Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAATTCCAAACGCGTGCGATGTTCCATATTGATGACCGGTTCGGTTTGGTCCGGTTCAGTTCATCGATTCGGTTCGACTCCTTACACCCCTACGTGATATGGAATAATGAGTTGAATGTTAACATTTTCTCTTATTCTGCAGGGCATATTAATGTTATGATCAAGGCAACTTCGGAGGATTGTCGGTTCACGGGGTTTTATGGAAACCCAGCCACGACACTTCGGTCTGCATCGTGGCAATTGCTGGAGCGCCTGAGCTATTTGTCCCCTCTCCCATGGGTTGTGGGTGGGGACTTCAACGAAATACTTGCAGATTCTGAAAAGTCGGGTGGGGCTCCTAGGCCTCTTTTGCAAATGCAGGCTTTTAGGACGGCTATTGGTAACTCCCAACTTCTGGATCGGGTGAAGAACCAACGGGCAGGTAGCTCCACATGGATCCATCTGGATAGATTCCTTCTAAGTCATGTTGTGGTTTGCTTCTATAGGGACTTTTGTGTGGACCATTTGGGCTTGATGGAGGTGTCTGACCATCGCCCCATTCTAGCAAGTTGGGACAGAGGAAGAAGAGGTGCACCAGAGGGGAGATGCCTTCGACCTGTCAGATTTGAGGAAGGTTGGACTCGATTCCCGGAGTGTAAGGATATCATTAAGCAAATATGGCAAGCCACAGGGAGAGACAGATCCCTCTCACACCAGGCAAGAGTGCAGGCCTACTTGCGTGAGCTTCAGACATGGTCTCTTCATCGACATGGGTGATCTCTTTAGAGAACCATCAAGTGTAAAGAGAAGGAAATTTATATTTTGGAGTCTAGCAAGCCAGAAAACTGGGAGGCGAGTTGGGTTGCGGTTGAGAAGGATTTGGAGTCTTTATTGGTTGAAAATTAGGCATACTGGCGACAAAGGTCGAGAGAGGATTGGTTGGTGTGGGGGGGGGGACAGGGATTCTAAGTGGTTTCATACCTGAGCATCTCAACGGCATCAGTGAAAAAAAATTGAAGGCCTCGAGGATAGTGCAGGCCAATGGCAGTCAGATCCGAGTATGATAGAGACCATTGTTGTTGATTATTTTATTAATTTGTTTTCTTGGTCCTCCTCGCAAGTGGCAATTGATATTGTGTTGTGATGTGTAACTCCCTCGATTACTGATGTACAGAACCGAGCCTTACTTAGGGAGTTCACTCGGGTGGAGGTAGAGGCAGCTTTGAAAGGCATGAGCCTCACGAAAGCCCCAGGCCCCAATGGGGTTAATGCTTTGTTTTATCAACAACACTGGGACTTGATTAAGGATGAGACTTCTGCACTTTGCCTCAACATTCTGAATGGAGGGGACTCTGTCAAGGAATTGAATCATACATATCTAGTGTTGGTCCCAAAGATAACGGGTCGTAGGTCTGTTAAGGATTTTCGACCAATCAGCCTTTGTAGTGTTGTCTATAAAATTTGTGCCAATGCAATCACGAGACTAAAAGGAGTGCTACACTCTGTGGTTTCTACTGAGCAGTCGACCTTTGTGTCTGGGCGATTGATCTCAGACAATGTGATCATCAGGTTCGAGTGCTTGCATGCGCTTACTTGTAGAACGAGGGGAAGACTGGTAATATGGTGATGAAGTGGACATGAGTAAGGCCTATGATCAAGTGGAATGGGGCTTTCTAAGGTAGATGATGCTTCAGATGGGGTTTCAAACAAGATGGGTCGAGTTGGTGATGAGTTGTGTGGAGTTAGTTCGGTTCTCAGTTTTGCTGAATGGGAAGCCATCGTCAGAATTTCTGCCTTCCTGGGGGTTCGGCAGGGAGATCCTCTTTCTCCATATCTCTTTATTTTTGTGCGCAGGGTCTCTCTGCATTGCTTCATTATGAGATGTCTTGTCGAAATTATATGGGTTTACAAATTAATAAGTATTGTCCAGTAATTTCTCATCTTTTTTATGTTGATGATTGTCTTATCTTTTTTGTGCTATTAAGAGTGACTGCTTGACTATTAAATTCGTTTTACATATTTATGAGTTGGCTACTCGACAGGTTATTAATTATGATAAATCTATGTTCATGGTTAGCAGGAATACTAACCCAGACATGCAGCATTTCATTCGGAATACATTGGGGGTGCTTCAGACGCACTCACTTGGTCGATATTTGGGGCTCCCTTCACAGACTGCTTGGGCAAAGTGTGCAATCTTTCGATCGATTAGGGATCGAGTTTGGAAGGTTTTACGGGGATGGAAGGAAAAAATGTTTTTGGTGGGTGGAAAGGAGGTCCTCGTCAAGGCCGTTGCTCAGGCCATTCCCACCTACACGATGAGTTGTTTTAAGCTACCGGTTTCCCTATGTACTGAGATAAATGGGTTGTGTGCTAATTTTTATGGGGGTCAACGGATGCTGGGCAAAAGATCCATTGGCGTAGCTGGAACCGATTGTGTCGCCACAAGCTGTTGGGTGGCATGGGGTTTCGCGATTTATGCATTTTTAATCAGGCCATGCTGGCTAAGTAGTGCTAGTGTCTATCCCAGGACCAGTCTAGCCTTCTATATAGAGTTTTGCGAGGGAGGTACTTTCGTACAGGTTCTTTTCTTCGAGCGACATTGGGGGCGGGAAGTGTTTAGACGAGGTATTAGGTGGCGGGTTGGATCCTGA
mRNA sequence
ATGAAATTCCAAACGCGTGCGATGTTCCATATTGATGACCGGTTCGGTTTGGTCCGGTTCAGTTCATCGATTCGGTTCGACTCCTTACACCCCTACGTGATATGGAATAATGAGTTGAATGTTAACATTTTCTCTTATTCTGCAGGGCATATTAATGTTATGATCAAGGCAACTTCGGAGGATTGTCGGTTCACGGGGTTTTATGGAAACCCAGCCACGACACTTCGGTCTGCATCGTGGCAATTGCTGGAGCGCCTGAGCTATTTGTCCCCTCTCCCATGGGTTGTGGGTGGGGACTTCAACGAAATACTTGCAGATTCTGAAAAGTCGGGTGGGGCTCCTAGGCCTCTTTTGCAAATGCAGGCTTTTAGGACGGCTATTGGTAACTCCCAACTTCTGGATCGGGTGAAGAACCAACGGGCAGGTAGCTCCACATGGATCCATCTGGATAGATTCCTTCTAAGTCATGTTGTGGTTTGCTTCTATAGGGACTTTTGTGTGGACCATTTGGGCTTGATGGAGGTGTCTGACCATCGCCCCATTCTAGCAAGTTGGGACAGAGGAAGAAGAGGTGCACCAGAGGGGAGATGCCTTCGACCTGTCAGATTTGAGGAAGGTTGGACTCGATTCCCGGAGTGTAAGGATATCATTAAGCAAATATGGCAAGCCACAGGGAGAGACAGATCCCTCTCACACCAGGCAAGAGTGCAGGCCTACTTGCGCATACTGGCGACAAAGGTCGAGAGAGGATTGGTTGGTGTGGGGGGGGGGACAGGGATTCTAAGTGGTTTCATACCTGAGCATCTCAACGGCATCAGTGAAAAAAAATTGAAGGCCTCGAGGATAGTGCAGGCCAATGGCAGTCAGATCCGAAACCGAGCCTTACTTAGGGAGTTCACTCGGGTGGAGGTAGAGGCAGCTTTGAAAGGCATGAGCCTCACGAAAGCCCCAGGCCCCAATGGGGTTAATGCTTTGTTTTATCAACAACACTGGGACTTGATTAAGGATGAGACTTCTGCACTTTGCCTCAACATTCTGAATGGAGGGGACTCTGTCAAGGAATTGAATCATACATATCTAGTGTTGGTCCCAAAGATAACGGGTCGTAGGTCTGTTAAGGATTTTCGACCAATCAGCCTTTGTAGTGTTGTCTATAAAATTTGTGCCAATGCAATCACGAGACTAAAAGGAGTGCTACACTCTGTGGTTTCTACTGAGCAGTCGACCTTTGTGTCTGGGCGATTGATCTCAGACAATGTGATCATCAGTGGAATGGGGCTTTCTAAGGTAGATGATGCTTCAGATGGGGTTTCAAACAAGATGGGTCGAGTTGGTGATGAGTTGTGTGGAGTTAGTTCGGTTCTCAGTTTTGCTGAATGGGAAGCCATCGTCAGAATTTCTGCCTTCCTGGGGGTTCGGCAGGGAGATCCTCTTTCTCCATATCTCTTTATTTTTGTGCGCAGGGTTATTAATTATGATAAATCTATGTTCATGGTTAGCAGGAATACTAACCCAGACATGCAGCATTTCATTCGGAATACATTGGGGGTGCTTCAGACGCACTCACTTGGTCGATATTTGGGGCTCCCTTCACAGACTGCTTGGGCAAAGTGTGCAATCTTTCGATCGATTAGGGATCGAGTTTGGAAGGTTTTACGGGGATGGAAGGAAAAAATGTTTTTGGTGGGTGGAAAGGAGGTCCTCGTCAAGGCCGTTGCTCAGGCCATTCCCACCTACACGATGAGTTGTTTTAAGCTACCGGTTTCCCTATGTACTGAGATAAATGGGTTGTGTGCTAATTTTTATGGGGGTCAACGGATGCTGGGCAAAAGATCCATTGGCGTAGCTGGAACCGATTGTGTCGCCACAAGCTGTTGGGTGGCATGGGGTTTCGCGATTTATGCATTTTTAATCAGGCCATGCTGGCTAAGTAGTGCTAGTGTCTATCCCAGGACCAGTCTAGCCTTCTATATAGAGTTTTGCGAGGGAGGTACTTTCGTACAGGTTCTTTTCTTCGAGCGACATTGGGGGCGGGAAGTGTTTAGACGAGGTATTAGGTGGCGGGTTGGATCCTGA
Coding sequence (CDS)
ATGAAATTCCAAACGCGTGCGATGTTCCATATTGATGACCGGTTCGGTTTGGTCCGGTTCAGTTCATCGATTCGGTTCGACTCCTTACACCCCTACGTGATATGGAATAATGAGTTGAATGTTAACATTTTCTCTTATTCTGCAGGGCATATTAATGTTATGATCAAGGCAACTTCGGAGGATTGTCGGTTCACGGGGTTTTATGGAAACCCAGCCACGACACTTCGGTCTGCATCGTGGCAATTGCTGGAGCGCCTGAGCTATTTGTCCCCTCTCCCATGGGTTGTGGGTGGGGACTTCAACGAAATACTTGCAGATTCTGAAAAGTCGGGTGGGGCTCCTAGGCCTCTTTTGCAAATGCAGGCTTTTAGGACGGCTATTGGTAACTCCCAACTTCTGGATCGGGTGAAGAACCAACGGGCAGGTAGCTCCACATGGATCCATCTGGATAGATTCCTTCTAAGTCATGTTGTGGTTTGCTTCTATAGGGACTTTTGTGTGGACCATTTGGGCTTGATGGAGGTGTCTGACCATCGCCCCATTCTAGCAAGTTGGGACAGAGGAAGAAGAGGTGCACCAGAGGGGAGATGCCTTCGACCTGTCAGATTTGAGGAAGGTTGGACTCGATTCCCGGAGTGTAAGGATATCATTAAGCAAATATGGCAAGCCACAGGGAGAGACAGATCCCTCTCACACCAGGCAAGAGTGCAGGCCTACTTGCGCATACTGGCGACAAAGGTCGAGAGAGGATTGGTTGGTGTGGGGGGGGGGACAGGGATTCTAAGTGGTTTCATACCTGAGCATCTCAACGGCATCAGTGAAAAAAAATTGAAGGCCTCGAGGATAGTGCAGGCCAATGGCAGTCAGATCCGAAACCGAGCCTTACTTAGGGAGTTCACTCGGGTGGAGGTAGAGGCAGCTTTGAAAGGCATGAGCCTCACGAAAGCCCCAGGCCCCAATGGGGTTAATGCTTTGTTTTATCAACAACACTGGGACTTGATTAAGGATGAGACTTCTGCACTTTGCCTCAACATTCTGAATGGAGGGGACTCTGTCAAGGAATTGAATCATACATATCTAGTGTTGGTCCCAAAGATAACGGGTCGTAGGTCTGTTAAGGATTTTCGACCAATCAGCCTTTGTAGTGTTGTCTATAAAATTTGTGCCAATGCAATCACGAGACTAAAAGGAGTGCTACACTCTGTGGTTTCTACTGAGCAGTCGACCTTTGTGTCTGGGCGATTGATCTCAGACAATGTGATCATCAGTGGAATGGGGCTTTCTAAGGTAGATGATGCTTCAGATGGGGTTTCAAACAAGATGGGTCGAGTTGGTGATGAGTTGTGTGGAGTTAGTTCGGTTCTCAGTTTTGCTGAATGGGAAGCCATCGTCAGAATTTCTGCCTTCCTGGGGGTTCGGCAGGGAGATCCTCTTTCTCCATATCTCTTTATTTTTGTGCGCAGGGTTATTAATTATGATAAATCTATGTTCATGGTTAGCAGGAATACTAACCCAGACATGCAGCATTTCATTCGGAATACATTGGGGGTGCTTCAGACGCACTCACTTGGTCGATATTTGGGGCTCCCTTCACAGACTGCTTGGGCAAAGTGTGCAATCTTTCGATCGATTAGGGATCGAGTTTGGAAGGTTTTACGGGGATGGAAGGAAAAAATGTTTTTGGTGGGTGGAAAGGAGGTCCTCGTCAAGGCCGTTGCTCAGGCCATTCCCACCTACACGATGAGTTGTTTTAAGCTACCGGTTTCCCTATGTACTGAGATAAATGGGTTGTGTGCTAATTTTTATGGGGGTCAACGGATGCTGGGCAAAAGATCCATTGGCGTAGCTGGAACCGATTGTGTCGCCACAAGCTGTTGGGTGGCATGGGGTTTCGCGATTTATGCATTTTTAATCAGGCCATGCTGGCTAAGTAGTGCTAGTGTCTATCCCAGGACCAGTCTAGCCTTCTATATAGAGTTTTGCGAGGGAGGTACTTTCGTACAGGTTCTTTTCTTCGAGCGACATTGGGGGCGGGAAGTGTTTAGACGAGGTATTAGGTGGCGGGTTGGATCCTGA
Protein sequence
MKFQTRAMFHIDDRFGLVRFSSSIRFDSLHPYVIWNNELNVNIFSYSAGHINVMIKATSEDCRFTGFYGNPATTLRSASWQLLERLSYLSPLPWVVGGDFNEILADSEKSGGAPRPLLQMQAFRTAIGNSQLLDRVKNQRAGSSTWIHLDRFLLSHVVVCFYRDFCVDHLGLMEVSDHRPILASWDRGRRGAPEGRCLRPVRFEEGWTRFPECKDIIKQIWQATGRDRSLSHQARVQAYLRILATKVERGLVGVGGGTGILSGFIPEHLNGISEKKLKASRIVQANGSQIRNRALLREFTRVEVEAALKGMSLTKAPGPNGVNALFYQQHWDLIKDETSALCLNILNGGDSVKELNHTYLVLVPKITGRRSVKDFRPISLCSVVYKICANAITRLKGVLHSVVSTEQSTFVSGRLISDNVIISGMGLSKVDDASDGVSNKMGRVGDELCGVSSVLSFAEWEAIVRISAFLGVRQGDPLSPYLFIFVRRVINYDKSMFMVSRNTNPDMQHFIRNTLGVLQTHSLGRYLGLPSQTAWAKCAIFRSIRDRVWKVLRGWKEKMFLVGGKEVLVKAVAQAIPTYTMSCFKLPVSLCTEINGLCANFYGGQRMLGKRSIGVAGTDCVATSCWVAWGFAIYAFLIRPCWLSSASVYPRTSLAFYIEFCEGGTFVQVLFFERHWGREVFRRGIRWRVGS
Homology
BLAST of Lag0007894 vs. NCBI nr
Match:
VVA32947.1 (PREDICTED: retrotransposon [Prunus dulcis])
HSP 1 Score: 312.8 bits (800), Expect = 7.6e-81
Identity = 255/835 (30.54%), Postives = 367/835 (43.95%), Query Frame = 0
Query: 33 VIWNNELNVNIFSYSAGHINVMIKATSEDCRF--TGFYGNPATTLRSASWQLLERLSYLS 92
+ W + + + SYS GHI+V+I S D +F TGFYG+P T R+ SW++L RLS+
