Lag0006873 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0006873
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein
Location	chr6: 46646468 .. 46648213 (-)
RNA-Seq Expression	Lag0006873
Synteny	Lag0006873

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCTTTCTCCATTCAGGCTTGATATTGATGAACTGATCAATAAATATGCTGAGGTAGCTCTTAACTACTTTGAAGTTATGTAGATTTCATGTTTGTGCTAAATTGCTTATTGAAAAGATGTTAGTTTTTGAATTTATAACCCCTAGAAGTGTGGTGGTATACAGGGTGGGTTTACATCGTTTGCGGATATGAAGAAAGTATGGATGGGAAGAAAATTCACTTACATATTTGAGGCTGCTCCTTCTTCCAACTTGGCATTCTTCATGCAATCAATGTATGCCCAATCAATTGGTAGGCTCTGGCATAATAAACTTGGTCATTTATACATTAATTTGTTGGCAATTGGCTATTTCTTCTAAATTATGATGCACAAAGCTTTTTACTTCAATTCGTTATTTTTCTCAAGGGCCAAGCTTCTCTTCTAGTTTGTGAAATTCAGAAGAATTCTAATACTTCCTTTTACAGGTCACATGGTCAATACTGCTTCTTTGTCTCGCAGACTAGGTGGCCTTTATTGCCTTTACAGCCTTTATGAGACACAACCGTTTAAGCCCCCTTACCAAATCTACCTGTCTATTGGTATGATTTTTCAAAGTTTTTAATGTAAATGCATTTTATTTCTTTGATAATTATCTACAGATATGCAAGTTTTTCCTATTTCTTTGTTTGGGTGGACGTCCCTTGATATCATTATTACTCTTTCTTCGGTCATTTTACTACTCTTCCACATTTATAGGAGACTTGAAGAAACTGAAGGAACTTGTTGTTGATGCAAAAGAAAAGAATGTAAAAGTGGCATCTGCTGTGGTGAAAAGAATGTTAGAAAAGAACATGTTCCTCTTTGGATCTGTGGATATGAATGAGAGCTCTGCTTTGGAAACGGTGAATCAACTAACAGAATTGCAAAATGCTCGCATTCAAGTTGCCTATAATAAGTATGTTAGAGAAACAAATGGTTACCCTTTTTATTCTAGATATACATTGTACAAGTCATGATATCTTTATAGCATCCTTAACTTTTCCTTCTGATGTCTAGGTTGTTTGCTGATACCCCGATAGAAAATTATATCCATATGGACTTGGTAAGTGGAAAGTATAAAAACTTACCCTCTTGTTTCTGATCCACAATATTTTAATACCTGTTTAACTTGCATTATGAACTCTTGAAACTTTGTACATGAAAAGAGTTCCATGTTATTATCAACTATTTATCTAACTTTTCTTTGAAAATTTTCTTTTTCTCAATAATACAGGGGATGGAAGTTGGTTTGAATGTATTAAAAAAGATGTCAACAGATTATGCAGAGGCCAAGAAACTTGCATTATATGGTTAACTTCTTTTATCTCAATCTGTTGTCTTTGTTAGCCATTTGTGAGCAAACATATTTAATCTCTCTATTCTCTGTTATAATCTTTGATGTAGATACTTCTTTTTTCTGACTAATTTTACCCACTTGTTTCTCTGCCTTCTGTGTCTTGGCACCTAATTTGTTTCTGAAGAAGCGAGTGAGATAGTGGATGTCCAGGACATAAAGCACATATCAGAAGATGAGAGATTGATTGGAGATACAGTTGAAAAGTTTGCTGAGGACTGGAATGTTCAAAGAGGCGTGTTTTATGAACAAACTGGACTCGAGCAACAGCTTGTTCTAGACAAGGCACACGGAGAGCAACAGTTACTAGAACATCATGCCGATGAAAACTTTGACAAGGAACTCGAAAGAATGCTAACTGATGTTTAA

mRNA sequence

ATGGATCTTTCTCCATTCAGGCTTGATATTGATGAACTGATCAATAAATATGCTGAGGGTGGGTTTACATCGTTTGCGGATATGAAGAAAGTATGGATGGGAAGAAAATTCACTTACATATTTGAGGCTGCTCCTTCTTCCAACTTGGCATTCTTCATGCAATCAATGTATGCCCAATCAATTGGTCACATGGTCAATACTGCTTCTTTGTCTCGCAGACTAGGTGGCCTTTATTGCCTTTACAGCCTTTATGAGACACAACCGTTTAAGCCCCCTTACCAAATCTACCTGTCTATTGGAGACTTGAAGAAACTGAAGGAACTTGTTGTTGATGCAAAAGAAAAGAATGTAAAAGTGGCATCTGCTGTGGTGAAAAGAATGTTAGAAAAGAACATGTTCCTCTTTGGATCTGTGGATATGAATGAGAGCTCTGCTTTGGAAACGGTGAATCAACTAACAGAATTGCAAAATGCTCGCATTCAAGTTGCCTATAATAAGTTGTTTGCTGATACCCCGATAGAAAATTATATCCATATGGACTTGGGGATGGAAGTTGGTTTGAATGTATTAAAAAAGATGTCAACAGATTATGCAGAGGCCAAGAAACTTGCATTATATGAAGCGAGTGAGATAGTGGATGTCCAGGACATAAAGCACATATCAGAAGATGAGAGATTGATTGGAGATACAGTTGAAAAGTTTGCTGAGGACTGGAATGTTCAAAGAGGCGTGTTTTATGAACAAACTGGACTCGAGCAACAGCTTGTTCTAGACAAGGCACACGGAGAGCAACAGTTACTAGAACATCATGCCGATGAAAACTTTGACAAGGAACTCGAAAGAATGCTAACTGATGTTTAA

Coding sequence (CDS)

