Lag0007903 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0007903
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRNase H domain-containing protein
Locationchr9: 7624471 .. 7625166 (+)
RNA-Seq ExpressionLag0007903
SyntenyLag0007903
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTGGTATCTGCAAAATGAAAGTGGAGAGTGTTGACCATGCATTATGTGGTTGCAAAAGGTCCAAGCAAATATGTGATGTGTTGTTTCGACGAGTGGATAGTCAAATACCCATTCAAAATAATTTCGCTGATCGAATTGTATGGCTCACAAACCATCTTCAAGATGAGGAATTTGAGAAAGTTTGCATTGTGCTTTGGGCCATTTGGAATGATAGAAATGACTATACTCATAATCAGGAGATTATGTCGTGGCAAAGGCACTGTGAGTGGGTCATTGAATATTGGGAAGATATGAGGGGTATCGTGAAAGCCAATTCTGAGCCTATTGCGCAGTGTCGTTGGTGTCCTACTGTGCAAGCGGGCGAGGTTGCTCTTTATACGGATGGGGTAGTAAACCCGTATGTGAAAGGAGTGGGATATGGAGCTGACAATCAATTACGTGGGGCATTGGAACTTTTTGATCCCATCTCGCATGCTCCACTTGCAACAGAAGTCAACGCCTTAATTCATGGCCTTCGTTTGCTTCACCGCGTGCACATTTCCAAGGCTATGGTGTGTTCGGATTCTGTTAATGCAATAAAGATGATCACAGGAGCCGTCCAAATTACATCAGATGTGCATCATTGGATTCTACAAATTCGTAGTCTAGTTGCAGCTTTCGATAATTTATCGTTCAATTATGTGCCAAGGTAA

mRNA sequence

ATGTGTGGTATCTGCAAAATGAAAGTGGAGAGTGTTGACCATGCATTATGTGGTTGCAAAAGGTCCAAGCAAATATGTGATGTGTTGTTTCGACGAGTGGATAGTCAAATACCCATTCAAAATAATTTCGCTGATCGAATTGTATGGCTCACAAACCATCTTCAAGATGAGGAATTTGAGAAAGTTTGCATTGTGCTTTGGGCCATTTGGAATGATAGAAATGACTATACTCATAATCAGGAGATTATGTCGTGGCAAAGGCACTGTGAGTGGGTCATTGAATATTGGGAAGATATGAGGGGTATCGTGAAAGCCAATTCTGAGCCTATTGCGCAGTGTCGTTGGTGTCCTACTGTGCAAGCGGGCGAGGTTGCTCTTTATACGGATGGGGTAGTAAACCCGTATGTGAAAGGAGTGGGATATGGAGCTGACAATCAATTACGTGGGGCATTGGAACTTTTTGATCCCATCTCGCATGCTCCACTTGCAACAGAAGTCAACGCCTTAATTCATGGCCTTCGTTTGCTTCACCGCGTGCACATTTCCAAGGCTATGGTGTGTTCGGATTCTGTTAATGCAATAAAGATGATCACAGGAGCCGTCCAAATTACATCAGATGTGCATCATTGGATTCTACAAATTCGTAGTCTAGTTGCAGCTTTCGATAATTTATCGTTCAATTATGTGCCAAGGTAA

Coding sequence (CDS)

ATGTGTGGTATCTGCAAAATGAAAGTGGAGAGTGTTGACCATGCATTATGTGGTTGCAAAAGGTCCAAGCAAATATGTGATGTGTTGTTTCGACGAGTGGATAGTCAAATACCCATTCAAAATAATTTCGCTGATCGAATTGTATGGCTCACAAACCATCTTCAAGATGAGGAATTTGAGAAAGTTTGCATTGTGCTTTGGGCCATTTGGAATGATAGAAATGACTATACTCATAATCAGGAGATTATGTCGTGGCAAAGGCACTGTGAGTGGGTCATTGAATATTGGGAAGATATGAGGGGTATCGTGAAAGCCAATTCTGAGCCTATTGCGCAGTGTCGTTGGTGTCCTACTGTGCAAGCGGGCGAGGTTGCTCTTTATACGGATGGGGTAGTAAACCCGTATGTGAAAGGAGTGGGATATGGAGCTGACAATCAATTACGTGGGGCATTGGAACTTTTTGATCCCATCTCGCATGCTCCACTTGCAACAGAAGTCAACGCCTTAATTCATGGCCTTCGTTTGCTTCACCGCGTGCACATTTCCAAGGCTATGGTGTGTTCGGATTCTGTTAATGCAATAAAGATGATCACAGGAGCCGTCCAAATTACATCAGATGTGCATCATTGGATTCTACAAATTCGTAGTCTAGTTGCAGCTTTCGATAATTTATCGTTCAATTATGTGCCAAGGTAA