Sbjct: 32 LFWRSGWGLRLLSYSVGHIHVLI-TESNDSQFYLTGFYGHPDTQQRNHSWEVLRRLSHTV 91
Query: 93 PLPWVVGGDFNEILADSEKSGGAPRPLLQMQAFRTAIGNSQLLDR---------VKNQRA 152
WVV GDFNEIL +K GG RP QM F+ A+ + +L +
Sbjct: 92 QGAWVVVGDFNEILFSKDKRGGRERPQRQMNNFKMALEDCRLSSTRFTGYPFTWARRYPD 151
Query: 153 GSSTWIHLDRFLLSHVVVCFYRDFCVDHLGLMEVSDHRPILASWDRGRRGAPEGRCLRPV 212
GS LDR + + V Y HL L SDH PIL PE R
Sbjct: 152 GSVVEERLDRCVANGVFFGRYSHLTTSHL-LAVGSDHYPILV---EACADDPEASAKRST 211
Query: 213 R--FEEGWTRFPECKDIIKQIWQATGRDRSLS----------------HQARVQAYLRIL 272
R FEE WT+ P+ +I++ W+ T +S+S H + V+ L+
Sbjct: 212 RFHFEEMWTKEPDFNKVIEEAWKVTDGVKSVSNSLSLCAKELKTWNHIHFSNVRNQLKHA 271
Query: 273 ATKVERGLVGVGGGTGILSGFIPEHLNGISEKK----LKASRIVQANGSQI--------- 332
++ + +L + E ++ + EK+ + SR+ Q +I
Sbjct: 272 YKELTALQGRLTTDQHVLKAKVEETISDLLEKQEIMWRQRSRVWQTEEQRIGDLFCDYFK 331
Query: 333 -------------------------RNRALLREFTRVEVEAALKGMSLTKAPGPNGVNAL 392
N LL+ FTR E+E L M TKAPG +G+ AL
Sbjct: 332 TLFSSTGGQQMERILNEVRPVITSAMNDRLLQAFTREELEHTLFQMFPTKAPGHDGMPAL 391
Query: 393 FYQQHWDLIKDETSALCLNILNGGDSVKELNHTYLVLVPKITGRRSVKDFRPISLCSVVY 452
F+Q++W ++ D+ + CL ILNG SV+E NHT + L+PK+ +V +FRPISLC+ VY
Sbjct: 392 FFQKYWHIVGDKVAKKCLQILNGEGSVREFNHTLIALIPKVKMPTTVSEFRPISLCTTVY 451
Query: 453 KICANAI-TRLKGVLHSVVSTEQSTFVSGRLISDNVIISG------MGLSKVDDASDGVS 512
K+ A I RLK VL V++ QS FV R+I DNV+ + G+ K D +
Sbjct: 452 KMIAKTIANRLKTVLPHVITENQSAFVPNRMILDNVMAAFEIMHTIKGVKKGRDVKMALK 511
Query: 513 NKMGRVGDE-----LCGVSSVLSF-AEWEAIV-------------------RISAFLGVR 572
M + D L + L F A W A V I G+R
Sbjct: 512 LDMAKAYDRVEWVFLREMMLKLGFSATWVAKVMDCISTTTFSMLWKGNPVGHIMPQRGLR 571
Query: 573 QGDPLSPYLF------------------------------------------IFVR---- 632
QG PLSPYLF +F++
Sbjct: 572 QGCPLSPYLFLMCTEGFSCLLRGAERRGDLVGVQVARGGPSVTHLLFADDSILFMKATNE 631
Query: 633 -----------------RVINYDKSMFMVSRNTNPDMQHFIRNTLGVLQTHSLGRYLGLP 692
+ INY KS F +S N I+ L V +YLGLP
Sbjct: 632 ACRALETLFQTYEEVSGQQINYSKSAFSLSPNATRADFDMIKGVLNVPVVQCHEKYLGLP 691
BLAST of Lag0007894 vs. NCBI nr
Match:
XP_030969743.1 (uncharacterized protein LOC115990020 [Quercus lobata])
HSP 1 Score: 304.3 bits (778), Expect = 2.7e-78
Identity = 225/770 (29.22%), Postives = 333/770 (43.25%), Query Frame = 0
Query: 33 VIWNNELNVNIFSYSAGHINVMIKATSEDC-RFTGFYGNPATTLRSASWQLLERLSYLSP 92
++W N++ + + S+S HI+ ++ SE+ R TGFYG P T+ R W +L LS
Sbjct: 243 LLWKNDVTIWVDSFSKYHIDAIVNGGSENAWRLTGFYGEPETSRRHEGWAMLRMLSSKPK 302
Query: 93 LPWVVGGDFNEILADSEKSGGAPRPLLQMQAFRTAIGNSQLLD--------RVKNQRAGS 152
L W GDFNE+L S+K+GG PR QMQ+FR A+ + +D +R G
Sbjct: 303 LHWCCIGDFNELLEVSDKNGGVPRSHTQMQSFRDALDSCGFVDLGFSGPEFTWHGRRRGE 362
Query: 153 STWIHLDRFLLSHVVVCFYRDFCVDHLGLMEVSDHRPILASWDRGRRGAPEGRCLRPVRF 212
W LDR + ++ + + V HL SDHRP+L S D G + +P RF
Sbjct: 363 RIWERLDRGVANYEWMARFPTGRVQHLNCY-TSDHRPLLLSLD--SNGKRQRWRRKPFRF 422
Query: 213 EEGWTRFPECKDIIKQIWQATGRDRSLSHQ-------------------ARVQAYLRILA 272
E W P CK + + W R + + V+ ++++
Sbjct: 423 ESMWVSNPGCKVTVAEAWAGPRRGTPMLNATTKIKECKKRLKRWSKETFGNVKEQIKVVK 482
Query: 273 TK--------VERGLVGV---------------------------------------GGG 332
K V+RG G G
Sbjct: 483 EKLWVAEIESVQRGDQGTVDNLKAELHGLLEKEEKMWHQRSRVQWLQCGDQNTRFFHGAA 542
Query: 333 T-----GILSGFIPEH-------------LNGISEKKLKAS------RI---VQANGSQI 392
T + G E+ L EK K+S R+ VQ +
Sbjct: 543 TCRKRQNFIKGLRDENGVWQSEEQSFSGLLTDFYEKLFKSSNPQNIDRVVDGVQKVVTNS 602
Query: 393 RNRALLREFTRVEVEAALKGMSLTKAPGPNGVNALFYQQHWDLIKDETSALCLNILNGGD 452
N L + ++ EVE A+K M+ KAPGP+G+ LFYQ +W + + + L+ LN G
Sbjct: 603 MNADLAKPYSADEVERAIKDMAPLKAPGPDGMPPLFYQTYWSDVSMDITQAVLSCLNSGS 662
Query: 453 SVKELNHTYLVLVPKITGRRSVKDFRPISLCSVVYKICANAI-TRLKGVLHSVVSTEQST 512
+K +NHT++ L+PK+ V +FRPISLC+V+YKI + AI RLK +L+S++S QS
Sbjct: 663 ILKSINHTFITLIPKVKNPEKVTEFRPISLCNVLYKIVSKAIANRLKPLLNSIISDTQSA 722
Query: 513 FVSGRLISDNVIISGMGLSKVDDASDGVSNKMGRVGDELCGVSSV-----------LSFA 572
F++ RLI+DNV+I+ L + + G + M D V L F
Sbjct: 723 FIADRLITDNVLIAFESLHHMKNNCTGKTGFMALKLDMSKAYDRVEWSFLEKVLLKLGFQ 782
Query: 573 E-WEAIVR-------------------ISAFLGVRQGDPLSPYLFIFVR----------- 606
