Lag0005240 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0005240
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Locationchr6: 12598464 .. 12605888 (+)
RNA-Seq ExpressionLag0005240
SyntenyLag0005240
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACGACCGGCGAATCTTCTTCTTCCTCCTCCTTAGGACCTGTAGTTACTCCCGTCGTATCTCCTTCTACACCGATTACTACACCGGTTATTACTCCCATAGCCCAAAGACCTACTACCGATCCTTCAAATCCCTCTGTTCTTCCTCGAGTTGCTGCACCAGTTTTTCCGCCTGCAAATCAGTCCCCTACCCACCCTCGAGCTCCTCAATCTCAGCCAGCCTTTACTCCTTATCAACCGCAACAGTACCCCTACCCTACTGCTACAACCCAACCTTTTTACCCAACCTCTAATTTCTTTCCGAGAGCCCCATATCCTGCGCCTCCAACTTTTTCCCAAACTGCTCCACCAAATACATATCAGAACCCTTTTGGCCCGAGTCCTTTTCCTACTCTCCCTCAACCTTTGGCTGTTAAACTCAACGATAATAACTTCCTTCTCTGGAAAAACCAGCTTCTGAATGCTGTTCTCGCCAATGGTCTTCATGGATTTCTTGATGGATCGATCCCTACACCACCAAAGTTTCTGGATACTCAACAGATGCAACTGAACCCGGATTTTCTTACTTGGGAAAGGTATAATCGTCTCATTATGTGTTGGATGTATTCTTCTTTGTCTGAGGAAAAGATGGGTGAAATCGTTAGTTTAGAAACAGCGTTTGATATTTGGAACTCTCTAAAGCGTGCCTATGATTCAAAAACCACTGCTCGTATAATGGGATTAAAGACTCAGTTGCAAAAGATTAAGAAAGAAGGGTTGCCTGTGAGTCAATATTTAGCTCAAATCAAGGAGGTTGCTGATAAATTTGCTGCTATAGGTGAACCTATCTCATATAGAGATCATTTAGCTCATATCTTGGATAGTCTTGGTAGTGAATATAATGCTTTTGTGACTACCATACAAAATAGAACTGATAATCCAGCATTAGAAGATGTTCGGAGTTTACTGTTGGCCTATGAAGCTCGCCTTGAGAAACAGAATGTTGTGGAACAGCTTAATGTGGCTCAAGCAAATCTTAGTACCCTTCATCTCCAACCTGTTCATCTCCGTCCCTCACACCAATCTCGTTCCTCCTCTACCACATCATATAGACCTCCCTTCAATCCATCTCCAATGCCATTTTCCTCTCCACCCGTGTTCTCTTCTAGCATATTAGGAAAACCTCAATCCTCACCCTCACAAAATAGATCCCCCAGAAACAATTCTTCCAAGCCACAGTGCCAAATTTGTGGCAAATTTGGGCATATCGCTCTTATTTGTCACCACCATACCAACCTAGCGTATCAAACCCCACCACTTCAAGCCTTGCTCACTACAACTCAGCCTGCTGTCCCTTCCCCATTATTAGATTCTGTTTCTACCTTCTCTACTGATTCCTATCATCCGGATGAGAATTGGTATCTTGACTCGGGCGCCACTCACCATATGACTCCAGATGCGTCGTCTCTTCAAACTTTGATGCCATACAATGGTGGTGAACAAGTCACGGTAGGAAATGGTAAGCAAATTGACATCTCTCATGTTGGTACTTCCTTTCTATCCTCTTTTCATAAACCAGTCTATCTTGATGCTGTCTTATATACTCCTGCTATTTCAAAAAAACTTATTAGTGTTGCCCGTTTGTGTAAAGATAACAAAGCCTATGTTGAATTCTATTCCTCTTTTTTTCTTGTTAAGGACATTCGCTCCAAGCAAATCCTTCTCCAGGGCACTCTTAAAGATGGCTTATATAGGTTGTCTCCTGCTGCCTCCAATACTTCAGCTTCTACATCAAGTTTTTCATCCATTTCTAATGTTGTTGCCCTTTTGTCAACCACATCTACGGCTCCAAATTGGCACATCCGATTGGGGCATCCAGCTGCATCAACTCTGTGGCAAATTTTATCTTTATGTCAAATCTCTTGCTCAAGTGTCAATGACTTTTGTAATTCGTGTCAGTTAGCTAAGAGTCACCGTTTACCTTTTTCATTATCTGAATCTATGTCTACTGAACCTTTCCAGTTAATTCATTCCGATGTATGGGGACCTTCCCCACATGTTTCTATTAATGGAGCTAGATACTTTTTGTTGTTTGTGGATGACTTTTCTCGCTTTACTTGGCTTTATTTGTTGAAAACAAAAGATGAGGTGTTCCCTTGTTTCCTTCATTTTAAAAAGTATGTTGAGGTTCAATTTAATACTCGCATTAAGAGTATGCAAACTGATTGGGGAGGCGAGTTTCGTCGTGTCTCTTCCTTTTTATCTTCTAATGGCATTATTCATCGAGTGGCTTGTCCTCATACTCCTCAACAAAATGGGCGGGTTGAGCGCAAAAATAGACATATTGTTGAAATCGGTTTATCTCTTCTTGCTCACTCTAGCTTGCCTTTGTCTTTTTGGAGTTATGCTTTTCAAACTGCGGTTTATCTTATTAATCGTTTGCCTACTAGTGTTCTTCATTCTCAATGTCCTTATCAAGTCCTTTATGATCGTTTACCTGATTATTCTTTGCTTCGTAGTTTTGGTTGCGCTTGTTTTCCTTTTCTTCGGCCATATAATGCTCATAAACTTCTTTTTCGCTCAAAAGAATGCATTTTCATTGGGTATAGCTCTAATCATAAGGGATATTTATGCCTCGATCCATCTTCGGGTCGTCTCTATGTATCTCGTCATGTTATTTTCAATGAAAATGTGTTTCCCTGCTCTCAAAGAGATTTTACTTTCGGCTCTGTTAAATACCCCCCTCCAGATCAATTTTTTCACTCTTCTGCTCTGTTTCTAATTTTTTCCTCTTCTCCAGTGGCTTTTCCACCTTCTTCACCTACTCCGTCCATGTCTTTATCTCATCCTCCCGACTTCTCTTCCTTGTCGTGCACTAGTGTTCACCATCAGTCAGCATCTAAGATTGACGCCTCTGCTGTTTCCCCATTTTCCTCTCTTTCGGCCCCTTCTATCCAATCACCAGTTCTTTCTTCACCCAATCCTTCTGCTACTGCTTCGGCACAATTAATACAGCCTAACCAATCTGCTTCTTTGGCTTCTTCTTCACCCATTTGTGCTTCCGCATCTGATCTCTATTTTTTGTCTGCTGATGTTCCCTCCCAACTCCCACCTTCGGATGCATCTCCCCCTTCTCTACCTTATCATCCACCAGCTCCTCTCTCTAATTTGCATCCTATGATTACCCGTGCCAAAGCTGGAATAACTAAACCAAAATGTTGGCTATCTACTTCTCCCATCCCTCCTTCCATTACCGAACCCTCATCTTTCAGGATGGCGGTAAAACAGGTTGAATGGTGTGAAGCTATGGAGAAAGAGTTTGCAGCTTTGGTTTCTAATAAGACATGGACTCTTGTTCCTCCTTCCAATGCTTATAAAGTCATCAGTTGTAAATGGGTGTATAAAATTAAACTTAAACCAAATGGGGACATTGAGCGCTATAAGGCTCGCCTTGTGGCTCGTGGTTTTGATCAGGCTTATGGCATCGACTATTTTGAAACGTTCAGCCCAGTATAAAGCCGTCTACTATTCGTATAGTGTTGTCTCTTGCTGTTCGGTTTAACTGGGCCATTAAACAATTGGATGTTCATAATGCTTTTCTGAATGGGGATCTTCATGAGGATGTGTACATGTATCAACCTCCTGGTTTTGTTGATAAAAATCGACCCGAGCATGTGTGTAAATTGCAAAAGGCTTTATATGGTTTAAAGCAAAGTCCTCGTGAATGGTTTATGAAACTGAGTACATGTCTTCTGCAGTGGGATTTTAAGGCTTCTAAATCTGATAAATCTATGTTTGTGCTTAACAAAGATTCAGTTTTGGTGATTATTTTGGTTTATGTTGATGATATCTTGGTTACAGGAAATAATTTAGCGTTCATTCAGAAATTTATTAAGTCTCTAAACGAGTTGTTTGCTCTCAAAGATCTTGGTGACTTGTCATATTTTTTGGGCATTGAGGTTCGTCGAGATTCTAATTCATTACATTTATCTCAAAGCAAGTATTTTCATGATATCCTCCAACGAGCAGCAATGCAGGACTGTAAGCCAATTGCTACTCCTATGGCTAGTGGTATGATTATGTCTATAAATGATGGTGAGTTGTTGTCGGATCCTAAACAATATAGAAGCCTTGTTGGTGCTCTTCAGTATTGCACTTTAACTCGTCCTGATCTGAGTTTTGTGGTTAACAAAGTTTGTCAATTTCTTCATGCTCCTACTTCAGTACACTGGCTTGCAGTTAAACGCATTCTTCGTTATTTGAAGGCCACTCACCATCATTTAACAAATTTGTCGTATTTGCAATTTTTTTTTCTAATTTTGCTATATTTGCAAATAGGAAAACATAAATTGCTACCCATTACAATAACCCTTTTTTTTTTAGTTCAAAAAAGAAAGTGACCTATTCACTCATCACAAAGTATCTAAAATATAAAGGTAATTTGTAGGGAATTGCTATCTACACCTCCTATATCTTTTTTTTTTTTTTTTTTTGAACAACAAAATGGAATTTCATTAAACGGAAGGAACTCCCCTAGGGGATACAAAAAGAGAATACTCATGATGCGTCAAGCTAATTATCCAATCAGGATAATTTGTTGTCCACTCCCCAGGAGAAAAAAACTAAGCCAACTCATGGGCGAGTTTGTTAAAATGACGATGGATGTGACAAAACTTTACCCTATGAAAGGAAGTTTGTAGACTCCTTATGTCCCACAAAATTGATGCAATACTCGATTCACATTGGTCCACCCCTGAATGGCATGAACCAATGAGAGAGAATCTGACATCATCGTCACACTTTCCACTTTCAATCTACTTGAAAATCAAAGCTCCTTTAGCATTGCTATCGTTTCAGCACATAAAGAAGTAGTACAAATCTTGGATGACAAAGACAATCCCGCCTTCAATCACCCTGCTTATCACGAAGCACTACCCCAATTCTAGTCCTCCGGTTAGGTTCATCAAAAGCCGCAACAGTATGCATTATGGTCTCCTCCCCTTTGTCAATTAACTCTTGGATTGCCGCATCTGACGGTGAAATGGAACCATTAACCCCATTGGCCTTTTGAAACTCATCTAGATAATCATAAATCCACGCACATTGAGCCTCAATGCTGGGAATATGATGATTATGTTGGGTTTTATGCCCTAAAACTCGTAGATAGTGAATATAAATAAATTGTATACTTGTTTCAATAAAGTGTTATTGAGTTTCTACAATAAACTGTTATTGTTAAATATTGCACAGTTTGACCCAAATCCAATAAACTAAGATCCAAGGTTGTTTACATGTGACTTGAACTAGTATGTGAGGACATACGAGGATCGGTGTTCAAGTAAAAACCTAAAAGGTCTATAGTACAAGGATAAGGCTAGGTACCTTATCCTGGCAGCCTTATCCTGGTAACACTATGTGATACGGCCCGCTTTGTATTCGATACAGACGTATTGATCCAAGACGTCCATGTAGGAGACATGCGAGCGGGGGTATCCTATGCAATGAGTTTGCATAAGACCGGACCACGAAATAGTAAACCACTAGATGTAACACCGTTAACTAGTTAAGTTACTGTTTCAATAGGATGACTAGGTAACTCCGTCTTGATCCTGAGTGTGTCATGAACTCCTTCTCACGTGGGGTTGTCCTTTGATTAGTATGGGTGAGATTGGCCTGCACACCAACTCAATAAGCCTACCTTCTTGGGGACAAGACCGAGTGGGGGGTTAAATATATGATATTTAATTGGGTAATTAATTAATTAACTAATAGAAGGTCTGAAATTAAATATATGATATTTAATTGGTGATCAATTAATTAAATAATTAATTGGAAATTAATCAATTATGGAAATGATTAATCACTTATGGAAGTAATCAATCATTTATGGAAAAGATTAATCAGTTATGGAATTGATTAGTCATGGAATTGATTAATTATGGAAAAGATTAAATCGGTTATGGAAATAATTGATTTTAAATGAATATTTTATTCATGACCTTTCTCCTAGAAATAGAACACTAACCCAAGGGTTTAGGTACTACAACTTATGGCCACCATAAGACCCTCTCATATTCTCTCAACTCAAGAACTCTAGGGAGAATTTTCTCTCTAGAGTTTTTCCCATTCAAGATTAGGTAGTCCCACAACTACGTTCCTAATCTCAGAGTTATAGCGGGGAAGATCAATTGGTGGTGTCCCAATTGTTGACGCTCGGTCCAAAATCAAGAAAGGCGTTGAAGTATTCAAAGTCGTCAACGAAGGTATGTTTCTCATCGCTTAACCTTTTGCCAATGTATCGGTATTTTGTAGAACAAAATTAATTTACGAACAGTCCAATTGCTTCTGCTTTATCAGAATTAGGGAATTCCAATCTTTCAGATTATGTATAACATTATTTCTATCATTCCAAATTGCCCAAGCACCAACACATGTCAGATTCAAGCTAGTCGACCTCCTGACAACTATTGAGATTGAGTCATCGATCCTTTGTCCATTTGCCTATGTTGAATCCTATTCTCATCTGGAACTAGAACTTCCCATACTTTCGTAGCCCGATTACAAAGAAACAAAGCATGGTCTGTAGTCTCTGGTCCGTCCTGACAAACTGAGCAAAATCCATCAACCGGGACATGGTGGCGCCATAGGTTGGACATAGTTGGAATAGAATTATGAAAATAACTCCATAAAAAGTGTTTGACCTTGTTTGGAATCCTCAACTTCCATAACTGCTTCCACCATTTACTCTCTGCTTTTATATATGAAGTAGAGGTCTCCTGCTGATGCAACATACTAAATTTATACCCACTTTTGACAGTATACTTCCCCCATCTTACTAGTGAGGAGAGAAGTATTGAAAAGAATATATATCAAATTAAAGAGAGAAATGTAACTTATACAGAGAGAATATATTTACAACTTAAAAAAAGAGAGAGAACATATTTACTAAAAAAGGTTAGAGAAATACATAATATAAGGTGTGAAAATAAAACTCAACCAACTAACAGTGGCAGATCCACGAAGGGGCCGAGGGGCACGTGCCCCCTTGAACTTCAAATGATATAAATTATATATATAATTTGCCGCTAGTTTTTGAAAAGGATTACCTTGGCCTAGTGGCTTCTATATAGGTTCACATGAACATTCCCCCTTCTGAATGATCCTGAGTTCGACCCTCATCAATTCATATTTCACACTTTTGGTTCAGCAGATCTGCGGCGAGGTCAGTTCGCGAGCAGCGTCGATGCGAGCAGTCTGTTGGCAGCGAGCAGCGTCTGCGGTGTGGTCAGTTTGCGAGCAGGTCTCGTTCGTTTCGTGCCAGATCCAGATCTCGTTAGTTTCGCGCCAGATCCCTCGTTCGATCCAGGTCAGTTTGTTTCGCTCCCGATGTTTGTAGCCCTGCCGTTGAAACGCTCGCCTGCCGCCATAGCCCCACCGTCGTCATAG

