Lag0005725 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0005725
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	CCHC-type domain-containing protein
Location	chr6: 27208154 .. 27210294 (-)
RNA-Seq Expression	Lag0005725
Synteny	Lag0005725

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGAAATTTCGTCGAAATGGGGGGAAGATCGAAACTTCCCCCCTTGGAAATGTCGATATGGTCGACATACCGACATTTCGGTGGAAATGTCGGTATGTCGACGGAAATTTGATACCTTGGGTAGTGTACGTATTTAATGCATTTTGACCATTATGTTTGGGAAATTCAAAAAGTTGGTTTAATAAAAAAAAAATTAAAAAAAATTGAGCTACACGTTCTTACTTTTTTTTTTTAATATTAGCTACACGTTCTTACTTTGGAAAAAATCGTTTTTGACTTATTTCAAAAAAAAAAAAATCGTTTTTGACTTTAAATTTTAAGAGTTGTTCAATTTCAAACCCTAAACCCCCTAAACCCTAAAATTTCAAACCCTAAACTTTCAATTTCATGGGTCCCCGTAAGTCTCTCTACTCTCCTGTAGAGAAGAAAGACTTTGAAGTGGACGTTTAGCTGGGCAACTTGGGTTGCAGGTATCGGTGGGGTTCTAGCCTCAAGGAGTGGGCAACCTGGGTTGCAGGTATCAGTGGGGTTTTAGCCTGAAGCATTTGGAATCGATGGAGGGAGAAACGACAAACGACCAAAGGGAAACAGCTAATGGATTCAAGGAACAACCACAAGAAACAGAGCAAGCTGAAGCGAGCATAAACAAACAATTTCAGAAGTTAAACCTGACGGCTGATGAAAAAAGGAAAGTCTTGGGAATGGAAGACGATGAGCTAAAAAGAAAAGTGGAAGATCTGGAGCACATAGCTGTCTGCAAAATACTTACTGAAAAACACATTAATCCGGAATTCTTTAAGAATATGATGCCCAGAATTTGGAACATTGAAGGAAGGGTCAACATCAAAAAGGTAGGGGAGAATATGTTTGAATGCATATTTAATTCTCTAAGGGACAAAAGGAAAATACTAGAAGGGGGTCCGTGGATATATGACAGGGGTCTGTTAGCTTTTGAAGAAATTAAAGGCAATGAAAGATACTCCTGACTCGAATTCAGGTACACATCTTTCTGGGTTCATTTTATTGACCTACCAAGAATCTGTCTAAACAGAAAATGGGCTGAAGACTTGGGAAACACGGTGGGATCCTTTGAAAAATTTGACCTGGATGATCTAGAAAGGGAAGGAAGCGGGTCTTTAAGAGTACGAGTAAGATTTGATATTACTCAACCTCTGAGACGAGGAGCTATGATAAGAATCGGCACCAAAAGGGAAGAAGAGTGGATAGATATGAGATATGAAAAACTCCCTGATTTCTGTTACGGCTGCGGGCGAGTACGACACTTAGCAAGAGAATGTGACGATGATGAAGCTCTTAAAGCAGAGAAGTTGGAATATGGAGAATGGTTACAGAAAGCTCCCAGTATTAAAGGAAAATTCAAAGGCCATAAAGAAATGGGGAAGAAGGAAACAGAGAAAACCAGAGCATCAAGGACAAAAGAAAAAGGAAAAAAGGAAGAGGCAAGCAGTTACAACCAGCACCGCCGGCCGGAAGAGTCGCCGGAGAAGAAAGAGACGAGGGAAACAGGGAAGGAAAGGAAAACGACAAAGGCAACGGCTAGTTCAGAAAACATAGAAACCAGAGACATAATGATTACGGATCAAACCCCAAAAACGGCAGCTGACAGCTCTAAGGCAAAAGGAAAAGAAAGGATGACAGAGGTTGAGATGTACTCTGTACCTGCTATGGAAACAGACGACAAAGCCCATTACAAAATAAAAAAACAAAATCAAGGGCCCAAACCTGAACTAAGTCTCTGTGAGGATTTGGGCCAAGGAAGAAAAGGTGACCAGAAAAAAGAAATAATGTATCCAGATATGGAGAAGGCCATCCAAAACAGCAACATGGAAATGAAATACATTGGAAGCTCAGAGAAGTATGAAGAAGTCAACCTACAGACAAGAATGAATATACAAACAGCAGCGAAGAAAAGTGGAAAATCTTGGAAACGAAGGGCAAGGGAAGATCAAACACACAGGACAGTGGGAAAGGAGGATGAAAAACTGATAAGTAAAGGGAAGCATGAGAGAGAAAACCAAGAGGAGGATAAAGAAAGAAATAGGCTATGTTCAAATTACTTCGGGTCAACCGTTGGGATATCGGCGGGAGCTGTGGATCAGCCCCGCCGGACGCCATGA

