Lag0005389 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0005389
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionLOW QUALITY PROTEIN: uncharacterized protein LOC111022007
Locationchr6: 16103363 .. 16104034 (+)
RNA-Seq ExpressionLag0005389
SyntenyLag0005389
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCATGGCGGTGGTGAGAGGCAAGATGGTCAGTTTTTCTTCTGTTGACATCAACAGGGTGTACAAGATCAAAACACCCTTACGTCTAAGAGGGAAGGATGCCATCAAGAACCCCTCGGCCAAGCAGATGAAAGAAGCATTGAAATTAGTGGCCAACAAAGGTGTTCAGTGGAAGGAGTCCCATACAAAGGTGAAGACATTAGTGCCAAGCGATCTCAAGCCAGAATTGGCAATATGGCTTCACTTTATCAAGAACAGGTTGATGCCAACAACCCACGATAGCACCATTTCAGTAGAGAGAGTTATGTTCCTCTACAGTATCATGAAGGGGTTGGAGATAAACATTGAGACCATCATCAGAGAAGAGATCCTTTCATGTGGAAGGAAGAAAATAGAGAAGCTGTTATTTGGGTCACTGATTACCCAATTGTGTCAGAGGGTGAAGATAGTTCCTAGAAATGATGAGGAACGTCACTTATTCAAGCCAACCATTGATCTACCTCTGATTGGGAAGCTTCAACATAACAACGCCCAAAGAAAAGACAAAGCTTCCACTTCCCAAGCTACACCACCACTGAGGCTGACACCTGTTTCACCTCCTCAACACACTCCTATTTCAGAGCCCACATCTGTTGGGTTTTATGCCCTAAAACTCGTAGATAGTAAATGA

mRNA sequence

ATGATCATGGCGGTGGTGAGAGGCAAGATGGTCAGTTTTTCTTCTGTTGACATCAACAGGGTGTACAAGATCAAAACACCCTTACGTCTAAGAGGGAAGGATGCCATCAAGAACCCCTCGGCCAAGCAGATGAAAGAAGCATTGAAATTAGTGGCCAACAAAGGTGTTCAGTGGAAGGAGTCCCATACAAAGGTGAAGACATTAGTGCCAAGCGATCTCAAGCCAGAATTGGCAATATGGCTTCACTTTATCAAGAACAGGTTGATGCCAACAACCCACGATAGCACCATTTCAGTAGAGAGAGTTATGTTCCTCTACAGTATCATGAAGGGGTTGGAGATAAACATTGAGACCATCATCAGAGAAGAGATCCTTTCATGTGGAAGGAAGAAAATAGAGAAGCTGTTATTTGGGTCACTGATTACCCAATTGTGTCAGAGGGTGAAGATAGTTCCTAGAAATGATGAGGAACGTCACTTATTCAAGCCAACCATTGATCTACCTCTGATTGGGAAGCTTCAACATAACAACGCCCAAAGAAAAGACAAAGCTTCCACTTCCCAAGCTACACCACCACTGAGGCTGACACCTGTTTCACCTCCTCAACACACTCCTATTTCAGAGCCCACATCTGTTGGGTTTTATGCCCTAAAACTCGTAGATAGTAAATGA

Coding sequence (CDS)

ATGATCATGGCGGTGGTGAGAGGCAAGATGGTCAGTTTTTCTTCTGTTGACATCAACAGGGTGTACAAGATCAAAACACCCTTACGTCTAAGAGGGAAGGATGCCATCAAGAACCCCTCGGCCAAGCAGATGAAAGAAGCATTGAAATTAGTGGCCAACAAAGGTGTTCAGTGGAAGGAGTCCCATACAAAGGTGAAGACATTAGTGCCAAGCGATCTCAAGCCAGAATTGGCAATATGGCTTCACTTTATCAAGAACAGGTTGATGCCAACAACCCACGATAGCACCATTTCAGTAGAGAGAGTTATGTTCCTCTACAGTATCATGAAGGGGTTGGAGATAAACATTGAGACCATCATCAGAGAAGAGATCCTTTCATGTGGAAGGAAGAAAATAGAGAAGCTGTTATTTGGGTCACTGATTACCCAATTGTGTCAGAGGGTGAAGATAGTTCCTAGAAATGATGAGGAACGTCACTTATTCAAGCCAACCATTGATCTACCTCTGATTGGGAAGCTTCAACATAACAACGCCCAAAGAAAAGACAAAGCTTCCACTTCCCAAGCTACACCACCACTGAGGCTGACACCTGTTTCACCTCCTCAACACACTCCTATTTCAGAGCCCACATCTGTTGGGTTTTATGCCCTAAAACTCGTAGATAGTAAATGA