E W +++ I+ G+RQGDPLSPYLF+F
Sbjct: 783 ESWVSLIMECITTVTYSILVNGEPKGLITPARGLRQGDPLSPYLFLFCAEGLNAIFQKAA 842
BLAST of Lag0007894 vs. NCBI nr
Match:
ONI09819.1 (hypothetical protein PRUPE_4G011200 [Prunus persica])
HSP 1 Score: 303.1 bits (775), Expect = 6.0e-78
Identity = 261/870 (30.00%), Postives = 369/870 (42.41%), Query Frame = 0
Query: 33 VIWNNELNVNIFSYSAGHINVMIKATSEDCRF--TGFYGNPATTLRSASWQLLERLSYLS 92
+ W + V + SYS GHI+V+I S D +F TGFYG+P T R+ SW+LL RLSY
Sbjct: 18 LFWRSGWGVRLLSYSVGHIHVLI-TESNDSQFYLTGFYGHPDTQQRNHSWELLRRLSYTV 77
Query: 93 PLPWVVGGDFNEILADSEKSGGAPRPLLQMQAFRTAIGNSQLLDR---------VKNQRA 152
WVV GDFNEIL +K GG RP QM F+ A+ + +L +
Sbjct: 78 QGAWVVVGDFNEILFSKDKRGGRERPQGQMNNFKMALEDCRLSSTRFTGYPFTWARRYPD 137
Query: 153 GSSTWIHLDRFLLSHVVVCFYRDFCVDHLGLMEVSDHRPIL--ASWDRGRRGAPEGRCLR 212
GS LDR + + V Y HL + SDH PIL A D GA R
Sbjct: 138 GSVVEERLDRCVANGVFFGRYSHLTTSHL-VAVGSDHYPILVEACVDDPEAGAKRS---R 197
Query: 213 PVRFEEGWTRFPECKDIIKQIWQATGRDRSLSHQARVQA------------YLRILATKV 272
FEE WT+ PE +I++ W+ T S+S+ + A +R T
Sbjct: 198 RFHFEEMWTKEPEFNKVIEEAWKVTDGVESVSNSLSLCAKELKTWNHIHFGNVRKQLTHA 257
Query: 273 ERGLVGVGG----GTGILSGFIPEHLNGISEKK----LKASRIV--------------QA 332
+ L + G +L + E ++ + EK+ + SR+V +A
Sbjct: 258 YKELTALQGRLTTDQHVLKAKVEETISDLLEKQEIMWRQRSRVVWLKEGDKNTHFFHGRA 317
Query: 333 NGSQIRNRA--------------------------------------------------- 392
+ RNR
Sbjct: 318 SSRSKRNRVCGIFDANQAWQTEEQRIGDLFCDYFKTLFSSSGGQQMERILNEVRPVITSA 377
Query: 393 ----LLREFTRVEVEAALKGMSLTKAPGPNGVNALFYQQHWDLIKDETSALCLNILNGGD 452
LL+ FTR E+E L M TKAPG +G+ ALF+Q++W ++ D+ + CL ILNG
Sbjct: 378 MNDRLLQAFTREELEHTLFQMFPTKAPGHDGMPALFFQKYWHIVGDKVAKKCLQILNGEG 437
Query: 453 SVKELNHTYLVLVPKITGRRSVKDFRPISLCSVVYKICANAI-TRLKGVLHSVVSTEQST 512
SV+E NHT + L+PK+ +V +FRPISLC+ VYK+ A I RLK VL V++ QS
Sbjct: 438 SVREFNHTLIALIPKVKMPTTVSEFRPISLCTTVYKMIAKTIANRLKTVLPHVITETQSA 497
Query: 513 FVSGRLISDNVI--------ISG------------MGLSKVDDASDGVSNK--MGRVGDE 572
FV R+I DNV+ I G + ++K D + V + M ++G
Sbjct: 498 FVPNRMILDNVMAAFEIMNTIKGVKKRRDVQMALKLDMAKAYDRVEWVFLRAMMLKLGFS 557
Query: 573 LCGVSSVLSFAE-------WEA--IVRISAFLGVRQGDPLSPYLFIF------------- 632
VS V+ W+ + I G+RQG PLSPYLF+
Sbjct: 558 ATWVSKVMDCISTTTFSVLWKGTPVGHIMPQRGLRQGCPLSPYLFLICTEGFSCLLHGAE 617
Query: 633 --------------------------------------------------VRRVINYDKS 692
+ INY KS
Sbjct: 618 RRGDLVGVQVARGAPSVTHLLFADDSILFMKATNKACMALETLFQTYEEVTGQQINYSKS 677
BLAST of Lag0007894 vs. NCBI nr
Match:
XP_030963604.1 (uncharacterized protein LOC115984727 [Quercus lobata])
HSP 1 Score: 294.3 bits (752), Expect = 2.8e-75
Identity = 224/716 (31.28%), Postives = 316/716 (44.13%), Query Frame = 0
Query: 33 VIWNNELNVNIFSYSAGHIN-VMIKATSEDCRFTGFYGNPATTLRSASWQLLERLSYLSP 92
+ W + N+ + S S HI+ V+ + T + RFTGFYG P T LRSASW LL L
Sbjct: 67 LFWKKDFNLWVVSASINHIDAVIFEGTDKAWRFTGFYGAPETHLRSASWNLLRTLHNQLD 126
Query: 93 LPWVVGGDFNEILADSEKSGGAPRPLLQMQAFRTAIGNSQLLDR---------VKNQRAG 152
LPW+ GGDFNE+L EK GG P P QMQ FR + +L+D KN +G
Sbjct: 127 LPWLCGGDFNELLKSHEKRGGRPHPYGQMQKFREVLDECRLMDLGFIGKKFTWFKNYPSG 186
Query: 153 SSTWIHLDRFL-LSHVVVCF----YRDFCVDHLGLMEVSDHRPILASWDRGRRGAPEG-- 212
W LDR + + + CF R F SDH PI PEG
Sbjct: 187 -GLWERLDRAISTAEWLDCFPATKVRSFVCGQ------SDHSPIFI--------LPEGIL 246
Query: 213 -RCLRPVRFEEGWTRFPECKDIIKQIWQATGRD----------------------RSLSH 272
+ RP RFE+ W C D + + W A D S+ +
Sbjct: 247 VKPQRPWRFEQFWLEKEGCHDTVARSWVAIQSDSPVASVVGNIDRCQVKLKKWSKNSVGN 306
Query: 273 QARVQAYLRILATKVERGLVGVGGGT-----------------------------GILSG 332
AR + + +K E +V + GG+ +LSG
Sbjct: 307 IARTLVDKKKMLSKAE--VVAIQGGSVDFFLQLKFEVNEFLRMEEQMWQQRSRTHWLLSG 366
Query: 333 ------------------------------------------------FIPEHLNGISEK 392
F + +G+
Sbjct: 367 DSNTKYFHNRASHRFRRNSISELRDSHGVLFSGEENVSAMIVDFYTKLFSSSNPSGLETV 426
Query: 393 KLKASRIVQANGSQIRNRALLREFTRVEVEAALKGMSLTKAPGPNGVNALFYQQHWDLIK 452
R+V A+ N L+ EFTR+EVE ALK M+ KAPGPNG+ +F+Q +WD I
Sbjct: 427 VQHTKRVVSAD----MNVGLIEEFTRLEVETALKQMAPLKAPGPNGMPPIFFQHYWDSIG 486
Query: 453 DETSALCLNILNGGDSVKELNHTYLVLVPKITGRRSVKDFRPISLCSVVYKICANAI-TR 512