mRNA sequence

ATGTCGAAATTTCGTCGAAATGGGGGGAAGATCGAAACTTCCCCCCTTGGAAATGTCGATATGGTCGACATACCGACATTTCGGTGGAAATGTCGGTATGTCGACGGAAATTTGATACCTTGGGTAGTGTATCAGTGGGGTTTTAGCCTGAAGCATTTGGAATCGATGGAGGGAGAAACGACAAACGACCAAAGGGAAACAGCTAATGGATTCAAGGAACAACCACAAGAAACAGAGCAAGCTGAAGCGAGCATAAACAAACAATTTCAGAAGTTAAACCTGACGGCTGATGAAAAAAGGAAAGTCTTGGGAATGGAAGACGATGAGCTAAAAAGAAAAGTGGAAGATCTGGAGCACATAGCTGTCTGCAAAATACTTACTGAAAAACACATTAATCCGGAATTCTTTAAGAATATGATGCCCAGAATTTGGAACATTGAAGGAAGGGTCAACATCAAAAAGGTAGGGGAGAATATGTACACATCTTTCTGGGTTCATTTTATTGACCTACCAAGAATCTGTCTAAACAGAAAATGGGCTGAAGACTTGGGAAACACGGTGGGATCCTTTGAAAAATTTGACCTGGATGATCTAGAAAGGGAAGGAAGCGGGTCTTTAAGAGTACGAGTAAGATTTGATATTACTCAACCTCTGAGACGAGGAGCTATGATAAGAATCGGCACCAAAAGGGAAGAAGAGTGGATAGATATGAGATATGAAAAACTCCCTGATTTCTGTTACGGCTGCGGGCGAGTACGACACTTAGCAAGAGAATGTGACGATGATGAAGCTCTTAAAGCAGAGAAGTTGGAATATGGAGAATGGTTACAGAAAGCTCCCAGTATTAAAGGAAAATTCAAAGGCCATAAAGAAATGGGGAAGAAGGAAACAGAGAAAACCAGAGCATCAAGGACAAAAGAAAAAGGAAAAAAGGAAGAGGCAAGCAGTTACAACCAGCACCGCCGGCCGGAAGAGTCGCCGGAGAAGAAAGAGACGAGGGAAACAGGGAAGGAAAGGAAAACGACAAAGGCAACGGCTAGTTCAGAAAACATAGAAACCAGAGACATAATGATTACGGATCAAACCCCAAAAACGGCAGCTGACAGCTCTAAGGCAAAAGGAAAAGAAAGGATGACAGAGGTTGAGATGTACTCTGTACCTGCTATGGAAACAGACGACAAAGCCCATTACAAAATAAAAAAACAAAATCAAGGGCCCAAACCTGAACTAAGTCTCTGTGAGGATTTGGGCCAAGGAAGAAAAGGTGACCAGAAAAAAGAAATAATGTATCCAGATATGGAGAAGGCCATCCAAAACAGCAACATGGAAATGAAATACATTGGAAGCTCAGAGAAGTATGAAGAAGTCAACCTACAGACAAGAATGAATATACAAACAGCAGCGAAGAAAAGTGGAAAATCTTGGAAACGAAGGGCAAGGGAAGATCAAACACACAGGACAGTGGGAAAGGAGGATGAAAAACTGATAAGTAAAGGGAAGCATGAGAGAGAAAACCAAGAGGAGGATAAAGAAAGAAATAGGCTATGTTCAAATTACTTCGGGTCAACCGTTGGGATATCGGCGGGAGCTGTGGATCAGCCCCGCCGGACGCCATGA

Coding sequence (CDS)