mRNA sequence

ATGACGACCGGCGAATCTTCTTCTTCCTCCTCCTTAGGACCTGTAGTTACTCCCGTCGTATCTCCTTCTACACCGATTACTACACCGGTTATTACTCCCATAGCCCAAAGACCTACTACCGATCCTTCAAATCCCTCTGTTCTTCCTCGAGTTGCTGCACCAGTTTTTCCGCCTGCAAATCAGTCCCCTACCCACCCTCGAGCTCCTCAATCTCAGCCAGCCTTTACTCCTTATCAACCGCAACAGTACCCCTACCCTACTGCTACAACCCAACCTTTTTACCCAACCTCTAATTTCTTTCCGAGAGCCCCATATCCTGCGCCTCCAACTTTTTCCCAAACTGCTCCACCAAATACATATCAGAACCCTTTTGGCCCGAGTCCTTTTCCTACTCTCCCTCAACCTTTGGCTGTTAAACTCAACGATAATAACTTCCTTCTCTGGAAAAACCAGCTTCTGAATGCTGTTCTCGCCAATGGTCTTCATGGATTTCTTGATGGATCGATCCCTACACCACCAAAGTTTCTGGATACTCAACAGATGCAACTGAACCCGGATTTTCTTACTTGGGAAAGGTATAATCGTCTCATTATGTGTTGGATGTATTCTTCTTTGTCTGAGGAAAAGATGGGTGAAATCGTTAGTTTAGAAACAGCGTTTGATATTTGGAACTCTCTAAAGCGTGCCTATGATTCAAAAACCACTGCTCGTATAATGGGATTAAAGACTCAGTTGCAAAAGATTAAGAAAGAAGGGTTGCCTGTGAGTCAATATTTAGCTCAAATCAAGGAGGTTGCTGATAAATTTGCTGCTATAGGTGAACCTATCTCATATAGAGATCATTTAGCTCATATCTTGGATAGTCTTGGTAGTGAATATAATGCTTTTGTGACTACCATACAAAATAGAACTGATAATCCAGCATTAGAAGATGTTCGGAGTTTACTGTTGGCCTATGAAGCTCGCCTTGAGAAACAGAATGTTGTGGAACAGCTTAATGTGGCTCAAGCAAATCTTAGTACCCTTCATCTCCAACCTGTTCATCTCCGTCCCTCACACCAATCTCGTTCCTCCTCTACCACATCATATAGACCTCCCTTCAATCCATCTCCAATGCCATTTTCCTCTCCACCCGTGTTCTCTTCTAGCATATTAGGAAAACCTCAATCCTCACCCTCACAAAATAGATCCCCCAGAAACAATTCTTCCAAGCCACAGTGCCAAATTTGTGGCAAATTTGGGCATATCGCTCTTATTTGTCACCACCATACCAACCTAGCGTATCAAACCCCACCACTTCAAGCCTTGCTCACTACAACTCAGCCTGCTGTCCCTTCCCCATTATTAGATTCTGTTTCTACCTTCTCTACTGATTCCTATCATCCGGATGAGAATTGGTATCTTGACTCGGGCGCCACTCACCATATGACTCCAGATGCGTCGTCTCTTCAAACTTTGATGCCATACAATGGTGGTGAACAAGTCACGGTAGGAAATGGTAAGCAAATTGACATCTCTCATGTTGGTACTTCCTTTCTATCCTCTTTTCATAAACCAGTCTATCTTGATGCTGTCTTATATACTCCTGCTATTTCAAAAAAACTTATTAGTGTTGCCCGTTTGTGTAAAGATAACAAAGCCTATGTTGAATTCTATTCCTCTTTTTTTCTTGTTAAGGACATTCGCTCCAAGCAAATCCTTCTCCAGGGCACTCTTAAAGATGGCTTATATAGGTTGTCTCCTGCTGCCTCCAATACTTCAGCTTCTACATCAAGTTTTTCATCCATTTCTAATGTTGTTGCCCTTTTGTCAACCACATCTACGGCTCCAAATTGGCACATCCGATTGGGGCATCCAGCTGCATCAACTCTGTGGCAAATTTTATCTTTATGTCAAATCTCTTGCTCAAGTGTCAATGACTTTTGTAATTCGTGTCAGTTAGCTAAGAGTCACCGTTTACCTTTTTCATTATCTGAATCTATGTCTACTGAACCTTTCCAGTTAATTCATTCCGATGTATGGGGACCTTCCCCACATGTTTCTATTAATGGAGCTAGATACTTTTTGTTGTTTGTGGATGACTTTTCTCGCTTTACTTGGCTTTATTTGTTGAAAACAAAAGATGAGGTGTTCCCTTGTTTCCTTCATTTTAAAAAGTATGTTGAGGTTCAATTTAATACTCGCATTAAGAGTATGCAAACTGATTGGGGAGGCGAGTTTCGTCGTGTCTCTTCCTTTTTATCTTCTAATGGCATTATTCATCGAGTGGCTTGTCCTCATACTCCTCAACAAAATGGGCGGGTTGAGCGCAAAAATAGACATATTGTTGAAATCGGTTTATCTCTTCTTGCTCACTCTAGCTTGCCTTTGTCTTTTTGGAGTTATGCTTTTCAAACTGCGGTTTATCTTATTAATCGTTTGCCTACTAGTGTTCTTCATTCTCAATGTCCTTATCAAGTCCTTTATGATCGTTTACCTGATTATTCTTTGCTTCGTAGTTTTGGTTGCGCTTGTTTTCCTTTTCTTCGGCCATATAATGCTCATAAACTTCTTTTTCGCTCAAAAGAATGCATTTTCATTGGGTATAGCTCTAATCATAAGGGATATTTATGCCTCGATCCATCTTCGGGTCGTCTCTATGTATCTCGTCATGTTATTTTCAATGAAAATGTGTTTCCCTGCTCTCAAAGAGATTTTACTTTCGGCTCTGTTAAATACCCCCCTCCAGATCAATTTTTTCACTCTTCTGCTCTGTTTCTAATTTTTTCCTCTTCTCCAGTGGCTTTTCCACCTTCTTCACCTACTCCGTCCATGTCTTTATCTCATCCTCCCGACTTCTCTTCCTTGTCGTGCACTAGTGTTCACCATCAGTCAGCATCTAAGATTGACGCCTCTGCTGTTTCCCCATTTTCCTCTCTTTCGGCCCCTTCTATCCAATCACCAGTTCTTTCTTCACCCAATCCTTCTGCTACTGCTTCGGCACAATTAATACAGCCTAACCAATCTGCTTCTTTGGCTTCTTCTTCACCCATTTGTGCTTCCGCATCTGATCTCTATTTTTTGTCTGCTGATGTTCCCTCCCAACTCCCACCTTCGGATGCATCTCCCCCTTCTCTACCTTATCATCCACCAGCTCCTCTCTCTAATTTGCATCCTATGATTACCCGTGCCAAAGCTGGAATAACTAAACCAAAATGTTGGCTATCTACTTCTCCCATCCCTCCTTCCATTACCGAACCCTCATCTTTCAGGATGGCGGTAAAACAGGTTGAATGGTGTGAAGCTATGGAGAAAGAGTTTGCAGCTTTGGTTTCTAATAAGACATGGACTCTTGTTCCTCCTTCCAATGCTTATAAAGTCATCAGTTGTAAATGGCCCAGTATAAAGCCGTCTACTATTCGTATAGTGTTGTCTCTTGCTGTTCGGTTTAACTGGGCCATTAAACAATTGGATGTTCATAATGCTTTTCTGAATGGGGATCTTCATGAGGATGTGTACATGTATCAACCTCCTGGTTTTGTTGATAAAAATCGACCCGAGCATGTGTGTAAATTGCAAAAGGCTTTATATGGTTTAAAGCAAAGTCCTCGTGAATGGTTTATGAAACTGAGTACATGTCTTCTGCAGTGGGATTTTAAGGCTTCTAAATCTGATAAATCTATGTTTGTGCTTAACAAAGATTCAGTTTTGGTGATTATTTTGGTTTATGTTGATGATATCTTGGTTACAGGAAATAATTTAGCGTTCATTCAGAAATTTATTAAGTCTCTAAACGAGTTGTTTGCTCTCAAAGATCTTGGTGACTTGTCATATTTTTTGGGCATTGAGGTTCGTCGAGATTCTAATTCATTACATTTATCTCAAAGCAAGTATTTTCATGATATCCTCCAACGAGCAGCAATGCAGGACTGTAAGCCAATTGCTACTCCTATGGCTAGTGGTATGATTATGTCTATAAATGATGGTGAGTTGTTGTCGGATCCTAAACAATATAGAAGCCTTGTTGGTGCTCTTCAGTATTGCACTTTAACTCGTCCTGATCTGAGTTTTGTGGTTAACAAAGTTTGTCAATTTCTTCATGCTCCTACTTCAGTACACTGGCTTGCAGTTAAACGCATTCTTCGTTATTTGAAGGCCACTCACCATCATTTAACAAATTTGTCATCAATTGGTGGTGTCCCAATTGTTGACGCTCGGTCCAAAATCAAGAAAGGCGTTGAAGTATTCAAAGTCGTCAACGAAGATCTGCGGCGAGGTCAGTTCGCGAGCAGCGTCGATGCGAGCAGTCTGTTGGCAGCGAGCAGCGTCTGCGGTGTGGTCAGTTTGCGAGCAGGTCTCGTTCGTTTCGTGCCAGATCCAGATCTCGTTAGTTTCGCGCCAGATCCCTCGTTCGATCCAGGTCAGTTTGTTTCGCTCCCGATGTTTGTAGCCCTGCCGTTGAAACGCTCGCCTGCCGCCATAGCCCCACCGTCGTCATAG

Coding sequence (CDS)

ATGACGACCGGCGAATCTTCTTCTTCCTCCTCCTTAGGACCTGTAGTTACTCCCGTCGTATCTCCTTCTACACCGATTACTACACCGGTTATTACTCCCATAGCCCAAAGACCTACTACCGATCCTTCAAATCCCTCTGTTCTTCCTCGAGTTGCTGCACCAGTTTTTCCGCCTGCAAATCAGTCCCCTACCCACCCTCGAGCTCCTCAATCTCAGCCAGCCTTTACTCCTTATCAACCGCAACAGTACCCCTACCCTACTGCTACAACCCAACCTTTTTACCCAACCTCTAATTTCTTTCCGAGAGCCCCATATCCTGCGCCTCCAACTTTTTCCCAAACTGCTCCACCAAATACATATCAGAACCCTTTTGGCCCGAGTCCTTTTCCTACTCTCCCTCAACCTTTGGCTGTTAAACTCAACGATAATAACTTCCTTCTCTGGAAAAACCAGCTTCTGAATGCTGTTCTCGCCAATGGTCTTCATGGATTTCTTGATGGATCGATCCCTACACCACCAAAGTTTCTGGATACTCAACAGATGCAACTGAACCCGGATTTTCTTACTTGGGAAAGGTATAATCGTCTCATTATGTGTTGGATGTATTCTTCTTTGTCTGAGGAAAAGATGGGTGAAATCGTTAGTTTAGAAACAGCGTTTGATATTTGGAACTCTCTAAAGCGTGCCTATGATTCAAAAACCACTGCTCGTATAATGGGATTAAAGACTCAGTTGCAAAAGATTAAGAAAGAAGGGTTGCCTGTGAGTCAATATTTAGCTCAAATCAAGGAGGTTGCTGATAAATTTGCTGCTATAGGTGAACCTATCTCATATAGAGATCATTTAGCTCATATCTTGGATAGTCTTGGTAGTGAATATAATGCTTTTGTGACTACCATACAAAATAGAACTGATAATCCAGCATTAGAAGATGTTCGGAGTTTACTGTTGGCCTATGAAGCTCGCCTTGAGAAACAGAATGTTGTGGAACAGCTTAATGTGGCTCAAGCAAATCTTAGTACCCTTCATCTCCAACCTGTTCATCTCCGTCCCTCACACCAATCTCGTTCCTCCTCTACCACATCATATAGACCTCCCTTCAATCCATCTCCAATGCCATTTTCCTCTCCACCCGTGTTCTCTTCTAGCATATTAGGAAAACCTCAATCCTCACCCTCACAAAATAGATCCCCCAGAAACAATTCTTCCAAGCCACAGTGCCAAATTTGTGGCAAATTTGGGCATATCGCTCTTATTTGTCACCACCATACCAACCTAGCGTATCAAACCCCACCACTTCAAGCCTTGCTCACTACAACTCAGCCTGCTGTCCCTTCCCCATTATTAGATTCTGTTTCTACCTTCTCTACTGATTCCTATCATCCGGATGAGAATTGGTATCTTGACTCGGGCGCCACTCACCATATGACTCCAGATGCGTCGTCTCTTCAAACTTTGATGCCATACAATGGTGGTGAACAAGTCACGGTAGGAAATGGTAAGCAAATTGACATCTCTCATGTTGGTACTTCCTTTCTATCCTCTTTTCATAAACCAGTCTATCTTGATGCTGTCTTATATACTCCTGCTATTTCAAAAAAACTTATTAGTGTTGCCCGTTTGTGTAAAGATAACAAAGCCTATGTTGAATTCTATTCCTCTTTTTTTCTTGTTAAGGACATTCGCTCCAAGCAAATCCTTCTCCAGGGCACTCTTAAAGATGGCTTATATAGGTTGTCTCCTGCTGCCTCCAATACTTCAGCTTCTACATCAAGTTTTTCATCCATTTCTAATGTTGTTGCCCTTTTGTCAACCACATCTACGGCTCCAAATTGGCACATCCGATTGGGGCATCCAGCTGCATCAACTCTGTGGCAAATTTTATCTTTATGTCAAATCTCTTGCTCAAGTGTCAATGACTTTTGTAATTCGTGTCAGTTAGCTAAGAGTCACCGTTTACCTTTTTCATTATCTGAATCTATGTCTACTGAACCTTTCCAGTTAATTCATTCCGATGTATGGGGACCTTCCCCACATGTTTCTATTAATGGAGCTAGATACTTTTTGTTGTTTGTGGATGACTTTTCTCGCTTTACTTGGCTTTATTTGTTGAAAACAAAAGATGAGGTGTTCCCTTGTTTCCTTCATTTTAAAAAGTATGTTGAGGTTCAATTTAATACTCGCATTAAGAGTATGCAAACTGATTGGGGAGGCGAGTTTCGTCGTGTCTCTTCCTTTTTATCTTCTAATGGCATTATTCATCGAGTGGCTTGTCCTCATACTCCTCAACAAAATGGGCGGGTTGAGCGCAAAAATAGACATATTGTTGAAATCGGTTTATCTCTTCTTGCTCACTCTAGCTTGCCTTTGTCTTTTTGGAGTTATGCTTTTCAAACTGCGGTTTATCTTATTAATCGTTTGCCTACTAGTGTTCTTCATTCTCAATGTCCTTATCAAGTCCTTTATGATCGTTTACCTGATTATTCTTTGCTTCGTAGTTTTGGTTGCGCTTGTTTTCCTTTTCTTCGGCCATATAATGCTCATAAACTTCTTTTTCGCTCAAAAGAATGCATTTTCATTGGGTATAGCTCTAATCATAAGGGATATTTATGCCTCGATCCATCTTCGGGTCGTCTCTATGTATCTCGTCATGTTATTTTCAATGAAAATGTGTTTCCCTGCTCTCAAAGAGATTTTACTTTCGGCTCTGTTAAATACCCCCCTCCAGATCAATTTTTTCACTCTTCTGCTCTGTTTCTAATTTTTTCCTCTTCTCCAGTGGCTTTTCCACCTTCTTCACCTACTCCGTCCATGTCTTTATCTCATCCTCCCGACTTCTCTTCCTTGTCGTGCACTAGTGTTCACCATCAGTCAGCATCTAAGATTGACGCCTCTGCTGTTTCCCCATTTTCCTCTCTTTCGGCCCCTTCTATCCAATCACCAGTTCTTTCTTCACCCAATCCTTCTGCTACTGCTTCGGCACAATTAATACAGCCTAACCAATCTGCTTCTTTGGCTTCTTCTTCACCCATTTGTGCTTCCGCATCTGATCTCTATTTTTTGTCTGCTGATGTTCCCTCCCAACTCCCACCTTCGGATGCATCTCCCCCTTCTCTACCTTATCATCCACCAGCTCCTCTCTCTAATTTGCATCCTATGATTACCCGTGCCAAAGCTGGAATAACTAAACCAAAATGTTGGCTATCTACTTCTCCCATCCCTCCTTCCATTACCGAACCCTCATCTTTCAGGATGGCGGTAAAACAGGTTGAATGGTGTGAAGCTATGGAGAAAGAGTTTGCAGCTTTGGTTTCTAATAAGACATGGACTCTTGTTCCTCCTTCCAATGCTTATAAAGTCATCAGTTGTAAATGGCCCAGTATAAAGCCGTCTACTATTCGTATAGTGTTGTCTCTTGCTGTTCGGTTTAACTGGGCCATTAAACAATTGGATGTTCATAATGCTTTTCTGAATGGGGATCTTCATGAGGATGTGTACATGTATCAACCTCCTGGTTTTGTTGATAAAAATCGACCCGAGCATGTGTGTAAATTGCAAAAGGCTTTATATGGTTTAAAGCAAAGTCCTCGTGAATGGTTTATGAAACTGAGTACATGTCTTCTGCAGTGGGATTTTAAGGCTTCTAAATCTGATAAATCTATGTTTGTGCTTAACAAAGATTCAGTTTTGGTGATTATTTTGGTTTATGTTGATGATATCTTGGTTACAGGAAATAATTTAGCGTTCATTCAGAAATTTATTAAGTCTCTAAACGAGTTGTTTGCTCTCAAAGATCTTGGTGACTTGTCATATTTTTTGGGCATTGAGGTTCGTCGAGATTCTAATTCATTACATTTATCTCAAAGCAAGTATTTTCATGATATCCTCCAACGAGCAGCAATGCAGGACTGTAAGCCAATTGCTACTCCTATGGCTAGTGGTATGATTATGTCTATAAATGATGGTGAGTTGTTGTCGGATCCTAAACAATATAGAAGCCTTGTTGGTGCTCTTCAGTATTGCACTTTAACTCGTCCTGATCTGAGTTTTGTGGTTAACAAAGTTTGTCAATTTCTTCATGCTCCTACTTCAGTACACTGGCTTGCAGTTAAACGCATTCTTCGTTATTTGAAGGCCACTCACCATCATTTAACAAATTTGTCATCAATTGGTGGTGTCCCAATTGTTGACGCTCGGTCCAAAATCAAGAAAGGCGTTGAAGTATTCAAAGTCGTCAACGAAGATCTGCGGCGAGGTCAGTTCGCGAGCAGCGTCGATGCGAGCAGTCTGTTGGCAGCGAGCAGCGTCTGCGGTGTGGTCAGTTTGCGAGCAGGTCTCGTTCGTTTCGTGCCAGATCCAGATCTCGTTAGTTTCGCGCCAGATCCCTCGTTCGATCCAGGTCAGTTTGTTTCGCTCCCGATGTTTGTAGCCCTGCCGTTGAAACGCTCGCCTGCCGCCATAGCCCCACCGTCGTCATAG