D+ + L LN D + LNHT++ L+PK+ + +F PI+LC+V+YK+ + + R
Sbjct: 487 DDVVKVVLFCLNTSDVLPGLNHTFITLIPKVKSPELIYEFLPIALCNVLYKLVSKVLANR 546
Query: 513 LKGVLHSVVSTEQSTFVSGRLISDNVIISGMGLSKVDDASDGVSNKMGRVGDELCGVSSV 572
LK VL ++S QS F + ISDN++++ L + G K+G V +L +S
Sbjct: 547 LKRVLPQIISESQSAFQLDKAISDNILVAFETLHHMKMKKVG---KVGHVAIKL-DMSKA 606
Query: 573 LSFAEWEAIVRISAFLG-------------------VRQGD--PLSPYLFIFVR---RVI 607
EWE + +I +G R GD + L ++ + ++I
Sbjct: 607 YDRLEWEFLKKIMEKMGFHPTWVGWIMEYDSLLFCRARLGDVVAIQALLGLYEKASGQMI 666
BLAST of Lag0007894 vs. NCBI nr
Match:
XP_023899813.1 (uncharacterized protein LOC112011695 [Quercus suber])
HSP 1 Score: 294.3 bits (752), Expect = 2.8e-75
Identity = 205/644 (31.83%), Postives = 298/644 (46.27%), Query Frame = 0
Query: 33 VIWNNELNVNIFSYSAGHINVMIKATSED--CRFTGFYGNPATTLRSASWQLLERLSYLS 92
++W + V++ +YS HI+ ++ + TGFYGNP TT R SW L+ L S
Sbjct: 18 MLWKEGIKVDVKTYSQDHIDAWVEGGWDGGCWHLTGFYGNPDTTKRPESWAKLKHLKGTS 77
Query: 93 PLPWVVGGDFNEILADSEKSGGAPRPLLQMQAFRTAIGNSQLLDR---------VKNQRA 152
LPW+ GDFNEI+ +EK GG RP QM+ F AI + D + +
Sbjct: 78 SLPWLAIGDFNEIIGLTEKEGGRTRPRSQMENFIGAINHCGFRDMGYIGPKYTWLYQKSD 137
Query: 153 GSSTWIHLDRFLLSHVVVCFYRDFCVDHLGLMEVSDHRPILASWDRGRRGAPEGRCLRPV 212
G+ LDR L + + + V HL L SDH P+ + ++ + +
Sbjct: 138 GTQIRERLDRALATKEWMKLFPTAKVYHLSL-SASDHSPLSLHLVQKKK---RKKTKQTF 197
Query: 213 RFEEGWTRFPECKDIIKQIWQATGRDRSLSHQAR-----VQAYLR--------------- 272
+FE W + C+++++ W+ H R + +L+
Sbjct: 198 KFESMWLKDDRCEEVVRAAWEEGATTPESIHVLRNTRTELNCWLKKEDEMWRQRSRLNWF 257
Query: 273 ---ILATKVERGLVGVGGGTGILSGFIPEHLNGISEKKLKASR---------IVQANGSQ 332
T + G E + K +SR +Q S
Sbjct: 258 REGDRNTSFFHAKASARYKKNYIEGLFDEVVVDFYSKLFTSSRPDNFTELLDSIQPKVST 317
Query: 333 IRNRALLREFTRVEVEAALKGMSLTKAPGPNGVNALFYQQHWDLIKDETSALCLNILNGG 392
N L R FT EV ALK M KAPGP+G+ +F+QQ W + + L+ LN G
Sbjct: 318 TMNNELTRNFTAQEVRVALKQMYPLKAPGPDGMPPIFFQQFWSTCGEVVTTTVLDFLNHG 377
Query: 393 DSVKELNHTYLVLVPKITGRRSVKDFRPISLCSVVYKICANAI-TRLKGVLHSVVSTEQS 452
S N T++VL+PKI ++V DFRPISLC+V YKI + AI RLK L S++S QS
Sbjct: 378 MSPPNFNETHIVLIPKIKEPKTVSDFRPISLCNVTYKIASKAIENRLKKFLLSIISETQS 437
Query: 453 TFVSGRLISDNVIISGMGLSKVDDASDGVSNKMGRVGDELCGVSSVLSFAEWEAIVRISA 512
FV GRLI+DNV+++ + + G +M V ++ G+S+++ + W+ R+
Sbjct: 438 AFVHGRLITDNVLVAFETMHHISRKKGGGVGEMA-VKLDMKGLSAMIKASVWKG--RMEG 497
Query: 513 FLGVRQGDPLSPYLF-----IFVR---------------------RVINYDKSMFMVSRN 572
R G LS F IF + + +N K+ S N
Sbjct: 498 IKICRGGPKLSHLFFADDSLIFCKASIAKCEALQGVLEAYEKASGQQLNRAKTSLFFSNN 557
Query: 573 TNPDMQHFIRNTLGVLQTHSLGRYLGLPSQTAWAKCAIFRSIRDRVWKVLRGWKEKMFLV 607
T ++Q I+ G +YLGLPS K F I+++V + L GWKEK+
Sbjct: 558 TPKEIQEEIKGRFGAQVIKQHEKYLGLPSLVGRNKRNTFNDIKEKVGRTLAGWKEKLLSK 617
BLAST of Lag0007894 vs. ExPASy Swiss-Prot
Match:
P14381 (Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1)
HSP 1 Score: 76.3 bits (186), Expect = 1.6e-12
Identity = 49/136 (36.03%), Postives = 69/136 (50.74%), Query Frame = 0
Query: 288 SQIRNRALLREFTRVEVEAALKGMSLTKAPGPNGVNALFYQQHWDLIKDETSALCLNILN 347
S+ R L T E+ AL+ M K+PG +G+ F+Q WD + + +
Sbjct: 438 SERRKERLETPITLDELSQALRLMPHNKSPGLDGLTIEFFQFFWDTLGPDFHRVLTEAFK 497
Query: 348 GGDSVKELNHTYLVLVPKITGRRSVKDFRPISLCSVVYKICANAIT-RLKGVLHSVVSTE 407
G+ L L+PK R +K++RP+SL S YKI A AI+ RLK VL V+ +
Sbjct: 498 KGELPLSCRRAVLSLLPKKGDLRLIKNWRPVSLLSTDYKIVAKAISLRLKSVLAEVIHPD 557
Query: 408 QSTFVSGRLISDNVII 423
QS V GR I DNV +
Sbjct: 558 QSYTVPGRTIFDNVFL 573
BLAST of Lag0007894 vs. ExPASy TrEMBL
Match:
A0A2N9HTH6 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS42962 PE=4 SV=1)
HSP 1 Score: 333.6 bits (854), Expect = 2.0e-87
Identity = 239/802 (29.80%), Postives = 364/802 (45.39%), Query Frame = 0
Query: 33 VIWNNELNVNIFSYSAGHI--NVMIKATSEDCRFTGFYGNPATTLRSASWQLLERLSYLS 92
+ WN+E+ + + +YS HI NV++ + ++ RFTGFYGNP T R SW LL+ L +L
Sbjct: 437 LFWNDEVELRVTTYSKNHIDSNVVVMDSRKEFRFTGFYGNPETHKRKESWALLKHLRHLG 496
Query: 93 PLPWVVGGDFNEILADSEKSGGAPRPLLQMQAFRTAIGNSQLLDR---------VKNQRA 152
PW+ GDFNE+L +EK G RP Q++ FR A+ QL D K +R