Protein sequence

MCGICKMKVESVDHALCGCKRSKQICDVLFRRVDSQIPIQNNFADRIVWLTNHLQDEEFEKVCIVLWAIWNDRNDYTHNQEIMSWQRHCEWVIEYWEDMRGIVKANSEPIAQCRWCPTVQAGEVALYTDGVVNPYVKGVGYGADNQLRGALELFDPISHAPLATEVNALIHGLRLLHRVHISKAMVCSDSVNAIKMITGAVQITSDVHHWILQIRSLVAAFDNLSFNYVPR
Homology
BLAST of Lag0007903 vs. NCBI nr
Match: XP_022158377.1 (uncharacterized protein LOC111024874 [Momordica charantia])

HSP 1 Score: 101.7 bits (252), Expect = 8.9e-18
Identity = 64/241 (26.56%), Postives = 110/241 (45.64%), Query Frame = 0

Query: 2    CGICKMKVESVDHALCGCKRSKQICDVLFRRVDSQIPIQNNFADRIVW--LTNHLQDEEF 61
            C IC  + ES+ HA   CKR++QI   LF  + + +  ++N +   +W  LT  L+ ++ 
Sbjct: 1173 CTICGDRRESIIHAFFHCKRARQIWRTLFPFL-TCLSAEDNISFLELWSSLTEQLEPKDL 1232

Query: 62   EKVCIVLWAIWNDRNDYTHNQEIMSWQRHCEWVIEYWEDMRGIVKANSEPIAQCRWCPTV 121
                I  W IWNDRN   H +++   +  CEW+  + +       +N  P  Q    P V
Sbjct: 1233 NLAAITGWGIWNDRNSLIHGKQVSPVEFKCEWLTPFLDSHSQAQMSNYSPRTQSNHRPVV 1292

Query: 122  Q------AGEVALYTDGVVNPYVKGVG---YGADNQLRGALELFDPISHAPLATEVNALI 181
            Q      +  + L TD          G     +   L  A  +  P   +PL  E+  ++
Sbjct: 1293 QYWRPSSSVSLKLNTDAACRGASTSFGCIIRDSSCSLVAATSIRVPFPLSPLLAEIRCIL 1352

Query: 182  HGLRLLHRVHISKAMVCSDSVNAIKMITGAVQITSDVHHWILQIRSLVAAFDNLSFNYVP 232
             GL+     + +   V SDS+ AI++I   +    D  +W+++I++L   F  +SF++  
Sbjct: 1353 EGLKFAAASNFTHLEVESDSLLAIQLIRNEIHTRGDEQNWVMEIQALTCCFAFISFSHSS 1412

BLAST of Lag0007903 vs. NCBI nr
Match: TXG71533.1 (hypothetical protein EZV62_000112 [Acer yangbiense])

HSP 1 Score: 80.9 bits (198), Expect = 1.6e-11
Identity = 62/235 (26.38%), Postives = 102/235 (43.40%), Query Frame = 0

Query: 2   CGICKMKVESVDHALCGCKRSKQI-CDVLFRRVDSQIPIQNNFADRIVWLTNHLQDEEFE 61
           C IC  K E+  HAL  C   K++ C   F   D+ +     F + ++  ++ L  +EFE
Sbjct: 7   CPICVKKPETSLHALWRCSSLKELRCVCNFAAGDASLD-NVPFIEFVISCSSQLVLKEFE 66

Query: 62  KVCIVLWAIWNDRNDYTHNQEIMSWQRHCEWVIEYWEDMRGIVK----ANSEPIAQCRWC 121
            +CI+ W +W+ RN   HN  I+      +W   +  D RG  +       E +   RW 
Sbjct: 67  LLCIIWWRVWHRRNKAVHNNNILPAAEIYDWGCNFITDYRGANERQYVQKVEVLRPPRWL 126