Protein sequence

MTTGESSSSSSLGPVVTPVVSPSTPITTPVITPIAQRPTTDPSNPSVLPRVAAPVFPPANQSPTHPRAPQSQPAFTPYQPQQYPYPTATTQPFYPTSNFFPRAPYPAPPTFSQTAPPNTYQNPFGPSPFPTLPQPLAVKLNDNNFLLWKNQLLNAVLANGLHGFLDGSIPTPPKFLDTQQMQLNPDFLTWERYNRLIMCWMYSSLSEEKMGEIVSLETAFDIWNSLKRAYDSKTTARIMGLKTQLQKIKKEGLPVSQYLAQIKEVADKFAAIGEPISYRDHLAHILDSLGSEYNAFVTTIQNRTDNPALEDVRSLLLAYEARLEKQNVVEQLNVAQANLSTLHLQPVHLRPSHQSRSSSTTSYRPPFNPSPMPFSSPPVFSSSILGKPQSSPSQNRSPRNNSSKPQCQICGKFGHIALICHHHTNLAYQTPPLQALLTTTQPAVPSPLLDSVSTFSTDSYHPDENWYLDSGATHHMTPDASSLQTLMPYNGGEQVTVGNGKQIDISHVGTSFLSSFHKPVYLDAVLYTPAISKKLISVARLCKDNKAYVEFYSSFFLVKDIRSKQILLQGTLKDGLYRLSPAASNTSASTSSFSSISNVVALLSTTSTAPNWHIRLGHPAASTLWQILSLCQISCSSVNDFCNSCQLAKSHRLPFSLSESMSTEPFQLIHSDVWGPSPHVSINGARYFLLFVDDFSRFTWLYLLKTKDEVFPCFLHFKKYVEVQFNTRIKSMQTDWGGEFRRVSSFLSSNGIIHRVACPHTPQQNGRVERKNRHIVEIGLSLLAHSSLPLSFWSYAFQTAVYLINRLPTSVLHSQCPYQVLYDRLPDYSLLRSFGCACFPFLRPYNAHKLLFRSKECIFIGYSSNHKGYLCLDPSSGRLYVSRHVIFNENVFPCSQRDFTFGSVKYPPPDQFFHSSALFLIFSSSPVAFPPSSPTPSMSLSHPPDFSSLSCTSVHHQSASKIDASAVSPFSSLSAPSIQSPVLSSPNPSATASAQLIQPNQSASLASSSPICASASDLYFLSADVPSQLPPSDASPPSLPYHPPAPLSNLHPMITRAKAGITKPKCWLSTSPIPPSITEPSSFRMAVKQVEWCEAMEKEFAALVSNKTWTLVPPSNAYKVISCKWPSIKPSTIRIVLSLAVRFNWAIKQLDVHNAFLNGDLHEDVYMYQPPGFVDKNRPEHVCKLQKALYGLKQSPREWFMKLSTCLLQWDFKASKSDKSMFVLNKDSVLVIILVYVDDILVTGNNLAFIQKFIKSLNELFALKDLGDLSYFLGIEVRRDSNSLHLSQSKYFHDILQRAAMQDCKPIATPMASGMIMSINDGELLSDPKQYRSLVGALQYCTLTRPDLSFVVNKVCQFLHAPTSVHWLAVKRILRYLKATHHHLTNLSSIGGVPIVDARSKIKKGVEVFKVVNEDLRRGQFASSVDASSLLAASSVCGVVSLRAGLVRFVPDPDLVSFAPDPSFDPGQFVSLPMFVALPLKRSPAAIAPPSS
Homology
[Close]
BLAST of Lag0005240 vs. NCBI nr
Match: RVW64314.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 994.2 bits (2569), Expect = 1.2e-285
Identity = 562/1292 (43.50%), Postives = 768/1292 (59.44%), Query Frame = 0 

Query: 132  LPQPLAVKLNDNNFLLWKNQLLNAVLANGLHGFLDGSIPTPPKFLDTQQMQLNPDFLTWE 191
            L   L +KL+ NN++LW+ Q+ N V ANG    ++G    PP+   T   + NPDF+ W 
Sbjct: 28   LNHALPIKLDRNNYILWRTQMENVVFANGFEDHIEGLKICPPQ--KTSSGETNPDFVMWR 87

Query: 192  RYNRLIMCWMYSSLSEEKMGEIVSLETAFDIWNSLKRAYDSKTTARIMGLKTQLQKIKKE 251
            R++R+I+ W+YSSL+ E MG+IV  +++   W +L+R + + + AR+M L+ + Q  +K 
Sbjct: 88   RFDRMILSWIYSSLTPEIMGQIVGYQSSHAAWFALERIFSASSRARVMQLRLEFQTTRKG 147

Query: 252  GLPVSQYLAQIKEVADKFAAIGEPISYRDHLAHILDSLGSEYNAFVTTIQNRTDNPALED 311
             L + +Y+ ++K +AD  AAIGEP++ RD +  +L  LG++YN+ V ++  R D  +L  
Sbjct: 148  SLTMMEYILKLKSLADNLAAIGEPVTDRDQILQLLGGLGADYNSIVASLTAREDEMSLHS 207

Query: 312  VRSLLLAYEARLEKQNVVEQLNVAQANLSTLHLQPV-HLRPSHQSRSSSTTSYRPPFNPS 371
            V S+LL +E RL  QN V + NV  ANL+T   Q   + R S Q+R S   + R      
Sbjct: 208  VHSILLTHEQRLSFQNSVAEDNVISANLATPQYQHFNNKRSSGQNRQSGFNTRR------ 267

Query: 372  PMPFSSPPVFSSSILGKPQSSPSQNRSPRNNSSKPQCQICGKFGHIALICHHHTNLAYQ- 431
                        +  G+ QSS            +PQCQ+CGKFGH  + C+H  ++ +Q 
Sbjct: 268  -----------GTNGGRSQSS----------QHRPQCQLCGKFGHTVVRCYHRFDINFQG 327

Query: 432  TPPLQALLTTTQPAVPSPLLDSVSTFSTDSYHPDENWYLDSGATHHMTPDASSLQTLMPY 491
              P    + T +P   + +   +++ ST S   DE W+ D+GATHH++     L  + PY
Sbjct: 328  YNPNMDTVQTNKPNAKNQVQAMMASPSTIS---DEAWFFDTGATHHLSQSIDPLSDVQPY 387

Query: 492  NGGEQVTVGNGKQIDISHVGTSFLSSFHKPVYLDAVLYTPAISKKLISVARLCKDNKAYV 551
             G ++V VGNGK + I H GT+F  S  K   L  VL+ P I+  LISV++ C DN  + 
Sbjct: 388  MGNDKVIVGNGKHLRILHTGTTFFPSSSKTFQLRQVLHVPDIATNLISVSQFCADNNTFF 447

Query: 552  EFYSSFFLVKDIRSKQILLQGTLKDGLYRLSP--AASNTSASTSSFSSISNVVALLSTTS 611
            EF+  FF VKD  +K+ILLQG+L+ GLYR       S  +  +SS+   SN    LS T+
Sbjct: 448  EFHPRFFFVKDQVTKKILLQGSLEHGLYRFPARFVPSPAAFVSSSYDRSSN----LSLTT 507

Query: 612  TAPNWHIRLGHPAASTLWQILSLCQIS--CSSVNDFCNSCQLAKSHRLPFSLSESMSTEP 671
            T   WH RLGHPA + L  IL+ C IS  C   N+ C +CQ AKSH+LPF++S S ++ P
Sbjct: 508  TTTLWHSRLGHPANNILKHILTSCNISHQCHK-NNVCCACQFAKSHKLPFNVSVSRASHP 567

Query: 672  FQLIHSDVWGPSPHVSINGARYFLLFVDDFSRFTWLYLLKTKDEVFPCFLHFKKYVEVQF 731
              L+H+D+WGP+   S  GARYF+LFVDDFSRF+W+Y L +KD+    F+ FK  VE QF
Sbjct: 568  LALLHADLWGPASIPSTTGARYFILFVDDFSRFSWIYPLHSKDQALSVFIKFKSLVENQF 627

Query: 732  NTRIKSMQTDWGGEFRRVSSFLSSNGIIHRVACPHTPQQNGRVERKNRHIVEIGLSLLAH 791
            N+RI+ +++D GGEF+  SS+L+++GI  + +CP+TP+QNGR ERK RHI+E GL+LLA 
Sbjct: 628  NSRIQCLRSDNGGEFKAFSSYLATHGIKSQFSCPYTPEQNGRAERKLRHIIETGLALLAT 687

Query: 792  SSLPLSFWSYAFQTAVYLINRLPTSVLHSQCPYQVLYDRLPDYSLLRSFGCACFPFLRPY 851
            +SLP  FW YAF TA++LINRLPT VL+ Q P+Q+L+ + P+Y + + FGC C+P++RPY
Sbjct: 688  ASLPFKFWLYAFHTAIFLINRLPTKVLNYQSPFQILFGKSPNYHIFKIFGCLCYPYIRPY 747

Query: 852  NAHKLLFRSKECIFIGYSSNHKGYLCLDPSSGRLYVSRHVIFNENVFPCSQRDFTFGSVK 911
            N +KL +RS +C+F+GYSSNHKGY+CL+P +GRLYV+RHV+F+E VFP            
Sbjct: 748  NKNKLSYRSSQCVFLGYSSNHKGYMCLNPLTGRLYVTRHVVFHETVFPFQS--------- 807

Query: 912  YPPPDQFFHSSALFLIFSSSPVAFPPSSPTPSMSLSHPPDFSSLSCTSVHHQSASKIDAS 971
               PDQ           SSS V      PTP+           L C+S            
Sbjct: 808  --TPDQ-----------SSSVVTI----PTPAF----------LPCSS-----------P 867

Query: 972  AVSPFSSLSAPSIQSPVLSSPNPSATASAQLIQPNQSASLASSSPICASASDLYFLSADV 1031
             VS   S + PS  SP L++  PS+T S   +     A +++S P               
Sbjct: 868  PVSSLRSHTTPSTSSPPLTN-MPSSTISLPDLIQVPFADISTSEP--------------- 927

Query: 1032 PSQLPPSDASPPSLPYHPPAPLSNLHPMITRAKAGITKPKCWLSTSPIPPSITEPSSFRM 1091
                            HP    +N HPM+TRAK GI+K K + S+      I+EP++F  
Sbjct: 928  ----------------HP----TNQHPMVTRAKNGISKKKVYFSS-----HISEPTTFTQ 987

Query: 1092 AVKQVEWCEAMEKEFAALVSNKTWTLVPPSNAYKVISCKW-------------------- 1151
            AVK   W  AMEKEF+AL  N TW LVPP +   +I CKW                    
Sbjct: 988  AVKDSNWVLAMEKEFSALQRNNTWHLVPPPSNGNIIGCKWVYKLKYKPDGTVDRYKARLV 1047

Query: 1152 -----------------PSIKPSTIRIVLSLAVRFNWAIKQLDVHNAFLNGDLHEDVYMY 1211
                             P +K STIRI+L++A+ FNW++ QLDV NAFL+GDL E V+M 
Sbjct: 1048 AQGFTQTLGLDYFETFSPVVKASTIRIILAVALSFNWSVHQLDVQNAFLHGDLEEHVFMQ 1107

Query: 1212 QPPGFVDKNRPEHVCKLQKALYGLKQSPREWFMKLSTCLLQWDFKASKSDKSMFVLNKDS 1271
            QPPGF++   P HVCKL KALYGLKQ+PR W+ KLST LL W F+AS++D SMF+ +   
Sbjct: 1108 QPPGFINSQYPSHVCKLNKALYGLKQAPRAWYNKLSTSLLGWGFQASRADSSMFIHHSTH 1167

Query: 1272 VLVIILVYVDDILVTGNNLAFIQKFIKSLNELFALKDLGDLSYFLGIEVRRDSNSLHLSQ 1331
             ++I+L+YVDDILVTG++ A +  FI  LN  FAL+DLG ++YFLGIEV R     HLSQ
Sbjct: 1168 DVLILLIYVDDILVTGSSSAQVSSFITRLNSSFALRDLGYVNYFLGIEVVRSGTMFHLSQ 1194

Query: 1332 SKYFHDILQRAAMQDCKPIATPMASGMIMSINDGELLSDPKQYRSLVGALQYCTLTRPDL 1381
             KY  D+L R AM D KP  TP   G  +S  DGE  SD   YRS VGALQY TLTRPD+
Sbjct: 1228 HKYTQDLLSRTAMLDSKPATTPGLLGQTLSHLDGEPFSDATLYRSTVGALQYLTLTRPDI 1194

[Close]
BLAST of Lag0005240 vs. NCBI nr
Match: RVX06084.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 989.6 bits (2557), Expect = 3.0e-284
Identity = 560/1292 (43.34%), Postives = 766/1292 (59.29%), Query Frame = 0 

Query: 132  LPQPLAVKLNDNNFLLWKNQLLNAVLANGLHGFLDGSIPTPPKFLDTQQMQLNPDFLTWE 191
            L   L +KL+ NN++LW+ Q+ N V ANG    ++G    PP+   T   + NPDF+ W 
Sbjct: 135  LNHALPIKLDRNNYILWRTQMENVVFANGFEDHIEGLKICPPQ--KTSSGETNPDFVMWR 194