Sbjct: 497 TAPWLCAGDFNELLDQNEKFGIGQRPDWQIRDFREAVEVCQLHDLGFVGNKFTWFKGRRQ 556
Query: 153 GSSTWIHLDRFLLSHVVVCFYRDFCVDHLGLMEVSDHRPILASWDRGRRGAPEGRCLRPV 212
+ LDR L S + Y V HL + SDH P+L R +
Sbjct: 557 AVTAAERLDRMLASVSWITEYEGAVVTHLPNLS-SDHCPLLLEIPFANAMI---RRKKLF 616
Query: 213 RFEEGWTRFPECKDIIKQIWQATGRDRSLSHQARVQ------AYLRILATKVERGLVGVG 272
FE W + +CK +I+ W +D SL + + A + TK +
Sbjct: 617 HFEALWVKDEQCKSVIENAWGTEVQDGSLMFRVFEKLKSCRGALIAWSCTKFGNFASRIK 676
Query: 273 GGTGILSGFIPEHLNGISE-------KKLKAS---------RIVQANGSQI---RNRALL 332
+L + E +G S+ KK+ S + + G + N L+
Sbjct: 677 AKREMLQRLVQEDPSGRSQEVAEEYFKKIFTSNQPDNEVINKCLNGMGGMVTEAMNTELV 736
Query: 333 REFTRVEVEAALKGMSLTKAPGPNGVNALFYQQHWDLIKDETSALCLNILNGGDSVKELN 392
+FT EV ALK M TKAPGP+G++A+FYQ +W+++ E + L+IL+ G ++++N
Sbjct: 737 ADFTTEEVHKALKQMYPTKAPGPDGMSAIFYQSYWEIVGPEVTQAILSILHSGFMLRKIN 796
Query: 393 HTYLVLVPKITGRRSVKDFRPISLCSVVYKICANAI-TRLKGVLHSVVSTEQSTFVSGRL 452
T++VL+PKI + D+RPI+LC+V+YKI + + RLK VL V+S QS FV GRL
Sbjct: 797 FTHIVLIPKIKEPVKITDYRPIALCNVIYKIVSKILANRLKKVLPHVISNTQSAFVPGRL 856
Query: 453 ISDNVIIS--------------------GMGLSKVDDA-----SDGVSNKMGRVGDELCG 512
I+DNV+++ + +SK D + V ++G V + +
Sbjct: 857 ITDNVLVAFEILHSMSIKNRGKRGQMALKLDMSKAYDRVEWGFVEAVMRRLGFVEEWIRL 916
Query: 513 VSSVLSFAEWEAIV------RISAFLGVRQGDPLSPYLFIFV--------------RRV- 572
+ LS + ++ +A G+RQGDPLSPY+F+ R++
Sbjct: 917 IMMCLSTVSYSILLNGVQSGNFTASRGIRQGDPLSPYIFLLCAEGLSSLLKEFERERKIT 976
Query: 573 ------------------------------------------------INYDKSMFMVSR 632
+N K+ ++
Sbjct: 977 GITASRGGPRLTHLFFANDSILFCQASSENCRALCEILQIYEEASGQQLNRSKTSLFFTK 1036
Query: 633 NTNPDMQHFIRNTLGVLQTHSLGRYLGLPSQTAWAKCAIFRSIRDRVWKVLRGWKEKMFL 691
NT+ M+ +I+N VL+ S +YLGLPS +K A F I+DRVW+ + GWKEK+
Sbjct: 1037 NTSATMKQYIKNLFHVLEIKSHEKYLGLPSFIGRSKKAAFNGIKDRVWQKINGWKEKLLS 1096
BLAST of Lag0007894 vs. ExPASy TrEMBL
Match:
A0A5E4FZN9 (PREDICTED: retrotransposon OS=Prunus dulcis OX=3755 GN=ALMOND_2B007697 PE=4 SV=1)
HSP 1 Score: 312.8 bits (800), Expect = 3.7e-81
Identity = 255/835 (30.54%), Postives = 367/835 (43.95%), Query Frame = 0
Query: 33 VIWNNELNVNIFSYSAGHINVMIKATSEDCRF--TGFYGNPATTLRSASWQLLERLSYLS 92
+ W + + + SYS GHI+V+I S D +F TGFYG+P T R+ SW++L RLS+
Sbjct: 32 LFWRSGWGLRLLSYSVGHIHVLI-TESNDSQFYLTGFYGHPDTQQRNHSWEVLRRLSHTV 91
Query: 93 PLPWVVGGDFNEILADSEKSGGAPRPLLQMQAFRTAIGNSQLLDR---------VKNQRA 152
WVV GDFNEIL +K GG RP QM F+ A+ + +L +
Sbjct: 92 QGAWVVVGDFNEILFSKDKRGGRERPQRQMNNFKMALEDCRLSSTRFTGYPFTWARRYPD 151
Query: 153 GSSTWIHLDRFLLSHVVVCFYRDFCVDHLGLMEVSDHRPILASWDRGRRGAPEGRCLRPV 212
GS LDR + + V Y HL L SDH PIL PE R
Sbjct: 152 GSVVEERLDRCVANGVFFGRYSHLTTSHL-LAVGSDHYPILV---EACADDPEASAKRST 211
Query: 213 R--FEEGWTRFPECKDIIKQIWQATGRDRSLS----------------HQARVQAYLRIL 272
R FEE WT+ P+ +I++ W+ T +S+S H + V+ L+
Sbjct: 212 RFHFEEMWTKEPDFNKVIEEAWKVTDGVKSVSNSLSLCAKELKTWNHIHFSNVRNQLKHA 271
Query: 273 ATKVERGLVGVGGGTGILSGFIPEHLNGISEKK----LKASRIVQANGSQI--------- 332
++ + +L + E ++ + EK+ + SR+ Q +I
Sbjct: 272 YKELTALQGRLTTDQHVLKAKVEETISDLLEKQEIMWRQRSRVWQTEEQRIGDLFCDYFK 331
Query: 333 -------------------------RNRALLREFTRVEVEAALKGMSLTKAPGPNGVNAL 392
N LL+ FTR E+E L M TKAPG +G+ AL
Sbjct: 332 TLFSSTGGQQMERILNEVRPVITSAMNDRLLQAFTREELEHTLFQMFPTKAPGHDGMPAL 391
Query: 393 FYQQHWDLIKDETSALCLNILNGGDSVKELNHTYLVLVPKITGRRSVKDFRPISLCSVVY 452
F+Q++W ++ D+ + CL ILNG SV+E NHT + L+PK+ +V +FRPISLC+ VY
Sbjct: 392 FFQKYWHIVGDKVAKKCLQILNGEGSVREFNHTLIALIPKVKMPTTVSEFRPISLCTTVY 451
Query: 453 KICANAI-TRLKGVLHSVVSTEQSTFVSGRLISDNVIISG------MGLSKVDDASDGVS 512
K+ A I RLK VL V++ QS FV R+I DNV+ + G+ K D +
Sbjct: 452 KMIAKTIANRLKTVLPHVITENQSAFVPNRMILDNVMAAFEIMHTIKGVKKGRDVKMALK 511
Query: 513 NKMGRVGDE-----LCGVSSVLSF-AEWEAIV-------------------RISAFLGVR 572
M + D L + L F A W A V I G+R
Sbjct: 512 LDMAKAYDRVEWVFLREMMLKLGFSATWVAKVMDCISTTTFSMLWKGNPVGHIMPQRGLR 571
Query: 573 QGDPLSPYLF------------------------------------------IFVR---- 632
QG PLSPYLF +F++
Sbjct: 572 QGCPLSPYLFLMCTEGFSCLLRGAERRGDLVGVQVARGGPSVTHLLFADDSILFMKATNE 631
Query: 633 -----------------RVINYDKSMFMVSRNTNPDMQHFIRNTLGVLQTHSLGRYLGLP 692
