Lag0007917 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0007917
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr9: 8192375 .. 8194737 (+)
RNA-Seq Expression	Lag0007917
Synteny	Lag0007917

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAAAACGGAAGAAAAAGCACAAAAAAGAACGAGTGAGAGGTTGAGATCTACTGGGAAAATCTTGGGGAAAAAGGTGCAAAAGGATTCAAACCCCATAACGATCAACAGTGAAGAGGTAAAGTACTTTTTTGGTTTTGTTTGTTTCCAATTAAAATGAGTCTTTGTTTTGGGATGTATGTAGGATAACACCGATCAAAGTACATCAATGGAGAAAAAAACAGAGAAAAGAACAAAAAAAAAGAGATGGGGATAATCGGGAGCATGAAAAGAAAAATAAGCGCCCAAGACATGGAAAGGTAAGGAGTCGACTCTAAGACACTTGAGTTTGCCTAATGACATAAAGCTATAAATCTGATAATTGAAAATTTATTGCTGAAGGGAGAAGATGAAGAGGACGAAGCTGAGGTAAGGTTATACAATTATAGTGTATATGTAAATTATATAGAGATTAACAATTACTTCCTTTTGTAGGAGAAAGAAAATACGAAAATGACCGAGGATGAAGAAGAAGAAAGTTCAAATAAACCTTCTGAAATTGAAAAGGGAAGCTCGGGAGGAGAGAATGAAGAGACTCCTACCAAAACACTGAAGAATGATAGGACTGGAGAAAATAAGGTATTTTGTTATTTACATTGTAGTAATATTGTTATACATTGTAATTGCATAAAAACCAGTGAAAAAAATGGGATTGTAGGTAACAAAGAAGCAACGAAGCAAAGGTGATGTTCGAGGGGCAAAAAGGAAAAACACCGTCGATGATGACACCGAGGTAAGTAAACATTTATATAAAACTAATTAGAACATTTATAATGTCATTATTATTTGACTGATCTGTTAGGACATATTGTTATTTAGGATGGAGAATTTATAATGCCGAATTCAAAGAGGACACAACCTTTAAGAATCAACCTGCAGTTGGGGAATGATGTTTTAGAAAAAATAAAATCCATAATACCAGATAGGGTACAGGAGAGATTTAGAAATAGTTGCTTTGGAAATTACCTAGACTTTGCCAACTCCTATTACATTTGATTCAAAGGCAATGTAGGCTGCAGAAAAAGAATGAACTGAAATGTTTGATAGGAGGGAAAGTATGTACATTTGGACTGCGAGAATATGCATGGATAACTGGGCTAAACTGTGAGCCAATCCCAAAAATTGATCCAGAACAGATAAAAGGGGACCAATATACAAAAAAAACCTTTTTTGAGTGGGAAAAGACAATGAGTAGGAAACTATTGAACATTGCACTAAACATGAGTAAAAGTGGAAGTGATGACGTCATGTTAAAGGTGTCACTTCTGTATTTTTTTGGAGAACTTCCTACTTGCAAAACAAGACACAGTAAACATTGAGATGGAACATATAATTATGGTGGATGATGAAGACTTGTTTAGCTCATACCCTTGGGGGTAGTAGCGTAAGAACTTTTAGTGGATTTCATGCAAAAGGCCATAAAGAGCAAGACAACAACTGGGATATCGATGGGGGGGGTCATATTTCCAATCCTAGTTTGGGCATATGAAACAATCCCAACAATTAGTTCACCTCAATTTTTTTATGCAAGAAAAATGAAAAACCGAATTCCAAGAATCCTATATTGGGTTGCTGACGTGCAACCAAAATGGAAAGACTGGGAAAAGAAGGTCTTCGAGTCAGAGGTAATTTACATAATCCTTATTCTGTAAATTTAAAGATATACGGTATATTTGTTACTAAAATACATTTTGCTTATTACATCAAATAGTTGGAGGTGTACCCAATGATTGCTACTGATGAGGAGATGGGGATGACCAACTTTAAACATTTGTTGATAAGGAGATAGAGTTTAGAAAGAATTTGGAGGAACAACTATCGAAGCAGAAGCCAGGAGCCAATATAGTAGATTTAACTTCAAACAAATCGGCACCAACCATACTCGAAAATTCATACATAAGAGAAAGGCTAGATTCCATTGAGAGTAAATTGAACATAAAATTGGATCAAGTTATAGAATCAATAAATTCTTTGGTGGAATATCTTAAAACAGAAAGGAGGATGATGAGTGGCAATGCAAGCCATGATATCTACAAGGAACAATGTATTTGTGATCAAAATTGTTTGAATTATACCGTATTTGTAGTATATCCAAACATGAATGCATCTCAATTTTATAAAATTACATAGGGATCAACTGAATTTGAAAAAGAACTAGAAGAAATGGAAGAAGAACAACAGGAGCTAGAACATGAGAAAGAGGTTTCTGAGAATGTAGACGACCGAAAGATGAGAGGCAAGAAGGATGATGATGAAGATGAGGACCCTCAAGGCCAAACACAACCGACGTCTTTGCTAGGTCACTCTGCGATCTCCCTCTAA