ATGGATCTTTCTCCATTCAGGCTTGATATTGATGAACTGATCAATAAATATGCTGAGGGTGGGTTTACATCGTTTGCGGATATGAAGAAAGTATGGATGGGAAGAAAATTCACTTACATATTTGAGGCTGCTCCTTCTTCCAACTTGGCATTCTTCATGCAATCAATGTATGCCCAATCAATTGGTCACATGGTCAATACTGCTTCTTTGTCTCGCAGACTAGGTGGCCTTTATTGCCTTTACAGCCTTTATGAGACACAACCGTTTAAGCCCCCTTACCAAATCTACCTGTCTATTGGAGACTTGAAGAAACTGAAGGAACTTGTTGTTGATGCAAAAGAAAAGAATGTAAAAGTGGCATCTGCTGTGGTGAAAAGAATGTTAGAAAAGAACATGTTCCTCTTTGGATCTGTGGATATGAATGAGAGCTCTGCTTTGGAAACGGTGAATCAACTAACAGAATTGCAAAATGCTCGCATTCAAGTTGCCTATAATAAGTTGTTTGCTGATACCCCGATAGAAAATTATATCCATATGGACTTGGGGATGGAAGTTGGTTTGAATGTATTAAAAAAGATGTCAACAGATTATGCAGAGGCCAAGAAACTTGCATTATATGAAGCGAGTGAGATAGTGGATGTCCAGGACATAAAGCACATATCAGAAGATGAGAGATTGATTGGAGATACAGTTGAAAAGTTTGCTGAGGACTGGAATGTTCAAAGAGGCGTGTTTTATGAACAAACTGGACTCGAGCAACAGCTTGTTCTAGACAAGGCACACGGAGAGCAACAGTTACTAGAACATCATGCCGATGAAAACTTTGACAAGGAACTCGAAAGAATGCTAACTGATGTTTAA

Protein sequence

MDLSPFRLDIDELINKYAEGGFTSFADMKKVWMGRKFTYIFEAAPSSNLAFFMQSMYAQSIGHMVNTASLSRRLGGLYCLYSLYETQPFKPPYQIYLSIGDLKKLKELVVDAKEKNVKVASAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIENYIHMDLGMEVGLNVLKKMSTDYAEAKKLALYEASEIVDVQDIKHISEDERLIGDTVEKFAEDWNVQRGVFYEQTGLEQQLVLDKAHGEQQLLEHHADENFDKELERMLTDV

Homology

[Close]

BLAST of Lag0006873 vs. NCBI nr
Match: XP_022143014.1 (uncharacterized protein LOC111013003 [Momordica charantia])

HSP 1 Score: 502.3 bits (1292), Expect = 2.8e-138
Identity = 255/286 (89.16%), Postives = 272/286 (95.10%), Query Frame = 0


Query: 1   MDLSPFRLDIDELINKYAEGGFTSFADMKKVWMGRKFTYIFEAAPSSNLAFFMQSMYAQS 60
           M+LSPFRLDIDELI +YAEGG+TSFADMK VW GRKFTYIFEAAP SNLAFFMQSMYAQS
Sbjct: 1   MNLSPFRLDIDELITEYAEGGYTSFADMKNVWTGRKFTYIFEAAP-SNLAFFMQSMYAQS 60

Query: 61  IGHMVNTASLSRRLGGLYCLYSLYETQPFKPPYQIYLSIGDLKKLKELVVDAKEKNVKVA 120
           IGHMV TASLSRRLGG YCLY LYETQPFKPPY+IYLSIG+LKKLKELVVDAKEKNVKVA
Sbjct: 61  IGHMVGTASLSRRLGGFYCLYCLYETQPFKPPYKIYLSIGELKKLKELVVDAKEKNVKVA 120

Query: 121 SAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIENYIHMD 180
           SAV KRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLF+DTPIE+YIHMD
Sbjct: 121 SAVAKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFSDTPIEDYIHMD 180

Query: 181 LGMEVGLNVLKKMSTDYAEAKKLALYEASEIVDVQDIKHISEDERLIGDTVEKFAEDWNV 240
           LGMEVGLNVLKKMSTDY+EAKKLALYEAS+I+DVQDIKHISED+RLIGDTVE+ AE+WNV
Sbjct: 181 LGMEVGLNVLKKMSTDYSEAKKLALYEASDILDVQDIKHISEDDRLIGDTVEQIAENWNV 240

Query: 241 QRGVFYEQTGLEQQLVLDKAHGEQQLLEHHADENFDKELERMLTDV 287
           QRGVFYEQTGL++QLV  +AH E QLL HHADENFDKELERMLTD+
Sbjct: 241 QRGVFYEQTGLDRQLVPVEAHKENQLLVHHADENFDKELERMLTDI 285

[Close]

BLAST of Lag0006873 vs. NCBI nr
Match: XP_023536865.1 (uncharacterized protein LOC111798120 [Cucurbita pepo subsp. pepo] >XP_023536866.1 uncharacterized protein LOC111798120 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 489.2 bits (1258), Expect = 2.4e-134
Identity = 251/286 (87.76%), Postives = 269/286 (94.06%), Query Frame = 0


Query: 1   MDLSPFRLDIDELINKYAEGGFTSFADMKKVWMGRKFTYIFEAAPSSNLAFFMQSMYAQS 60
           MDLSPFRLDIDELIN+YAEGGFTSFADMKKVW+GRKFTYIFEAAP  NLAFFMQSMYAQ+
Sbjct: 1   MDLSPFRLDIDELINEYAEGGFTSFADMKKVWIGRKFTYIFEAAP-LNLAFFMQSMYAQT 60

Query: 61  IGHMVNTASLSRRLGGLYCLYSLYETQPFKPPYQIYLSIGDLKKLKELVVDAKEKNVKVA 120
           IGHMV+TASLS RLGGLYCLYSLYETQPFKP Y+IYLSIG+LKKLKEL+V+AKEKNVKVA
Sbjct: 61  IGHMVSTASLSHRLGGLYCLYSLYETQPFKPSYKIYLSIGELKKLKELIVEAKEKNVKVA 120