Protein sequence

MIMAVVRGKMVSFSSVDINRVYKIKTPLRLRGKDAIKNPSAKQMKEALKLVANKGVQWKESHTKVKTLVPSDLKPELAIWLHFIKNRLMPTTHDSTISVERVMFLYSIMKGLEINIETIIREEILSCGRKKIEKLLFGSLITQLCQRVKIVPRNDEERHLFKPTIDLPLIGKLQHNNAQRKDKASTSQATPPLRLTPVSPPQHTPISEPTSVGFYALKLVDSK
Homology
BLAST of Lag0005389 vs. NCBI nr
Match: PON46472.1 (hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii])

HSP 1 Score: 101.3 bits (251), Expect = 1.1e-17
Identity = 62/183 (33.88%), Postives = 97/183 (53.01%), Query Frame = 0

Query: 6   VRGKMVSFSSVDINRVYKIKTPLRLRGKDAIKNPSAKQMKEALKLVANKGVQWKESHTKV 65
           VRG  VS+S   IN V+ +  P+     + I+N + + +   L+ VA  G +W  S    
Sbjct: 104 VRGVQVSWSEEAINAVFGLGDPVD-EHSEFIQNITQQDLITVLETVAAAGAEWNVSAQGA 163

Query: 66  KTLVPSDLKPELAIWLHFIKNRLMPTTHDSTISVERVMFLYSIMKGLEINIETIIREEIL 125
            T + S L P   +W HF+K+RL+PTTH  T+S +R++ L+S++ G  IN+  +I  EI 
Sbjct: 164 YTCIRSALTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIR 223

Query: 126 SCGRKKIEKLLFGSLITQLCQRVKIVPRNDEERHLFKPTIDLPLIGKLQHNNAQRKDKAS 185
           +C  +K   L F SLIT+LC+  +     +EE+      ID   + ++    AQ     S
Sbjct: 224 ACAARKTGALFFPSLITRLCRNARAPFLVNEEKLHNTGEIDAIAVARI----AQEGPTES 281

Query: 186 TSQ 189
           T Q
Sbjct: 284 TQQ 281

BLAST of Lag0005389 vs. NCBI nr
Match: PON62892.1 (hypothetical protein PanWU01x14_135680 [Parasponia andersonii])

HSP 1 Score: 100.9 bits (250), Expect = 1.5e-17
Identity = 63/186 (33.87%), Postives = 97/186 (52.15%), Query Frame = 0

Query: 6   VRGKMVSFSSVDINRVYKIKTPLRLRGK--DAIKNPSAKQMKEALKLVANKGVQWKESHT 65
           VRG  V  S+  IN +Y +  P+    +  +AI  P   ++   L+ VA  G +W  S  
Sbjct: 11  VRGVQVPLSTEAINTIYGLGDPVDEHSEFVEAITEP---ELATVLETVAIAGAEWNVSSQ 70

Query: 66  KVKTLVPSDLKPELAIWLHFIKNRLMPTTHDSTISVERVMFLYSIMKGLEINIETIIREE 125
              T + S L P   +W HF+K+RL+PTTH  T+S ERV+ LYS++ G  IN+  II  E
Sbjct: 71  GAYTCLRSSLNPPAKVWYHFLKSRLLPTTHGKTVSKERVLLLYSMLTGKSINVGQIIHRE 130

Query: 126 ILSCGRKKIEKLLFGSLITQLCQRVKIVPRNDEERHLFKPTIDLPLIGKL-QHNNAQRKD 185
           I +   +K   L F SLIT++C   +     +EE+      ID   + ++ Q   A+   
Sbjct: 131 ICAYAARKSGALFFPSLITRMCCNARAPYLVNEEKLHNTGEIDAIAVARIAQEGPAEHSH 190

Query: 186 KASTSQ 189
           + S+S+
Sbjct: 191 RPSSSR 193

BLAST of Lag0005389 vs. NCBI nr
Match: PON78020.1 (hypothetical protein PanWU01x14_023740 [Parasponia andersonii])