mRNA sequence

ATGGTGAAAACGGAAGAAAAAGCACAAAAAAGAACGAGTGAGAGGTTGAGATCTACTGGGAAAATCTTGGGGAAAAAGGTGCAAAAGGATTCAAACCCCATAACGATCAACAGTGAAGAGGGAGAAGATGAAGAGGACGAAGCTGAGGAGAAAGAAAATACGAAAATGACCGAGGATGAAGAAGAAGAAAGTTCAAATAAACCTTCTGAAATTGAAAAGGGAAGCTCGGGAGGAGAGAATGAAGAGACTCCTACCAAAACACTGAAGAATGATAGGACTGGAGAAAATAAGGTAACAAAGAAGCAACGAAGCAAAGGTGATGTTCGAGGGGCAAAAAGGAAAAACACCGTCGATGATGACACCGAGGGATCAACTGAATTTGAAAAAGAACTAGAAGAAATGGAAGAAGAACAACAGGAGCTAGAACATGAGAAAGAGGTTTCTGAGAATGTAGACGACCGAAAGATGAGAGGCAAGAAGGATGATGATGAAGATGAGGACCCTCAAGGCCAAACACAACCGACGTCTTTGCTAGGTCACTCTGCGATCTCCCTCTAA

Coding sequence (CDS)

ATGGTGAAAACGGAAGAAAAAGCACAAAAAAGAACGAGTGAGAGGTTGAGATCTACTGGGAAAATCTTGGGGAAAAAGGTGCAAAAGGATTCAAACCCCATAACGATCAACAGTGAAGAGGGAGAAGATGAAGAGGACGAAGCTGAGGAGAAAGAAAATACGAAAATGACCGAGGATGAAGAAGAAGAAAGTTCAAATAAACCTTCTGAAATTGAAAAGGGAAGCTCGGGAGGAGAGAATGAAGAGACTCCTACCAAAACACTGAAGAATGATAGGACTGGAGAAAATAAGGTAACAAAGAAGCAACGAAGCAAAGGTGATGTTCGAGGGGCAAAAAGGAAAAACACCGTCGATGATGACACCGAGGGATCAACTGAATTTGAAAAAGAACTAGAAGAAATGGAAGAAGAACAACAGGAGCTAGAACATGAGAAAGAGGTTTCTGAGAATGTAGACGACCGAAAGATGAGAGGCAAGAAGGATGATGATGAAGATGAGGACCCTCAAGGCCAAACACAACCGACGTCTTTGCTAGGTCACTCTGCGATCTCCCTCTAA

Protein sequence

MVKTEEKAQKRTSERLRSTGKILGKKVQKDSNPITINSEEGEDEEDEAEEKENTKMTEDEEEESSNKPSEIEKGSSGGENEETPTKTLKNDRTGENKVTKKQRSKGDVRGAKRKNTVDDDTEGSTEFEKELEEMEEEQQELEHEKEVSENVDDRKMRGKKDDDEDEDPQGQTQPTSLLGHSAISL

Homology

The following BLAST results are available for this feature:

BLAST of Lag0007917 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0007917 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 117..154
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 141..166
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..122
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..185
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..140
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..57
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..185

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0007917.1	Lag0007917.1	mRNA