Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATAATTTTAACCACTGAAAAGATAGAAAGAAAATTCTTCTCCTGTTGCTTTGACAAGAACTTCAAAGGGAGAGTGGTTAGGATCTGTGAGACTCACCTGAAAAGAAGATTCACTCTATCCGCTGAGGAAATCATTCTTGTTTGGATCACTGATGTGATAGAGGACCTCCTTCTTTCCCCAAACACACACGAGTTCTCTCGGAAAACGGACTGTGTCAATGGGTTCATATGGATTCAGAAAGTTCTAAACAAGAGAGGGAGCTTCATAGAAATAACAAAAGTGAGTAATGTAGGAGGGAAGCATAACCTGGTAATTCCTGTGGGAGCAGATTTTAACGGACGGAGGGACTTTGCCAGGCTGCTGAAAGACTTTCTGAACGGAAATGAGGAGGAACACCATGTGGTTAACGCTCATAAGCTAAAAGAAGGGACGTCATATGCGAAGATTGTGAAGTATAACTTATTCGTTTCGGAAAGGAAGATGAGCAAAATGGAACGTGGAAATGAGAGAACAACATTTGGGTTGAAACCCTACCAATGGAAAGTCAGGAAAATAGACTGGGATGAAGTTATAGTGGTTACTAAAAGAGACTTCCACGATGACTTGGGTAGAATTCTCGAGATTCTCCAAGAACAAACAATAGCACTTCATTATAAACCCATTTCAAGAGGATAA
mRNA sequence
ATGATAATTTTAACCACTGAAAAGATAGAAAGAAAATTCTTCTCCTGTTGCTTTGACAAGAACTTCAAAGGGAGAGTGGTTAGGATCTGTGAGACTCACCTGAAAAGAAGATTCACTCTATCCGCTGAGGAAATCATTCTTGTTTGGATCACTGATGTGATAGAGGACCTCCTTCTTTCCCCAAACACACACGAGTTCTCTCGGAAAACGGACTGTGTCAATGGGTTCATATGGATTCAGAAAGTTCTAAACAAGAGAGGGAGCTTCATAGAAATAACAAAAGTGAGTAATGTAGGAGGGAAGCATAACCTGGTAATTCCTGTGGGAGCAGATTTTAACGGACGGAGGGACTTTGCCAGGCTGCTGAAAGACTTTCTGAACGGAAATGAGGAGGAACACCATGTGGTTAACGCTCATAAGCTAAAAGAAGGGACGTCATATGCGAAGATTGTGAAGTATAACTTATTCGTTTCGGAAAGGAAGATGAGCAAAATGGAACGTGGAAATGAGAGAACAACATTTGGGTTGAAACCCTACCAATGGAAAGTCAGGAAAATAGACTGGGATGAAGTTATAGTGGTTACTAAAAGAGACTTCCACGATGACTTGGGTAGAATTCTCGAGATTCTCCAAGAACAAACAATAGCACTTCATTATAAACCCATTTCAAGAGGATAA
Coding sequence (CDS)
ATGATAATTTTAACCACTGAAAAGATAGAAAGAAAATTCTTCTCCTGTTGCTTTGACAAGAACTTCAAAGGGAGAGTGGTTAGGATCTGTGAGACTCACCTGAAAAGAAGATTCACTCTATCCGCTGAGGAAATCATTCTTGTTTGGATCACTGATGTGATAGAGGACCTCCTTCTTTCCCCAAACACACACGAGTTCTCTCGGAAAACGGACTGTGTCAATGGGTTCATATGGATTCAGAAAGTTCTAAACAAGAGAGGGAGCTTCATAGAAATAACAAAAGTGAGTAATGTAGGAGGGAAGCATAACCTGGTAATTCCTGTGGGAGCAGATTTTAACGGACGGAGGGACTTTGCCAGGCTGCTGAAAGACTTTCTGAACGGAAATGAGGAGGAACACCATGTGGTTAACGCTCATAAGCTAAAAGAAGGGACGTCATATGCGAAGATTGTGAAGTATAACTTATTCGTTTCGGAAAGGAAGATGAGCAAAATGGAACGTGGAAATGAGAGAACAACATTTGGGTTGAAACCCTACCAATGGAAAGTCAGGAAAATAGACTGGGATGAAGTTATAGTGGTTACTAAAAGAGACTTCCACGATGACTTGGGTAGAATTCTCGAGATTCTCCAAGAACAAACAATAGCACTTCATTATAAACCCATTTCAAGAGGATAA
Protein sequence
MIILTTEKIERKFFSCCFDKNFKGRVVRICETHLKRRFTLSAEEIILVWITDVIEDLLLSPNTHEFSRKTDCVNGFIWIQKVLNKRGSFIEITKVSNVGGKHNLVIPVGADFNGRRDFARLLKDFLNGNEEEHHVVNAHKLKEGTSYAKIVKYNLFVSERKMSKMERGNERTTFGLKPYQWKVRKIDWDEVIVVTKRDFHDDLGRILEILQEQTIALHYKPISRG
Homology
BLAST of Lag0006201 vs. NCBI nr
Match:
XP_031737554.1 (transcription factor Pur-alpha 1-like [Cucumis sativus])
