Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCATGGCGGTGGTGAGAGGCAAGATGGTCAGTTTTTCTTCTGTTGACATCAACAGGGTGTACAAGATCAAAACACCCTTACGTCTAAGAGGGAAGGATGCCATCAAGAACCCCTCGGCCAAGCAGATGAAAGAAGCATTGAAATTAGTGGCCAACAAAGGTGTTCAGTGGAAGGAGTCCCATACAAAGGTGAAGACATTAGTGCCAAGCGATCTCAAGCCAGAATTGGCAATATGGCTTCACTTTATCAAGAACAGGTTGATGCCAACAACCCACGATAGCACCATTTCAGTAGAGAGAGTTATGTTCCTCTACAGTATCATGAAGGGGTTGGAGATAAACATTGAGACCATCATCAGAGAAGAGATCCTTTCATGTGGAAGGAAGAAAATAGAGAAGCTGTTATTTGGGTCACTGATTACCCAATTGTGTCAGAGGGTGAAGATAGTTCCTAGAAATGATGAGGAACGTCACTTATTCAAGCCAACCATTGATCTACCTCTGATTGGGAAGCTTCAACATAACAACGCCCAAAGAAAAGACAAAGCTTCCACTTCCCAAGCTACACCACCACTGAGGCTGACACCTGTTTCACCTCCTCAACACACTCCTATTTCAGAGCCCACATCTGTTGGGTTTTATGCCCTAAAACTCGTAGATAGTAAATGA
mRNA sequence
ATGATCATGGCGGTGGTGAGAGGCAAGATGGTCAGTTTTTCTTCTGTTGACATCAACAGGGTGTACAAGATCAAAACACCCTTACGTCTAAGAGGGAAGGATGCCATCAAGAACCCCTCGGCCAAGCAGATGAAAGAAGCATTGAAATTAGTGGCCAACAAAGGTGTTCAGTGGAAGGAGTCCCATACAAAGGTGAAGACATTAGTGCCAAGCGATCTCAAGCCAGAATTGGCAATATGGCTTCACTTTATCAAGAACAGGTTGATGCCAACAACCCACGATAGCACCATTTCAGTAGAGAGAGTTATGTTCCTCTACAGTATCATGAAGGGGTTGGAGATAAACATTGAGACCATCATCAGAGAAGAGATCCTTTCATGTGGAAGGAAGAAAATAGAGAAGCTGTTATTTGGGTCACTGATTACCCAATTGTGTCAGAGGGTGAAGATAGTTCCTAGAAATGATGAGGAACGTCACTTATTCAAGCCAACCATTGATCTACCTCTGATTGGGAAGCTTCAACATAACAACGCCCAAAGAAAAGACAAAGCTTCCACTTCCCAAGCTACACCACCACTGAGGCTGACACCTGTTTCACCTCCTCAACACACTCCTATTTCAGAGCCCACATCTGTTGGGTTTTATGCCCTAAAACTCGTAGATAGTAAATGA
Coding sequence (CDS)
ATGATCATGGCGGTGGTGAGAGGCAAGATGGTCAGTTTTTCTTCTGTTGACATCAACAGGGTGTACAAGATCAAAACACCCTTACGTCTAAGAGGGAAGGATGCCATCAAGAACCCCTCGGCCAAGCAGATGAAAGAAGCATTGAAATTAGTGGCCAACAAAGGTGTTCAGTGGAAGGAGTCCCATACAAAGGTGAAGACATTAGTGCCAAGCGATCTCAAGCCAGAATTGGCAATATGGCTTCACTTTATCAAGAACAGGTTGATGCCAACAACCCACGATAGCACCATTTCAGTAGAGAGAGTTATGTTCCTCTACAGTATCATGAAGGGGTTGGAGATAAACATTGAGACCATCATCAGAGAAGAGATCCTTTCATGTGGAAGGAAGAAAATAGAGAAGCTGTTATTTGGGTCACTGATTACCCAATTGTGTCAGAGGGTGAAGATAGTTCCTAGAAATGATGAGGAACGTCACTTATTCAAGCCAACCATTGATCTACCTCTGATTGGGAAGCTTCAACATAACAACGCCCAAAGAAAAGACAAAGCTTCCACTTCCCAAGCTACACCACCACTGAGGCTGACACCTGTTTCACCTCCTCAACACACTCCTATTTCAGAGCCCACATCTGTTGGGTTTTATGCCCTAAAACTCGTAGATAGTAAATGA
Protein sequence
MIMAVVRGKMVSFSSVDINRVYKIKTPLRLRGKDAIKNPSAKQMKEALKLVANKGVQWKESHTKVKTLVPSDLKPELAIWLHFIKNRLMPTTHDSTISVERVMFLYSIMKGLEINIETIIREEILSCGRKKIEKLLFGSLITQLCQRVKIVPRNDEERHLFKPTIDLPLIGKLQHNNAQRKDKASTSQATPPLRLTPVSPPQHTPISEPTSVGFYALKLVDSK