+ INY KS F +S N I+ L V +YLGLP
Sbjct: 632 ACRALETLFQTYEEVSGQQINYSKSAFSLSPNATRADFDMIKGVLNVPVVQCHEKYLGLP 691
BLAST of Lag0007894 vs. ExPASy TrEMBL
Match:
A0A2N9I9F4 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50479 PE=3 SV=1)
HSP 1 Score: 312.8 bits (800), Expect = 3.7e-81
Identity = 226/747 (30.25%), Postives = 321/747 (42.97%), Query Frame = 0
Query: 33 VIWNNELNVNIFSYSAGHINVMIKA-TSEDCRFTGFYGNPATTLRSASWQLLERLSYLSP 92
+ W +NV+I SYS HI+ +I T RFT FYG P + LR SW LL ++ +
Sbjct: 990 LFWKQSINVSICSYSLSHIDTIIDGNTDNPWRFTCFYGAPESHLRENSWNLLRTINGQNN 1049
Query: 93 LPWVVGGDFNEILADSEKSGGAPRPLLQMQAFRTAIGNSQLLDR---------VKNQRAG 152
+PW GDFNEI+ +SEKSG P+ QMQ FR I +D N+
Sbjct: 1050 IPWCCAGDFNEIVRNSEKSGRRPQNERQMQGFRDVIDECGFVDLGFRGLPFTWCNNRLGN 1109
Query: 153 SSTWIHLDRFLLSHVVVCFYRDFCVDHLGLMEVSDHRPILASWDRGRRGAPEGRCLRPVR 212
++TW+ LDRF+ ++ V + V HL SDH+P+ W + RP R
Sbjct: 1110 NTTWLRLDRFMATNDWVLRFNQAVVYHLE-SSASDHKPL---WLNPKPTIIPRPHQRPFR 1169
Query: 213 FEEGWTRFPECKDIIKQIW----------QATGRDRSLSHQARVQA------YLRILATK 272
FEE W P C+ + W Q + R S + R + R L K
Sbjct: 1170 FEEMWRTDPGCEQTVTMAWVPKAHGPPMTQVQTKIRRCSEKLRKWSRDHFGNITRQLKEK 1229
Query: 273 VER-------GLVGVGGGTGILSGFIPEHLNGISEKKL-----------KASRIVQANGS 332
E+ +VG G T ++S + + E+K+ R
Sbjct: 1230 TEQLRKAEDESMVGQGHDT-VISLRKEVQILLVQEEKMWNQRSRTAWLKDGDRNTSTEPD 1289
Query: 333 QIR----------------------------------NRALLREFTRVEVEAALKGMSLT 392
IR N L FT E+E A+K M+
Sbjct: 1290 LIRTQFLNYYQELFTAAPLEDVETILDGIDPIVTDEMNARLTMPFTASEIETAMKQMAAL 1349
Query: 393 KAPGPNGVNALFYQQHWDLIKDETSALCLNILNGGDSVKELNHTYLVLVPKITGRRSVKD 452
KAPGP+G+ +FYQ +W ++ + S L LN G LNHTY+ L+PK V +
Sbjct: 1350 KAPGPDGMPPVFYQSYWQVVGSDVSTAVLQCLNSGTIPPSLNHTYVTLIPKTKNPERVTE 1409
Query: 453 FRPISLCSVVYKICANAI-TRLKGVLHSVVSTEQSTFVSGRLISDNVIISGMGLSKVDDA 512
+RPISLC+V+YK+ + + RLK VL V+S QS FV GRLI+DN++I+ L + +
Sbjct: 1410 YRPISLCNVIYKLISKVLANRLKKVLPKVISDTQSAFVPGRLITDNILIAFETLHHMHNQ 1469
Query: 513 SDG-------------------------VSNKMGRVGDELCGVSSVLSFAEWEAIVR--- 572
G V +MG + + +S + ++
Sbjct: 1470 RSGKVGSMALKLDMSKAYDRVEWGFLKQVMTRMGFHETWTSMIMACISTVSYSLLINGEP 1529
Query: 573 ---ISAFLGVRQGDPLSPYLF--------------------------------------- 607
I+ G+RQGDP+SPYLF
Sbjct: 1530 TGLITPTRGLRQGDPISPYLFLLCAEGLNGLLKKAANQGDIHGVSLCRRGPKITNLFFAD 1589
BLAST of Lag0007894 vs. ExPASy TrEMBL
Match:
A0A2N9EVR9 (F-box domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10759 PE=4 SV=1)
HSP 1 Score: 307.8 bits (787), Expect = 1.2e-79
Identity = 214/658 (32.52%), Postives = 317/658 (48.18%), Query Frame = 0
Query: 33 VIWNNELNVNIFSYSAGHINVMIKATSEDC-RFTGFYGNPATTLRSASWQLLERLSYLSP 92
++W +N+ + S+S HI+ ++ SE+ RFTGFYG P T R SW LL RL+ +
Sbjct: 913 LLWKKCVNIRVHSFSPSHIDAVVDEASENAWRFTGFYGAPETHKREESWTLLRRLNSQNS 972
Query: 93 LPWVVGGDFNEILADSEKSGGAPRPLLQMQAFRTAIGNSQLLD--------RVKNQRAGS 152
LPW GDFNE++ EK G R QMQ FR + +D N R G
Sbjct: 973 LPWCCIGDFNELVRLEEKQGRHTRSERQMQMFRDVLDECGFVDLGFTGPKFTWSNNRVGD 1032
Query: 153 STWIHLDRFLLSHVVVCFYRDFCVDHLGLMEVSDHRPILASWDRGRRGAPEGRCLRPVRF 212
TW LDR + + + + V HL + SDH+P+ S D R + + RF
Sbjct: 1033 MTWERLDRAVATLEWLLRFPSTRVHHLD-VRWSDHKPLWVSMDPMMRPS-----RKLFRF 1092
Query: 213 EEGWTRFPECKDIIKQIWQ----------ATGRDRSLSHQARV---QAY--LRILATKVE 272
EE WT C+++I W+ G+ + + RV Q++ ++ +VE
Sbjct: 1093 EEVWTSDQGCEEVITSAWKKPVPGVPMFSVWGKIHACRRELRVWSKQSFGNIKTKIHEVE 1152
Query: 273 RGL-----VGVGGGTGILSGFIPEHLNGISEKK------------LKAS----------- 332
+ L V + GG + + L+ + K+ LKA
Sbjct: 1153 KRLRQAETVSMQGGEHFPVVLLKKELHSLLAKEERLWRQRSRTEWLKAGDRNTRYIHCRA 1212
Query: 333 ----------RIVQANG--------------SQIRNRALLREFTRVEVEAALKGMSLTKA 392
R+ NG ++ N L REFT EV ALK M+ KA
Sbjct: 1213 TQRKRRNNVYRLKNPNGLWTTDFAQHIMPVVTKGMNEDLCREFTPAEVVVALKQMAPLKA 1272
Query: 393 PGPNGVNALFYQQHWDLIKDETSALCLNILNGGDSVKELNHTYLVLVPKITGRRSVKDFR 452
PGP+G+ LFY ++W LI DE + L LN G ++ NHTY+ L+PK+ ++V DFR
Sbjct: 1273 PGPDGLPPLFYHKYWHLIGDEVTKAVLTCLNTGKILQATNHTYITLIPKVQNPKAVVDFR 1332
Query: 453 PISLCSVVYKICANAI-TRLKGVLHSVVSTEQSTFVSGRLISDNVIISGMGLSKVDDASD 512
PISLC+V+YK+ + + RLK +L ++VS QS FV GRLI+DN++++ L +
Sbjct: 1333 PISLCNVIYKLISKVLANRLKTLLPTIVSESQSVFVPGRLITDNILVAFETLHHMQHQK- 1392
Query: 513 GVSNKMGRVGDELCGVSSVLSFAEWEAIVRISAFLGVRQGDPLSPYLFIFVR-------- 572
+ +MG + +L +S EW+ + R+ +G S + +
Sbjct: 1393 --AARMGSMALKL-DMSKAYDRVEWKYLQRVMEQMGFNSKWRASTLCYRKKKLQYEKASG 1452
Query: 573 RVINYDKSMFMVSRNTNPDMQHFIRNTLGVLQTHSLGRYLGLPSQTAWAKCAIFRSIRDR 606
+ IN K+ S++T + I+N LGV RYLGLPS AK + F I+++
Sbjct: 1453 QQINRQKTTIFFSKSTPDSDKLAIQNMLGVPAIKQYERYLGLPSFIGRAKYSSFAQIKEK 1512
BLAST of Lag0007894 vs. ExPASy TrEMBL
Match:
A0A2N9GDB5 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS25251 PE=4 SV=1)
HSP 1 Score: 306.2 bits (783), Expect = 3.4e-79
Identity = 237/782 (30.31%), Postives = 331/782 (42.33%), Query Frame = 0
Query: 6 RAMFHIDDRFGLVRFSSSIRFDSLHP----------YVIWNNELNVNIFSYSAGHINVMI 65
RA H +D L R ++F++ ++W E+ + + SYS HI+ ++
Sbjct: 556 RARVHHEDDGPLERLRCQLQFENKFVANSRNKGGGLCLLWKKEIKLRVNSYSHSHIDAIV 615
Query: 66 KATSEDC-RFTGFYGNPATTLRSASWQLLERLSYLSPLPWVVGGDFNEILADSEKSGGAP 125
+D RFTGFYG P T R SW LL RL+ +PW GDFNE++ EK G
Sbjct: 616 NENQQDTWRFTGFYGAPETHKRDESWNLLRRLNSQMTVPWCCMGDFNELVRIEEKQGSHN 675
Query: 126 RPLLQMQAFRTAIGNSQLLD--------RVKNQRAGSSTWIHLDRFLLSHVVVCFYRDFC 185
R QMQ FR + L+D N R G TW LDR + + + +
Sbjct: 676 RSERQMQLFRDVLDECGLVDLGFSGPRFTWTNNRPGDMTWERLDRVVATPDWLLMFPSAR 735
Query: 186 VDHLGLMEVSDHRPILASWDRGRRGAPEGRCLRPVRFEEGWTRFPECKDIIKQIWQAT-- 245
V HL SDH+PI + + + RP RFEE WT C+++IK WQ T
Sbjct: 736 VYHLE-GRWSDHKPIWVNTEPVVKPTK-----RPFRFEEVWTSDQGCEEVIKASWQTTVP 795
Query: 246 ----------------GRD-------------------RSLSHQARVQ---------AYL 305
GRD R ++RV+ Y
Sbjct: 796 GVPMYSLKHAEENSMLGRDHHRVSQLKKELHNLLAKEERLWRQRSRVEWLKAGDKNTRYF 855
Query: 306 RILATKVER-----GLVGVGGGTGILSGFIP----EHLNGISEKKL---------KASRI 365
AT+ +R L G +P +H N + + R+
Sbjct: 856 HCRATQRQRRNYISRLRNSAGQWTTDYSQVPHLFLDHYNSLFQTVTPDQVEHVVEDIQRV 915
Query: 366 VQANGSQIRNRALLREFTRVEVEAALKGMSLTKAPGPNGVNALFYQQHWDLIKDETSALC 425
V A N L++EFT EVE ALK M+ KAPGP+G+ LFYQQ+W LI + S+
Sbjct: 916 VTAE----MNCQLVKEFTSAEVEVALKQMAPLKAPGPDGLPPLFYQQYWHLIGQDVSSAV 975
Query: 426 LNILNGGDSVKELNHTYLVLVPKITGRRSVKDFRPISLCSVVYKICANAI-TRLKGVLHS 485
L LN G +K +NHTY+ L+PK+ V +FRPISLC+V+YKI + + RLK +L
Sbjct: 976 LTCLNSGKILKAINHTYITLIPKVQNPEEVVEFRPISLCNVIYKIISKILANRLKIILPH 1035
Query: 486 VVSTEQSTFVSGRLISDNVIISGMGLSKVDDASDGVSNKMGRVGDELCGVSSVLSFAEWE 545
+VS QS F+ GRLI+DN++++ L + G + M D +S EW+
Sbjct: 1036 IVSESQSAFIPGRLITDNILVAFETLHHMQHQKTGKTGSMALKLD----MSKAYDRVEWK 1095
Query: 546 AIVRISAFL-----------------------------------GVRQGDPLSPYLFIF- 605
+ R+ + G+RQGDPLSPYLF+
Sbjct: 1096 FLQRVMEKMGFHEKWVSIMMECISTVSYSILVNGEPHGYIKPSRGLRQGDPLSPYLFLLC 1155
BLAST of Lag0007894 vs. TAIR 10
Match:
AT1G43760.1 (DNAse I-like superfamily protein )
HSP 1 Score: 75.9 bits (185), Expect = 1.4e-13
Identity = 35/85 (41.18%), Postives = 49/85 (57.65%), Query Frame = 0
Query: 303 EVEAALKGMSLTKAPGPNGVNALFYQQHWDLIKDETSALCLNILNGGDSVKELNHTYLVL 362
E+ AA+ M KAPGP+ A F+ + W ++KD T A G +K N T + L
Sbjct: 535 EITAAVFAMPRNKAPGPDSFTAEFFWESWFVVKDSTIAAVKEFFRTGHLLKRFNATAITL 594
Query: 363 VPKITGRRSVKDFRPISLCSVVYKI 388
+PK+TG + FRP+S C+VVYKI
Sbjct: 595 IPKVTGVDQLSMFRPVSCCTVVYKI 619
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P14381 | 1.6e-12 | 36.03 | Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV... | [more] |
Match Name | E-value | Identity | Description | |
A0A2N9HTH6 | 2.0e-87 | 29.80 | Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... | [more] |
A0A5E4FZN9 | 3.7e-81 | 30.54 | PREDICTED: retrotransposon OS=Prunus dulcis OX=3755 GN=ALMOND_2B007697 PE=4 SV=1 | [more] |
A0A2N9I9F4 | 3.7e-81 | 30.25 | Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... | [more] |
A0A2N9EVR9 | 1.2e-79 | 32.52 | F-box domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10759 PE... | [more] |
A0A2N9GDB5 | 3.4e-79 | 30.31 | Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=F... | [more] |
Match Name | E-value | Identity | Description | |
AT1G43760.1 | 1.4e-13 | 41.18 | DNAse I-like superfamily protein | [more] |