HSP 1 Score: 99.4 bits (246), Expect = 4.2e-17
Identity = 55/154 (35.71%), Postives = 87/154 (56.49%), Query Frame = 0

Query: 6   VRGKMVSFSSVDINRVYKIKTPLRLRGKDAIKNPSAKQMKEALKLVANKGVQWKESHTKV 65
           VRG  VS+S   IN V+ +  P+     + I+N +  ++   L+ VA  G +W  S    
Sbjct: 34  VRGVQVSWSEEAINAVFGLGDPVD-EHSEFIENITEPELITVLETVAAAGAEWNVSAQGA 93

Query: 66  KTLVPSDLKPELAIWLHFIKNRLMPTTHDSTISVERVMFLYSIMKGLEINIETIIREEIL 125
            T + S L P   +W HF+K+RL+PTTH   +S +R++ L+S++ G  IN+  +I  EI 
Sbjct: 94  YTCIRSALTPAAKVWYHFLKSRLLPTTHGKIVSKDRMLLLHSMLNGKSINVGRMIHSEIR 153

Query: 126 SCGRKKIEKLLFGSLITQLCQRVKIVPRNDEERH 160
           +C  +K   L F SLIT+LC+    +  N+E+ H
Sbjct: 154 ACAAQKTGALFFPSLITRLCRNAPFLV-NEEKLH 185

BLAST of Lag0005389 vs. NCBI nr
Match: PON50458.1 (hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii])

HSP 1 Score: 98.2 bits (243), Expect = 9.4e-17
Identity = 61/186 (32.80%), Postives = 98/186 (52.69%), Query Frame = 0

Query: 6   VRGKMVSFSSVDINRVYKIKTPLRLRGKDAIKNPSAKQMKEALKLVANKGVQWKESHTKV 65
           VRG  V  S+  IN +Y +   L     + +++ +  ++   L+ VA  G +W  S   V
Sbjct: 21  VRGVQVPLSAEAINTIYGL-GDLVDEHSEFVEDITEPELAMVLETVAIAGAEWNVSSQGV 80

Query: 66  KTLVPSDLKPELAIWLHFIKNRLMPTTHDSTISVERVMFLYSIMKGLEINIETIIREEIL 125
            T + S L P   IW HF+K+RL+PTTH   +S ERV+ LYS++ G  IN+  +I  EI 
Sbjct: 81  YTCLRSSLNPPAKIWYHFLKSRLLPTTHGKIVSKERVLLLYSMLTGKSINMGRMIHREIC 140

Query: 126 SCGRKKIEKLLFGSLITQLCQRVKIVPRNDEERHLFKPTIDLPLIGKL-QHNNAQRKDKA 185
           +C  +K   L F SLI ++C+  +     +EE+      ID   + ++ Q   A+   + 
Sbjct: 141 ACAARKSGALFFPSLIIRMCRNARAPYLVNEEKLHNTGEIDAIAVARIAQEGPAEPSHQP 200

Query: 186 STSQAT 191
           S+S+ T
Sbjct: 201 SSSRPT 205

BLAST of Lag0005389 vs. NCBI nr
Match: PON35554.1 (hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii])

HSP 1 Score: 97.1 bits (240), Expect = 2.1e-16
Identity = 54/153 (35.29%), Postives = 85/153 (55.56%), Query Frame = 0

Query: 6   VRGKMVSFSSVDINRVYKIKTPLRLRGKDAIKNPSAKQMKEALKLVANKGVQWKESHTKV 65
           VRG  VS+S   IN V+ +  P+     + I+N +   +   L+ VA  G +W  S    
Sbjct: 95  VRGVQVSWSEEAINAVFGLGDPVD-EHSEFIENITEHDLITVLETVAVAGAEWNVSAQGA 154

Query: 66  KTLVPSDLKPELAIWLHFIKNRLMPTTHDSTISVERVMFLYSIMKGLEINIETIIREEIL 125
            T + S L P   +W HF+K+ L+PTTH  T+S +R++ L+S++ G  IN+  +I  EI 
Sbjct: 155 YTCIRSALTPAAKVWFHFLKSHLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIR 214

Query: 126 SCGRKKIEKLLFGSLITQLCQRVKIVPRNDEER 159
           +C  +K   L F SLIT+LC+  +     +EE+
Sbjct: 215 ACAARKTGALFFPSLITRLCRNARAPFLVNEEK 246