Homology
BLAST of Lag0005389 vs. NCBI nr
Match:
PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])
HSP 1 Score: 101.3 bits (251), Expect = 1.1e-17
Identity = 62/183 (33.88%), Postives = 97/183 (53.01%), Query Frame = 0
Query: 6 VRGKMVSFSSVDINRVYKIKTPLRLRGKDAIKNPSAKQMKEALKLVANKGVQWKESHTKV 65
VRG VS+S IN V+ + P+ + I+N + + + L+ VA G +W S
Sbjct: 104 VRGVQVSWSEEAINAVFGLGDPVD-EHSEFIQNITQQDLITVLETVAAAGAEWNVSAQGA 163
Query: 66 KTLVPSDLKPELAIWLHFIKNRLMPTTHDSTISVERVMFLYSIMKGLEINIETIIREEIL 125
T + S L P +W HF+K+RL+PTTH T+S +R++ L+S++ G IN+ +I EI
Sbjct: 164 YTCIRSALTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIR 223
Query: 126 SCGRKKIEKLLFGSLITQLCQRVKIVPRNDEERHLFKPTIDLPLIGKLQHNNAQRKDKAS 185
+C +K L F SLIT+LC+ + +EE+ ID + ++ AQ S
Sbjct: 224 ACAARKTGALFFPSLITRLCRNARAPFLVNEEKLHNTGEIDAIAVARI----AQEGPTES 281
Query: 186 TSQ 189
T Q
Sbjct: 284 TQQ 281
BLAST of Lag0005389 vs. NCBI nr
Match:
PON62892.1 (hypothetical protein PanWU01x14_135680 [Parasponia andersonii])
HSP 1 Score: 100.9 bits (250), Expect = 1.5e-17
Identity = 63/186 (33.87%), Postives = 97/186 (52.15%), Query Frame = 0
Query: 6 VRGKMVSFSSVDINRVYKIKTPLRLRGK--DAIKNPSAKQMKEALKLVANKGVQWKESHT 65
VRG V S+ IN +Y + P+ + +AI P ++ L+ VA G +W S
Sbjct: 11 VRGVQVPLSTEAINTIYGLGDPVDEHSEFVEAITEP---ELATVLETVAIAGAEWNVSSQ 70
Query: 66 KVKTLVPSDLKPELAIWLHFIKNRLMPTTHDSTISVERVMFLYSIMKGLEINIETIIREE 125
T + S L P +W HF+K+RL+PTTH T+S ERV+ LYS++ G IN+ II E
Sbjct: 71 GAYTCLRSSLNPPAKVWYHFLKSRLLPTTHGKTVSKERVLLLYSMLTGKSINVGQIIHRE 130
Query: 126 ILSCGRKKIEKLLFGSLITQLCQRVKIVPRNDEERHLFKPTIDLPLIGKL-QHNNAQRKD 185
I + +K L F SLIT++C + +EE+ ID + ++ Q A+
Sbjct: 131 ICAYAARKSGALFFPSLITRMCCNARAPYLVNEEKLHNTGEIDAIAVARIAQEGPAEHSH 190
Query: 186 KASTSQ 189
+ S+S+
Sbjct: 191 RPSSSR 193
BLAST of Lag0005389 vs. NCBI nr
Match:
PON78020.1 (hypothetical protein PanWU01x14_023740 [Parasponia andersonii])
HSP 1 Score: 99.4 bits (246), Expect = 4.2e-17
Identity = 55/154 (35.71%), Postives = 87/154 (56.49%), Query Frame = 0
Query: 6 VRGKMVSFSSVDINRVYKIKTPLRLRGKDAIKNPSAKQMKEALKLVANKGVQWKESHTKV 65
VRG VS+S IN V+ + P+ + I+N + ++ L+ VA G +W S
Sbjct: 34 VRGVQVSWSEEAINAVFGLGDPVD-EHSEFIENITEPELITVLETVAAAGAEWNVSAQGA 93
Query: 66 KTLVPSDLKPELAIWLHFIKNRLMPTTHDSTISVERVMFLYSIMKGLEINIETIIREEIL 125
T + S L P +W HF+K+RL+PTTH +S +R++ L+S++ G IN+ +I EI
Sbjct: 94 YTCIRSALTPAAKVWYHFLKSRLLPTTHGKIVSKDRMLLLHSMLNGKSINVGRMIHSEIR 153