Query: 121 SAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIENYIHMD 180
           SAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAY+KLFADTPIE++IHM+
Sbjct: 121 SAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYDKLFADTPIEDHIHMN 180

Query: 181 LGMEVGLNVLKKMSTDYAEAKKLALYEASEIVDVQDIKHISEDERLIGDTVEKFAEDWNV 240
           LGME GLN+LKKMS+DY+EAKK+ALYEASEIVDVQDIKHISEDE LIGDTVEK AEDWNV
Sbjct: 181 LGMEAGLNILKKMSSDYSEAKKVALYEASEIVDVQDIKHISEDEGLIGDTVEKIAEDWNV 240

Query: 241 QRGVFYEQTGLEQQLVLDKAHGEQQLLEHHADENFDKELERMLTDV 287
           QRG FYEQ G +QQL L +AH EQ   EHHADENFD ELERMLTDV
Sbjct: 241 QRGAFYEQVGHDQQLALVEAHEEQ---EHHADENFDMELERMLTDV 282

[Close]

BLAST of Lag0006873 vs. NCBI nr
Match: XP_022965853.1 (uncharacterized protein LOC111465616 [Cucurbita maxima])

HSP 1 Score: 488.4 bits (1256), Expect = 4.2e-134
Identity = 250/286 (87.41%), Postives = 269/286 (94.06%), Query Frame = 0


Query: 1   MDLSPFRLDIDELINKYAEGGFTSFADMKKVWMGRKFTYIFEAAPSSNLAFFMQSMYAQS 60
           MDLSPFRLDIDELIN+YAEGGFTSFADMKKVW+GRKFTYIFEAAP  NLAFFMQSMYAQ+
Sbjct: 1   MDLSPFRLDIDELINEYAEGGFTSFADMKKVWIGRKFTYIFEAAP-LNLAFFMQSMYAQT 60

Query: 61  IGHMVNTASLSRRLGGLYCLYSLYETQPFKPPYQIYLSIGDLKKLKELVVDAKEKNVKVA 120
           IGHMV+TASLS RLGGLYCLYSLYETQPFKP Y+IYLSIG+LKKLKEL+V+AKEKNVKVA
Sbjct: 61  IGHMVSTASLSHRLGGLYCLYSLYETQPFKPSYKIYLSIGELKKLKELIVEAKEKNVKVA 120

Query: 121 SAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIENYIHMD 180
           SAVVKRMLEKNMFLFGSVDMNE+SALETVNQLTELQNARI+VAY+KLFADTPIE+YIHM+
Sbjct: 121 SAVVKRMLEKNMFLFGSVDMNENSALETVNQLTELQNARIRVAYDKLFADTPIEDYIHMN 180

Query: 181 LGMEVGLNVLKKMSTDYAEAKKLALYEASEIVDVQDIKHISEDERLIGDTVEKFAEDWNV 240
           LGME GLN+LKKMS+DY+EAKK+ALYEASEIVDVQDIKHISEDE LIGDTVEK  EDWNV
Sbjct: 181 LGMEAGLNILKKMSSDYSEAKKVALYEASEIVDVQDIKHISEDEGLIGDTVEKIVEDWNV 240

Query: 241 QRGVFYEQTGLEQQLVLDKAHGEQQLLEHHADENFDKELERMLTDV 287
           QRGVFYEQ G +QQL L +AH EQ   EHHADENFD ELERMLTDV
Sbjct: 241 QRGVFYEQVGHDQQLALVEAHEEQ---EHHADENFDMELERMLTDV 282

[Close]

BLAST of Lag0006873 vs. NCBI nr
Match: XP_022938175.1 (uncharacterized protein LOC111444339 [Cucurbita moschata])

HSP 1 Score: 485.3 bits (1248), Expect = 3.5e-133
Identity = 249/286 (87.06%), Postives = 269/286 (94.06%), Query Frame = 0


Query: 1   MDLSPFRLDIDELINKYAEGGFTSFADMKKVWMGRKFTYIFEAAPSSNLAFFMQSMYAQS 60
           MDLSPFRLDIDELIN+YAEGGFTSFADMKKVW+GRKFTYIFEAAP  NLAFFMQSMYAQ+
Sbjct: 1   MDLSPFRLDIDELINEYAEGGFTSFADMKKVWIGRKFTYIFEAAP-LNLAFFMQSMYAQT 60

Query: 61  IGHMVNTASLSRRLGGLYCLYSLYETQPFKPPYQIYLSIGDLKKLKELVVDAKEKNVKVA 120
           IGHMV+TASLS RLGGLYCLYSLYETQPFKP Y+IYLSIG+LKKLKEL+V+AKEK VKVA
Sbjct: 61  IGHMVSTASLSHRLGGLYCLYSLYETQPFKPSYKIYLSIGELKKLKELIVEAKEKTVKVA 120

Query: 121 SAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIENYIHMD 180
           SAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARI+VAY+KLFADTPIE++IHM+
Sbjct: 121 SAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIRVAYDKLFADTPIEDHIHMN 180

Query: 181 LGMEVGLNVLKKMSTDYAEAKKLALYEASEIVDVQDIKHISEDERLIGDTVEKFAEDWNV 240
           LGME GLN+LKKMS+DY+EAKK+ALYEAS+IVDVQDIKHISEDE LIGDTVEK AEDWNV
Sbjct: 181 LGMEAGLNILKKMSSDYSEAKKVALYEASDIVDVQDIKHISEDEGLIGDTVEKIAEDWNV 240

Query: 241 QRGVFYEQTGLEQQLVLDKAHGEQQLLEHHADENFDKELERMLTDV 287
           QRGVFYEQ G +QQL L +AH EQ   EHHADENFD ELERMLTDV
Sbjct: 241 QRGVFYEQVGHDQQLALVEAHEEQ---EHHADENFDVELERMLTDV 282