BLAST of Lag0005389 vs. ExPASy TrEMBL
Match: A0A2P5BCG4 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_251180 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 5.4e-18
Identity = 62/183 (33.88%), Postives = 97/183 (53.01%), Query Frame = 0

Query: 6   VRGKMVSFSSVDINRVYKIKTPLRLRGKDAIKNPSAKQMKEALKLVANKGVQWKESHTKV 65
           VRG  VS+S   IN V+ +  P+     + I+N + + +   L+ VA  G +W  S    
Sbjct: 104 VRGVQVSWSEEAINAVFGLGDPVD-EHSEFIQNITQQDLITVLETVAAAGAEWNVSAQGA 163

Query: 66  KTLVPSDLKPELAIWLHFIKNRLMPTTHDSTISVERVMFLYSIMKGLEINIETIIREEIL 125
            T + S L P   +W HF+K+RL+PTTH  T+S +R++ L+S++ G  IN+  +I  EI 
Sbjct: 164 YTCIRSALTPAAKVWYHFLKSRLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIR 223

Query: 126 SCGRKKIEKLLFGSLITQLCQRVKIVPRNDEERHLFKPTIDLPLIGKLQHNNAQRKDKAS 185
           +C  +K   L F SLIT+LC+  +     +EE+      ID   + ++    AQ     S
Sbjct: 224 ACAARKTGALFFPSLITRLCRNARAPFLVNEEKLHNTGEIDAIAVARI----AQEGPTES 281

Query: 186 TSQ 189
           T Q
Sbjct: 284 TQQ 281

BLAST of Lag0005389 vs. ExPASy TrEMBL
Match: A0A2P5CPE8 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_135680 PE=4 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 7.1e-18
Identity = 63/186 (33.87%), Postives = 97/186 (52.15%), Query Frame = 0

Query: 6   VRGKMVSFSSVDINRVYKIKTPLRLRGK--DAIKNPSAKQMKEALKLVANKGVQWKESHT 65
           VRG  V  S+  IN +Y +  P+    +  +AI  P   ++   L+ VA  G +W  S  
Sbjct: 11  VRGVQVPLSTEAINTIYGLGDPVDEHSEFVEAITEP---ELATVLETVAIAGAEWNVSSQ 70

Query: 66  KVKTLVPSDLKPELAIWLHFIKNRLMPTTHDSTISVERVMFLYSIMKGLEINIETIIREE 125
              T + S L P   +W HF+K+RL+PTTH  T+S ERV+ LYS++ G  IN+  II  E
Sbjct: 71  GAYTCLRSSLNPPAKVWYHFLKSRLLPTTHGKTVSKERVLLLYSMLTGKSINVGQIIHRE 130

Query: 126 ILSCGRKKIEKLLFGSLITQLCQRVKIVPRNDEERHLFKPTIDLPLIGKL-QHNNAQRKD 185
           I +   +K   L F SLIT++C   +     +EE+      ID   + ++ Q   A+   
Sbjct: 131 ICAYAARKSGALFFPSLITRMCCNARAPYLVNEEKLHNTGEIDAIAVARIAQEGPAEHSH 190

Query: 186 KASTSQ 189
           + S+S+
Sbjct: 191 RPSSSR 193

BLAST of Lag0005389 vs. ExPASy TrEMBL
Match: A0A2P5DXM3 (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 2.1e-17
Identity = 55/154 (35.71%), Postives = 87/154 (56.49%), Query Frame = 0

Query: 6   VRGKMVSFSSVDINRVYKIKTPLRLRGKDAIKNPSAKQMKEALKLVANKGVQWKESHTKV 65
           VRG  VS+S   IN V+ +  P+     + I+N +  ++   L+ VA  G +W  S    
Sbjct: 34  VRGVQVSWSEEAINAVFGLGDPVD-EHSEFIENITEPELITVLETVAAAGAEWNVSAQGA 93

Query: 66  KTLVPSDLKPELAIWLHFIKNRLMPTTHDSTISVERVMFLYSIMKGLEINIETIIREEIL 125
            T + S L P   +W HF+K+RL+PTTH   +S +R++ L+S++ G  IN+  +I  EI 
Sbjct: 94  YTCIRSALTPAAKVWYHFLKSRLLPTTHGKIVSKDRMLLLHSMLNGKSINVGRMIHSEIR 153