Query: 126 SCGRKKIEKLLFGSLITQLCQRVKIVPRNDEERH 160
+C +K L F SLIT+LC+ + N+E+ H
Sbjct: 154 ACAAQKTGALFFPSLITRLCRNAPFLV-NEEKLH 185
BLAST of Lag0005389 vs. NCBI nr
Match:
PON50458.1 (hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii])
HSP 1 Score: 98.2 bits (243), Expect = 9.4e-17
Identity = 61/186 (32.80%), Postives = 98/186 (52.69%), Query Frame = 0
Query: 6 VRGKMVSFSSVDINRVYKIKTPLRLRGKDAIKNPSAKQMKEALKLVANKGVQWKESHTKV 65
VRG V S+ IN +Y + L + +++ + ++ L+ VA G +W S V
Sbjct: 21 VRGVQVPLSAEAINTIYGL-GDLVDEHSEFVEDITEPELAMVLETVAIAGAEWNVSSQGV 80
Query: 66 KTLVPSDLKPELAIWLHFIKNRLMPTTHDSTISVERVMFLYSIMKGLEINIETIIREEIL 125
T + S L P IW HF+K+RL+PTTH +S ERV+ LYS++ G IN+ +I EI
Sbjct: 81 YTCLRSSLNPPAKIWYHFLKSRLLPTTHGKIVSKERVLLLYSMLTGKSINMGRMIHREIC 140
Query: 126 SCGRKKIEKLLFGSLITQLCQRVKIVPRNDEERHLFKPTIDLPLIGKL-QHNNAQRKDKA 185
+C +K L F SLI ++C+ + +EE+ ID + ++ Q A+ +
Sbjct: 141 ACAARKSGALFFPSLIIRMCRNARAPYLVNEEKLHNTGEIDAIAVARIAQEGPAEPSHQP 200
Query: 186 STSQAT 191
S+S+ T
Sbjct: 201 SSSRPT 205
BLAST of Lag0005389 vs. NCBI nr
Match:
PON35554.1 (hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii])
HSP 1 Score: 97.1 bits (240), Expect = 2.1e-16
Identity = 54/153 (35.29%), Postives = 85/153 (55.56%), Query Frame = 0
Query: 6 VRGKMVSFSSVDINRVYKIKTPLRLRGKDAIKNPSAKQMKEALKLVANKGVQWKESHTKV 65
VRG VS+S IN V+ + P+ + I+N + + L+ VA G +W S
Sbjct: 95 VRGVQVSWSEEAINAVFGLGDPVD-EHSEFIENITEHDLITVLETVAVAGAEWNVSAQGA 154
Query: 66 KTLVPSDLKPELAIWLHFIKNRLMPTTHDSTISVERVMFLYSIMKGLEINIETIIREEIL 125
T + S L P +W HF+K+ L+PTTH T+S +R++ L+S++ G IN+ +I EI
Sbjct: 155 YTCIRSALTPAAKVWFHFLKSHLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIR 214
Query: 126 SCGRKKIEKLLFGSLITQLCQRVKIVPRNDEER 159
+C +K L F SLIT+LC+ + +EE+
Sbjct: 215 ACAARKTGALFFPSLITRLCRNARAPFLVNEEK 246
BLAST of Lag0005389 vs. ExPASy TrEMBL
Match:
A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)
HSP 1 Score: 101.3 bits (251), Expect = 5.4e-18
Identity = 62/183 (33.88%), Postives = 97/183 (53.01%), Query Frame = 0
Query: 6 VRGKMVSFSSVDINRVYKIKTPLRLRGKDAIKNPSAKQMKEALKLVANKGVQWKESHTKV 65
VRG VS+S IN V+ + P+ + I+N + + + L+ VA G +W S
Sbjct: 104 VRGVQVSWSEEAINAVFGLGDPVD-EHSEFIQNITQQDLITVLETVAAAGAEWNVSAQGA 163
Query: 66 KTLVPSDLKPELAIWLHFIKNRLMPTTHDSTISVERVMFLYSIMKGLEINIETIIREEIL 125
T + S L P +W HF+K+RL+PTTH T+S +R++ L+S++ G IN+ +I EI