Query: 122 PTVQAGEVALYTDGVVNPYVKGVGYGADNQLRGALELFDPISHAPLATEVNALIHGLRLL 181
                G V + TD  +N  +K  G+G                + P   E  A++ GLR  
Sbjct: 127 -APPFGSVKINTDAALNFQLKVAGFG----------------NKPPIAEALAILEGLRFA 186

Query: 182 HRVHISKAMVCSDSVNAIKMITGAVQITSDVHHWILQIRSLVAAFDNLSFNYVPR 232
              + SK  + SD++  ++ I      +S+V   +  I  ++  F  +SF +VPR
Sbjct: 187 FSRNFSKVCLESDALCVVQAINNKSPPSSEVGVVLNDIFLVLDRFSEVSFAFVPR 223

BLAST of Lag0007903 vs. NCBI nr
Match: XP_022145060.1 (uncharacterized protein LOC111014578 [Momordica charantia])

HSP 1 Score: 80.9 bits (198), Expect = 1.6e-11
Identity = 50/185 (27.03%), Postives = 87/185 (47.03%), Query Frame = 0

Query: 2   CGICKMKVESVDHALCGCKRSKQICDVLFRRVDSQIPIQNNFADRIVWLTNHLQDEEFEK 61
           C +C  ++E+ DHAL  CKR+K++ ++L  +   Q    N+  D +++L   L   +F+ 
Sbjct: 28  CLVCGKQIETTDHALFKCKRAKEVWNILLPQAFPQCDFNNSVQDGLLYLVESLSTPDFDL 87

Query: 62  VCIVLWAIWNDRNDYTHNQEIMSWQRHCEWVIEYWEDMR-------GIVKANSEPIAQCR 121
           V + +WAIWNDRN     ++I   +   +W++ Y  D +       G  +   +  +  R
Sbjct: 88  VGVGVWAIWNDRNAIRMQRQIPDAKIRSDWILTYVRDFQVRDVPSLGDFRIQEDASSNDR 147

Query: 122 -----WCPTVQAGEVALYTDGVV--NPYVKGVGYGADNQLRGALELFDPISHAPLATEVN 173
                W P   AG + +  D     + +  G+G    N+ +G  ++    SH PL  E  
Sbjct: 148 TIENYWSPP-PAGWIKINVDAACKKHQFRTGIGIVCRNE-KG--QILAAASHDPLMAESL 207

BLAST of Lag0007903 vs. NCBI nr
Match: XP_024956542.1 (uncharacterized protein LOC112498908 [Citrus sinensis])

HSP 1 Score: 80.1 bits (196), Expect = 2.8e-11
Identity = 59/241 (24.48%), Postives = 107/241 (44.40%), Query Frame = 0

Query: 2    CGICKMKVESVDHALCGCKRSKQICDVLFRRVDSQIPIQNNFADRIVWLTNHLQDEEFEK 61
            C +CKM +E+V HAL  CK +K++  +    +D Q     +    +  +     + + + 
Sbjct: 850  CQLCKMGIENVFHALVDCKAAKKVWRLSLFYIDIQAAPGQDILSLLHGVKRMRSNADVDL 909

Query: 62   VCIVLWAIWNDRNDYT---HNQEIMSWQRHCEWVIEYWEDMR---GIVKANSEPIAQCRW 121
              ++LWA WN RN +      +   S     E V+E ++ ++    +     + +AQ  W
Sbjct: 910  FAVMLWAKWNARNQWLFKGKRENPQSVVAKAEAVMEAYKRVQPSADVSHGKQQKVAQLGW 969

Query: 122  CPTVQAGEVALYTDGVVNPYVKGVGYGA----DNQLRGALELFDPISHAPLA-TEVNALI 181
             P  Q G V + TD   N      G GA    +N    A  +     H  +A  E  A+ 
Sbjct: 970  NPP-QEGFVKINTDAATNSEKNLAGLGAVIRDENGQVTATAIKVSKFHGSVAYAEAEAME 1029