ATGTCGAAATTTCGTCGAAATGGGGGGAAGATCGAAACTTCCCCCCTTGGAAATGTCGATATGGTCGACATACCGACATTTCGGTGGAAATGTCGGTATGTCGACGGAAATTTGATACCTTGGGTAGTGTATCAGTGGGGTTTTAGCCTGAAGCATTTGGAATCGATGGAGGGAGAAACGACAAACGACCAAAGGGAAACAGCTAATGGATTCAAGGAACAACCACAAGAAACAGAGCAAGCTGAAGCGAGCATAAACAAACAATTTCAGAAGTTAAACCTGACGGCTGATGAAAAAAGGAAAGTCTTGGGAATGGAAGACGATGAGCTAAAAAGAAAAGTGGAAGATCTGGAGCACATAGCTGTCTGCAAAATACTTACTGAAAAACACATTAATCCGGAATTCTTTAAGAATATGATGCCCAGAATTTGGAACATTGAAGGAAGGGTCAACATCAAAAAGGTAGGGGAGAATATGTACACATCTTTCTGGGTTCATTTTATTGACCTACCAAGAATCTGTCTAAACAGAAAATGGGCTGAAGACTTGGGAAACACGGTGGGATCCTTTGAAAAATTTGACCTGGATGATCTAGAAAGGGAAGGAAGCGGGTCTTTAAGAGTACGAGTAAGATTTGATATTACTCAACCTCTGAGACGAGGAGCTATGATAAGAATCGGCACCAAAAGGGAAGAAGAGTGGATAGATATGAGATATGAAAAACTCCCTGATTTCTGTTACGGCTGCGGGCGAGTACGACACTTAGCAAGAGAATGTGACGATGATGAAGCTCTTAAAGCAGAGAAGTTGGAATATGGAGAATGGTTACAGAAAGCTCCCAGTATTAAAGGAAAATTCAAAGGCCATAAAGAAATGGGGAAGAAGGAAACAGAGAAAACCAGAGCATCAAGGACAAAAGAAAAAGGAAAAAAGGAAGAGGCAAGCAGTTACAACCAGCACCGCCGGCCGGAAGAGTCGCCGGAGAAGAAAGAGACGAGGGAAACAGGGAAGGAAAGGAAAACGACAAAGGCAACGGCTAGTTCAGAAAACATAGAAACCAGAGACATAATGATTACGGATCAAACCCCAAAAACGGCAGCTGACAGCTCTAAGGCAAAAGGAAAAGAAAGGATGACAGAGGTTGAGATGTACTCTGTACCTGCTATGGAAACAGACGACAAAGCCCATTACAAAATAAAAAAACAAAATCAAGGGCCCAAACCTGAACTAAGTCTCTGTGAGGATTTGGGCCAAGGAAGAAAAGGTGACCAGAAAAAAGAAATAATGTATCCAGATATGGAGAAGGCCATCCAAAACAGCAACATGGAAATGAAATACATTGGAAGCTCAGAGAAGTATGAAGAAGTCAACCTACAGACAAGAATGAATATACAAACAGCAGCGAAGAAAAGTGGAAAATCTTGGAAACGAAGGGCAAGGGAAGATCAAACACACAGGACAGTGGGAAAGGAGGATGAAAAACTGATAAGTAAAGGGAAGCATGAGAGAGAAAACCAAGAGGAGGATAAAGAAAGAAATAGGCTATGTTCAAATTACTTCGGGTCAACCGTTGGGATATCGGCGGGAGCTGTGGATCAGCCCCGCCGGACGCCATGA

Protein sequence

MSKFRRNGGKIETSPLGNVDMVDIPTFRWKCRYVDGNLIPWVVYQWGFSLKHLESMEGETTNDQRETANGFKEQPQETEQAEASINKQFQKLNLTADEKRKVLGMEDDELKRKVEDLEHIAVCKILTEKHINPEFFKNMMPRIWNIEGRVNIKKVGENMYTSFWVHFIDLPRICLNRKWAEDLGNTVGSFEKFDLDDLEREGSGSLRVRVRFDITQPLRRGAMIRIGTKREEEWIDMRYEKLPDFCYGCGRVRHLARECDDDEALKAEKLEYGEWLQKAPSIKGKFKGHKEMGKKETEKTRASRTKEKGKKEEASSYNQHRRPEESPEKKETRETGKERKTTKATASSENIETRDIMITDQTPKTAADSSKAKGKERMTEVEMYSVPAMETDDKAHYKIKKQNQGPKPELSLCEDLGQGRKGDQKKEIMYPDMEKAIQNSNMEMKYIGSSEKYEEVNLQTRMNIQTAAKKSGKSWKRRAREDQTHRTVGKEDEKLISKGKHERENQEEDKERNRLCSNYFGSTVGISAGAVDQPRRTP

Homology

[Close]

BLAST of Lag0005725 vs. NCBI nr
Match: TXG73661.1 (hypothetical protein EZV62_002240 [Acer yangbiense])

HSP 1 Score: 120.9 bits (302), Expect = 3.3e-23
Identity = 74/232 (31.90%), Postives = 131/232 (56.47%), Query Frame = 0


Query: 81  AEASINKQFQKLNLTADEKRKVLGMEDDELKRKVEDLEHIAVCKILTEKHINPEFFKNMM 140
           +EA I K ++ L+L ADE   V  M ++     VED+E   V K+L EK +N + FK ++
Sbjct: 2   SEAEIAKLYENLSL-ADEDVAVHEMAEEVKIDGVEDVERCLVGKVLAEKKVNRDAFKGLI 61

Query: 141 PRIWNIEGRVNIKKVGENMYTSFWVHFIDLPRICLNRKWAEDLGNTVGSFEKFDLDDLER 200
            +IWN  G V I+ VG+N++  ++++  D  ++     W    GN++   EK        
Sbjct: 62  EQIWNPFGHVEIELVGDNIFMFYFINSEDRNKVWHRGPW--HFGNSLIVLEK-------P 121

Query: 201 EGSGS-LRVRVRFDITQPLRRGAMIRIGTKREEEWIDMRYEKLPDFCYGCGRVRHLAREC 260
            G+   +RV VR DI++PL+R   +++G   E   ++++YE+LP+FC+ CGR+ H  + C
Sbjct: 122 AGTWKFIRVNVRIDISKPLKRWLKLKLGKTEEVTRVNLKYERLPEFCFTCGRIGHGIKGC 181

Query: 261 DDDE----ALKAEKLEYGEWLQKAPSIKGKFKGHKEMGKKETEKTRASRTKE 308
            D+E    AL+    ++G WL+   S + K +G+ +     +++TR S+ ++
Sbjct: 182 MDEEARKTALEGSPNKFGSWLKATISDRSKLRGNVQAYGSSSDRTRISKFEQ 223