HSP 1 Score: 131.7 bits (330), Expect = 7.8e-27
Identity = 63/134 (47.01%), Postives = 83/134 (61.94%), Query Frame = 0
Query: 8 KIERKFFSCCFDKNFKGRVVRICETHLKRRFTLSAEEIILVWITDVIEDLLLSPNTHEFS 67
KIE K FSC FD N +GRV+R+ E HL + +TL EE + W+ + +E++L + +F
Sbjct: 10 KIENKSFSCEFDANSRGRVIRLTEAHLNKSYTLLGEETLFGWLAESLEEVLQTSKPQKFF 69
Query: 68 RKTDCVNGFIWIQKVLNKRGSFIEITKVSNVGGKHNLVIPVGADFNGRRDFARLLKDFLN 127
RKT C GF WIQK NKRGSF+EI+KV G K N+V+P G D G F RLL DFLN
Sbjct: 70 RKTFCNGGFTWIQKTTNKRGSFLEISKVLKSGKKGNIVVPAGVDLKGWESFRRLLMDFLN 129
Query: 128 GNEEEHHVVNAHKL 142
+ + + KL
Sbjct: 130 DEVDSRALHSEKKL 143
BLAST of Lag0006201 vs. NCBI nr
Match:
KAG6601809.1 (hypothetical protein SDJN03_07042, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 90.9 bits (224), Expect = 1.5e-14
Identity = 44/99 (44.44%), Postives = 61/99 (61.62%), Query Frame = 0
Query: 8 KIERKFFSCCFDKNFKGRVVRICETHLKRRFTLSAEEIILVWITDVIEDLLLSPNTHEFS 67
KIE + FSC F G +I E H+ R F ++ EEI+ W D++EDLLL+P +
Sbjct: 7 KIENRAFSCWFHNEKHGEYTKIKEKHIGRFFKVTVEEIVF-WPVDILEDLLLAPPSLRVF 66
Query: 68 RKTDCVNGFIWIQKVLNKRGSFIEITKVSNVGGKHNLVI 107
RK C FIW+ ++ NKRGSFI++TKV + GGK L +
Sbjct: 67 RKPVCNGRFIWLHRIKNKRGSFIQVTKVQSSGGKGTLYL 104
BLAST of Lag0006201 vs. NCBI nr
Match:
KAA0041398.1 (hypothetical protein E6C27_scaffold206G00440 [Cucumis melo var. makuwa])
HSP 1 Score: 82.0 bits (201), Expect = 7.1e-12
Identity = 64/230 (27.83%), Postives = 110/230 (47.83%), Query Frame = 0
Query: 9 IERKFFSCCFDKNFKGRVVRICETHLKRRFTLSAEEIILVWITDVIEDLLLSPNTHEFSR 68
+E+K F DK + + I E + F+++ L W+ + LL +P T F
Sbjct: 13 VEKKDFVLSVDKRSRESNLLITEVGPYKSFSIAITLDSLEWLKTTFKALLNTPRTTRFFV 72
Query: 69 KTDCVNGFIWIQKVLNKRGSFIEITKVSNVGGKHNLVIPVGADFNGRRDFARLLKDFLNG 128
+ V+ +W+QK+ N+RG EI +V + G K +++P G D G F+ +L
Sbjct: 73 EKRYVDFCLWVQKIHNRRGYIAEIYRVDDRGRKCCILVPEGLDKTGWALFSDMLTCKKTS 132
Query: 129 NEEE---HHVVNAHKLKE---------------GTSYAKIVKYNLFVSERKMSKMERGNE 188
+++E H N K KE +YA++V + SE SK + +
Sbjct: 133 DKKEISTRHYYNQDKGKEKIQKPYDSSTDSESPRKTYAEVVS-SFSSSESDYSKAKNTSS 192
Query: 189 RTTFGLKPYQWKVRK------IDWDEVIVVTKRDFHDDLGRILEILQEQT 215
F L + ++RK IDW++ I++++R FHDD +I++ L+EQT
Sbjct: 193 LKRF-LPAMKSEIRKEERKNDIDWEKTIILSRRCFHDDWDKIIDRLREQT 240
BLAST of Lag0006201 vs. NCBI nr
Match:
KAA0063662.1 (hypothetical protein E6C27_scaffold329G001780 [Cucumis melo var. makuwa])
HSP 1 Score: 79.3 bits (194), Expect = 4.6e-11
Identity = 62/228 (27.19%), Postives = 107/228 (46.93%), Query Frame = 0