Query: 192  RYNRLIMCWMYSSLSEEKMGEIVSLETAFDIWNSLKRAYDSKTTARIMGLKTQLQKIKKE 251
            R++R+I+ W+YSSL+ E MG+IV  +++   W +L+R + + + AR+M L+ + Q  +K 
Sbjct: 195  RFDRMILSWIYSSLTPEIMGQIVGYQSSHAAWFALERIFSASSRARVMQLRLEFQTTRKG 254

Query: 252  GLPVSQYLAQIKEVADKFAAIGEPISYRDHLAHILDSLGSEYNAFVTTIQNRTDNPALED 311
             L + +Y+ ++K +AD  AAIGEP++ RD +  +L  LG++YN+ V ++  R D  +L  
Sbjct: 255  SLTMMEYILKLKSLADNLAAIGEPVTDRDQILQLLGGLGADYNSIVASLTAREDEMSLHS 314

Query: 312  VRSLLLAYEARLEKQNVVEQLNVAQANLSTLHLQPV-HLRPSHQSRSSSTTSYRPPFNPS 371
            V S+LL +E RL  QN V + NV  ANL+T   Q   + R S Q+R S   + R      
Sbjct: 315  VHSILLTHEQRLSFQNSVAEDNVISANLATPQYQHFNNKRSSGQNRQSGFNTRR------ 374

Query: 372  PMPFSSPPVFSSSILGKPQSSPSQNRSPRNNSSKPQCQICGKFGHIALICHHHTNLAYQ- 431
                        +  G+ QSS            +PQCQ+CGKFGH  + C+H  ++ +Q 
Sbjct: 375  -----------GTNGGRSQSS----------QHRPQCQLCGKFGHTVVRCYHRFDINFQG 434

Query: 432  TPPLQALLTTTQPAVPSPLLDSVSTFSTDSYHPDENWYLDSGATHHMTPDASSLQTLMPY 491
              P    + T +P   + +   +++ ST S   DE W+ D+GATHH++     L  + PY
Sbjct: 435  YNPNMDTVQTNKPNAKNQVQAMMASPSTIS---DEAWFFDTGATHHLSQSIDPLSDVQPY 494

Query: 492  NGGEQVTVGNGKQIDISHVGTSFLSSFHKPVYLDAVLYTPAISKKLISVARLCKDNKAYV 551
             G ++V VGNGK + I H GT+F  S  K   L  VL+ P I+  LISV++ C DN  + 
Sbjct: 495  MGNDKVIVGNGKHLRILHTGTTFFPSSSKTFQLRQVLHVPDIATNLISVSQFCADNNTFF 554

Query: 552  EFYSSFFLVKDIRSKQILLQGTLKDGLYRLSP--AASNTSASTSSFSSISNVVALLSTTS 611
            EF+  FF VKD  +K+ILLQG+L+ GLYR       S  +  +SS+   SN    LS T+
Sbjct: 555  EFHPRFFFVKDQVTKKILLQGSLEHGLYRFPARFVPSPAAFVSSSYDRSSN----LSLTT 614

Query: 612  TAPNWHIRLGHPAASTLWQILSLCQIS--CSSVNDFCNSCQLAKSHRLPFSLSESMSTEP 671
            T   WH RLGHPA + L  IL+ C IS  C   N+ C +CQ AKSH+LPF++S S ++ P
Sbjct: 615  TTTLWHSRLGHPADNILKHILTSCNISHQCHK-NNVCCACQFAKSHKLPFNVSVSRASHP 674

Query: 672  FQLIHSDVWGPSPHVSINGARYFLLFVDDFSRFTWLYLLKTKDEVFPCFLHFKKYVEVQF 731
              L+H+D+WGP+   S  GARYF+LFVDDFSRF+W+Y L +KD+    F+ FK  VE QF
Sbjct: 675  LALLHADLWGPASIPSTTGARYFILFVDDFSRFSWIYPLHSKDQALSVFIKFKSLVENQF 734

Query: 732  NTRIKSMQTDWGGEFRRVSSFLSSNGIIHRVACPHTPQQNGRVERKNRHIVEIGLSLLAH 791
            N+RI+ +++D GGEF+  SS+L+++GI  + +CP+TP+QNGR ERK RHI+E GL+LLA 
Sbjct: 735  NSRIQCLRSDNGGEFKAFSSYLATHGIKSQFSCPYTPEQNGRAERKLRHIIETGLALLAT 794

Query: 792  SSLPLSFWSYAFQTAVYLINRLPTSVLHSQCPYQVLYDRLPDYSLLRSFGCACFPFLRPY 851
            +SLP  FW YAF T ++LINRLPT VL+ Q P+Q+L+ + P+Y + + FGC C+P++RPY
Sbjct: 795  ASLPFKFWLYAFHTTIFLINRLPTKVLNYQSPFQILFGKSPNYHIFKIFGCLCYPYIRPY 854

Query: 852  NAHKLLFRSKECIFIGYSSNHKGYLCLDPSSGRLYVSRHVIFNENVFPCSQRDFTFGSVK 911
            N +KL +RS +C+F+GYSSNHKGY+CL+P +GRLYV+RHV+F+E VFP            
Sbjct: 855  NKNKLSYRSSQCVFLGYSSNHKGYMCLNPLTGRLYVTRHVVFHETVFPFQS--------- 914

Query: 912  YPPPDQFFHSSALFLIFSSSPVAFPPSSPTPSMSLSHPPDFSSLSCTSVHHQSASKIDAS 971
               PDQ           SSS V      PTP+           L C+S            
Sbjct: 915  --TPDQ-----------SSSVVTI----PTPAF----------LPCSS-----------P 974

Query: 972  AVSPFSSLSAPSIQSPVLSSPNPSATASAQLIQPNQSASLASSSPICASASDLYFLSADV 1031
             VS   S + PS  SP L++  PS+T S   +     A +++S P               
Sbjct: 975  PVSSLRSHTTPSTSSPPLTN-MPSSTISLPDLIQVPFADISTSEP--------------- 1034

Query: 1032 PSQLPPSDASPPSLPYHPPAPLSNLHPMITRAKAGITKPKCWLSTSPIPPSITEPSSFRM 1091
                            HP    +N HPM+TRAK GI+K K + S+      I+EP++F  
Sbjct: 1035 ----------------HP----TNQHPMVTRAKNGISKKKVYFSS-----HISEPTTFTQ 1094

Query: 1092 AVKQVEWCEAMEKEFAALVSNKTWTLVPPSNAYKVISCKW-------------------- 1151
            AVK   W  AMEKEF+AL  N TW LVPP +   +I CKW                    
Sbjct: 1095 AVKDSNWVLAMEKEFSALQRNNTWHLVPPPSNGNIIGCKWVYKLKYKPDGTVDRYKARLV 1154

Query: 1152 -----------------PSIKPSTIRIVLSLAVRFNWAIKQLDVHNAFLNGDLHEDVYMY 1211
                             P +K STIRI+L++A+ FNW++ QLDV NAFL+GDL E V+M 
Sbjct: 1155 AQGFTQTLGLDYFETFSPVVKASTIRIILAVALSFNWSVHQLDVQNAFLHGDLEEHVFMQ 1214

Query: 1212 QPPGFVDKNRPEHVCKLQKALYGLKQSPREWFMKLSTCLLQWDFKASKSDKSMFVLNKDS 1271
            QPPGF++   P HVCKL KALYGLKQ+PR W+ KLST LL W F+AS++D SMF+ +   
Sbjct: 1215 QPPGFINSQYPSHVCKLNKALYGLKQAPRAWYNKLSTSLLGWGFQASRADSSMFIHHSTH 1274

Query: 1272 VLVIILVYVDDILVTGNNLAFIQKFIKSLNELFALKDLGDLSYFLGIEVRRDSNSLHLSQ 1331
             ++I+L+YVDDILVTG++ A +  FI  LN  FAL+DLG ++YFLGIEV       HLSQ
Sbjct: 1275 DVLILLIYVDDILVTGSSSAQVSSFITRLNYSFALRDLGYVNYFLGIEVVSSGTMFHLSQ 1301

Query: 1332 SKYFHDILQRAAMQDCKPIATPMASGMIMSINDGELLSDPKQYRSLVGALQYCTLTRPDL 1381
             KY  D+L R AM D KP  TP   G  +S  DGE  SD   YRS VGALQY TLTRPD+
Sbjct: 1335 HKYTQDLLSRTAMLDSKPATTPGLLGQTLSHLDGEPFSDATLYRSTVGALQYLTLTRPDI 1301

[Close]
BLAST of Lag0005240 vs. NCBI nr
Match: CAN79148.1 (hypothetical protein VITISV_004343 [Vitis vinifera])

HSP 1 Score: 963.8 bits (2490), Expect = 1.8e-276
Identity = 550/1308 (42.05%), Postives = 757/1308 (57.87%), Query Frame = 0 

Query: 131  TLPQPLAVKLNDNNFLLWKNQLLNAVLANGLHGFLDGSIPTPPKFLDTQQMQLNPDFLTW 190
            +L   L +KL+ +N++LWK Q+ N V ANG   +++G+   PPK L T    LNPDF+ W
Sbjct: 25   SLNHALPIKLDRSNYILWKTQMENVVYANGFEDYIEGTKSCPPKELPTG--DLNPDFVQW 84

Query: 191  ERYNRLIMCWMYSSLSEEKMGEIVSLETAFDIWNSLKRAYDSKTTARIMGLKTQLQKIKK 250
             R++R+++ WMYS+L+ + MG+IV  +T+ + W +L + + + + ARIM L+ + Q  KK
Sbjct: 85   RRFDRMVLSWMYSTLNPDIMGQIVGFQTSHEAWMALHKIFSASSKARIMQLRLEFQTTKK 144

Query: 251  EGLPVSQYLAQIKEVADKFAAIGEPISYRDHLAHILDSLGSEYNAFVTTIQNRTDNPALE 310
             G  +  Y+ ++K ++D  AA+GEP+  RDH+  +L  LG +YN+ V ++  R D+ +L 
Sbjct: 145  GGDAMLDYILKMKTISDNLAAVGEPVKERDHILQLLGGLGPDYNSIVASLTAREDDLSLH 204

Query: 311  DVRSLLLAYEARLEKQ-NVVEQLNVAQANLSTLHL-------QPVHL----RPSHQSRSS 370
             V S+LL +E RL  Q +     + A A++++          QP H     RP HQ+ SS
Sbjct: 205  SVHSILLTHEQRLHLQHSSPTDPSFASAHMASXPSRQPNRPHQPRHYHHPSRPQHQASSS 264

Query: 371  STTSYRPP--FNPSPMPFSSPPVFSSSILGKPQSSPSQNRSPRNNSSKPQCQICGKFGHI 430
            S    RPP  F+P   P ++ P+            PS +  P + S++PQCQ+CGKFGH 
Sbjct: 265  SN---RPPTRFHPQ-QPRNNHPI------------PSAHNKPHHLSTRPQCQLCGKFGHT 324

Query: 431  ALICHHHTNLAYQTPPLQALLTTTQPAVPSPLLDSVSTFSTDSYHPDENWYLDSGATHHM 490
            A+ C+H  ++ YQ            P   +P   ++   + D  H D +W+ D+GATHH+
Sbjct: 325  AIKCYHRFDINYQG-------NNGVPLAQAPFSHAMXAAAPD--HQD-SWFFDTGATHHL 384

Query: 491  TPDASSLQTLMPYNGGEQVTVGNGKQIDISHVGTSFLSSFHKPVYLDAVLYTPAISKKLI 550
            +  A +L  + PY+G +QVT+G+G  + I + GT       K   L+ VL+ P +S  LI
Sbjct: 385  SHSAQTLSCVQPYSGTDQVTIGDGNSLPILNTGTKSFFFPSKTFSLNQVLHVPHLSTNLI 444

Query: 551  SVARLCKDNKAYVEFYSSFFLVKDIRSKQILLQGTLKDGLYRLSPAA-SNTSASTSSFSS 610
            SV++ C DN  + EF+SS F VKD  +K+ILL+G L+DGLY  S ++      +T SFS 
Sbjct: 445  SVSKFCTDNAVFFEFHSSCFFVKDQVTKKILLKGWLRDGLYEFSSSSPPRAFVTTGSFSD 504

Query: 611  ISNVVALLSTTSTAPNWHIRLGHPAASTLWQILSLCQISCS-SVNDF--CNSCQLAKSHR 670
                            WH RLGHPA   L + L+ C  S +  +N    C  C LAKSH 
Sbjct: 505  -------------GAIWHSRLGHPAVPILSKALASCNPSVTLQINKIAPCIICPLAKSHS 564

Query: 671  LPFSLSESMSTEPFQLIHSDVWGPSPHVSINGARYFLLFVDDFSRFTWLYLLKTKDEVFP 730
            LP+SLS S ++ P  LIH+D+WGP+P  SI GARYFL+F+DD+SR TW+Y L TKD+   
Sbjct: 565  LPYSLSSSHASHPLALIHTDLWGPAPSTSITGARYFLIFIDDYSRHTWIYFLSTKDQALQ 624

Query: 731  CFLHFKKYVEVQFNTRIKSMQTDWGGEFRRVSSFLSSNGIIHRVACPHTPQQNGRVERKN 790
             F+ F+K VE Q  T IK +Q+D GGEF     +L ++GI+H+ +CPHTPQQNGR ERK 
Sbjct: 625  SFITFRKMVENQLQTTIKCIQSDNGGEFLAFKPYLEAHGILHQFSCPHTPQQNGRAERKI 684

Query: 791  RHIVEIGLSLLAHSSLPLSFWSYAFQTAVYLINRLPTSVLHSQCPYQVLYDRLPDYSLLR 850
            RH+VE GL+L+A S LP  +W+YAFQTAVYLIN LP  +LH Q P Q L+ +LP+Y  LR
Sbjct: 685  RHLVETGLALMAQSFLPSKYWTYAFQTAVYLINLLPAKLLHFQSPTQTLFHKLPNYHHLR 744

Query: 851  SFGCACFPFLRPYNAHKLLFRSKECIFIGYSSNHKGYLCLDPSSGRLYVSRHVIFNENVF 910
             FGC CFP LRPY  HKL +RS  C+F+GY+  HKGYLCLD S+ R+Y+SR+VIF+E+ F
Sbjct: 745  VFGCLCFPSLRPYTQHKLCYRSTACVFLGYAPAHKGYLCLDVSTNRIYISRNVIFHESSF 804

Query: 911  PCSQRDFTFGSVKYPPPDQFFHSSALFLIFSSSPVAFPPSSPTPSMSLSHPPDFSSLSCT 970
            P                   F SS+            PPSSP+P +  S P         
Sbjct: 805  P-------------------FQSSS------------PPSSPSPHLPSSTP--------- 864

Query: 971  SVHHQSASKIDASAVSPFSSLSAPSIQSPVLSSPNPSATASAQLIQPNQSASLASSSPIC 1030
                                     I SP LS+P                +S A SSPI 
Sbjct: 865  -----------------------ALINSPSLSAP----------------SSPAVSSPII 924

Query: 1031 ASASDLYFLSADVPSQLP-PSDASPPSLPYHPPAPLSNLHPMITRAKAGITKPKCWLSTS 1090
             S S         P  +P P   S P+ P  PP PL N HPM+TRAK+GI K +     S
Sbjct: 925  TSDS--------XPPLIPVPFATSSPAAPSPPPLPL-NTHPMVTRAKSGIHKKR-----S 984

Query: 1091 PIPPSITEPSSFRMAVKQVEWCEAMEKEFAALVSNKTWTLVPPSNAYKVISCKW------ 1150
             I    TEP ++  A K   W +AM  E+ AL+ N TW+LVPP ++  ++ C+W      
Sbjct: 985  FIVQHTTEPRTYSQAXKNDSWVQAMNSEYQALLRNNTWSLVPPPSSAHIVGCRWIYKLKY 1044