[Close]

BLAST of Lag0005725 vs. NCBI nr
Match: TXG61030.1 (hypothetical protein EZV62_012393 [Acer yangbiense])

HSP 1 Score: 120.9 bits (302), Expect = 3.3e-23
Identity = 79/238 (33.19%), Postives = 132/238 (55.46%), Query Frame = 0


Query: 85  INKQFQKLNLTADEKRKVLGMEDDELKRKVEDLEHIAVCKILTEKHINPEFFKNMMPRIW 144
           I K ++ L+L A+E   VL M ++     +ED++   V K+L+ K +N E FK ++ +IW
Sbjct: 6   IEKLYESLSL-AEEDNVVLEMSNESSIDGIEDMDRCLVGKVLSGKKVNREAFKGLIEQIW 65

Query: 145 NIEGRV--------------NIKKVGENMYTSFWVHFIDLPRICLNRKWAEDLGNTVGSF 204
           +  G+V              NI K+G N    FW+   D+P +C+NR+ A+ L   +G  
Sbjct: 66  SPFGQVEVNLISLEKPVGLGNIAKLGFNK-AEFWIQIHDIPILCMNRRTAKWLAEQLG-- 125

Query: 205 EKFDLDDLEREGSGS-LRVRVRFDITQPLRRGAMIRIGTKREEEWIDMRYEKLPDFCYGC 264
           E  ++    RE  G  +RV+V  DI++PL+R    ++GT  E   + ++YE+LP+FC+ C
Sbjct: 126 EVVEIPSESRECWGKFMRVKVSIDISKPLKRWLRFKLGTIDEIIMVGLKYERLPNFCFAC 185

Query: 265 GRVRHLARECDDDEALKA----EKLEYGEWLQKAPSI-KGKFKGHKEMGKKETEKTRA 303
           GR+ +  +EC D+ A KA        YG WL KAP + KGK +   ++    ++++R+
Sbjct: 186 GRIGNGIKECMDEAARKATLDGSPTRYGSWL-KAPILEKGKSRFSSQVFGSSSDRSRS 238

[Close]

BLAST of Lag0005725 vs. NCBI nr
Match: TXG60307.1 (hypothetical protein EZV62_014880 [Acer yangbiense])

HSP 1 Score: 120.2 bits (300), Expect = 5.6e-23
Identity = 82/254 (32.28%), Postives = 129/254 (50.79%), Query Frame = 0


Query: 82  EASINKQFQKLNLTADEKRKVLGMEDDELKRKVEDLEHIAVCKILTEKHINPEFFKNMMP 141
           EA I K ++ L++ ADE   +  M +   +   ED+E   V K+L  K +N E FK ++ 
Sbjct: 3   EADITKLYENLSI-ADEDVAIHEMSEATGEDGAEDVERCLVGKVLAGKKVNREAFKRIIE 62

Query: 142 RIWNIEGRVNIKKVGENMY-------------------TSFWVHFIDLPRICLNRKWAED 201
           +IW+  G V I+ V +N++                     FWV   ++P +C+NRK  + 
Sbjct: 63  QIWSPFGHVEIELVSDNVFMFYFINIGSGNIAQLAFNKADFWVQIHEIPILCMNRKTEKW 122

Query: 202 LGNTVGSFEKFDLDDLERE-GSGSLRVRVRFDITQPLRRGAMIRIGTKREEEWIDMRYEK 261
           L   +G  E  D+    RE     +RV+VR DIT+PL+R   +++G   E   + ++YE+
Sbjct: 123 LAEQIG--EVVDIPSESRECWEKYMRVKVRIDITKPLKRWLRLKLGKTEEVTRVSLKYER 182

Query: 262 LPDFCYGCGRVRHLARECDDDEALKAEKLEY----GEWLQKAPSIKGKFKGHKEMGKKET 309
           LP+FC+ CG++ H  + C D+EA K     Y    G WL+     K K KG  +     +
Sbjct: 183 LPEFCFACGKIGHGIKVCIDEEARKMAVEGYLNMFGSWLKAPVLEKSKSKGVGQGIASSS 242

[Close]

BLAST of Lag0005725 vs. NCBI nr
Match: TXG72599.1 (hypothetical protein EZV62_001178 [Acer yangbiense])

HSP 1 Score: 117.5 bits (293), Expect = 3.6e-22
Identity = 70/227 (30.84%), Postives = 115/227 (50.66%), Query Frame = 0


Query: 85  INKQFQKLNLTADEKRKVLGMEDDELKRKVEDLEHIAVCKILTEKHINPEFFKNMMPRIW 144
           I K ++ ++L ADE   VL M ++ +    ED++   V K+LT K IN E FK ++ +IW
Sbjct: 6   IEKLYKSMSL-ADEDGAVLEMTEEVVVDGKEDIDQCLVGKVLTGKKINREAFKGLIEQIW 65