Query: 9 IERKFFSCCFDKNFKGRVVRICETHLKRRFTLSAEEIILVWITDVIEDLLLSPNTHEFSR 68
+E+K DK + + I E + F+++ L W+ + LL +P T F
Sbjct: 13 VEKKDSVLSVDKRSRESNLLITEVGPYKSFSIAITPDSLEWLKTTFKALLNTPRTTRFFV 72
Query: 69 KTDCVNGFIWIQKVLNKRGSFIEITKVSNVGGKHNLVIPVGADFNGRRDFARLLKDFLNG 128
+ V+ +W+QK+ N+RG EI +V + G K +++P G D G F +L
Sbjct: 73 EKRYVDFCLWVQKIHNRRGYIAEIYRVDDRGRKCCILVPEGLDKTGWALFNDMLTCKKTS 132
Query: 129 NEEE---HHVVNAHKLKE---------GTSYAKIVKYNLFVSERKMSKMERGNERTTFGL 188
+++E H N K KE S + Y VS S+ + ++T L
Sbjct: 133 DKKEISTRHFYNQDKGKEKIQKPYDSSTDSESPRKTYAEVVSSFSSSESDYSKAKSTSSL 192
Query: 189 KPY----QWKVRK------IDWDEVIVVTKRDFHDDLGRILEILQEQT 215
K + + ++RK IDW++ I++++R FHDD +I++ L+EQT
Sbjct: 193 KRFLPALKSEIRKEERKNDIDWEKTIILSRRCFHDDWAKIIDRLREQT 240
BLAST of Lag0006201 vs. NCBI nr
Match:
TYK18363.1 (hypothetical protein E5676_scaffold456G00820 [Cucumis melo var. makuwa])
HSP 1 Score: 79.3 bits (194), Expect = 4.6e-11
Identity = 62/228 (27.19%), Postives = 107/228 (46.93%), Query Frame = 0
Query: 9 IERKFFSCCFDKNFKGRVVRICETHLKRRFTLSAEEIILVWITDVIEDLLLSPNTHEFSR 68
+E+K DK + + I E + F+++ L W+ + LL +P T F
Sbjct: 13 VEKKDSVLSVDKRSRESNLLITEVGPYKSFSIAITPDSLEWLKTTFKALLNTPRTTRFFV 72
Query: 69 KTDCVNGFIWIQKVLNKRGSFIEITKVSNVGGKHNLVIPVGADFNGRRDFARLLKDFLNG 128
+ V+ +W+QK+ N+RG EI +V + G K +++P G D G F +L
Sbjct: 73 EKRYVDFCLWVQKIHNRRGYIAEIYRVDDRGRKCCILVPEGLDKTGWALFNDMLTCKKTS 132
Query: 129 NEEE---HHVVNAHKLKE---------GTSYAKIVKYNLFVSERKMSKMERGNERTTFGL 188
+++E H N K KE S + Y VS S+ + ++T L
Sbjct: 133 DKKEISTRHFYNQDKGKEKIQKPYDSSTDSESPKKTYAEVVSSFSSSESDYSKAKSTSSL 192
Query: 189 KPY----QWKVRK------IDWDEVIVVTKRDFHDDLGRILEILQEQT 215
K + + ++RK IDW++ I++++R FHDD +I++ L+EQT
Sbjct: 193 KRFLPALKSEIRKEERKNDIDWEKTIILSRRCFHDDWAKIIDRLREQT 240
BLAST of Lag0006201 vs. ExPASy TrEMBL
Match:
A0A0A0L427 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G572310 PE=4 SV=1)
HSP 1 Score: 98.2 bits (243), Expect = 4.6e-17
Identity = 45/89 (50.56%), Postives = 59/89 (66.29%), Query Frame = 0
Query: 43 EEIILVWITDVIEDLLLSPNTHEFSRKTDCVNGFIWIQKVLNKRGSFIEITKVSNVGGKH 102
EEI+ VW+ D +E++L +P + +F R+T C GF WIQ+ NKRGSF+EI+KV G K
Sbjct: 281 EEILFVWLVDSLEEVLQTPKSDKFFRETFCNGGFSWIQETTNKRGSFLEISKVLKSGKKG 340
Query: 103 NLVIPVGADFNGRRDFARLLKDFLNGNEE 132
N+V+P G D G F RLL DFLN E
Sbjct: 341 NIVVPAGIDLKGWEQFRRLLLDFLNAEYE 369
BLAST of Lag0006201 vs. ExPASy TrEMBL
Match:
A0A5A7TEP0 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold206G00440 PE=4 SV=1)
HSP 1 Score: 82.0 bits (201), Expect = 3.4e-12