Query: 1151 -------------------------------PSIKPSTIRIVLSLAVRFNWAIKQLDVHN 1210
                                           P +KP TIR++L+LAV F W+++QLDV N
Sbjct: 1045 RPDGSIDRHKARLVAQGFTQTPGIDYFDTFSPVVKPCTIRLILALAVSFQWSVRQLDVEN 1104

Query: 1211 AFLNGDLHEDVYMYQPPGFVDKNRPEHVCKLQKALYGLKQSPREWFMKLSTCLLQWDFKA 1270
             FLNGDL E+V+M QP GFV+   P +VCKL KALYGLKQ+PR WF KL   LL + F++
Sbjct: 1105 GFLNGDLEEEVFMTQPQGFVNPTYPTYVCKLHKALYGLKQAPRAWFQKLRIALLDYGFQS 1164

Query: 1271 SKSDKSMFVLNKDSVLVIILVYVDDILVTGNNLAFIQKFIKSLNELFALKDLGDLSYFLG 1330
            S++D S+F+ +  + ++I+LVYVDDILVTG+N   +  FI  L   FAL+DLG LSYFLG
Sbjct: 1165 SRADTSLFIFHTATDILILLVYVDDILVTGSNPMLVSHFISYLRTKFALRDLGPLSYFLG 1198

Query: 1331 IEVRRDSNSLHLSQSKYFHDILQRAAMQDCKPIATPMASGMIMSINDGELLSDPKQYRSL 1383
            I+ ++  + LHL+Q KY  D+L R  M+  KP  TP   G  +S +DG  LSDP +YR  
Sbjct: 1225 IQAQQLGSVLHLNQHKYIADLLNRTQMETSKPAPTPGRLGRTLSQSDGMSLSDPSEYRRT 1198

[Close]
BLAST of Lag0005240 vs. NCBI nr
Match: RVW18104.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera])

HSP 1 Score: 962.2 bits (2486), Expect = 5.1e-276
Identity = 552/1308 (42.20%), Postives = 759/1308 (58.03%), Query Frame = 0 

Query: 129  FPTLPQPLAVKLNDNNFLLWKNQLLNAVLANGLHGFLDGSIPTPPKFLDTQQMQLNPDFL 188
            +  L   L VKL+  N++LW++Q+ N + ANG   F+DG+   P K  + +  ++NP F+
Sbjct: 26   YQMLNYSLPVKLDRTNYILWRSQIDNVIFANGFEDFIDGTSVCPEK--ELRPGEINPAFV 85

Query: 189  TWERYNRLIMCWMYSSLSEEKMGEIVSLETAFDIWNSLKRAYDSKTTARIMGLKTQLQKI 248
             W R +R I+ W+YSSL+   M +I+   ++   WN+L++ + S + ARIM L+ + Q  
Sbjct: 86   AWRRQDRTILSWIYSSLTPGIMAQIIGHNSSHSAWNALEKIFSSCSRARIMQLRLEFQST 145

Query: 249  KKEGLPVSQYLAQIKEVADKFAAIGEPISYRDHLAHILDSLGSEYNAFVTTIQNRTDNPA 308
            KK  + +  Y+ ++K VAD  AAIGE +S +D + ++L  LGS+YNA VT I  R D  +
Sbjct: 146  KKGSMSMIDYIMKVKGVADSLAAIGESVSEQDQIMNLLGGLGSDYNAVVTAITIREDKIS 205

Query: 309  LEDVRSLLLAYEARLEKQNVVEQLNVAQANLSTLHLQPVHLRPSHQSRSSSTTSYRPPFN 368
            LE V S+LLA+E RLE+Q  +EQL    AN +           S  +       Y     
Sbjct: 206  LEAVHSMLLAFEQRLEQQGSIEQLPAMSANYA-----------SSSNNRGGGRKYNGGRG 265

Query: 369  PSPMPFSSPPVFSSSILGKPQSSPSQNRSPRNNSS--KPQCQICGKFGHIALICHHHTNL 428
            P+ M      + +S+  G+ +         +N+SS  +PQCQ+CGKFGH   +C+H  ++
Sbjct: 266  PNFM------MTNSNFRGRGRGGRYGQSGRQNSSSSERPQCQLCGKFGHTVQVCYHRFDI 325

Query: 429  AYQTPPLQALLTTTQPAVPSPLLDSVSTFSTDSYH-PDENWYLDSGATHHMTPDASSLQT 488
             +Q+         T     S   +S+      S +  D+NWYLDSGA+HH+T + ++L  
Sbjct: 326  TFQSTQ-----NNTTGVSNSGNSNSMPAMVASSNNLADDNWYLDSGASHHLTQNVANLTN 385

Query: 489  LMPYNGGEQVTVGNGKQIDISHVGTSFLSSFHKPVYLDAVLYTPAISKKLISVARLCKDN 548
              PY G ++VT+GNGK + IS+ G + L S      L  V + P IS  LISVA+ C DN
Sbjct: 386  ATPYTGADKVTIGNGKHLTISNTGFTRLFSNPHSFQLKKVFHVPFISANLISVAKFCSDN 445

Query: 549  KAYVEFYSSFFLVKDIRSKQILLQGTLKDGLYRLSPAASN--------TSASTSSFSSIS 608
             A +EF+S+ F VKD+ +K++L QG L++GLY+  P  SN        T+ ST   S+I 
Sbjct: 446  NALIEFHSNGFFVKDLHTKRVLAQGKLENGLYKF-PVISNKKTAYVGITNDSTFQCSTIG 505

Query: 609  NVVALLSTTSTAPNWHIRLGHPAASTLWQILSLCQISCSSVN-DFCNSCQLAKSHRLPFS 668
            N   L         WH RLGH A   + +I+  C +SC       C+SCQLAKSHRLP  
Sbjct: 506  NKREL---------WHHRLGHAATDIVTRIMHNCNVSCGKYKATVCSSCQLAKSHRLPTH 565

Query: 669  LSESMSTEPFQLIHSDVWGPSPHVSINGARYFLLFVDDFSRFTWLYLLKTKDEVFPCFLH 728
            LS   +++P +L+++D+WGP+   S +GA+YF+LFVDD+SR+TWLYLL++KD+  P F  
Sbjct: 566  LSSFHASKPLELVYTDIWGPASVTSTSGAKYFILFVDDYSRYTWLYLLQSKDQA-PIFKQ 625

Query: 729  FKKYVEVQFNTRIKSMQTDWGGEFRRVSSFLSSNGIIHRVACPHTPQQNGRVERKNRHIV 788
            FK  VE QF+ +IK +Q+D GGEFR   SFL  +GI+HR +CP+   QNGRVERK+RH+V
Sbjct: 626  FKLQVENQFDAKIKCLQSDNGGEFRSFMSFLQESGILHRFSCPYNSSQNGRVERKHRHVV 685

Query: 789  EIGLSLLAHSSLPLSFWSYAFQTAVYLINRLPTSVLHSQCPYQVLYDRLPDYSLLRSFGC 848
            E GL+LLAH+ LPL FWSYAFQTA +LINR+P+ VL +  PY  L+ R PDY  LR FGC
Sbjct: 686  ETGLALLAHAGLPLKFWSYAFQTATFLINRMPSKVLQNASPYFALFKRNPDYKFLRVFGC 745

Query: 849  ACFPFLRPYNAHKLLFRSKECIFIGYSSNHKGYLCLDPSSGRLYVSRHVIFNENVFPCSQ 908
             C+PF+RPYN HKL +RS +C+F+GYS +HKGYLCLD  +GR+YVS HV+F+E  FP +Q
Sbjct: 746  LCYPFIRPYNNHKLQYRSLKCVFLGYSLHHKGYLCLDNLTGRVYVSPHVVFDETQFPFAQ 805

Query: 909  RDFTFGSVKYPPPDQFFHSSALFLIFSSSPVAFPPSSPTPSMSLSHPPDFSSLSCTSVHH 968
                                    I SS        S  P++ +S  P  S+LS    +H
Sbjct: 806  N-----------------------ISSSPSKDASDESVIPAIIVSSNP--STLSFHGSNH 865

Query: 969  QSASKIDASAVS----PFSSLSAPSIQSPVLSSPNPSATASAQLIQPNQSASLASSSPIC 1028
              AS    SA++    P  + +  S++ PVL +   +  A  Q++ P             
Sbjct: 866  SMASPNLTSALTHPTPPTDTPTTRSLREPVLEA-EVTLPAQQQVVVP------------- 925

Query: 1029 ASASDLYFLSADVPSQLPPSDASPPSLPYHPPAPLSNLHPMITRAKAGITKPKCWLSTSP 1088
                                          PP        + TR+ +GITK K   + + 
Sbjct: 926  ------------------------------PPR-------VTTRSMSGITKRKHIFNLAA 985

Query: 1089 IPPSITEPSSFRMAVKQVEWCEAMEKEFAALVSNKTWTLVPPSNAYKVISCKW------- 1148
                I+EP++ + A+K   W EAM+ E AAL  N+TW LV P     +I CKW       
Sbjct: 986  F--KISEPTTLKQAIKDPNWAEAMQTEIAALHKNQTWDLVDPPKDVNIIGCKWVYKLKYK 1045

Query: 1149 ------------------------------PSIKPSTIRIVLSLAVRFNWAIKQLDVHNA 1208
                                          P +K +TIRIVL++A+ + W ++QLDV NA
Sbjct: 1046 PDGSVDRYKARLVARGFNQTFGLDYFETFSPVVKAATIRIVLTIALSYRWELRQLDVQNA 1105

Query: 1209 FLNGDLHEDVYMYQPPGFVDKNRPEHVCKLQKALYGLKQSPREWFMKLSTCLLQWDFKAS 1268
            FLNGDL E VYM QPPGF+  N P  VCKL+KALYGLKQSPR WF KLS+ LL W F +S
Sbjct: 1106 FLNGDLVEQVYMAQPPGFLHPNHPNKVCKLKKALYGLKQSPRAWFTKLSSALLSWGFNSS 1165

Query: 1269 KSDKSMFVLNKDSVLVIILVYVDDILVTGNNLAFIQKFIKSLNELFALKDLGDLSYFLGI 1328
            ++D SMFV       +I+LVYVDDI+VTG++   IQ+ I  L+ LFAL+DLG LSYFLGI
Sbjct: 1166 RTDSSMFVHFGRHSTLIVLVYVDDIIVTGSSPVLIQQLIHKLHSLFALRDLGQLSYFLGI 1220

Query: 1329 EVRRDSNSLHLSQSKYFHDILQRAAMQDCKPIATPMASGMIMSINDGELLSDPKQYRSLV 1384
            EV  D  S+HLSQ KY  D+LQR +M D K +ATP   G+ +S  DG+L+ D   YRS+V
Sbjct: 1226 EVTYDGGSMHLSQRKYITDLLQRTSMLDSKAVATPGTVGLSLSQFDGDLMDDVTMYRSVV 1220

[Close]
BLAST of Lag0005240 vs. NCBI nr
Match: CAN73924.1 (hypothetical protein VITISV_041509 [Vitis vinifera])

HSP 1 Score: 958.7 bits (2477), Expect = 5.7e-275
Identity = 549/1308 (41.97%), Postives = 757/1308 (57.87%), Query Frame = 0 

Query: 131  TLPQPLAVKLNDNNFLLWKNQLLNAVLANGLHGFLDGSIPTPPKFLDTQQMQLNPDFLTW 190
            +L   L +KL+ +N++LWK Q+ N V ANG   +++G+   PPK L T    LNPDF+ W
Sbjct: 25   SLNHALPIKLDRSNYILWKTQMENVVYANGFEDYIEGTKSCPPKELPTG--DLNPDFVQW 84

Query: 191  ERYNRLIMCWMYSSLSEEKMGEIVSLETAFDIWNSLKRAYDSKTTARIMGLKTQLQKIKK 250
             R++R+++ WMYS+L+ + MG+IV  +T+ + W +L + + + + ARIM L+ + Q  KK
Sbjct: 85   RRFDRMVLSWMYSTLNPDIMGQIVGFQTSHEAWMALHKIFSASSKARIMQLRLEFQTTKK 144

Query: 251  EGLPVSQYLAQIKEVADKFAAIGEPISYRDHLAHILDSLGSEYNAFVTTIQNRTDNPALE 310
             G  +  Y+ ++K ++D  AA+GEP+  RDH+  +L  LG +YN+ V ++  R D+ +L 
Sbjct: 145  GGDAMLDYILKMKTISDNLAAVGEPVKERDHILQLLGGLGPDYNSIVASLTAREDDLSLH 204

Query: 311  DVRSLLLAYEARLEKQ-NVVEQLNVAQANLSTLHL-------QPVHL----RPSHQSRSS 370
             V S+LL +E RL  Q +     + A A+++++         QP H     RP HQ+ SS
Sbjct: 205  SVHSILLTHEQRLHLQHSSPTDPSFASAHMASVPSRQPNRPHQPRHYHHPSRPQHQASSS 264

Query: 371  STTSYRPP--FNPSPMPFSSPPVFSSSILGKPQSSPSQNRSPRNNSSKPQCQICGKFGHI 430
            S    RPP  F+P   P ++ P+            PS +  P + S++PQCQ+CGKFGH 
Sbjct: 265  SN---RPPTRFHPQ-QPRNNHPI------------PSAHNKPHHLSTRPQCQLCGKFGHT 324

Query: 431  ALICHHHTNLAYQTPPLQALLTTTQPAVPSPLLDSVSTFSTDSYHPDENWYLDSGATHHM 490
            A+ C+H  ++ YQ            P   +P   ++   + D  H D +W+ D+GATHH+
Sbjct: 325  AIKCYHRFDINYQG-------NNGVPLAQAPFSHAMLAAAPD--HQD-SWFFDTGATHHL 384

Query: 491  TPDASSLQTLMPYNGGEQVTVGNGKQIDISHVGTSFLSSFHKPVYLDAVLYTPAISKKLI 550
            +  A +L  + PY+G +QVT+G+G  + I + GT       K   L+ VL+ P +S  LI
Sbjct: 385  SHSAQTLSCVQPYSGTDQVTIGDGNSLPILNTGTKSFFFPSKTFSLNQVLHVPHLSTNLI 444

Query: 551  SVARLCKDNKAYVEFYSSFFLVKDIRSKQILLQGTLKDGLYRLSPAA-SNTSASTSSFSS 610
            SV++   DN  + E +SS F VKD  +K+ILL+G L+DGLY  S ++      +T SFS 
Sbjct: 445  SVSKFXTDNAVFFEXHSSCFFVKDQVTKKILLKGWLRDGLYEFSSSSPPRAFVTTGSFSD 504

Query: 611  ISNVVALLSTTSTAPNWHIRLGHPAASTLWQILSLCQISCS-SVNDF--CNSCQLAKSHR 670
                            WH RLGHPA   L + L+ C  S +  +N    C  C LAKSH 
Sbjct: 505  -------------GAIWHSRLGHPAVPILSKALASCNPSVTLQINKIAPCIICPLAKSHS 564

Query: 671  LPFSLSESMSTEPFQLIHSDVWGPSPHVSINGARYFLLFVDDFSRFTWLYLLKTKDEVFP 730
            LP+SLS S ++ P  LIH+D+WGP+P  SI GARYFL+F+DD+SR TW+Y L TKD+   
Sbjct: 565  LPYSLSSSHASHPLALIHTDLWGPAPSTSITGARYFLIFIDDYSRHTWIYFLSTKDQALQ 624

Query: 731  CFLHFKKYVEVQFNTRIKSMQTDWGGEFRRVSSFLSSNGIIHRVACPHTPQQNGRVERKN 790
             F+ F+K VE Q  T IK +Q+D GGEF     +L ++GI+H+ +CPHTPQQNGR ERK 
Sbjct: 625  SFITFRKMVENQLQTTIKCIQSDNGGEFLAFKPYLEAHGILHQFSCPHTPQQNGRAERKI 684

Query: 791  RHIVEIGLSLLAHSSLPLSFWSYAFQTAVYLINRLPTSVLHSQCPYQVLYDRLPDYSLLR 850
            RH+VE GL+L+A S LP  +W+YAFQTAVYLIN LP  +LH Q P Q L+ +LP+Y  LR
Sbjct: 685  RHLVETGLALMAQSFLPSKYWTYAFQTAVYLINLLPAKLLHFQSPTQTLFHKLPNYHHLR 744