Query: 145 NIEGRVNIKKVGENMY-------------------------------------------- 204
           +  G+V ++ VG+N++                                            
Sbjct: 66  SPYGQVEVELVGDNVFMFYFINRADRDRVWRRGPWHFGNSLISLEKTSGLGNVANIEFNR 125

Query: 205 TSFWVHFIDLPRICLNRKWAEDLGNTVGSFEKFDLDDLEREGSGS-LRVRVRFDITQPLR 264
             FW+   D+P +C+NR+ A  L   +G  E  ++    RE  G+ LRV+VR DI++PL+
Sbjct: 126 ADFWIQIHDIPILCMNRRTARWLAEQIG--EVVEILSESRECWGNFLRVKVRIDISKPLK 185

Query: 265 RGAMIRIGTKREEEWIDMRYEKLPDFCYGCGRVRHLARECDDDEALK 267
           R   +++G  +E   + ++YE+LP+FCY CGR+ H  +EC D+ A K
Sbjct: 186 RWLRLKLGASKEIIVVGLKYERLPEFCYACGRIGHGIKECGDEVARK 229

[Close]

BLAST of Lag0005725 vs. NCBI nr
Match: TXG73180.1 (hypothetical protein EZV62_001759 [Acer yangbiense])

HSP 1 Score: 114.8 bits (286), Expect = 2.4e-21
Identity = 77/254 (30.31%), Postives = 129/254 (50.79%), Query Frame = 0


Query: 96  ADEKRKVLGMEDDELKRKVEDLEHIAVCKILTEKHINPEFFKNMMPRIWNIEGRVNIK-- 155
           ADE   +L + ++      ED++   V ++L+ K +N E FK+++ ++WN  G V I+  
Sbjct: 16  ADEDGALLEVIEEAELEGEEDVDRSLVGRVLSGKKVNREAFKSLIDQLWNPFGNVEIELA 75

Query: 156 -----------------------KVGENMYTSFWVHFIDLPRICLNRKWAEDLGNTVGSF 215
                                  K+G N    FWV   D+P +C+NR+ A+ L   +G+ 
Sbjct: 76  RGPWHFGRSLIVLEKPMGFRDVSKLGFNK-AEFWVQIHDIPIMCMNRRTAKWLAEQIGAV 135

Query: 216 EKFDLDDLEREGSGSLRVRVRFDITQPLRRGAMIRIGTKREEEWIDMRYEKLPDFCYGCG 275
            +   D  E  G   +RV+V  DI++PL+R   +++    E   + ++YE+LPDFCY CG
Sbjct: 136 VELPADSRECWGR-FMRVKVLIDISRPLKRWLRLKLSKSDEIAVVGLKYERLPDFCYACG 195

Query: 276 RVRHLARECDDDE----ALKAEKLEYGEWLQKAPSIKGKFKGHKEMGKKETEKTRASRTK 321
           RV H+ +EC D+E    AL     +YG+WL KAP ++ +    K   + +   + + R K
Sbjct: 196 RVGHVLKECTDEEAKQGALDGSPTKYGQWL-KAPGVEKE----KSRFQAQISGSSSERDK 255

[Close]

BLAST of Lag0005725 vs. ExPASy TrEMBL
Match: A0A5C7HVR6 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_012393 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.6e-23
Identity = 79/238 (33.19%), Postives = 132/238 (55.46%), Query Frame = 0


Query: 85  INKQFQKLNLTADEKRKVLGMEDDELKRKVEDLEHIAVCKILTEKHINPEFFKNMMPRIW 144
           I K ++ L+L A+E   VL M ++     +ED++   V K+L+ K +N E FK ++ +IW
Sbjct: 6   IEKLYESLSL-AEEDNVVLEMSNESSIDGIEDMDRCLVGKVLSGKKVNREAFKGLIEQIW 65

Query: 145 NIEGRV--------------NIKKVGENMYTSFWVHFIDLPRICLNRKWAEDLGNTVGSF 204
           +  G+V              NI K+G N    FW+   D+P +C+NR+ A+ L   +G  
Sbjct: 66  SPFGQVEVNLISLEKPVGLGNIAKLGFNK-AEFWIQIHDIPILCMNRRTAKWLAEQLG-- 125

Query: 205 EKFDLDDLEREGSGS-LRVRVRFDITQPLRRGAMIRIGTKREEEWIDMRYEKLPDFCYGC 264
           E  ++    RE  G  +RV+V  DI++PL+R    ++GT  E   + ++YE+LP+FC+ C
Sbjct: 126 EVVEIPSESRECWGKFMRVKVSIDISKPLKRWLRFKLGTIDEIIMVGLKYERLPNFCFAC 185

Query: 265 GRVRHLARECDDDEALKA----EKLEYGEWLQKAPSI-KGKFKGHKEMGKKETEKTRA 303
           GR+ +  +EC D+ A KA        YG WL KAP + KGK +   ++    ++++R+
Sbjct: 186 GRIGNGIKECMDEAARKATLDGSPTRYGSWL-KAPILEKGKSRFSSQVFGSSSDRSRS 238

[Close]

BLAST of Lag0005725 vs. ExPASy TrEMBL
Match: A0A5C7IWJ4 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_002240 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.6e-23
Identity = 74/232 (31.90%), Postives = 131/232 (56.47%), Query Frame = 0