Query: 182  HGLRLLHRVHISKAMVCSDSVNAIKMITGAVQITSDVHHWILQIRSLVAAFDNLSFNYVP 232
             GL++    H+   ++ SDS   + ++       S+++  +L+I+ L  +FD++S  Y  
Sbjct: 1030 WGLQVAKDAHVKDVIMESDSQEVVSLVNNRQGSRSEIYWVVLEIQKLKESFDHVSCVYTH 1089

BLAST of Lag0007903 vs. NCBI nr
Match: XP_024178556.2 (uncharacterized protein LOC112184522 [Rosa chinensis])

HSP 1 Score: 80.1 bits (196), Expect = 2.8e-11
Identity = 64/249 (25.70%), Postives = 106/249 (42.57%), Query Frame = 0

Query: 2    CGICKMKVESVDHALCGCKRSKQICDVLFRRVDSQIPIQN-NFADRIVWLTNHLQDEEFE 61
            C +C   VE+V+H  C C  +++I           IP+ + ++ D  +   N L    FE
Sbjct: 869  CVVCSNGVETVEHLFCQCSLAREIVGA----PPFIIPVSSLSWKDWFLERVNSLSSGCFE 928

Query: 62   KVCIVLWAIWNDRNDYTHNQEIMSWQRHCE------------WVIEYWEDMRGIVKANSE 121
            K+ ++LW IW +RND         W R C             W  EY +  +  V  +  
Sbjct: 929  KLLVLLWNIWQNRND-------KLW-RDCSKTGPSIVASSMAWFEEYSQVNQATVSPDRR 988

Query: 122  -PIAQCRWCPTVQAGEVALYTDGVVNPYVKGVGYGA-----DNQLRGALELFDPISHAPL 181
             P  Q RW P    G + L  DG     ++  G G            A         +PL
Sbjct: 989  GPTGQTRWFPPA-TGTLKLNVDGAFLSSIQYGGTGGVLRNDQGDFIAAFSYRAEFVLSPL 1048

Query: 182  ATEVNALIHGLRLLHRVHISKAMVCSDSVNAIKMITGAVQITSDVHHWILQIRSLVAAFD 232
              E+ AL +GL  LH ++++K +V +D + A++ I  + +  S++   I  I+ LV    
Sbjct: 1049 HAELLALKYGLDFLHAMNVTKVVVETDCLVAVQAINSSTEDLSELGALIHDIKGLVGVVG 1104

BLAST of Lag0007903 vs. ExPASy TrEMBL
Match: A0A6J1DX30 (uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024874 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 4.3e-18
Identity = 64/241 (26.56%), Postives = 110/241 (45.64%), Query Frame = 0

Query: 2    CGICKMKVESVDHALCGCKRSKQICDVLFRRVDSQIPIQNNFADRIVW--LTNHLQDEEF 61
            C IC  + ES+ HA   CKR++QI   LF  + + +  ++N +   +W  LT  L+ ++ 
Sbjct: 1173 CTICGDRRESIIHAFFHCKRARQIWRTLFPFL-TCLSAEDNISFLELWSSLTEQLEPKDL 1232

Query: 62   EKVCIVLWAIWNDRNDYTHNQEIMSWQRHCEWVIEYWEDMRGIVKANSEPIAQCRWCPTV 121
                I  W IWNDRN   H +++   +  CEW+  + +       +N  P  Q    P V
Sbjct: 1233 NLAAITGWGIWNDRNSLIHGKQVSPVEFKCEWLTPFLDSHSQAQMSNYSPRTQSNHRPVV 1292

Query: 122  Q------AGEVALYTDGVVNPYVKGVG---YGADNQLRGALELFDPISHAPLATEVNALI 181
            Q      +  + L TD          G     +   L  A  +  P   +PL  E+  ++
Sbjct: 1293 QYWRPSSSVSLKLNTDAACRGASTSFGCIIRDSSCSLVAATSIRVPFPLSPLLAEIRCIL 1352

Query: 182  HGLRLLHRVHISKAMVCSDSVNAIKMITGAVQITSDVHHWILQIRSLVAAFDNLSFNYVP 232
             GL+     + +   V SDS+ AI++I   +    D  +W+++I++L   F  +SF++  
Sbjct: 1353 EGLKFAAASNFTHLEVESDSLLAIQLIRNEIHTRGDEQNWVMEIQALTCCFAFISFSHSS 1412