Query: 851  SFGCACFPFLRPYNAHKLLFRSKECIFIGYSSNHKGYLCLDPSSGRLYVSRHVIFNENVF 910
             FGC CFP LRPY  HKL +RS  C+F+GY+  HKGYLCLD S+ R+Y+SR+VIF+E+ F
Sbjct: 745  VFGCLCFPSLRPYTQHKLCYRSTACVFLGYAPAHKGYLCLDVSTNRIYISRNVIFHESSF 804

Query: 911  PCSQRDFTFGSVKYPPPDQFFHSSALFLIFSSSPVAFPPSSPTPSMSLSHPPDFSSLSCT 970
            P                   F SS+            PPSSP+P +  S P         
Sbjct: 805  P-------------------FQSSS------------PPSSPSPHLPSSTP--------- 864

Query: 971  SVHHQSASKIDASAVSPFSSLSAPSIQSPVLSSPNPSATASAQLIQPNQSASLASSSPIC 1030
                                     I SP LS+P                +S A SSPI 
Sbjct: 865  -----------------------ALINSPSLSAP----------------SSPAVSSPII 924

Query: 1031 ASASDLYFLSADVPSQLP-PSDASPPSLPYHPPAPLSNLHPMITRAKAGITKPKCWLSTS 1090
             S S         P  +P P   S P+ P  PP PL N HPM+TRAK+GI K +     S
Sbjct: 925  TSDS--------XPPLIPVPFATSSPAAPSPPPLPL-NTHPMVTRAKSGIHKKR-----S 984

Query: 1091 PIPPSITEPSSFRMAVKQVEWCEAMEKEFAALVSNKTWTLVPPSNAYKVISCKW------ 1150
             I    TEP ++  A K   W +AM  E+ AL+ N TW+LVPP ++  ++ C+W      
Sbjct: 985  FIVQHTTEPRTYSQASKNDSWVQAMNSEYQALLRNNTWSLVPPPSSAHIVGCRWIYKLKY 1044

Query: 1151 -------------------------------PSIKPSTIRIVLSLAVRFNWAIKQLDVHN 1210
                                           P +KP TIR++L+LAV F W+++QLDV N
Sbjct: 1045 RPDGSIDRHKARLVAQGFTQTPGIDYFDTFSPVVKPCTIRLILALAVSFQWSVRQLDVEN 1104

Query: 1211 AFLNGDLHEDVYMYQPPGFVDKNRPEHVCKLQKALYGLKQSPREWFMKLSTCLLQWDFKA 1270
            AFLNGDL E+V+M QP GFV+   P +VCKL KALYGLKQ+PR WF KL   LL + F++
Sbjct: 1105 AFLNGDLEEEVFMTQPQGFVNPTYPTYVCKLHKALYGLKQAPRAWFQKLRIALLDYGFQS 1164

Query: 1271 SKSDKSMFVLNKDSVLVIILVYVDDILVTGNNLAFIQKFIKSLNELFALKDLGDLSYFLG 1330
            S++D S+F+ +  + ++I+LVYVDDILVTG+N   +  FI  L   FAL+DLG LSYFLG
Sbjct: 1165 SRADTSLFIFHTATDILILLVYVDDILVTGSNPMLVSHFISYLRTKFALRDLGPLSYFLG 1198

Query: 1331 IEVRRDSNSLHLSQSKYFHDILQRAAMQDCKPIATPMASGMIMSINDGELLSDPKQYRSL 1383
            I+ ++  + LHL+Q KY  D+L R  M+  KP  TP   G  +S +DG  LSDP +YR  
Sbjct: 1225 IQAQQLGSVLHLNQHKYIADLLNRTQMETSKPAPTPGRLGRTLSQSDGMSLSDPSEYRRT 1198

[Close]
BLAST of Lag0005240 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 797.0 bits (2057), Expect = 3.7e-229
Identity = 506/1319 (38.36%), Postives = 720/1319 (54.59%), Query Frame = 0 

Query: 139  KLNDNNFLLWKNQLLNAVLANGLHGFLDGSIPTPPKFLDTQQM-QLNPDFLTWERYNRLI 198
            KL   N+L+W  Q+        L GFLDGS   PP  + T    ++NPD+  W+R ++LI
Sbjct: 25   KLTSTNYLMWSRQVHALFDGYELAGFLDGSTTMPPATIGTDAAPRVNPDYTRWKRQDKLI 84

Query: 199  MCWMYSSLSEEKMGEIVSLETAFDIWNSLKRAYDSKTTARIMGLKTQLQKIKKEGLPVSQ 258
               +  ++S      +    TA  IW +L++ Y + +   +  L+TQL++  K    +  
Sbjct: 85   YSAVLGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGTKTIDD 144

Query: 259  YLAQIKEVADKFAAIGEPISYRDHLAHILDSLGSEYNAFVTTIQNRTDNPALEDVRSLLL 318
            Y+  +    D+ A +G+P+ + + +  +L++L  EY   +  I  +   P L ++   LL
Sbjct: 145  YMQGLVTRFDQLALLGKPMDHDEQVERVLENLPEEYKPVIDQIAAKDTPPTLTEIHERLL 204

Query: 319  AYEARLEKQNVVEQLNVAQANLSTLHLQPVHLRPSHQSRSSSTTSYRPPFNPSPMPFSSP 378
             +E+++        L V+ A +  +    V    SH  R+++TT+     N +    +  
Sbjct: 205  NHESKI--------LAVSSATVIPITANAV----SH--RNTTTTNNNNNGNRNNRYDNR- 264

Query: 379  PVFSSSILGKPQSSPSQNRSPRNNSSKP---QCQICGKFGHIALICHHHTNLAYQTPPLQ 438
               +++   KP    S N  P NN SKP   +CQICG  GH A  C        Q     
Sbjct: 265  ---NNNNNSKPWQQSSTNFHPNNNQSKPYLGKCQICGVQGHSAKRCS-------QLQHFL 324

Query: 439  ALLTTTQPAVPSPLLDSVSTFSTDSYHPDENWYLDSGATHHMTPDASSLQTLMPYNGGEQ 498
            + + + QP  P       +  +  S +   NW LDSGATHH+T D ++L    PY GG+ 
Sbjct: 325  SSVNSQQPPSPFTPWQPRANLALGSPYSSNNWLLDSGATHHITSDFNNLSLHQPYTGGDD 384

Query: 499  VTVGNGKQIDISHVGTSFLSSFHKPVYLDAVLYTPAISKKLISVARLCKDNKAYVEFYSS 558
            V V +G  I ISH G++ LS+  +P+ L  +LY P I K LISV RLC  N   VEF+ +
Sbjct: 385  VMVADGSTIPISHTGSTSLSTKSRPLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPA 444

Query: 559  FFLVKDIRSKQILLQGTLKDGLYRLSPAASNTSASTSSFSSISNVVALLSTTSTAPNWHI 618
             F VKD+ +   LLQG  KD LY   P AS+   S         + A  S+ +T  +WH 
Sbjct: 445  SFQVKDLNTGVPLLQGKTKDELYEW-PIASSQPVS---------LFASPSSKATHSSWHA 504

Query: 619  RLGHPAASTLWQILSLCQISCSSVND---FCNSCQLAKSHRLPFSLSESMSTEPFQLIHS 678
            RLGHPA S L  ++S   +S  + +     C+ C + KS+++PFS S   ST P + I+S
Sbjct: 505  RLGHPAPSILNSVISNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYS 564

Query: 679  DVWGPSPHVSINGARYFLLFVDDFSRFTWLYLLKTKDEVFPCFLHFKKYVEVQFNTRIKS 738
            DVW  SP +S +  RY+++FVD F+R+TWLY LK K +V   F+ FK  +E +F TRI +
Sbjct: 565  DVWS-SPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGT 624

Query: 739  MQTDWGGEFRRVSSFLSSNGIIHRVACPHTPQQNGRVERKNRHIVEIGLSLLAHSSLPLS 798
              +D GGEF  +  + S +GI H  + PHTP+ NG  ERK+RHIVE GL+LL+H+S+P +
Sbjct: 625  FYSDNGGEFVALWEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKT 684

Query: 799  FWSYAFQTAVYLINRLPTSVLHSQCPYQVLYDRLPDYSLLRSFGCACFPFLRPYNAHKLL 858
            +W YAF  AVYLINRLPT +L  + P+Q L+   P+Y  LR FGCAC+P+LRPYN HKL 
Sbjct: 685  YWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLD 744

Query: 859  FRSKECIFIGYSSNHKGYLCLDPSSGRLYVSRHVIFNENVFPCSQRDFTFGSVKYPPPDQ 918
             +S++C+F+GYS     YLCL   + RLY+SRHV F+EN FP S    T      P  +Q
Sbjct: 745  DKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFDENCFPFSNYLATLS----PVQEQ 804

Query: 919  FFHSSALFLIFSSSPVAFPPSSPTPSMSLSH----PPDFSSLSCTSVHHQ-SASKIDASA 978
               SS ++   ++ P    P  P PS S  H    PP  SS S    + Q S+S +D+S 
Sbjct: 805  RRESSCVWSPHTTLPTR-TPVLPAPSCSDPHHAATPP--SSPSAPFRNSQVSSSNLDSSF 864

Query: 979  VSPFSSLSAPSIQSPVLSSPNPSATASAQLIQPNQSASLASSSPICASASDLYFLSADVP 1038
             S F   S+P   +P  + P P+   +    Q + S + + ++P   S S L   S   P
Sbjct: 865  SSSFP--SSPEPTAPRQNGPQPTTQPTQTQTQTHSSQNTSQNNPTNESPSQL-AQSLSTP 924

Query: 1039 SQLPPSDAS-------------PPSLPYHPPAPLS-----------NLHPMITRAKAGIT 1098
            +Q   S  S             PPS+  HPP PL+           N H M TRAKAGI 
Sbjct: 925  AQSSSSSPSPTTSASSSSTSPTPPSILIHPPPPLAQIVNNNNQAPLNTHSMGTRAKAGII 984

Query: 1099 KPKCWLSTSPIPPSITEPSSFRMAVKQVEWCEAMEKEFAALVSNKTWTLVPPSNAY-KVI 1158
            KP    S +    + +EP +   A+K   W  AM  E  A + N TW LVPP  ++  ++
Sbjct: 985  KPNPKYSLAVSLAAESEPRTAIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIV 1044

Query: 1159 SCKW-------------------------------------PSIKPSTIRIVLSLAVRFN 1218
             C+W                                     P IK ++IRIVL +AV  +
Sbjct: 1045 GCRWIFTKKYNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRS 1104

Query: 1219 WAIKQLDVHNAFLNGDLHEDVYMYQPPGFVDKNRPEHVCKLQKALYGLKQSPREWFMKLS 1278
            W I+QLDV+NAFL G L +DVYM QPPGF+DK+RP +VCKL+KALYGLKQ+PR W+++L 
Sbjct: 1105 WPIRQLDVNNAFLQGTLTDDVYMSQPPGFIDKDRPNYVCKLRKALYGLKQAPRAWYVELR 1164

Query: 1279 TCLLQWDFKASKSDKSMFVLNKDSVLVIILVYVDDILVTGNNLAFIQKFIKSLNELFALK 1338
              LL   F  S SD S+FVL +   +V +LVYVDDIL+TGN+   +   + +L++ F++K
Sbjct: 1165 NYLLTIGFVNSVSDTSLFVLQRGKSIVYMLVYVDDILITGNDPTLLHNTLDNLSQRFSVK 1224

Query: 1339 DLGDLSYFLGIEVRRDSNSLHLSQSKYFHDILQRAAMQDCKPIATPMASGMIMSINDGEL 1384
            D  +L YFLGIE +R    LHLSQ +Y  D+L R  M   KP+ TPMA    +S+  G  
Sbjct: 1225 DHEELHYFLGIEAKRVPTGLHLSQRRYILDLLARTNMITAKPVTTPMAPSPKLSLYSGTK 1284

[Close]
BLAST of Lag0005240 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 761.9 bits (1966), Expect = 1.3e-218
Identity = 491/1317 (37.28%), Postives = 717/1317 (54.44%), Query Frame = 0 

Query: 139  KLNDNNFLLWKNQLLNAVLANGLHGFLDGSIPTPPKFLDTQQM-QLNPDFLTWERYNRLI 198
            KL   N+L+W  Q+        L GFLDGS P PP  + T  + ++NPD+  W R ++LI
Sbjct: 25   KLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATIGTDAVPRVNPDYTRWRRQDKLI 84

Query: 199  MCWMYSSLSEEKMGEIVSLETAFDIWNSLKRAYDSKTTARIMGLKTQLQKIKKEGLPVSQ 258
               +  ++S      +    TA  IW +L++ Y + +   +    TQL+ I +       
Sbjct: 85   YSAILGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHV----TQLRFITR------- 144

Query: 259  YLAQIKEVADKFAAIGEPISYRDHLAHILDSLGSEYNAFVTTIQNRTDNPALEDVRSLLL 318
                     D+ A +G+P+ + + +  +L++L  +Y   +  I  +   P+L ++   L+
Sbjct: 145  --------FDQLALLGKPMDHDEQVERVLENLPDDYKPVIDQIAAKDTPPSLTEIHERLI 204

Query: 319  AYEARLEKQNVVEQLNVAQANLSTLHLQPVHLRPSHQSRSSSTTSYRPPFNPSPMPFSSP 378
              E++L   N  E + +  AN+ T        R ++ +R+ +       +N +    +S 
Sbjct: 205  NRESKLLALNSAEVVPIT-ANVVT-------HRNTNTNRNQNNRGDNRNYNNNNNRSNSW 264

Query: 379  PVFSSSILGKPQSSPSQNRSPRNNSSKPQCQICGKFGHIALICHHHTNLAYQTPPLQALL 438
               SS        S S NR P+    +  CQIC   GH A  C        Q    Q+  
Sbjct: 265  QPSSS-------GSRSDNRQPKPYLGR--CQICSVQGHSAKRCP-------QLHQFQSTT 324

Query: 439  TTTQPAVPSPLLDSVSTFSTDSYHPDENWYLDSGATHHMTPDASSLQTLMPYNGGEQVTV 498
               Q   P       +  + +S +   NW LDSGATHH+T D ++L    PY GG+ V +
Sbjct: 325  NQQQSTSPFTPWQPRANLAVNSPYNANNWLLDSGATHHITSDFNNLSFHQPYTGGDDVMI 384

Query: 499  GNGKQIDISHVGTSFLSSFHKPVYLDAVLYTPAISKKLISVARLCKDNKAYVEFYSSFFL 558
             +G  I I+H G++ L +  + + L+ VLY P I K LISV RLC  N+  VEF+ + F 
Sbjct: 385  ADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNTNRVSVEFFPASFQ 444

Query: 559  VKDIRSKQILLQGTLKDGLYRLSPAASNTSASTSSFSSISNVVALLSTTSTAPNWHIRLG 618
            VKD+ +   LLQG  KD LY   P AS+ + S         + A   + +T  +WH RLG
Sbjct: 445  VKDLNTGVPLLQGKTKDELYEW-PIASSQAVS---------MFASPCSKATHSSWHSRLG 504

Query: 619  HPAASTLWQIL---SLCQISCSSVNDFCNSCQLAKSHRLPFSLSESMSTEPFQLIHSDVW 678
            HP+ + L  ++   SL  ++ S     C+ C + KSH++PFS S   S++P + I+SDVW
Sbjct: 505  HPSLAILNSVISNHSLPVLNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIYSDVW 564

Query: 679  GPSPHVSINGARYFLLFVDDFSRFTWLYLLKTKDEVFPCFLHFKKYVEVQFNTRIKSMQT 738
              SP +SI+  RY+++FVD F+R+TWLY LK K +V   F+ FK  VE +F TRI ++ +
Sbjct: 565  S-SPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIGTLYS 624

Query: 739  DWGGEFRRVSSFLSSNGIIHRVACPHTPQQNGRVERKNRHIVEIGLSLLAHSSLPLSFWS 798
            D GGEF  +  +LS +GI H  + PHTP+ NG  ERK+RHIVE+GL+LL+H+S+P ++W 
Sbjct: 625  DNGGEFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPKTYWP 684