Sbjct: 164 YTCIRSALTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIR 223
Query: 126 SCGRKKIEKLLFGSLITQLCQRVKIVPRNDEERHLFKPTIDLPLIGKLQHNNAQRKDKAS 185
+C +K L F SLIT+LC+ + +EE+ ID + ++ AQ S
Sbjct: 224 ACAARKTGALFFPSLITRLCRNARAPFLVNEEKLHNTGEIDAIAVARI----AQEGPTES 281
Query: 186 TSQ 189
T Q
Sbjct: 284 TQQ 281
BLAST of Lag0005389 vs. ExPASy TrEMBL
Match:
A0A2P5CPE8 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_135680 PE=4 SV=1)
HSP 1 Score: 100.9 bits (250), Expect = 7.1e-18
Identity = 63/186 (33.87%), Postives = 97/186 (52.15%), Query Frame = 0
Query: 6 VRGKMVSFSSVDINRVYKIKTPLRLRGK--DAIKNPSAKQMKEALKLVANKGVQWKESHT 65
VRG V S+ IN +Y + P+ + +AI P ++ L+ VA G +W S
Sbjct: 11 VRGVQVPLSTEAINTIYGLGDPVDEHSEFVEAITEP---ELATVLETVAIAGAEWNVSSQ 70
Query: 66 KVKTLVPSDLKPELAIWLHFIKNRLMPTTHDSTISVERVMFLYSIMKGLEINIETIIREE 125
T + S L P +W HF+K+RL+PTTH T+S ERV+ LYS++ G IN+ II E
Sbjct: 71 GAYTCLRSSLNPPAKVWYHFLKSRLLPTTHGKTVSKERVLLLYSMLTGKSINVGQIIHRE 130
Query: 126 ILSCGRKKIEKLLFGSLITQLCQRVKIVPRNDEERHLFKPTIDLPLIGKL-QHNNAQRKD 185
I + +K L F SLIT++C + +EE+ ID + ++ Q A+
Sbjct: 131 ICAYAARKSGALFFPSLITRMCCNARAPYLVNEEKLHNTGEIDAIAVARIAQEGPAEHSH 190
Query: 186 KASTSQ 189
+ S+S+
Sbjct: 191 RPSSSR 193
BLAST of Lag0005389 vs. ExPASy TrEMBL
Match:
A0A2P5DXM3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE=4 SV=1)
HSP 1 Score: 99.4 bits (246), Expect = 2.1e-17
Identity = 55/154 (35.71%), Postives = 87/154 (56.49%), Query Frame = 0
Query: 6 VRGKMVSFSSVDINRVYKIKTPLRLRGKDAIKNPSAKQMKEALKLVANKGVQWKESHTKV 65
VRG VS+S IN V+ + P+ + I+N + ++ L+ VA G +W S
Sbjct: 34 VRGVQVSWSEEAINAVFGLGDPVD-EHSEFIENITEPELITVLETVAAAGAEWNVSAQGA 93
Query: 66 KTLVPSDLKPELAIWLHFIKNRLMPTTHDSTISVERVMFLYSIMKGLEINIETIIREEIL 125
T + S L P +W HF+K+RL+PTTH +S +R++ L+S++ G IN+ +I EI
Sbjct: 94 YTCIRSALTPAAKVWYHFLKSRLLPTTHGKIVSKDRMLLLHSMLNGKSINVGRMIHSEIR 153
Query: 126 SCGRKKIEKLLFGSLITQLCQRVKIVPRNDEERH 160
+C +K L F SLIT+LC+ + N+E+ H
Sbjct: 154 ACAAQKTGALFFPSLITRLCRNAPFLV-NEEKLH 185
BLAST of Lag0005389 vs. ExPASy TrEMBL
Match:
A0A2P5BNT0 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_223230 PE=4 SV=1)
HSP 1 Score: 98.2 bits (243), Expect = 4.6e-17
Identity = 61/186 (32.80%), Postives = 98/186 (52.69%), Query Frame = 0
Query: 6 VRGKMVSFSSVDINRVYKIKTPLRLRGKDAIKNPSAKQMKEALKLVANKGVQWKESHTKV 65
VRG V S+ IN +Y + L + +++ + ++ L+ VA G +W S V
Sbjct: 21 VRGVQVPLSAEAINTIYGL-GDLVDEHSEFVEDITEPELAMVLETVAIAGAEWNVSSQGV 80