BLAST of Lag0007903 vs. ExPASy TrEMBL
Match: A0A5C7IQ65 (RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_000112 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 7.8e-12
Identity = 62/235 (26.38%), Postives = 102/235 (43.40%), Query Frame = 0

Query: 2   CGICKMKVESVDHALCGCKRSKQI-CDVLFRRVDSQIPIQNNFADRIVWLTNHLQDEEFE 61
           C IC  K E+  HAL  C   K++ C   F   D+ +     F + ++  ++ L  +EFE
Sbjct: 7   CPICVKKPETSLHALWRCSSLKELRCVCNFAAGDASLD-NVPFIEFVISCSSQLVLKEFE 66

Query: 62  KVCIVLWAIWNDRNDYTHNQEIMSWQRHCEWVIEYWEDMRGIVK----ANSEPIAQCRWC 121
            +CI+ W +W+ RN   HN  I+      +W   +  D RG  +       E +   RW 
Sbjct: 67  LLCIIWWRVWHRRNKAVHNNNILPAAEIYDWGCNFITDYRGANERQYVQKVEVLRPPRWL 126

Query: 122 PTVQAGEVALYTDGVVNPYVKGVGYGADNQLRGALELFDPISHAPLATEVNALIHGLRLL 181
                G V + TD  +N  +K  G+G                + P   E  A++ GLR  
Sbjct: 127 -APPFGSVKINTDAALNFQLKVAGFG----------------NKPPIAEALAILEGLRFA 186

Query: 182 HRVHISKAMVCSDSVNAIKMITGAVQITSDVHHWILQIRSLVAAFDNLSFNYVPR 232
              + SK  + SD++  ++ I      +S+V   +  I  ++  F  +SF +VPR
Sbjct: 187 FSRNFSKVCLESDALCVVQAINNKSPPSSEVGVVLNDIFLVLDRFSEVSFAFVPR 223

BLAST of Lag0007903 vs. ExPASy TrEMBL
Match: A0A6J1CTE3 (uncharacterized protein LOC111014578 OS=Momordica charantia OX=3673 GN=LOC111014578 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 7.8e-12
Identity = 50/185 (27.03%), Postives = 87/185 (47.03%), Query Frame = 0

Query: 2   CGICKMKVESVDHALCGCKRSKQICDVLFRRVDSQIPIQNNFADRIVWLTNHLQDEEFEK 61
           C +C  ++E+ DHAL  CKR+K++ ++L  +   Q    N+  D +++L   L   +F+ 
Sbjct: 28  CLVCGKQIETTDHALFKCKRAKEVWNILLPQAFPQCDFNNSVQDGLLYLVESLSTPDFDL 87

Query: 62  VCIVLWAIWNDRNDYTHNQEIMSWQRHCEWVIEYWEDMR-------GIVKANSEPIAQCR 121
           V + +WAIWNDRN     ++I   +   +W++ Y  D +       G  +   +  +  R
Sbjct: 88  VGVGVWAIWNDRNAIRMQRQIPDAKIRSDWILTYVRDFQVRDVPSLGDFRIQEDASSNDR 147

Query: 122 -----WCPTVQAGEVALYTDGVV--NPYVKGVGYGADNQLRGALELFDPISHAPLATEVN 173
                W P   AG + +  D     + +  G+G    N+ +G  ++    SH PL  E  
Sbjct: 148 TIENYWSPP-PAGWIKINVDAACKKHQFRTGIGIVCRNE-KG--QILAAASHDPLMAESL 207

BLAST of Lag0007903 vs. ExPASy TrEMBL
Match: A0A803PJK4 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 3.9e-11
Identity = 60/247 (24.29%), Postives = 105/247 (42.51%), Query Frame = 0

Query: 1    MCGICKMKVESVDHALCGCKRSKQICDVLFRRVDSQIPIQNNFADRIVWLTNHLQDEEFE 60
            +C +C+   ES+ HAL  CKR+K++       +D  I   + F D     +     +E E
Sbjct: 1555 ICSLCRGNNESIVHALFLCKRAKKVWRGSSFSIDRIIHESSTFKDLFFKASETWPQQELE 1614