Identity = 64/230 (27.83%), Postives = 110/230 (47.83%), Query Frame = 0
Query: 9 IERKFFSCCFDKNFKGRVVRICETHLKRRFTLSAEEIILVWITDVIEDLLLSPNTHEFSR 68
+E+K F DK + + I E + F+++ L W+ + LL +P T F
Sbjct: 13 VEKKDFVLSVDKRSRESNLLITEVGPYKSFSIAITLDSLEWLKTTFKALLNTPRTTRFFV 72
Query: 69 KTDCVNGFIWIQKVLNKRGSFIEITKVSNVGGKHNLVIPVGADFNGRRDFARLLKDFLNG 128
+ V+ +W+QK+ N+RG EI +V + G K +++P G D G F+ +L
Sbjct: 73 EKRYVDFCLWVQKIHNRRGYIAEIYRVDDRGRKCCILVPEGLDKTGWALFSDMLTCKKTS 132
Query: 129 NEEE---HHVVNAHKLKE---------------GTSYAKIVKYNLFVSERKMSKMERGNE 188
+++E H N K KE +YA++V + SE SK + +
Sbjct: 133 DKKEISTRHYYNQDKGKEKIQKPYDSSTDSESPRKTYAEVVS-SFSSSESDYSKAKNTSS 192
Query: 189 RTTFGLKPYQWKVRK------IDWDEVIVVTKRDFHDDLGRILEILQEQT 215
F L + ++RK IDW++ I++++R FHDD +I++ L+EQT
Sbjct: 193 LKRF-LPAMKSEIRKEERKNDIDWEKTIILSRRCFHDDWDKIIDRLREQT 240
BLAST of Lag0006201 vs. ExPASy TrEMBL
Match:
A0A5D3D494 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G00820 PE=4 SV=1)
HSP 1 Score: 79.3 bits (194), Expect = 2.2e-11
Identity = 62/228 (27.19%), Postives = 107/228 (46.93%), Query Frame = 0
Query: 9 IERKFFSCCFDKNFKGRVVRICETHLKRRFTLSAEEIILVWITDVIEDLLLSPNTHEFSR 68
+E+K DK + + I E + F+++ L W+ + LL +P T F
Sbjct: 13 VEKKDSVLSVDKRSRESNLLITEVGPYKSFSIAITPDSLEWLKTTFKALLNTPRTTRFFV 72
Query: 69 KTDCVNGFIWIQKVLNKRGSFIEITKVSNVGGKHNLVIPVGADFNGRRDFARLLKDFLNG 128
+ V+ +W+QK+ N+RG EI +V + G K +++P G D G F +L
Sbjct: 73 EKRYVDFCLWVQKIHNRRGYIAEIYRVDDRGRKCCILVPEGLDKTGWALFNDMLTCKKTS 132
Query: 129 NEEE---HHVVNAHKLKE---------GTSYAKIVKYNLFVSERKMSKMERGNERTTFGL 188
+++E H N K KE S + Y VS S+ + ++T L
Sbjct: 133 DKKEISTRHFYNQDKGKEKIQKPYDSSTDSESPKKTYAEVVSSFSSSESDYSKAKSTSSL 192
Query: 189 KPY----QWKVRK------IDWDEVIVVTKRDFHDDLGRILEILQEQT 215
K + + ++RK IDW++ I++++R FHDD +I++ L+EQT
Sbjct: 193 KRFLPALKSEIRKEERKNDIDWEKTIILSRRCFHDDWAKIIDRLREQT 240
BLAST of Lag0006201 vs. ExPASy TrEMBL
Match:
A0A5A7V5Z9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold329G001780 PE=4 SV=1)
HSP 1 Score: 79.3 bits (194), Expect = 2.2e-11
Identity = 62/228 (27.19%), Postives = 107/228 (46.93%), Query Frame = 0
Query: 9 IERKFFSCCFDKNFKGRVVRICETHLKRRFTLSAEEIILVWITDVIEDLLLSPNTHEFSR 68
+E+K DK + + I E + F+++ L W+ + LL +P T F
Sbjct: 13 VEKKDSVLSVDKRSRESNLLITEVGPYKSFSIAITPDSLEWLKTTFKALLNTPRTTRFFV 72
Query: 69 KTDCVNGFIWIQKVLNKRGSFIEITKVSNVGGKHNLVIPVGADFNGRRDFARLLKDFLNG 128
+ V+ +W+QK+ N+RG EI +V + G K +++P G D G F +L
Sbjct: 73 EKRYVDFCLWVQKIHNRRGYIAEIYRVDDRGRKCCILVPEGLDKTGWALFNDMLTCKKTS 132