[Close]

BLAST of Lag0006873 vs. NCBI nr
Match: XP_038890120.1 (uncharacterized protein LOC120079795 isoform X1 [Benincasa hispida] >XP_038890121.1 uncharacterized protein LOC120079795 isoform X1 [Benincasa hispida] >XP_038890122.1 uncharacterized protein LOC120079795 isoform X1 [Benincasa hispida] >XP_038890125.1 uncharacterized protein LOC120079795 isoform X1 [Benincasa hispida])

HSP 1 Score: 483.8 bits (1244), Expect = 1.0e-132
Identity = 246/286 (86.01%), Postives = 265/286 (92.66%), Query Frame = 0


Query: 1   MDLSPFRLDIDELINKYAEGGFTSFADMKKVWMGRKFTYIFEAAPSSNLAFFMQSMYAQS 60
           MDL+PFRLDIDELIN++AE GFTSF DMKKVW+GRKFTYIFEAAPS+NLAFFMQS+YAQS
Sbjct: 1   MDLAPFRLDIDELINEFAESGFTSFVDMKKVWVGRKFTYIFEAAPSTNLAFFMQSIYAQS 60

Query: 61  IGHMVNTASLSRRLGGLYCLYSLYETQPFKPPYQIYLSIGDLKKLKELVVDAKEKNVKVA 120
           I HM++TASLS RLGGLYCLY LYETQPFKP Y+IYLSIG+LKKLKELVVDAKE NVKVA
Sbjct: 61  ISHMLSTASLSHRLGGLYCLYCLYETQPFKPSYKIYLSIGELKKLKELVVDAKENNVKVA 120

Query: 121 SAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIENYIHMD 180
           S+VVKRMLEKNMFLFGSVDM ES+ALETVNQLTELQNARIQVAYNKLF DTPIENYIHMD
Sbjct: 121 SSVVKRMLEKNMFLFGSVDMKESAALETVNQLTELQNARIQVAYNKLFNDTPIENYIHMD 180

Query: 181 LGMEVGLNVLKKMSTDYAEAKKLALYEASEIVDVQDIKHISEDERLIGDTVEKFAEDWNV 240
           LGMEVG NVLKKMSTDY+EAKKLALYEASEIVDV DIKHI+EDE+LIGDTVEK AEDWN+
Sbjct: 181 LGMEVGSNVLKKMSTDYSEAKKLALYEASEIVDVHDIKHIAEDEKLIGDTVEKIAEDWNI 240

Query: 241 QRGVFYEQTGLEQQLVLDKAHGEQQLLEHHADENFDKELERMLTDV 287
           QRG F+EQTGL+QQLV      EQ LLE HADENFD+ELERMLTDV
Sbjct: 241 QRGFFHEQTGLDQQLV--PVEAEQLLLEGHADENFDQELERMLTDV 284

[Close]

BLAST of Lag0006873 vs. ExPASy TrEMBL
Match: A0A6J1CN36 (uncharacterized protein LOC111013003 OS=Momordica charantia OX=3673 GN=LOC111013003 PE=4 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 1.3e-138
Identity = 255/286 (89.16%), Postives = 272/286 (95.10%), Query Frame = 0


Query: 1   MDLSPFRLDIDELINKYAEGGFTSFADMKKVWMGRKFTYIFEAAPSSNLAFFMQSMYAQS 60
           M+LSPFRLDIDELI +YAEGG+TSFADMK VW GRKFTYIFEAAP SNLAFFMQSMYAQS
Sbjct: 1   MNLSPFRLDIDELITEYAEGGYTSFADMKNVWTGRKFTYIFEAAP-SNLAFFMQSMYAQS 60

Query: 61  IGHMVNTASLSRRLGGLYCLYSLYETQPFKPPYQIYLSIGDLKKLKELVVDAKEKNVKVA 120
           IGHMV TASLSRRLGG YCLY LYETQPFKPPY+IYLSIG+LKKLKELVVDAKEKNVKVA
Sbjct: 61  IGHMVGTASLSRRLGGFYCLYCLYETQPFKPPYKIYLSIGELKKLKELVVDAKEKNVKVA 120

Query: 121 SAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIENYIHMD 180
           SAV KRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLF+DTPIE+YIHMD
Sbjct: 121 SAVAKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFSDTPIEDYIHMD 180

Query: 181 LGMEVGLNVLKKMSTDYAEAKKLALYEASEIVDVQDIKHISEDERLIGDTVEKFAEDWNV 240
           LGMEVGLNVLKKMSTDY+EAKKLALYEAS+I+DVQDIKHISED+RLIGDTVE+ AE+WNV
Sbjct: 181 LGMEVGLNVLKKMSTDYSEAKKLALYEASDILDVQDIKHISEDDRLIGDTVEQIAENWNV 240

Query: 241 QRGVFYEQTGLEQQLVLDKAHGEQQLLEHHADENFDKELERMLTDV 287
           QRGVFYEQTGL++QLV  +AH E QLL HHADENFDKELERMLTD+
Sbjct: 241 QRGVFYEQTGLDRQLVPVEAHKENQLLVHHADENFDKELERMLTDI 285

[Close]

BLAST of Lag0006873 vs. ExPASy TrEMBL
Match: A0A6J1HQ65 (uncharacterized protein LOC111465616 OS=Cucurbita maxima OX=3661 GN=LOC111465616 PE=4 SV=1)

HSP 1 Score: 488.4 bits (1256), Expect = 2.0e-134
Identity = 250/286 (87.41%), Postives = 269/286 (94.06%), Query Frame = 0