Query: 81  AEASINKQFQKLNLTADEKRKVLGMEDDELKRKVEDLEHIAVCKILTEKHINPEFFKNMM 140
           +EA I K ++ L+L ADE   V  M ++     VED+E   V K+L EK +N + FK ++
Sbjct: 2   SEAEIAKLYENLSL-ADEDVAVHEMAEEVKIDGVEDVERCLVGKVLAEKKVNRDAFKGLI 61

Query: 141 PRIWNIEGRVNIKKVGENMYTSFWVHFIDLPRICLNRKWAEDLGNTVGSFEKFDLDDLER 200
            +IWN  G V I+ VG+N++  ++++  D  ++     W    GN++   EK        
Sbjct: 62  EQIWNPFGHVEIELVGDNIFMFYFINSEDRNKVWHRGPW--HFGNSLIVLEK-------P 121

Query: 201 EGSGS-LRVRVRFDITQPLRRGAMIRIGTKREEEWIDMRYEKLPDFCYGCGRVRHLAREC 260
            G+   +RV VR DI++PL+R   +++G   E   ++++YE+LP+FC+ CGR+ H  + C
Sbjct: 122 AGTWKFIRVNVRIDISKPLKRWLKLKLGKTEEVTRVNLKYERLPEFCFTCGRIGHGIKGC 181

Query: 261 DDDE----ALKAEKLEYGEWLQKAPSIKGKFKGHKEMGKKETEKTRASRTKE 308
            D+E    AL+    ++G WL+   S + K +G+ +     +++TR S+ ++
Sbjct: 182 MDEEARKTALEGSPNKFGSWLKATISDRSKLRGNVQAYGSSSDRTRISKFEQ 223

[Close]

BLAST of Lag0005725 vs. ExPASy TrEMBL
Match: A0A5C7HT75 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_014880 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.7e-23
Identity = 82/254 (32.28%), Postives = 129/254 (50.79%), Query Frame = 0


Query: 82  EASINKQFQKLNLTADEKRKVLGMEDDELKRKVEDLEHIAVCKILTEKHINPEFFKNMMP 141
           EA I K ++ L++ ADE   +  M +   +   ED+E   V K+L  K +N E FK ++ 
Sbjct: 3   EADITKLYENLSI-ADEDVAIHEMSEATGEDGAEDVERCLVGKVLAGKKVNREAFKRIIE 62

Query: 142 RIWNIEGRVNIKKVGENMY-------------------TSFWVHFIDLPRICLNRKWAED 201
           +IW+  G V I+ V +N++                     FWV   ++P +C+NRK  + 
Sbjct: 63  QIWSPFGHVEIELVSDNVFMFYFINIGSGNIAQLAFNKADFWVQIHEIPILCMNRKTEKW 122

Query: 202 LGNTVGSFEKFDLDDLERE-GSGSLRVRVRFDITQPLRRGAMIRIGTKREEEWIDMRYEK 261
           L   +G  E  D+    RE     +RV+VR DIT+PL+R   +++G   E   + ++YE+
Sbjct: 123 LAEQIG--EVVDIPSESRECWEKYMRVKVRIDITKPLKRWLRLKLGKTEEVTRVSLKYER 182

Query: 262 LPDFCYGCGRVRHLARECDDDEALKAEKLEY----GEWLQKAPSIKGKFKGHKEMGKKET 309
           LP+FC+ CG++ H  + C D+EA K     Y    G WL+     K K KG  +     +
Sbjct: 183 LPEFCFACGKIGHGIKVCIDEEARKMAVEGYLNMFGSWLKAPVLEKSKSKGVGQGIASSS 242

[Close]

BLAST of Lag0005725 vs. ExPASy TrEMBL
Match: A0A5C7IV30 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_001759 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 1.1e-21
Identity = 77/254 (30.31%), Postives = 129/254 (50.79%), Query Frame = 0


Query: 96  ADEKRKVLGMEDDELKRKVEDLEHIAVCKILTEKHINPEFFKNMMPRIWNIEGRVNIK-- 155
           ADE   +L + ++      ED++   V ++L+ K +N E FK+++ ++WN  G V I+  
Sbjct: 16  ADEDGALLEVIEEAELEGEEDVDRSLVGRVLSGKKVNREAFKSLIDQLWNPFGNVEIELA 75

Query: 156 -----------------------KVGENMYTSFWVHFIDLPRICLNRKWAEDLGNTVGSF 215
                                  K+G N    FWV   D+P +C+NR+ A+ L   +G+ 
Sbjct: 76  RGPWHFGRSLIVLEKPMGFRDVSKLGFNK-AEFWVQIHDIPIMCMNRRTAKWLAEQIGAV 135

Query: 216 EKFDLDDLEREGSGSLRVRVRFDITQPLRRGAMIRIGTKREEEWIDMRYEKLPDFCYGCG 275
            +   D  E  G   +RV+V  DI++PL+R   +++    E   + ++YE+LPDFCY CG
Sbjct: 136 VELPADSRECWGR-FMRVKVLIDISRPLKRWLRLKLSKSDEIAVVGLKYERLPDFCYACG 195