Query: 66 KTLVPSDLKPELAIWLHFIKNRLMPTTHDSTISVERVMFLYSIMKGLEINIETIIREEIL 125
T + S L P IW HF+K+RL+PTTH +S ERV+ LYS++ G IN+ +I EI
Sbjct: 81 YTCLRSSLNPPAKIWYHFLKSRLLPTTHGKIVSKERVLLLYSMLTGKSINMGRMIHREIC 140
Query: 126 SCGRKKIEKLLFGSLITQLCQRVKIVPRNDEERHLFKPTIDLPLIGKL-QHNNAQRKDKA 185
+C +K L F SLI ++C+ + +EE+ ID + ++ Q A+ +
Sbjct: 141 ACAARKSGALFFPSLIIRMCRNARAPYLVNEEKLHNTGEIDAIAVARIAQEGPAEPSHQP 200
Query: 186 STSQAT 191
S+S+ T
Sbjct: 201 SSSRPT 205
BLAST of Lag0005389 vs. ExPASy TrEMBL
Match:
A0A2P5AGA5 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_335450 PE=4 SV=1)
HSP 1 Score: 97.1 bits (240), Expect = 1.0e-16
Identity = 54/153 (35.29%), Postives = 85/153 (55.56%), Query Frame = 0
Query: 6 VRGKMVSFSSVDINRVYKIKTPLRLRGKDAIKNPSAKQMKEALKLVANKGVQWKESHTKV 65
VRG VS+S IN V+ + P+ + I+N + + L+ VA G +W S
Sbjct: 95 VRGVQVSWSEEAINAVFGLGDPVD-EHSEFIENITEHDLITVLETVAVAGAEWNVSAQGA 154
Query: 66 KTLVPSDLKPELAIWLHFIKNRLMPTTHDSTISVERVMFLYSIMKGLEINIETIIREEIL 125
T + S L P +W HF+K+ L+PTTH T+S +R++ L+S++ G IN+ +I EI
Sbjct: 155 YTCIRSALTPAAKVWFHFLKSHLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIR 214
Query: 126 SCGRKKIEKLLFGSLITQLCQRVKIVPRNDEER 159
+C +K L F SLIT+LC+ + +EE+
Sbjct: 215 ACAARKTGALFFPSLITRLCRNARAPFLVNEEK 246
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
PON46472.1 | 1.1e-17 | 33.88 | hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii] | [more] |
PON62892.1 | 1.5e-17 | 33.87 | hypothetical protein PanWU01x14_135680 [Parasponia andersonii] | [more] |
PON78020.1 | 4.2e-17 | 35.71 | hypothetical protein PanWU01x14_023740 [Parasponia andersonii] | [more] |
PON50458.1 | 9.4e-17 | 32.80 | hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii] | [more] |
PON35554.1 | 2.1e-16 | 35.29 | hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A2P5BCG4 | 5.4e-18 | 33.88 | Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... | [more] |
A0A2P5CPE8 | 7.1e-18 | 33.87 | Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_135680 PE... | [more] |
A0A2P5DXM3 | 2.1e-17 | 35.71 | Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE... | [more] |
A0A2P5BNT0 | 4.6e-17 | 32.80 | Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... | [more] |
A0A2P5AGA5 | 1.0e-16 | 35.29 | Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... | [more] |
Match Name | E-value | Identity | Description | |