Query: 1   MDLSPFRLDIDELINKYAEGGFTSFADMKKVWMGRKFTYIFEAAPSSNLAFFMQSMYAQS 60
           MDLSPFRLDIDELIN+YAEGGFTSFADMKKVW+GRKFTYIFEAAP  NLAFFMQSMYAQ+
Sbjct: 1   MDLSPFRLDIDELINEYAEGGFTSFADMKKVWIGRKFTYIFEAAP-LNLAFFMQSMYAQT 60

Query: 61  IGHMVNTASLSRRLGGLYCLYSLYETQPFKPPYQIYLSIGDLKKLKELVVDAKEKNVKVA 120
           IGHMV+TASLS RLGGLYCLYSLYETQPFKP Y+IYLSIG+LKKLKEL+V+AKEKNVKVA
Sbjct: 61  IGHMVSTASLSHRLGGLYCLYSLYETQPFKPSYKIYLSIGELKKLKELIVEAKEKNVKVA 120

Query: 121 SAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIENYIHMD 180
           SAVVKRMLEKNMFLFGSVDMNE+SALETVNQLTELQNARI+VAY+KLFADTPIE+YIHM+
Sbjct: 121 SAVVKRMLEKNMFLFGSVDMNENSALETVNQLTELQNARIRVAYDKLFADTPIEDYIHMN 180

Query: 181 LGMEVGLNVLKKMSTDYAEAKKLALYEASEIVDVQDIKHISEDERLIGDTVEKFAEDWNV 240
           LGME GLN+LKKMS+DY+EAKK+ALYEASEIVDVQDIKHISEDE LIGDTVEK  EDWNV
Sbjct: 181 LGMEAGLNILKKMSSDYSEAKKVALYEASEIVDVQDIKHISEDEGLIGDTVEKIVEDWNV 240

Query: 241 QRGVFYEQTGLEQQLVLDKAHGEQQLLEHHADENFDKELERMLTDV 287
           QRGVFYEQ G +QQL L +AH EQ   EHHADENFD ELERMLTDV
Sbjct: 241 QRGVFYEQVGHDQQLALVEAHEEQ---EHHADENFDMELERMLTDV 282

[Close]

BLAST of Lag0006873 vs. ExPASy TrEMBL
Match: A0A6J1FIY6 (uncharacterized protein LOC111444339 OS=Cucurbita moschata OX=3662 GN=LOC111444339 PE=4 SV=1)

HSP 1 Score: 485.3 bits (1248), Expect = 1.7e-133
Identity = 249/286 (87.06%), Postives = 269/286 (94.06%), Query Frame = 0


Query: 1   MDLSPFRLDIDELINKYAEGGFTSFADMKKVWMGRKFTYIFEAAPSSNLAFFMQSMYAQS 60
           MDLSPFRLDIDELIN+YAEGGFTSFADMKKVW+GRKFTYIFEAAP  NLAFFMQSMYAQ+
Sbjct: 1   MDLSPFRLDIDELINEYAEGGFTSFADMKKVWIGRKFTYIFEAAP-LNLAFFMQSMYAQT 60

Query: 61  IGHMVNTASLSRRLGGLYCLYSLYETQPFKPPYQIYLSIGDLKKLKELVVDAKEKNVKVA 120
           IGHMV+TASLS RLGGLYCLYSLYETQPFKP Y+IYLSIG+LKKLKEL+V+AKEK VKVA
Sbjct: 61  IGHMVSTASLSHRLGGLYCLYSLYETQPFKPSYKIYLSIGELKKLKELIVEAKEKTVKVA 120

Query: 121 SAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIENYIHMD 180
           SAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARI+VAY+KLFADTPIE++IHM+
Sbjct: 121 SAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIRVAYDKLFADTPIEDHIHMN 180

Query: 181 LGMEVGLNVLKKMSTDYAEAKKLALYEASEIVDVQDIKHISEDERLIGDTVEKFAEDWNV 240
           LGME GLN+LKKMS+DY+EAKK+ALYEAS+IVDVQDIKHISEDE LIGDTVEK AEDWNV
Sbjct: 181 LGMEAGLNILKKMSSDYSEAKKVALYEASDIVDVQDIKHISEDEGLIGDTVEKIAEDWNV 240

Query: 241 QRGVFYEQTGLEQQLVLDKAHGEQQLLEHHADENFDKELERMLTDV 287
           QRGVFYEQ G +QQL L +AH EQ   EHHADENFD ELERMLTDV
Sbjct: 241 QRGVFYEQVGHDQQLALVEAHEEQ---EHHADENFDVELERMLTDV 282

[Close]

BLAST of Lag0006873 vs. ExPASy TrEMBL
Match: A0A5A7VCA1 (Putative mediator of RNA polymerase II transcription subunit 26 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold285G00640 PE=4 SV=1)

HSP 1 Score: 478.0 bits (1229), Expect = 2.7e-131
Identity = 242/286 (84.62%), Postives = 262/286 (91.61%), Query Frame = 0


Query: 1   MDLSPFRLDIDELINKYAEGGFTSFADMKKVWMGRKFTYIFEAAPSSNLAFFMQSMYAQS 60
           MDLSPFRLDIDELIN++AE GFTSF DMKKVW+GRKFTYIFEAAPS+NLAFFMQS++AQS
Sbjct: 1   MDLSPFRLDIDELINEFAECGFTSFGDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQS 60

Query: 61  IGHMVNTASLSRRLGGLYCLYSLYETQPFKPPYQIYLSIGDLKKLKELVVDAKEKNVKVA 120
           I HM + ASL  RLGGLYCLY LYETQPF+PPY+IYLSIG+LKKLKELVVDAKE NVKV 
Sbjct: 61  ISHMRSAASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIGELKKLKELVVDAKENNVKVV 120

Query: 121 SAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIENYIHMD 180
           S VVKRMLEKNMFLFGSVDMNES+ALETVNQLTELQNAR+QVAYNKLF DTPIENYIHMD
Sbjct: 121 SFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYNKLFNDTPIENYIHMD 180

Query: 181 LGMEVGLNVLKKMSTDYAEAKKLALYEASEIVDVQDIKHISEDERLIGDTVEKFAEDWNV 240
           LGMEVG N+L KMSTDY+EAKKLALYEAS+IVDVQDIKHI+EDE+LIGDTVEK AEDWNV
Sbjct: 181 LGMEVGSNLLTKMSTDYSEAKKLALYEASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNV 240

Query: 241 QRGVFYEQTGLEQQLVLDKAHGEQQLLEHHADENFDKELERMLTDV 287
           QRGVFYEQTGL+QQL+      +QQLLE H D NFDKELERMLTDV
Sbjct: 241 QRGVFYEQTGLDQQLI--PVEADQQLLEDHTDVNFDKELERMLTDV 284

[Close]

BLAST of Lag0006873 vs. ExPASy TrEMBL
Match: A0A0A0LL25 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G008040 PE=4 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 6.1e-131
Identity = 242/286 (84.62%), Postives = 262/286 (91.61%), Query Frame = 0


Query: 1   MDLSPFRLDIDELINKYAEGGFTSFADMKKVWMGRKFTYIFEAAPSSNLAFFMQSMYAQS 60
           MDLSPFRLDIDELIN++AE GFTSF DMKKVW+GRKFTYIFEAAPS+NLAFFMQS++AQS
Sbjct: 1   MDLSPFRLDIDELINEFAECGFTSFVDMKKVWIGRKFTYIFEAAPSTNLAFFMQSIFAQS 60

Query: 61  IGHMVNTASLSRRLGGLYCLYSLYETQPFKPPYQIYLSIGDLKKLKELVVDAKEKNVKVA 120
           I HM++TASL  RLGGLYCLY LYETQPF+PPY+IYLSIG+LKKLKELVVDAKE NVKV 
Sbjct: 61  ISHMLSTASLPHRLGGLYCLYCLYETQPFRPPYKIYLSIGELKKLKELVVDAKENNVKVV 120

Query: 121 SAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIENYIHMD 180
           S VVKRMLEKNMFLFGSVDMNES+ALETVNQLTELQNAR+QVAY KLF DTPI NYIHMD
Sbjct: 121 SFVVKRMLEKNMFLFGSVDMNESAALETVNQLTELQNARVQVAYKKLFNDTPIGNYIHMD 180

Query: 181 LGMEVGLNVLKKMSTDYAEAKKLALYEASEIVDVQDIKHISEDERLIGDTVEKFAEDWNV 240
           LGMEVG N+L KMSTDY+EAKKLALYEAS+IVDVQDIKHI+EDE+LIGDTVEK AEDWNV
Sbjct: 181 LGMEVGSNILTKMSTDYSEAKKLALYEASKIVDVQDIKHIAEDEKLIGDTVEKIAEDWNV 240

Query: 241 QRGVFYEQTGLEQQLVLDKAHGEQQLLEHHADENFDKELERMLTDV 287
           QRGVFYEQTGL+QQ V      +QQLLE HAD NFDKELERMLTDV
Sbjct: 241 QRGVFYEQTGLDQQSV--PVEADQQLLEDHADVNFDKELERMLTDV 284

[Close]

BLAST of Lag0006873 vs. TAIR 10
Match: AT3G53270.1 (Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein )

HSP 1 Score: 315.1 bits (806), Expect = 5.9e-86
Identity = 158/284 (55.63%), Postives = 219/284 (77.11%), Query Frame = 0


Query: 1   MDLSPFRLDIDELINKYAEGGFTSFADMKKVWMGRKFTYIFEAAPSSNLAFFMQSMYAQS 60
           M+LSPF+ DIDELI+++ E   T+FADMK VW+ RKF++I+EA+P+SNLAFFMQS+Y  +
Sbjct: 1   MNLSPFKRDIDELIDEFVEDDLTTFADMKSVWLSRKFSHIYEASPNSNLAFFMQSLYVHT 60

Query: 61  IGHMVNTASLSRRLGGLYCLYSLYETQPFKPPYQIYLSIGDLKKLKELVVDAKEKNVKVA 120
           IGHMV+  S SRRLGGLYCLY L+E QPFKP ++IY+S+ +L K ++LVV+AK+K V++A
Sbjct: 61  IGHMVSIDSFSRRLGGLYCLYCLHEIQPFKPKFRIYISLQELGKFRDLVVEAKDKGVEIA 120

Query: 121 SAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIENYIHMD 180
           +AV K+ML++NM +FG+VD  E+SA +T++QLTELQNAR++ AY KL  DT I  +IH+D
Sbjct: 121 AAVAKKMLDENMLIFGAVD--ETSATKTIHQLTELQNARVRFAYEKLICDTSINQFIHLD 180

Query: 181 LGMEVGLNVLKKMSTDYAEAKKLALYEASEIVDVQDIKHISEDERLIGDTVEKFAEDWNV 240
           +G EV LN L KMS +YAEAKK A+  A EI+++ DIKHISE++ L+G+ +EK  E+W+ 
Sbjct: 181 MGKEVDLNSLDKMSIEYAEAKKRAVEGAGEIMEIDDIKHISEEKELMGERMEKLKEEWDS 240

Query: 241 QRGVFYEQTGLEQQLVLDKAHGEQQLLEHHADENFDKELERMLT 285
           QR  FYEQT L+      K   +   +EH  D+ FD EL+R+L+
Sbjct: 241 QRLYFYEQTKLDGFTTTPK---QLTNVEHDEDDGFD-ELDRLLS 278

[Close]

BLAST of Lag0006873 vs. TAIR 10
Match: AT3G53270.4 (Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein )

HSP 1 Score: 315.1 bits (806), Expect = 5.9e-86
Identity = 158/284 (55.63%), Postives = 219/284 (77.11%), Query Frame = 0