Query: 276 RVRHLARECDDDE----ALKAEKLEYGEWLQKAPSIKGKFKGHKEMGKKETEKTRASRTK 321
           RV H+ +EC D+E    AL     +YG+WL KAP ++ +    K   + +   + + R K
Sbjct: 196 RVGHVLKECTDEEAKQGALDGSPTKYGQWL-KAPGVEKE----KSRFQAQISGSSSERDK 255

[Close]

BLAST of Lag0005725 vs. ExPASy TrEMBL
Match: A0A5C7GU64 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_027487 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.9e-21
Identity = 87/318 (27.36%), Postives = 149/318 (46.86%), Query Frame = 0


Query: 81  AEASINKQFQKLNLTADEKRKVLGMEDDELKRKVEDLEHIAVCKILTEKHINPEFFKNMM 140
           +EA I + ++ L+L  DE   V  + +D ++   ED++   V K+LT K +N E FK ++
Sbjct: 2   SEAEITQLYENLSL-EDEDAAVHEITEDYIQDGDEDVDRCLVGKVLTGKKVNREAFKGLI 61

Query: 141 PRIWNIEGRVNIKKVGENMY---------------------------------------- 200
            +IWN  G+V ++ VGEN +                                        
Sbjct: 62  EQIWNQFGQVEVELVGENTFMFHFTNKEYRNKVWNRGPWLFGKSLIVLEKPKGPGDITKL 121

Query: 201 ----TSFWVHFIDLPRICLNRKWAEDLGNTVGSFEKFDLDDLEREGSGSLRVRVRFDITQ 260
                 FWV   D+P +C+N++  + L   +G   +   +  E  G   +RV+V+ DIT+
Sbjct: 122 KFNQADFWVQIHDIPIMCMNQRTTKWLAEYIGEVVEIPTESRECWGK-YVRVKVQVDITK 181

Query: 261 PLRRGAMIRIGTKREEEWIDMRYEKLPDFCYGCGRVRHLARECDDDEALKA----EKLEY 320
           PL+R   I++G   E   + ++YE+LPDFC+ CGR+ H  REC D++A +A    ++ ++
Sbjct: 182 PLKRWLRIKLGKYEEITMVALKYERLPDFCFACGRIGHSVRECLDEDAKRAALDGQQTKF 241

Query: 321 GEWLQKAPSIKGKFKGHKEMGKKETEKTRASRTKEKGKKEEASSYNQHRRPEESPEKKET 351
           G W++  P  K K K         +E+    R+ E  ++ E       R    +P+K  +
Sbjct: 242 GSWMRATPIDKSKTKSISLTTGSSSER---GRSVEGSRELEGDGSLSMRSGNVAPQK--S 301

[Close]

BLAST of Lag0005725 vs. TAIR 10
Match: AT5G36228.1 (nucleic acid binding;zinc ion binding )

HSP 1 Score: 61.2 bits (147), Expect = 2.9e-09
Identity = 31/100 (31.00%), Postives = 46/100 (46.00%), Query Frame = 0


Query: 160 YTSFWVHFIDLPRICLNRKWAEDLGNTVGSFEKFDLDDLEREGSGSLRVRVRFDITQPLR 219
           +   WVH   +P   ++ +  E + +T+G     D ++        +RV+VR D T+PLR
Sbjct: 120 FIDVWVHIRGIPLPYVSERTVEIIASTLGEVVAMDFNEETTSQITFIRVKVRMDFTEPLR 179

Query: 220 RGAMIRIGTKREEEWIDMRYEKLPDFCYGCGRVRHLAREC 260
               +R  + RE   I   YEKL   C  C RV H    C
Sbjct: 180 FFRRVRFAS-RERAMIGFEYEKLQRVCTNCCRVNHQVSHC 218

[Close]

BLAST of Lag0005725 vs. TAIR 10
Match: AT2G13450.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02000.1); Has 247 Blast hits to 243 proteins in 13 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 2; Plants - 243; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.4 bits (111), Expect = 4.3e-05
Identity = 28/96 (29.17%), Postives = 41/96 (42.71%), Query Frame = 0


Query: 164 WVHFIDLPRICLNRKWAEDLGNTVGSFEKFDLDDLEREGSGSLRVRVRFDITQPLRRGAM 223
           WV    +P + +  + A ++ + +G     D  D        +RVR+RF IT  LR    
Sbjct: 124 WVQMRGIPLLYVCEETALEIAHELGEIITLDFHDSTTTQIAYIRVRIRFGITDRLRFFLR 183

Query: 224 IRIGTKREEEWIDMRYEKLPDFCYGCGRVRHLAREC 260
           I I    E   I  +YE+L   C  C R+ H    C
Sbjct: 184 I-IFDSGETALISFQYERLRRICSSCFRMTHHRNSC 218

[Close]

