Lag0005782 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0005782
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr6: 29898958 .. 29900274 (+)
RNA-Seq Expression	Lag0005782
Synteny	Lag0005782

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATGCTCCTAGCCCACACGAGCTTAAAAGGTGAGTGCAAAAAAATCTTGAACTACGTTATGACTTGATCCCTATTCCATGAGGGTACGTAGGCAGCTTAAAGAAAACTTTAAGTTCAGTCTCTATAAAAAAAAAAGAAAGGTTCTTCGCTGCAGTTCCTTCTCTCCAAGTTCGAGGGTCCTTACACTGTACGCTATTGCGTTGTTCCTTCTCCAAGTTCGAAGGTTCTTCGTTGTATCCTGCTGTGTTGTTCCTTCTCCAAGTTCGAGGGTTCTCAGTTGTACGACTACTACGTTGTTCCTCCTCCAAGTGTGAAGGATCTTATGTGGTGCGTTGTTGCATTGTTCCCTCTTCTCTCAAGTTCGATGGTTCTCACGCAGCTTTGCTGGAGTTTCTTCTCCCCAAGTTCGAAGGTTCTCACGCGCTCCATTGCAGTTCCTTCTTTCCAAGGTCGAAGGTTCTCACTCGCTGCGTTGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCACGCGCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGTAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGTGCTTCGCTGCAGTTCCTTCTCTCCAAGGTCGAAGGTTCTCACGCGCTGCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGTGCTTCGCTGCAGTTCCTTCTCTCCAAGGTCGAAGGTTCTCACGCGCTGCGGTTCTCACGTGCTTCGCTGCAGTTCCTTCTCTCCAAGGTCGAAGGTTCTCACGCGCTGCGTTGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCACGAACCTTCGACCTTGGAGAGAAGGAACTGCATCGAAGCGACGTGAGAACCTTCGAACTTGGAGGAAGGAACTGCAGCGAAGCGCGTGAGAACCTTCAAATTTGGGAGAAGGAACTGCAGCGAAGTGCGTGAACCTTCGAACTTGGGGAGAAAGAACTGCAACGCAGCGAGTGAGAACCTTCGACCTTGGAAAGAAGGAACTGCAACGGAGCGCGTGAGAACCTTCGAACTTGGGGAGAAGAAACTCCAGCAAAGCTGCGTGAGAACCATCGAACTTGAGAGAAGAGGGAACAATGCAACAACGCACCACATAAGATCCTTCACACTTGGAGGAGGAACAACGTAG

mRNA sequence

ATGATGCTCCTAGCCCACACGAGCTTAAAAGGTTCTTCGCTGCAGTTCCTTCTCTCCAAGTTCGAGGGTCCTTACACTGTACGCTATTGCGTTGTTCCTTCTCCAAGTTCGAAGGTTCTTCGTTGTATCCTGCTGTGTTGTTCCTTCTCCAAGTTCGAGGGTTCTCAGTTGTACGACTACTACGTTGTTCCTCCTCCAAGTGTGAAGGATCTTATGTGGTGCGTTGTTGCATTGTTCCCTCTTCTCTCAAGTTCGATGGTTCTCACGCAGCTTTGCTGGAGTTTCTTCTCCCCAAGTTCGAAGGTTCTCACGCGCTCCATTGCAGTTCCTTCTTTCCAAGGTCGAAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGTAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGTGCTTCGCTGCAGTTCCTTCTCTCCAAGGTCGAAGGTTCTCACGCGCTGCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGTGCTTCGCTGCAGTTCCTTCTCTCCAAGGTCGAAGGTTCTCACGCGCTGCGGTTCTCACGTGCTTCGCTGCAGTTCCTTCTCTCCAAGGTCGAAGGTTCTCACGCGCTGCGTTGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCACGAACCTTCGACCTTGGAGAGAAGGAACTGCATCGAAGCGACGTGAGAACCTTCGAACTTGGAGGAAGGAACTGCAGCGAAGCGCGTGAGAACCTTCAAATTTGGGAGAAGGAACTGCAGCGAACGAGTGAGAACCTTCGACCTTGGAAAGAAGGAACTGCAACGGAGCGCGTGAGAACCTTCGAACTTGGGGAGAAGAAACTCCAGCAAAGCTGCGTGAGAACCATCGAACTTGAGAGAAGAGGGAACAATGCAACAACGCACCACATAAGATCCTTCACACTTGGAGGAGGAACAACGTAG

Coding sequence (CDS)

ATGATGCTCCTAGCCCACACGAGCTTAAAAGGTTCTTCGCTGCAGTTCCTTCTCTCCAAGTTCGAGGGTCCTTACACTGTACGCTATTGCGTTGTTCCTTCTCCAAGTTCGAAGGTTCTTCGTTGTATCCTGCTGTGTTGTTCCTTCTCCAAGTTCGAGGGTTCTCAGTTGTACGACTACTACGTTGTTCCTCCTCCAAGTGTGAAGGATCTTATGTGGTGCGTTGTTGCATTGTTCCCTCTTCTCTCAAGTTCGATGGTTCTCACGCAGCTTTGCTGGAGTTTCTTCTCCCCAAGTTCGAAGGTTCTCACGCGCTCCATTGCAGTTCCTTCTTTCCAAGGTCGAAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGTAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGTGCTTCGCTGCAGTTCCTTCTCTCCAAGGTCGAAGGTTCTCACGCGCTGCGCTGCAGTTCCTTCCTCCAAGTTCGAAGGTTCTCACGTCGCTTCGCTGCAGTTCCTTCCTCCAAATTCGAAGGTTCTCACGTGCTTCGCTGCAGTTCCTTCTCTCCAAGGTCGAAGGTTCTCACGCGCTGCGGTTCTCACGTGCTTCGCTGCAGTTCCTTCTCTCCAAGGTCGAAGGTTCTCACGCGCTGCGTTGCAGTTCTTTCTCCCCAAGTTCGAAGGTTCACGAACCTTCGACCTTGGAGAGAAGGAACTGCATCGAAGCGACGTGAGAACCTTCGAACTTGGAGGAAGGAACTGCAGCGAAGCGCGTGAGAACCTTCAAATTTGGGAGAAGGAACTGCAGCGAACGAGTGAGAACCTTCGACCTTGGAAAGAAGGAACTGCAACGGAGCGCGTGAGAACCTTCGAACTTGGGGAGAAGAAACTCCAGCAAAGCTGCGTGAGAACCATCGAACTTGAGAGAAGAGGGAACAATGCAACAACGCACCACATAAGATCCTTCACACTTGGAGGAGGAACAACGTAG

Protein sequence

MMLLAHTSLKGSSLQFLLSKFEGPYTVRYCVVPSPSSKVLRCILLCCSFSKFEGSQLYDYYVVPPPSVKDLMWCVVALFPLLSSSMVLTQLCWSFFSPSSKVLTRSIAVPSFQGRSSFLQVRRFSRRFAVVPSSKFEGSHVLRCSSFSPRSKVLTRCAAVPSSKFEGSHVASLQFLPPNSKVLTCFAAVPSLQGRRFSRAAVLTCFAAVPSLQGRRFSRAALQFFLPKFEGSRTFDLGEKELHRSDVRTFELGGRNCSEARENLQIWEKELQRTSENLRPWKEGTATERVRTFELGEKKLQQSCVRTIELERRGNNATTHHIRSFTLGGGTT

Homology

The following BLAST results are available for this feature:

BLAST of Lag0005782 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0005782 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0005782 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0005782 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 257..277

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0005782.1	Lag0005782.1	mRNA