Query: 1   MDLSPFRLDIDELINKYAEGGFTSFADMKKVWMGRKFTYIFEAAPSSNLAFFMQSMYAQS 60
           M+LSPF+ DIDELI+++ E   T+FADMK VW+ RKF++I+EA+P+SNLAFFMQS+Y  +
Sbjct: 1   MNLSPFKRDIDELIDEFVEDDLTTFADMKSVWLSRKFSHIYEASPNSNLAFFMQSLYVHT 60

Query: 61  IGHMVNTASLSRRLGGLYCLYSLYETQPFKPPYQIYLSIGDLKKLKELVVDAKEKNVKVA 120
           IGHMV+  S SRRLGGLYCLY L+E QPFKP ++IY+S+ +L K ++LVV+AK+K V++A
Sbjct: 61  IGHMVSIDSFSRRLGGLYCLYCLHEIQPFKPKFRIYISLQELGKFRDLVVEAKDKGVEIA 120

Query: 121 SAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIENYIHMD 180
           +AV K+ML++NM +FG+VD  E+SA +T++QLTELQNAR++ AY KL  DT I  +IH+D
Sbjct: 121 AAVAKKMLDENMLIFGAVD--ETSATKTIHQLTELQNARVRFAYEKLICDTSINQFIHLD 180

Query: 181 LGMEVGLNVLKKMSTDYAEAKKLALYEASEIVDVQDIKHISEDERLIGDTVEKFAEDWNV 240
           +G EV LN L KMS +YAEAKK A+  A EI+++ DIKHISE++ L+G+ +EK  E+W+ 
Sbjct: 181 MGKEVDLNSLDKMSIEYAEAKKRAVEGAGEIMEIDDIKHISEEKELMGERMEKLKEEWDS 240

Query: 241 QRGVFYEQTGLEQQLVLDKAHGEQQLLEHHADENFDKELERMLT 285
           QR  FYEQT L+      K   +   +EH  D+ FD EL+R+L+
Sbjct: 241 QRLYFYEQTKLDGFTTTPK---QLTNVEHDEDDGFD-ELDRLLS 278

[Close]

BLAST of Lag0006873 vs. TAIR 10
Match: AT3G53270.3 (Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein )

HSP 1 Score: 315.1 bits (806), Expect = 5.9e-86
Identity = 158/284 (55.63%), Postives = 219/284 (77.11%), Query Frame = 0


Query: 1   MDLSPFRLDIDELINKYAEGGFTSFADMKKVWMGRKFTYIFEAAPSSNLAFFMQSMYAQS 60
           M+LSPF+ DIDELI+++ E   T+FADMK VW+ RKF++I+EA+P+SNLAFFMQS+Y  +
Sbjct: 1   MNLSPFKRDIDELIDEFVEDDLTTFADMKSVWLSRKFSHIYEASPNSNLAFFMQSLYVHT 60

Query: 61  IGHMVNTASLSRRLGGLYCLYSLYETQPFKPPYQIYLSIGDLKKLKELVVDAKEKNVKVA 120
           IGHMV+  S SRRLGGLYCLY L+E QPFKP ++IY+S+ +L K ++LVV+AK+K V++A
Sbjct: 61  IGHMVSIDSFSRRLGGLYCLYCLHEIQPFKPKFRIYISLQELGKFRDLVVEAKDKGVEIA 120

Query: 121 SAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIENYIHMD 180
           +AV K+ML++NM +FG+VD  E+SA +T++QLTELQNAR++ AY KL  DT I  +IH+D
Sbjct: 121 AAVAKKMLDENMLIFGAVD--ETSATKTIHQLTELQNARVRFAYEKLICDTSINQFIHLD 180

Query: 181 LGMEVGLNVLKKMSTDYAEAKKLALYEASEIVDVQDIKHISEDERLIGDTVEKFAEDWNV 240
           +G EV LN L KMS +YAEAKK A+  A EI+++ DIKHISE++ L+G+ +EK  E+W+ 
Sbjct: 181 MGKEVDLNSLDKMSIEYAEAKKRAVEGAGEIMEIDDIKHISEEKELMGERMEKLKEEWDS 240

Query: 241 QRGVFYEQTGLEQQLVLDKAHGEQQLLEHHADENFDKELERMLT 285
           QR  FYEQT L+      K   +   +EH  D+ FD EL+R+L+
Sbjct: 241 QRLYFYEQTKLDGFTTTPK---QLTNVEHDEDDGFD-ELDRLLS 278

[Close]

BLAST of Lag0006873 vs. TAIR 10
Match: AT3G53270.2 (Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein )

HSP 1 Score: 315.1 bits (806), Expect = 5.9e-86
Identity = 158/284 (55.63%), Postives = 219/284 (77.11%), Query Frame = 0


Query: 1   MDLSPFRLDIDELINKYAEGGFTSFADMKKVWMGRKFTYIFEAAPSSNLAFFMQSMYAQS 60
           M+LSPF+ DIDELI+++ E   T+FADMK VW+ RKF++I+EA+P+SNLAFFMQS+Y  +
Sbjct: 1   MNLSPFKRDIDELIDEFVEDDLTTFADMKSVWLSRKFSHIYEASPNSNLAFFMQSLYVHT 60

Query: 61  IGHMVNTASLSRRLGGLYCLYSLYETQPFKPPYQIYLSIGDLKKLKELVVDAKEKNVKVA 120
           IGHMV+  S SRRLGGLYCLY L+E QPFKP ++IY+S+ +L K ++LVV+AK+K V++A
Sbjct: 61  IGHMVSIDSFSRRLGGLYCLYCLHEIQPFKPKFRIYISLQELGKFRDLVVEAKDKGVEIA 120

Query: 121 SAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIENYIHMD 180
           +AV K+ML++NM +FG+VD  E+SA +T++QLTELQNAR++ AY KL  DT I  +IH+D
Sbjct: 121 AAVAKKMLDENMLIFGAVD--ETSATKTIHQLTELQNARVRFAYEKLICDTSINQFIHLD 180