Query: 129 NEEE---HHVVNAHKLKE---------GTSYAKIVKYNLFVSERKMSKMERGNERTTFGL 188
+++E H N K KE S + Y VS S+ + ++T L
Sbjct: 133 DKKEISTRHFYNQDKGKEKIQKPYDSSTDSESPRKTYAEVVSSFSSSESDYSKAKSTSSL 192
Query: 189 KPY----QWKVRK------IDWDEVIVVTKRDFHDDLGRILEILQEQT 215
K + + ++RK IDW++ I++++R FHDD +I++ L+EQT
Sbjct: 193 KRFLPALKSEIRKEERKNDIDWEKTIILSRRCFHDDWAKIIDRLREQT 240
BLAST of Lag0006201 vs. ExPASy TrEMBL
Match:
A0A5A7TFK7 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold366G00060 PE=4 SV=1)
HSP 1 Score: 77.0 bits (188), Expect = 1.1e-10
Identity = 65/233 (27.90%), Postives = 100/233 (42.92%), Query Frame = 0
Query: 9 IERKFFSCCFDKNFKGRVVRICETHLKRRFTLSAEEIILVWITDVIEDLLLSPNTHEFSR 68
IE+K F D + + I E + F+++ L W+ LL +P T F
Sbjct: 13 IEKKDFVLSVDNWSRDFKLLITEVGPYKSFSIAVTLESLEWLKSSFRTLLDTPRTTRFFL 72
Query: 69 KTDCVNGFIWIQKVLNKRGSFIEITKVSNVGGKHNLVIPVGADFNGRRDFARLL---KDF 128
+ +W+QK N++G EI +V + G K +++P GA+ +G F LL KD
Sbjct: 73 EKRFEECCLWVQKTYNRKGYIAEIYRVDDRGRKCCILVPEGAEKSGWAHFVSLLHGKKD- 132
Query: 129 LNGNEEEHHVVNAHKLKEG------------TSYAKIVKYNLFVSERKMSKMER----GN 188
++ + + K+++G SYA+ V E S+ E G
Sbjct: 133 -PSSKTNYRTILNTKMRDGFSSSDSGEDTKRRSYAEAVIKGSSSDEESNSRTENIKKTGK 192
Query: 189 ERTTFGLKPYQWKVRKIDWDEVIVVTKRDFHDDLGRILEILQEQ-TIALHYKP 222
TTF DW+ V+T+R FHDD RI+E L EQ + YKP
Sbjct: 193 SNTTF----------SFDWERTAVLTRRYFHDDWERIVEKLNEQLDTTVRYKP 233
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_031737554.1 | 7.8e-27 | 47.01 | transcription factor Pur-alpha 1-like [Cucumis sativus] | [more] |
KAG6601809.1 | 1.5e-14 | 44.44 | hypothetical protein SDJN03_07042, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAA0041398.1 | 7.1e-12 | 27.83 | hypothetical protein E6C27_scaffold206G00440 [Cucumis melo var. makuwa] | [more] |
KAA0063662.1 | 4.6e-11 | 27.19 | hypothetical protein E6C27_scaffold329G001780 [Cucumis melo var. makuwa] | [more] |
TYK18363.1 | 4.6e-11 | 27.19 | hypothetical protein E5676_scaffold456G00820 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0L427 | 4.6e-17 | 50.56 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G572310 PE=4 SV=1 | [more] |
A0A5A7TEP0 | 3.4e-12 | 27.83 | DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
A0A5D3D494 | 2.2e-11 | 27.19 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A5A7V5Z9 | 2.2e-11 | 27.19 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A5A7TFK7 | 1.1e-10 | 27.90 | DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2... | [more] |
Match Name | E-value | Identity | Description | |