Query: 799  YAFQTAVYLINRLPTSVLHSQCPYQVLYDRLPDYSLLRSFGCACFPFLRPYNAHKLLFRS 858
            YAF  AVYLINRLPT +L  Q P+Q L+ + P+Y  L+ FGCAC+P+LRPYN HKL  +S
Sbjct: 685  YAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRHKLEDKS 744

Query: 859  KECIFIGYSSNHKGYLCLDPSSGRLYVSRHVIFNENVFPCSQRDFTFGSVKYPPPDQFFH 918
            K+C F+GYS     YLCL   +GRLY SRHV F+E  FP S  +F   + +    D   +
Sbjct: 745  KQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTSQEQRSDSAPN 804

Query: 919  SSALFLIFSSSPVAFP-PSSPTPSMSLS-HPPDFSSLSCTSVHHQSASKIDASAVSPFSS 978
              +      ++P+  P P    P +  S  PP   S  CT+    S+S + +S++S  SS
Sbjct: 805  WPS-HTTLPTTPLVLPAPPCLGPHLDTSPRPPSSPSPLCTT--QVSSSNLPSSSISSPSS 864

Query: 979  L--SAPS-----------------IQSPVLSSPNPSATASAQLIQPNQSASLASSSPICA 1038
               +APS                   SP+L++PNP++ +      PNQ++ L   SPI +
Sbjct: 865  SEPTAPSHNGPQPTAQPHQTQNSNSNSPILNNPNPNSPSPN---SPNQNSPL-PQSPISS 924

Query: 1039 SASDLYFLSADVPSQLPPSDASPPSLPYHPPAP---------LSNLHPMITRAKAGITKP 1098
                    S   P+    S  S P LP   PAP           N H M TRAK GI KP
Sbjct: 925  PHIPTPSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMATRAKDGIRKP 984

Query: 1099 KCWLSTSPIPPSITEPSSFRMAVKQVEWCEAMEKEFAALVSNKTWTLV-PPSNAYKVISC 1158
                S +    + +EP +   A+K   W +AM  E  A + N TW LV PP  +  ++ C
Sbjct: 985  NQKYSYATSLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGC 1044

Query: 1159 KW-------------------------------------PSIKPSTIRIVLSLAVRFNWA 1218
            +W                                     P IK ++IRIVL +AV  +W 
Sbjct: 1045 RWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWP 1104

Query: 1219 IKQLDVHNAFLNGDLHEDVYMYQPPGFVDKNRPEHVCKLQKALYGLKQSPREWFMKLSTC 1278
            I+QLDV+NAFL G L ++VYM QPPGFVDK+RP++VC+L+KA+YGLKQ+PR W+++L T 
Sbjct: 1105 IRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQAPRAWYVELRTY 1164

Query: 1279 LLQWDFKASKSDKSMFVLNKDSVLVIILVYVDDILVTGNNLAFIQKFIKSLNELFALKDL 1338
            LL   F  S SD S+FVL +   ++ +LVYVDDIL+TGN+   ++  + +L++ F++K+ 
Sbjct: 1165 LLTVGFVNSISDTSLFVLQRGRSIIYMLVYVDDILITGNDTVLLKHTLDALSQRFSVKEH 1224

Query: 1339 GDLSYFLGIEVRRDSNSLHLSQSKYFHDILQRAAMQDCKPIATPMASGMIMSINDGELLS 1384
             DL YFLGIE +R    LHLSQ +Y  D+L R  M   KP+ATPMA+   ++++ G  L 
Sbjct: 1225 EDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATSPKLTLHSGTKLP 1280

[Close]
BLAST of Lag0005240 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 8.4e-104
Identity = 361/1308 (27.60%), Postives = 546/1308 (41.74%), Query Frame = 0 

Query: 142  DNNFLLWKNQLLNAVLANGLHGFLDGSIPTPPKFLDTQQMQLNPDFLTWERYNRLIMCWM 201
            DN F  W+ ++ + ++  GLH  LD     P    DT + +       W   +      +
Sbjct: 14   DNGFSTWQRRMRDLLIQQGLHKVLDVDSKKP----DTMKAE------DWADLDERAASAI 73

Query: 202  YSSLSEEKMGEIVSLETAFDIWNSLKRAYDSKTTARIMGLKTQLQKI-KKEGLPVSQYLA 261
               LS++ +  I+  +TA  IW  L+  Y SKT    + LK QL  +   EG     +L 
Sbjct: 74   RLHLSDDVVNNIIDEDTARGIWTRLESLYMSKTLTNKLYLKKQLYALHMSEGTNFLSHLN 133

Query: 262  QIKEVADKFAAIGEPISYRDHLAHILDSLGSEYNAFVTTIQNRTDNPALEDVRSLLLAYE 321
                +  + A +G  I   D    +L+SL S Y+   TTI +      L+DV S LL  E
Sbjct: 134  VFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATTILHGKTTIELKDVTSALLLNE 193

Query: 322  ARLEKQNVVEQLNVAQANLSTLHLQPVHLRPSHQSRSSSTTSYRPPFNPSPMPFSSPPVF 381
               +K                         P +Q ++  T      +  S   +      
Sbjct: 194  KMRKK-------------------------PENQGQALITEGRGRSYQRSSNNYG----- 253

Query: 382  SSSILGKPQSSPSQNRSPRNNSSKPQCQICGKFGHIALICHHHTNLAYQTPPLQALLTTT 441
             S   GK     S+NRS    S    C  C + GH    C +      +T          
Sbjct: 254  RSGARGK-----SKNRS---KSRVRNCYNCNQPGHFKRDCPNPRKGKGET---SGQKNDD 313

Query: 442  QPAVPSPLLDSVSTFSTDSYH------PDENWYLDSGATHHMTPDASSLQTLMPYNGGEQ 501
              A      D+V  F  +         P+  W +D+ A+HH TP        +  + G  
Sbjct: 314  NTAAMVQNNDNVVLFINEEEECMHLSGPESEWVVDTAASHHATPVRDLFCRYVAGDFG-T 373

Query: 502  VTVGNGKQIDISHVGTSFL-SSFHKPVYLDAVLYTPAISKKLISVARLCKDNKAYVEFYS 561
            V +GN     I+ +G   + ++    + L  V + P +   LIS   L +D       Y 
Sbjct: 374  VKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMNLISGIALDRDG------YE 433

Query: 562  SFFLVKDIR---SKQILLQGTLKDGLYRLSPAASNTSASTSSFSSISNVVALLSTTSTAP 621
            S+F  +  R      ++ +G  +  LYR     +N        ++  + +++        
Sbjct: 434  SYFANQKWRLTKGSLVIAKGVARGTLYR-----TNAEICQGELNAAQDEISV-------D 493

Query: 622  NWHIRLGHPAASTLWQIL---SLCQISCSSVNDFCNSCQLAKSHRLPFSLSESMSTEPFQ 681
             WH R+GH +   L QIL   SL   +  +    C+ C   K HR+ F  S         
Sbjct: 494  LWHKRMGHMSEKGL-QILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERKLNILD 553

Query: 682  LIHSDVWGPSPHVSINGARYFLLFVDDFSRFTWLYLLKTKDEVFPCFLHFKKYVEVQFNT 741
            L++SDV GP    S+ G +YF+ F+DD SR  W+Y+LKTKD+VF  F  F   VE +   
Sbjct: 554  LVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVERETGR 613

Query: 742  RIKSMQTDWGGEF--RRVSSFLSSNGIIHRVACPHTPQQNGRVERKNRHIVEIGLSLLAH 801
            ++K +++D GGE+  R    + SS+GI H    P TPQ NG  ER NR IVE   S+L  
Sbjct: 614  KLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVRSMLRM 673

Query: 802  SSLPLSFWSYAFQTAVYLINRLPTSVLHSQCPYQVLYDRLPDYSLLRSFGCACFPFLRPY 861
            + LP SFW  A QTA YLINR P+  L  + P +V  ++   YS L+ FGC  F  +   
Sbjct: 674  AKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFAHVPKE 733

Query: 862  NAHKLLFRSKECIFIGYSSNHKGYLCLDPSSGRLYVSRHVIFNENVFPCSQRDFTFGSVK 921
               KL  +S  CIFIGY     GY   DP   ++  SR V+F E+               
Sbjct: 734  QRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRES--------------- 793

Query: 922  YPPPDQFFHSSALFLIFSSSPVAFPPSSPTPSMSLSHPPDFSSLSCTSVHHQSASKIDAS 981
                                              +    D S             K+   
Sbjct: 794  ---------------------------------EVRTAADMS------------EKVKNG 853

Query: 982  AVSPFSSLSAPSIQSPVLSSPNPSATASAQLIQPNQSASLASSSPICASASDLYFLSADV 1041
             +  F  ++ PS  +   S+ + +   S Q  QP                        +V
Sbjct: 854  IIPNF--VTIPSTSNNPTSAESTTDEVSEQGEQP-----------------------GEV 913

Query: 1042 PSQLPPSDASPPSLPYHPPAPLSNLHPMITRAKAGITKPKCWLSTSPIPPS-ITEPSSFR 1101
              Q    D     + +  P      H  + R++    + + + ST  +  S   EP S +
Sbjct: 914  IEQGEQLDEGVEEVEH--PTQGEEQHQPLRRSERPRVESRRYPSTEYVLISDDREPESLK 973

Query: 1102 MAVKQVE---WCEAMEKEFAALVSNKTWTLVPPSNAYKVISCKW---------------- 1161
              +   E     +AM++E  +L  N T+ LV      + + CKW                
Sbjct: 974  EVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRYK 1033

Query: 1162 ---------------------PSIKPSTIRIVLSLAVRFNWAIKQLDVHNAFLNGDLHED 1221
                                 P +K ++IR +LSLA   +  ++QLDV  AFL+GDL E+
Sbjct: 1034 ARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEE 1093

Query: 1222 VYMYQPPGFVDKNRPEHVCKLQKALYGLKQSPREWFMKLSTCLLQWDFKASKSDKSMFVL 1281
            +YM QP GF    +   VCKL K+LYGLKQ+PR+W+MK  + +    +  + SD  ++  
Sbjct: 1094 IYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYFK 1153

Query: 1282 N-KDSVLVIILVYVDDILVTGNNLAFIQKFIKSLNELFALKDLGDLSYFLGIEV--RRDS 1341
               ++  +I+L+YVDD+L+ G +   I K    L++ F +KDLG     LG+++   R S
Sbjct: 1154 RFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERTS 1161

Query: 1342 NSLHLSQSKYFHDILQRAAMQDCKPIATPMASGMIMS--------INDGELLSDPKQYRS 1381
              L LSQ KY   +L+R  M++ KP++TP+A  + +S           G +   P  Y S
Sbjct: 1214 RKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVP--YSS 1161

[Close]
BLAST of Lag0005240 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 287.3 bits (734), Expect = 9.6e-76
Identity = 320/1275 (25.10%), Postives = 541/1275 (42.43%), Query Frame = 0 

Query: 189  TWERYNRLIMCWMYSSLSEEKMGEIVSLETAFDIWNSLKRAYDSKTTARIMGLKTQLQKI 248
            +W++  R     +   LS+  +    S  TA  I  +L   Y+ K+ A  + L+ +L  +
Sbjct: 47   SWKKAERCAKSTIIEYLSDSFLNFATSDITARQILENLDAVYERKSLASQLALRKRLLSL 106

Query: 249  K-KEGLPVSQYLAQIKEVADKFAAIGEPISYRDHLAHILDSLGSEYNAFVTTIQNRT-DN 308
            K    + +  +     E+  +  A G  I   D ++H+L +L S Y+  +T I+  + +N
Sbjct: 107  KLSSEMSLLSHFHIFDELISELLAAGAKIEEMDKISHLLITLPSCYDGIITAIETLSEEN 166

Query: 309  PALEDVRSLLLAYEARLEKQNVVEQLNVAQANLSTLHLQPVHLRPSHQSRSSSTTSYRPP 368
              L  V++ LL  E +++  +      V  A         VH         ++  +Y+  
Sbjct: 167  LTLAFVKNRLLDQEIKIKNDHNDTSKKVMNA--------IVH---------NNNNTYK-- 226

Query: 369  FNPSPMPFSSPPVFSSSILGKPQSSPSQNRSPRNNSSKPQCQICGKFGHIALICHHHTNL 428
                            + L K + +  +     N+  K +C  CG+ GHI   C H+  +
Sbjct: 227  ----------------NNLFKNRVTKPKKIFKGNSKYKVKCHHCGREGHIKKDCFHYKRI 286

Query: 429  AYQTPPLQALLTTTQPAVPSPLLDSVSTFSTDSYHPDENWYLDSGATHHMTPDAS----S 488
                          Q A    +   V   +  S   +  + LDSGA+ H+  D S    S
Sbjct: 287  LNNKNKENE--KQVQTATSHGIAFMVKEVNNTSVMDNCGFVLDSGASDHLINDESLYTDS 346

Query: 489  LQTLMPYNGGEQVTVGNGKQIDISHVGTSFLSSFHKPVYLDAVLYTPAISKKLISVARLC 548
            ++ + P    +      G+ I  +  G   L + H+ + L+ VL+    +  L+SV RL 
Sbjct: 347  VEVVPPL---KIAVAKQGEFIYATKRGIVRLRNDHE-ITLEDVLFCKEAAGNLMSVKRL- 406

Query: 549  KDNKAYVEFYSSFFLVKDIRSKQILLQGTLKDGLYRLSPAASNTSASTSSFSSISNVVAL 608
            ++    +EF  S   +              K+GL  +  +    +    +F + S     
Sbjct: 407  QEAGMSIEFDKSGVTIS-------------KNGLMVVKNSGMLNNVPVINFQAYS---IN 466

Query: 609  LSTTSTAPNWHIRLGHPAASTLWQI-----------LSLCQISCSSVNDFCNSCQLAKSH 668
                +    WH R GH +   L +I           L+  ++SC    + C  C   K  
Sbjct: 467  AKHKNNFRLWHERFGHISDGKLLEIKRKNMFSDQSLLNNLELSC----EICEPCLNGKQA 526

Query: 669  RLPFSLSESMS--TEPFQLIHSDVWGPSPHVSINGARYFLLFVDDFSRFTWLYLLKTKDE 728
            RLPF   +  +    P  ++HSDV GP   V+++   YF++FVD F+ +   YL+K K +
Sbjct: 527  RLPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSD 586

Query: 729  VFPCFLHFKKYVEVQFNTRIKSMQTDWGGEF--RRVSSFLSSNGIIHRVACPHTPQQNGR 788
            VF  F  F    E  FN ++  +  D G E+    +  F    GI + +  PHTPQ NG 
Sbjct: 587  VFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGV 646

Query: 789  VERKNRHIVEIGLSLLAHSSLPLSFWSYAFQTAVYLINRLPTSVL--HSQCPYQVLYDRL 848
             ER  R I E   ++++ + L  SFW  A  TA YLINR+P+  L   S+ PY++ +++ 
Sbjct: 647  SERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKK 706

Query: 849  PDYSLLRSFGCACFPFLRPYNAHKLLFRSKECIFIGYSSNHKGYLCLDPSSGRLYVSRHV 908
            P    LR FG   +  ++     K   +S + IF+GY  N  G+   D  + +  V+R V
Sbjct: 707  PYLKHLRVFGATVYVHIKNKQG-KFDDKSFKSIFVGYEPN--GFKLWDAVNEKFIVARDV 766

Query: 909  IFNENVFPCSQRDFTFGSVKYPPPDQFFHSSALFLIFSSSPVAFPPSSPTPSMSLSHPPD 968
            + +E     + R   F +V       F   S       S    FP  S    +    P +
Sbjct: 767  VVDETNM-VNSRAVKFETV-------FLKDSK-----ESENKNFPNDS-RKIIQTEFPNE 826

Query: 969  FSSLSCTSVHHQSASKIDASAVSPFSSLSAPSIQSPVLSSPNPSATA-SAQLIQPNQSAS 1028
              S  C ++     SK   S    F + S   IQ+     PN S    + Q ++ ++ ++
Sbjct: 827  --SKECDNIQFLKDSK--ESENKNFPNDSRKIIQT---EFPNESKECDNIQFLKDSKESN 886