Query: 181 LGMEVGLNVLKKMSTDYAEAKKLALYEASEIVDVQDIKHISEDERLIGDTVEKFAEDWNV 240
           +G EV LN L KMS +YAEAKK A+  A EI+++ DIKHISE++ L+G+ +EK  E+W+ 
Sbjct: 181 MGKEVDLNSLDKMSIEYAEAKKRAVEGAGEIMEIDDIKHISEEKELMGERMEKLKEEWDS 240

Query: 241 QRGVFYEQTGLEQQLVLDKAHGEQQLLEHHADENFDKELERMLT 285
           QR  FYEQT L+      K   +   +EH  D+ FD EL+R+L+
Sbjct: 241 QRLYFYEQTKLDGFTTTPK---QLTNVEHDEDDGFD-ELDRLLS 278

[Close]

BLAST of Lag0006873 vs. TAIR 10
Match: AT3G53270.5 (Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein )

HSP 1 Score: 315.1 bits (806), Expect = 5.9e-86
Identity = 158/284 (55.63%), Postives = 219/284 (77.11%), Query Frame = 0


Query: 1   MDLSPFRLDIDELINKYAEGGFTSFADMKKVWMGRKFTYIFEAAPSSNLAFFMQSMYAQS 60
           M+LSPF+ DIDELI+++ E   T+FADMK VW+ RKF++I+EA+P+SNLAFFMQS+Y  +
Sbjct: 1   MNLSPFKRDIDELIDEFVEDDLTTFADMKSVWLSRKFSHIYEASPNSNLAFFMQSLYVHT 60

Query: 61  IGHMVNTASLSRRLGGLYCLYSLYETQPFKPPYQIYLSIGDLKKLKELVVDAKEKNVKVA 120
           IGHMV+  S SRRLGGLYCLY L+E QPFKP ++IY+S+ +L K ++LVV+AK+K V++A
Sbjct: 61  IGHMVSIDSFSRRLGGLYCLYCLHEIQPFKPKFRIYISLQELGKFRDLVVEAKDKGVEIA 120

Query: 121 SAVVKRMLEKNMFLFGSVDMNESSALETVNQLTELQNARIQVAYNKLFADTPIENYIHMD 180
           +AV K+ML++NM +FG+VD  E+SA +T++QLTELQNAR++ AY KL  DT I  +IH+D
Sbjct: 121 AAVAKKMLDENMLIFGAVD--ETSATKTIHQLTELQNARVRFAYEKLICDTSINQFIHLD 180

Query: 181 LGMEVGLNVLKKMSTDYAEAKKLALYEASEIVDVQDIKHISEDERLIGDTVEKFAEDWNV 240
           +G EV LN L KMS +YAEAKK A+  A EI+++ DIKHISE++ L+G+ +EK  E+W+ 
Sbjct: 181 MGKEVDLNSLDKMSIEYAEAKKRAVEGAGEIMEIDDIKHISEEKELMGERMEKLKEEWDS 240

Query: 241 QRGVFYEQTGLEQQLVLDKAHGEQQLLEHHADENFDKELERMLT 285
           QR  FYEQT L+      K   +   +EH  D+ FD EL+R+L+
Sbjct: 241 QRLYFYEQTKLDGFTTTPK---QLTNVEHDEDDGFD-ELDRLLS 278

The following BLAST results are available for this feature:

BLAST of Lag0006873 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143014.1	2.8e-138	89.16	uncharacterized protein LOC111013003 [Momordica charantia]	[more]
XP_023536865.1	2.4e-134	87.76	uncharacterized protein LOC111798120 [Cucurbita pepo subsp. pepo] >XP_023536866....	[more]
XP_022965853.1	4.2e-134	87.41	uncharacterized protein LOC111465616 [Cucurbita maxima]	[more]
XP_022938175.1	3.5e-133	87.06	uncharacterized protein LOC111444339 [Cucurbita moschata]	[more]
XP_038890120.1	1.0e-132	86.01	uncharacterized protein LOC120079795 isoform X1 [Benincasa hispida] >XP_03889012...	[more]

BLAST of Lag0006873 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0006873 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CN36	1.3e-138	89.16	uncharacterized protein LOC111013003 OS=Momordica charantia OX=3673 GN=LOC111013...	[more]
A0A6J1HQ65	2.0e-134	87.41	uncharacterized protein LOC111465616 OS=Cucurbita maxima OX=3661 GN=LOC111465616...	[more]
A0A6J1FIY6	1.7e-133	87.06	uncharacterized protein LOC111444339 OS=Cucurbita moschata OX=3662 GN=LOC1114443...	[more]
A0A5A7VCA1	2.7e-131	84.62	Putative mediator of RNA polymerase II transcription subunit 26 isoform X1 OS=Cu...	[more]
A0A0A0LL25	6.1e-131	84.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G008040 PE=4 SV=1	[more]

BLAST of Lag0006873 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G53270.1	5.9e-86	55.63	Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein	[more]
AT3G53270.4	5.9e-86	55.63	Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein	[more]
AT3G53270.3	5.9e-86	55.63	Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein	[more]
AT3G53270.2	5.9e-86	55.63	Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein	[more]
AT3G53270.5	5.9e-86	55.63	Small nuclear RNA activating complex (SNAPc), subunit SNAP43 protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019188	Small nuclear RNA activating complex (SNAPc), subunit SNAP43	PFAM	PF09808	SNAPc_SNAP43	coord: 6..201 e-value: 4.4E-51 score: 173.7
IPR019188	Small nuclear RNA activating complex (SNAPc), subunit SNAP43	PANTHER	PTHR15131	SMALL NUCLEAR RNA ACTIVATING COMPLEX, POLYPEPTIDE 1	coord: 4..256
None	No IPR available	PANTHER	PTHR15131:SF3	SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 1	coord: 4..256

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0006873.1	Lag0006873.1	mRNA