Query: 126 SCGRKKIEKLLFGSLITQLCQRVKIVPRNDEERH 160
           +C  +K   L F SLIT+LC+    +  N+E+ H
Sbjct: 154 ACAAQKTGALFFPSLITRLCRNAPFLV-NEEKLH 185

BLAST of Lag0005389 vs. ExPASy TrEMBL
Match: A0A2P5BNT0 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_223230 PE=4 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 4.6e-17
Identity = 61/186 (32.80%), Postives = 98/186 (52.69%), Query Frame = 0

Query: 6   VRGKMVSFSSVDINRVYKIKTPLRLRGKDAIKNPSAKQMKEALKLVANKGVQWKESHTKV 65
           VRG  V  S+  IN +Y +   L     + +++ +  ++   L+ VA  G +W  S   V
Sbjct: 21  VRGVQVPLSAEAINTIYGL-GDLVDEHSEFVEDITEPELAMVLETVAIAGAEWNVSSQGV 80

Query: 66  KTLVPSDLKPELAIWLHFIKNRLMPTTHDSTISVERVMFLYSIMKGLEINIETIIREEIL 125
            T + S L P   IW HF+K+RL+PTTH   +S ERV+ LYS++ G  IN+  +I  EI 
Sbjct: 81  YTCLRSSLNPPAKIWYHFLKSRLLPTTHGKIVSKERVLLLYSMLTGKSINMGRMIHREIC 140

Query: 126 SCGRKKIEKLLFGSLITQLCQRVKIVPRNDEERHLFKPTIDLPLIGKL-QHNNAQRKDKA 185
           +C  +K   L F SLI ++C+  +     +EE+      ID   + ++ Q   A+   + 
Sbjct: 141 ACAARKSGALFFPSLIIRMCRNARAPYLVNEEKLHNTGEIDAIAVARIAQEGPAEPSHQP 200

Query: 186 STSQAT 191
           S+S+ T
Sbjct: 201 SSSRPT 205

BLAST of Lag0005389 vs. ExPASy TrEMBL
Match: A0A2P5AGA5 (Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x14_335450 PE=4 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 1.0e-16
Identity = 54/153 (35.29%), Postives = 85/153 (55.56%), Query Frame = 0

Query: 6   VRGKMVSFSSVDINRVYKIKTPLRLRGKDAIKNPSAKQMKEALKLVANKGVQWKESHTKV 65
           VRG  VS+S   IN V+ +  P+     + I+N +   +   L+ VA  G +W  S    
Sbjct: 95  VRGVQVSWSEEAINAVFGLGDPVD-EHSEFIENITEHDLITVLETVAVAGAEWNVSAQGA 154

Query: 66  KTLVPSDLKPELAIWLHFIKNRLMPTTHDSTISVERVMFLYSIMKGLEINIETIIREEIL 125
            T + S L P   +W HF+K+ L+PTTH  T+S +R++ L+S++ G  IN+  +I  EI 
Sbjct: 155 YTCIRSALTPAAKVWFHFLKSHLLPTTHGKTVSKDRMLLLHSMLIGKSINVGRMIHSEIR 214

Query: 126 SCGRKKIEKLLFGSLITQLCQRVKIVPRNDEER 159
           +C  +K   L F SLIT+LC+  +     +EE+
Sbjct: 215 ACAARKTGALFFPSLITRLCRNARAPFLVNEEK 246

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
PON46472.11.1e-1733.88hypothetical protein PanWU01x14_251180, partial [Parasponia andersonii][more]
PON62892.11.5e-1733.87hypothetical protein PanWU01x14_135680 [Parasponia andersonii][more]
PON78020.14.2e-1735.71hypothetical protein PanWU01x14_023740 [Parasponia andersonii][more]
PON50458.19.4e-1732.80hypothetical protein PanWU01x14_223230, partial [Parasponia andersonii][more]
PON35554.12.1e-1635.29hypothetical protein PanWU01x14_335450, partial [Parasponia andersonii][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2P5BCG45.4e-1833.88Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... [more]
A0A2P5CPE87.1e-1833.87Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_135680 PE... [more]
A0A2P5DXM32.1e-1735.71Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_023740 PE... [more]
A0A2P5BNT04.6e-1732.80Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... [more]
A0A2P5AGA51.0e-1635.29Uncharacterized protein (Fragment) OS=Parasponia andersonii OX=3476 GN=PanWU01x1... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 177..209

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0005389.1Lag0005389.1mRNA