BLAST of Lag0005725 vs. TAIR 10
Match: AT4G02000.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G13450.1); Has 165 Blast hits to 161 proteins in 11 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 2; Plants - 161; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 46.2 bits (108), Expect = 9.6e-05
Identity = 28/96 (29.17%), Postives = 41/96 (42.71%), Query Frame = 0


Query: 164 WVHFIDLPRICLNRKWAEDLGNTVGSFEKFDLDDLEREGSGSLRVRVRFDITQPLRRGAM 223
           WV    +P + +  + A ++ + +G     D  D        +RVR+RF IT  LR    
Sbjct: 44  WVQMRGIPLLYVCEETALEIAHELGKILTLDFHDSTTTQIAYIRVRIRFGITDRLRFFQR 103

Query: 224 IRIGTKREEEWIDMRYEKLPDFCYGCGRVRHLAREC 260
           I I    E   I  +YE+L   C  C R+ H    C
Sbjct: 104 I-IFDFGEAALISFQYERLRRICSSCFRMTHHRNSC 138

[Close]

BLAST of Lag0005725 vs. TAIR 10
Match: AT3G47920.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41590.1); Has 154 Blast hits to 152 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 154; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 45.4 bits (106), Expect = 1.6e-04
Identity = 28/96 (29.17%), Postives = 40/96 (41.67%), Query Frame = 0


Query: 164 WVHFIDLPRICLNRKWAEDLGNTVGSFEKFDLDDLEREGSGSLRVRVRFDITQPLRRGAM 223
           WV    +P + +  + A ++ + +G     D  D        +RVRVR  IT  LR    
Sbjct: 53  WVQMRGIPLLYVCEETALEIAHEIGEIITLDFHDATMTQIAYIRVRVRIGITDRLRFFQR 112

Query: 224 IRIGTKREEEWIDMRYEKLPDFCYGCGRVRHLAREC 260
           I   +  E   I  +YE+L   C  C RV H    C
Sbjct: 113 ITFDS-GETALIRFQYERLRRICSSCFRVTHHRNYC 147

[Close]

BLAST of Lag0005725 vs. TAIR 10
Match: AT2G17920.1 (nucleic acid binding;zinc ion binding )

HSP 1 Score: 45.1 bits (105), Expect = 2.1e-04
Identity = 27/96 (28.12%), Postives = 39/96 (40.62%), Query Frame = 0


Query: 164 WVHFIDLPRICLNRKWAEDLGNTVGSFEKFDLDDLEREGSGSLRVRVRFDITQPLRRGAM 223
           WV    +P + ++ + A ++   +G+    D  D        +RVRVR  IT  LR    
Sbjct: 124 WVQMRGIPFLYVSEETALEIAQEIGAIISLDFHDTTSTQIAYIRVRVRVGITDSLRFFQR 183

Query: 224 IRIGTKREEEWIDMRYEKLPDFCYGCGRVRHLAREC 260
           I      E   I  +YE+L   C  C R  H    C
Sbjct: 184 ITF-ESGESALIRFQYERLRRICSNCFRFTHNRNYC 218

The following BLAST results are available for this feature:

BLAST of Lag0005725 vs. NCBI nr


Match Name	E-value	Identity	Description
TXG73661.1	3.3e-23	31.90	hypothetical protein EZV62_002240 [Acer yangbiense]	[more]
TXG61030.1	3.3e-23	33.19	hypothetical protein EZV62_012393 [Acer yangbiense]	[more]
TXG60307.1	5.6e-23	32.28	hypothetical protein EZV62_014880 [Acer yangbiense]	[more]
TXG72599.1	3.6e-22	30.84	hypothetical protein EZV62_001178 [Acer yangbiense]	[more]
TXG73180.1	2.4e-21	30.31	hypothetical protein EZV62_001759 [Acer yangbiense]	[more]

BLAST of Lag0005725 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0005725 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5C7HVR6	1.6e-23	33.19	Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_012393 PE=4 SV=1	[more]
A0A5C7IWJ4	1.6e-23	31.90	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_00224...	[more]
A0A5C7HT75	2.7e-23	32.28	Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_014880 PE=4 SV=1	[more]
A0A5C7IV30	1.1e-21	30.31	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_00175...	[more]
A0A5C7GU64	1.9e-21	27.36	CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_02748...	[more]

BLAST of Lag0005725 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G36228.1	2.9e-09	31.00	nucleic acid binding;zinc ion binding	[more]
AT2G13450.1	4.3e-05	29.17	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT4G02000.1	9.6e-05	29.17	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G47920.1	1.6e-04	29.17	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G17920.1	2.1e-04	28.13	nucleic acid binding;zinc ion binding	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025836	Zinc knuckle CX2CX4HX4C	PFAM	PF14392	zf-CCHC_4	coord: 212..260 e-value: 1.2E-13 score: 50.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 283..424
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 467..516
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 346..368
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 387..403
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 284..345
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 475..515
None	No IPR available	PANTHER	PTHR31286:SF84	SUBFAMILY NOT NAMED	coord: 161..326
IPR040256	Uncharacterized protein At4g02000-like	PANTHER	PTHR31286	GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKE	coord: 161..326
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 246..259 score: 9.00989

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0005725.1	Lag0005725.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding