + T++ T T NP YE WI D LLLGWLYNS
Sbjct: 63 SPCLPKIIMLTTQPNESIVENAGEPSQETSSSSTAVVTVNPKYERWITTDLLLLGWLYNS 122
Query: 125 MSLEVATQVMGFENAQDLWAAVQELFGVQSRAEEDYLRQVFQQSRKGNLKMADYLRVMKN 184
M+ EV Q+MGF NA+DLW A Q+LFG+QSRA+ED+L Q FQ ++KGNL M +YLR MKN
Sbjct: 123 MTPEVTIQLMGFTNAKDLWEATQDLFGIQSRAKEDFLHQTFQTTKKGNLNMEEYLRTMKN 182
Query: 185 HADNLGQAGSPVTTRSLVS 201
+ +NLGQA S V + ++VS
Sbjct: 183 NVNNLGQADSLVPSGAIVS 201
BLAST of Lag0008300 vs. ExPASy TrEMBL
Match:
A0A6J1D5J0 (uncharacterized protein LOC111017501 OS=Momordica charantia OX=3673 GN=LOC111017501 PE=4 SV=1)
HSP 1 Score: 204.9 bits (520), Expect = 4.1e-49
Identity = 115/187 (61.50%), Postives = 136/187 (72.73%), Query Frame = 0
Query: 71 FIQAATSSSPPSSTGEGAIDEATATRQTTPNPDYESWIAIDQLLLGWLYNSMSLEVATQV 130
F+Q + + S T A ++ + NP YESW+ DQLLLGWLYNSM+ EVATQV
Sbjct: 2 FVQQSIGNMETSQTNISAPSSSSIATEAAINPLYESWVTTDQLLLGWLYNSMTPEVATQV 61
Query: 131 MGFENAQDLWAAVQELFGVQSRAEEDYLRQVFQQSRKGNLKMADYLRVMKNHADNLGQAG 190
MG+ENA DLWAA+QELFGVQS+AEEDYLRQVFQQ+RKG+LKM D+LRVMK+HADNLGQAG
Sbjct: 62 MGYENACDLWAAIQELFGVQSQAEEDYLRQVFQQTRKGSLKMTDFLRVMKSHADNLGQAG 121
Query: 191 SPVTTRSLVSEVLLGLDEEYNPVVEMIQGRIATS-VNMAS---SKDTGTQRNQSSSTNGR 250
SPV TRSL+S+VLLGLDEEYNPVV IQG+ S M + S G QR +S
Sbjct: 122 SPVPTRSLISQVLLGLDEEYNPVVATIQGKRGISWPEMQAEFRSVSGGNQRQNQNSQPPF 181
Query: 251 SNNFGRG 254
+NN G G
Sbjct: 182 NNNRGGG 188
BLAST of Lag0008300 vs. TAIR 10
Match:
AT5G48050.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )
HSP 1 Score: 50.4 bits (119), Expect = 2.5e-06
Identity = 32/123 (26.02%), Postives = 63/123 (51.22%), Query Frame = 0
Query: 98 TTPNPDYES-WIAIDQLLLGWLYNSMSLEVATQVMGFE-NAQDLWAAVQELFGVQSRAEE 157
+TP P E W D L+ W+Y +++ + ++ A+DLW +++ LF A
Sbjct: 57 STPTPMTEKRWKERDGLVKMWIYGTITDSLLDTIIKVGCTARDLWLSLENLFRDNKEARA 116
Query: 158 DYLRQVFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTTRSLVSEVLLGLDEEYNPVVE 217
+ + +L + +Y + +K+ +D L SP++ R LV +L GL E+Y+ ++
Sbjct: 117 LQFENELRTTTIDDLSVHEYCQKLKSLSDLLTNVDSPISDRVLVMHLLNGLTEKYDYILN 176
Query: 218 MIQ 219
+I+
Sbjct: 177 VIK 179
BLAST of Lag0008300 vs. TAIR 10
Match:
AT1G34070.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G48050.1); Has 648 Blast hits to 647 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 25; Plants - 607; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 48.9 bits (115), Expect = 7.2e-06
Identity = 27/85 (31.76%), Postives = 47/85 (55.29%), Query Frame = 0
Query: 136 AQDLWAAVQELFGVQSRAEEDYLRQVFQQSRKGNLKMADYLRVMKNHADNLGQAGSPVTT 195
++D+W ++ F A L + G++++ADY R MK AD+L PVT
Sbjct: 95 SRDIWLRIKNQFRNNKDARALRLDSELRTKDIGDMRVADYYRKMKKLADSLRNVDVPVTD 154
Query: 196 RSLVSEVLLGLDEEYNPVVEMIQGR 221
R+LV VL GL+ +++ ++ +I+ R
Sbjct: 155 RNLVMYVLNGLNPKFDNIINVIKHR 179
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022151683.1 | 3.3e-61 | 51.41 | uncharacterized protein LOC111019598 [Momordica charantia] | [more] |
KAA0026100.1 | 1.8e-59 | 57.85 | uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa] | [more] |
XP_038902487.1 | 8.7e-54 | 52.46 | uncharacterized protein LOC120089143 [Benincasa hispida] | [more] |
TYJ96311.1 | 3.7e-52 | 56.86 | uncharacterized protein E5676_scaffold1970G00140 [Cucumis melo var. makuwa] | [more] |
KAA0067279.1 | 1.3e-49 | 54.27 | uncharacterized protein E6C27_scaffold418G001000 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1DCW4 | 1.6e-61 | 51.41 | uncharacterized protein LOC111019598 OS=Momordica charantia OX=3673 GN=LOC111019... | [more] |
A0A5A7SIT7 | 8.8e-60 | 57.85 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5D3BCH9 | 1.8e-52 | 56.86 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7VPY0 | 6.3e-50 | 54.27 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A6J1D5J0 | 4.1e-49 | 61.50 | uncharacterized protein LOC111017501 OS=Momordica charantia OX=3673 GN=LOC111017... | [more] |
Match Name | E-value | Identity | Description | |
AT5G48050.1 | 2.5e-06 | 26.02 | CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BE... | [more] |
AT1G34070.1 | 7.2e-06 | 31.76 | CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BE... | [more] |