Query: 61   KVCIVLWAIWNDRNDYTHNQEIMSWQRHCEWVIEYWED-----------MRGIVKANSEP 120
            +   +LW+IW +RN   H  +    +      + Y  +           +R  V  N+EP
Sbjct: 1615 QFACILWSIWTERNKEYHGTKPKPHEMLLVSALSYLGEYQTSRQATPTHLRNEVHRNNEP 1674

Query: 121  IAQCRWCPTVQAGEVALYTDGVVNPYVKGVGYGA-----DNQLRGALELFDPISHAPLAT 180
                +W     +G + L TD  V+   +  G+GA     D Q+  A+    P    P   
Sbjct: 1675 TVAPKWL-NPPSGRLKLNTDAAVDNVNRISGFGAILRDSDGQVVAAMSKPHPGCFKPEVM 1734

Query: 181  EVNALIHGLRLLHRVHISKAMVCSDSVNAIKMITGAVQITSDVHHWILQIRSLVAAFDNL 232
            E  AL + L+ L  +++    + +DS+  +K +       SD H  +  I  L++ F  +
Sbjct: 1735 EALALRYSLQWLQSMNLPIHYIETDSLLVVKGLQARSLNVSDFHSVLNDITILMSNFPGV 1794

BLAST of Lag0007903 vs. ExPASy TrEMBL
Match: A0A803P5M6 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 2.8e-09
Identity = 65/255 (25.49%), Postives = 101/255 (39.61%), Query Frame = 0

Query: 2    CGICKMKVESVDHALCGCKRSKQICDVLFRRVDSQIPIQNNFADRIVWLTNHLQDEEFEK 61
            C +C    ES+ HAL  CK +K I  +   R+D          D +  L+   Q  +FE 
Sbjct: 1031 CSLCTSNWESIGHALFSCKHAKDIWKLSRFRIDFSQAHNMFNGDYLYHLSTIYQQHDFET 1090

Query: 62   VCIVLWAIWNDRNDYTHNQEIMSWQRHCEWVIEYWEDMRGIVKANSEPIAQC-------- 121
            +  VLW IW DRN   H  +        ++  +++ED     K  + P+A          
Sbjct: 1091 LLCVLWGIWTDRNKVVHGGQPRHPTAIVQYASKFYEDFNK-AKLQNRPVAATSSHHSSPS 1150

Query: 122  ---------RWCPTVQAGEVALYTDGVVNPYVKGVGYGA---DNQ--LRGALELFDPISH 181
                     RW P V+ G   L  D   N   K +G GA   D Q  +  AL      S 
Sbjct: 1151 TSATDQHVQRWRPPVRNG-YKLNVDAATNIEQKKLGIGAILRDQQGTVLAALSKAVQGSF 1210

Query: 182  APLATEVNALIHGLRLLHRVHISKAMVCSDS---VNAIKMITGAVQITSDVHHWILQIRS 232
                 E  AL H +  + +       + +D+    NA+  +   +   SD+   I+ IR 
Sbjct: 1211 KSDEMEAKALFHAVNWVSQSQFPLTHIETDASRVSNALNRLNSDLSCFSDL---IMDIRC 1270

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022158377.18.9e-1826.56uncharacterized protein LOC111024874 [Momordica charantia][more]
TXG71533.11.6e-1126.38hypothetical protein EZV62_000112 [Acer yangbiense][more]
XP_022145060.11.6e-1127.03uncharacterized protein LOC111014578 [Momordica charantia][more]
XP_024956542.12.8e-1124.48uncharacterized protein LOC112498908 [Citrus sinensis][more]
XP_024178556.22.8e-1125.70uncharacterized protein LOC112184522 [Rosa chinensis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DX304.3e-1826.56uncharacterized protein LOC111024874 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
A0A5C7IQ657.8e-1226.38RNase H domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_000112 ... [more]
A0A6J1CTE37.8e-1227.03uncharacterized protein LOC111014578 OS=Momordica charantia OX=3673 GN=LOC111014... [more]
A0A803PJK43.9e-1124.29Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
A0A803P5M62.8e-0925.49Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002156Ribonuclease H domainPFAMPF13456RVT_3coord: 163..231
e-value: 2.1E-8
score: 34.0
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 121..231
e-value: 8.9E-9
score: 37.5
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 115..230

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0007903.1Lag0007903.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0004523 RNA-DNA hybrid ribonuclease activity