Query: 1029 LASSSPICASASDLYF---LSADVPSQLPPSDASPPSLPYHPPAPLSNLHPMITRAKAGI 1088
                +       D +      +  P++   S+ +          P  N    I   ++  
Sbjct: 887  KYFLNESKKRKRDDHLNESKGSGNPNESRESETAEHLKEIGIDNPTKNDGIEIINRRSER 946

Query: 1089 TKPKCWLSTSPIPPSITE------------PSSF---RMAVKQVEWCEAMEKEFAALVSN 1148
             K K  +S +    S+ +            P+SF   +    +  W EA+  E  A   N
Sbjct: 947  LKTKPQISYNEEDNSLNKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKIN 1006

Query: 1149 KTWTLVPPSNAYKVISCKW-------------------------------------PSIK 1208
             TWT+        ++  +W                                     P  +
Sbjct: 1007 NTWTITKRPENKNIVDSRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVAR 1066

Query: 1209 PSTIRIVLSLAVRFNWAIKQLDVHNAFLNGDLHEDVYMYQPPGFVDKNRPEHVCKLQKAL 1268
             S+ R +LSL +++N  + Q+DV  AFLNG L E++YM  P G       ++VCKL KA+
Sbjct: 1067 ISSFRFILSLVIQYNLKVHQMDVKTAFLNGTLKEEIYMRLPQGI--SCNSDNVCKLNKAI 1126

Query: 1269 YGLKQSPREWFMKLSTCLLQWDFKASKSDKSMFVLNKDSV--LVIILVYVDDILVTGNNL 1328
            YGLKQ+ R WF      L + +F  S  D+ +++L+K ++   + +L+YVDD+++   ++
Sbjct: 1127 YGLKQAARCWFEVFEQALKECEFVNSSVDRCIYILDKGNINENIYVLLYVDDVVIATGDM 1186

Query: 1329 AFIQKFIKSLNELFALKDLGDLSYFLGIEVRRDSNSLHLSQSKYFHDILQRAAMQDCKPI 1381
              +  F + L E F + DL ++ +F+GI +    + ++LSQS Y   IL +  M++C  +
Sbjct: 1187 TRMNNFKRYLMEKFRMTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAV 1231

[Close]
BLAST of Lag0005240 vs. ExPASy Swiss-Prot
Match: P92519 (Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 GN=AtMg00810 PE=4 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 5.9e-33
Identity = 71/151 (47.02%), Postives = 102/151 (67.55%), Query Frame = 0 

Query: 1233 ILVYVDDILVTGNNLAFIQKFIKSLNELFALKDLGDLSYFLGIEVRRDSNSLHLSQSKYF 1292
            +L+YVDDIL+TG++   +   I  L+  F++KDLG + YFLGI+++   + L LSQ+KY 
Sbjct: 3    LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 1293 HDILQRAAMQDCKPIATPMASGMIMSINDGELLSDPKQYRSLVGALQYCTLTRPDLSFVV 1352
              IL  A M DCKP++TP+   +  S++  +   DP  +RS+VGALQY TLTRPD+S+ V
Sbjct: 63   EQILNNAGMLDCKPMSTPLPLKLNSSVSTAK-YPDPSDFRSIVGALQYLTLTRPDISYAV 122

Query: 1353 NKVCQFLHAPTSVHWLAVKRILRYLKATHHH 1384
            N VCQ +H PT   +  +KR+LRY+K T  H
Sbjct: 123  NIVCQRMHEPTLADFDLLKRVLRYVKGTIFH 152

[Close]
BLAST of Lag0005240 vs. ExPASy TrEMBL
Match: A0A438FWJ3 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_333 PE=4 SV=1)

HSP 1 Score: 994.2 bits (2569), Expect = 5.9e-286
Identity = 562/1292 (43.50%), Postives = 768/1292 (59.44%), Query Frame = 0 

Query: 132  LPQPLAVKLNDNNFLLWKNQLLNAVLANGLHGFLDGSIPTPPKFLDTQQMQLNPDFLTWE 191
            L   L +KL+ NN++LW+ Q+ N V ANG    ++G    PP+   T   + NPDF+ W 
Sbjct: 28   LNHALPIKLDRNNYILWRTQMENVVFANGFEDHIEGLKICPPQ--KTSSGETNPDFVMWR 87

Query: 192  RYNRLIMCWMYSSLSEEKMGEIVSLETAFDIWNSLKRAYDSKTTARIMGLKTQLQKIKKE 251
            R++R+I+ W+YSSL+ E MG+IV  +++   W +L+R + + + AR+M L+ + Q  +K 
Sbjct: 88   RFDRMILSWIYSSLTPEIMGQIVGYQSSHAAWFALERIFSASSRARVMQLRLEFQTTRKG 147

Query: 252  GLPVSQYLAQIKEVADKFAAIGEPISYRDHLAHILDSLGSEYNAFVTTIQNRTDNPALED 311
             L + +Y+ ++K +AD  AAIGEP++ RD +  +L  LG++YN+ V ++  R D  +L  
Sbjct: 148  SLTMMEYILKLKSLADNLAAIGEPVTDRDQILQLLGGLGADYNSIVASLTAREDEMSLHS 207

Query: 312  VRSLLLAYEARLEKQNVVEQLNVAQANLSTLHLQPV-HLRPSHQSRSSSTTSYRPPFNPS 371
            V S+LL +E RL  QN V + NV  ANL+T   Q   + R S Q+R S   + R      
Sbjct: 208  VHSILLTHEQRLSFQNSVAEDNVISANLATPQYQHFNNKRSSGQNRQSGFNTRR------ 267

Query: 372  PMPFSSPPVFSSSILGKPQSSPSQNRSPRNNSSKPQCQICGKFGHIALICHHHTNLAYQ- 431
                        +  G+ QSS            +PQCQ+CGKFGH  + C+H  ++ +Q 
Sbjct: 268  -----------GTNGGRSQSS----------QHRPQCQLCGKFGHTVVRCYHRFDINFQG 327

Query: 432  TPPLQALLTTTQPAVPSPLLDSVSTFSTDSYHPDENWYLDSGATHHMTPDASSLQTLMPY 491
              P    + T +P   + +   +++ ST S   DE W+ D+GATHH++     L  + PY
Sbjct: 328  YNPNMDTVQTNKPNAKNQVQAMMASPSTIS---DEAWFFDTGATHHLSQSIDPLSDVQPY 387

Query: 492  NGGEQVTVGNGKQIDISHVGTSFLSSFHKPVYLDAVLYTPAISKKLISVARLCKDNKAYV 551
             G ++V VGNGK + I H GT+F  S  K   L  VL+ P I+  LISV++ C DN  + 
Sbjct: 388  MGNDKVIVGNGKHLRILHTGTTFFPSSSKTFQLRQVLHVPDIATNLISVSQFCADNNTFF 447

Query: 552  EFYSSFFLVKDIRSKQILLQGTLKDGLYRLSP--AASNTSASTSSFSSISNVVALLSTTS 611
            EF+  FF VKD  +K+ILLQG+L+ GLYR       S  +  +SS+   SN    LS T+
Sbjct: 448  EFHPRFFFVKDQVTKKILLQGSLEHGLYRFPARFVPSPAAFVSSSYDRSSN----LSLTT 507

Query: 612  TAPNWHIRLGHPAASTLWQILSLCQIS--CSSVNDFCNSCQLAKSHRLPFSLSESMSTEP 671
            T   WH RLGHPA + L  IL+ C IS  C   N+ C +CQ AKSH+LPF++S S ++ P
Sbjct: 508  TTTLWHSRLGHPANNILKHILTSCNISHQCHK-NNVCCACQFAKSHKLPFNVSVSRASHP 567

Query: 672  FQLIHSDVWGPSPHVSINGARYFLLFVDDFSRFTWLYLLKTKDEVFPCFLHFKKYVEVQF 731
              L+H+D+WGP+   S  GARYF+LFVDDFSRF+W+Y L +KD+    F+ FK  VE QF
Sbjct: 568  LALLHADLWGPASIPSTTGARYFILFVDDFSRFSWIYPLHSKDQALSVFIKFKSLVENQF 627

Query: 732  NTRIKSMQTDWGGEFRRVSSFLSSNGIIHRVACPHTPQQNGRVERKNRHIVEIGLSLLAH 791
            N+RI+ +++D GGEF+  SS+L+++GI  + +CP+TP+QNGR ERK RHI+E GL+LLA 
Sbjct: 628  NSRIQCLRSDNGGEFKAFSSYLATHGIKSQFSCPYTPEQNGRAERKLRHIIETGLALLAT 687

Query: 792  SSLPLSFWSYAFQTAVYLINRLPTSVLHSQCPYQVLYDRLPDYSLLRSFGCACFPFLRPY 851
            +SLP  FW YAF TA++LINRLPT VL+ Q P+Q+L+ + P+Y + + FGC C+P++RPY
Sbjct: 688  ASLPFKFWLYAFHTAIFLINRLPTKVLNYQSPFQILFGKSPNYHIFKIFGCLCYPYIRPY 747

Query: 852  NAHKLLFRSKECIFIGYSSNHKGYLCLDPSSGRLYVSRHVIFNENVFPCSQRDFTFGSVK 911
            N +KL +RS +C+F+GYSSNHKGY+CL+P +GRLYV+RHV+F+E VFP            
Sbjct: 748  NKNKLSYRSSQCVFLGYSSNHKGYMCLNPLTGRLYVTRHVVFHETVFPFQS--------- 807

Query: 912  YPPPDQFFHSSALFLIFSSSPVAFPPSSPTPSMSLSHPPDFSSLSCTSVHHQSASKIDAS 971
               PDQ           SSS V      PTP+           L C+S            
Sbjct: 808  --TPDQ-----------SSSVVTI----PTPAF----------LPCSS-----------P 867

Query: 972  AVSPFSSLSAPSIQSPVLSSPNPSATASAQLIQPNQSASLASSSPICASASDLYFLSADV 1031
             VS   S + PS  SP L++  PS+T S   +     A +++S P               
Sbjct: 868  PVSSLRSHTTPSTSSPPLTN-MPSSTISLPDLIQVPFADISTSEP--------------- 927

Query: 1032 PSQLPPSDASPPSLPYHPPAPLSNLHPMITRAKAGITKPKCWLSTSPIPPSITEPSSFRM 1091
                            HP    +N HPM+TRAK GI+K K + S+      I+EP++F  
Sbjct: 928  ----------------HP----TNQHPMVTRAKNGISKKKVYFSS-----HISEPTTFTQ 987

Query: 1092 AVKQVEWCEAMEKEFAALVSNKTWTLVPPSNAYKVISCKW-------------------- 1151
            AVK   W  AMEKEF+AL  N TW LVPP +   +I CKW                    
Sbjct: 988  AVKDSNWVLAMEKEFSALQRNNTWHLVPPPSNGNIIGCKWVYKLKYKPDGTVDRYKARLV 1047

Query: 1152 -----------------PSIKPSTIRIVLSLAVRFNWAIKQLDVHNAFLNGDLHEDVYMY 1211
                             P +K STIRI+L++A+ FNW++ QLDV NAFL+GDL E V+M 
Sbjct: 1048 AQGFTQTLGLDYFETFSPVVKASTIRIILAVALSFNWSVHQLDVQNAFLHGDLEEHVFMQ 1107

Query: 1212 QPPGFVDKNRPEHVCKLQKALYGLKQSPREWFMKLSTCLLQWDFKASKSDKSMFVLNKDS 1271
            QPPGF++   P HVCKL KALYGLKQ+PR W+ KLST LL W F+AS++D SMF+ +   
Sbjct: 1108 QPPGFINSQYPSHVCKLNKALYGLKQAPRAWYNKLSTSLLGWGFQASRADSSMFIHHSTH 1167

Query: 1272 VLVIILVYVDDILVTGNNLAFIQKFIKSLNELFALKDLGDLSYFLGIEVRRDSNSLHLSQ 1331
             ++I+L+YVDDILVTG++ A +  FI  LN  FAL+DLG ++YFLGIEV R     HLSQ
Sbjct: 1168 DVLILLIYVDDILVTGSSSAQVSSFITRLNSSFALRDLGYVNYFLGIEVVRSGTMFHLSQ 1194

Query: 1332 SKYFHDILQRAAMQDCKPIATPMASGMIMSINDGELLSDPKQYRSLVGALQYCTLTRPDL 1381
             KY  D+L R AM D KP  TP   G  +S  DGE  SD   YRS VGALQY TLTRPD+
Sbjct: 1228 HKYTQDLLSRTAMLDSKPATTPGLLGQTLSHLDGEPFSDATLYRSTVGALQYLTLTRPDI 1194

[Close]
BLAST of Lag0005240 vs. ExPASy TrEMBL
Match: A0A438JAU4 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2773 PE=3 SV=1)

HSP 1 Score: 989.6 bits (2557), Expect = 1.5e-284
Identity = 560/1292 (43.34%), Postives = 766/1292 (59.29%), Query Frame = 0 

Query: 132  LPQPLAVKLNDNNFLLWKNQLLNAVLANGLHGFLDGSIPTPPKFLDTQQMQLNPDFLTWE 191
            L   L +KL+ NN++LW+ Q+ N V ANG    ++G    PP+   T   + NPDF+ W 
Sbjct: 135  LNHALPIKLDRNNYILWRTQMENVVFANGFEDHIEGLKICPPQ--KTSSGETNPDFVMWR 194

Query: 192  RYNRLIMCWMYSSLSEEKMGEIVSLETAFDIWNSLKRAYDSKTTARIMGLKTQLQKIKKE 251
            R++R+I+ W+YSSL+ E MG+IV  +++   W +L+R + + + AR+M L+ + Q  +K 
Sbjct: 195  RFDRMILSWIYSSLTPEIMGQIVGYQSSHAAWFALERIFSASSRARVMQLRLEFQTTRKG 254

Query: 252  GLPVSQYLAQIKEVADKFAAIGEPISYRDHLAHILDSLGSEYNAFVTTIQNRTDNPALED 311
             L + +Y+ ++K +AD  AAIGEP++ RD +  +L  LG++YN+ V ++  R D  +L  
Sbjct: 255  SLTMMEYILKLKSLADNLAAIGEPVTDRDQILQLLGGLGADYNSIVASLTAREDEMSLHS 314

Query: 312  VRSLLLAYEARLEKQNVVEQLNVAQANLSTLHLQPV-HLRPSHQSRSSSTTSYRPPFNPS 371
            V S+LL +E RL  QN V + NV  ANL+T   Q   + R S Q+R S   + R      
Sbjct: 315  VHSILLTHEQRLSFQNSVAEDNVISANLATPQYQHFNNKRSSGQNRQSGFNTRR------ 374

Query: 372  PMPFSSPPVFSSSILGKPQSSPSQNRSPRNNSSKPQCQICGKFGHIALICHHHTNLAYQ- 431
                        +  G+ QSS            +PQCQ+CGKFGH  + C+H  ++ +Q 
Sbjct: 375  -----------GTNGGRSQSS----------QHRPQCQLCGKFGHTVVRCYHRFDINFQG 434

Query: 432  TPPLQALLTTTQPAVPSPLLDSVSTFSTDSYHPDENWYLDSGATHHMTPDASSLQTLMPY 491
              P    + T +P   + +   +++ ST S   DE W+ D+GATHH++     L  + PY
Sbjct: 435  YNPNMDTVQTNKPNAKNQVQAMMASPSTIS---DEAWFFDTGATHHLSQSIDPLSDVQPY 494

Query: 492  NGGEQVTVGNGKQIDISHVGTSFLSSFHKPVYLDAVLYTPAISKKLISVARLCKDNKAYV 551
             G ++V VGNGK + I H GT+F  S  K   L  VL+ P I+  LISV++ C DN  + 
Sbjct: 495  MGNDKVIVGNGKHLRILHTGTTFFPSSSKTFQLRQVLHVPDIATNLISVSQFCADNNTFF 554

Query: 552  EFYSSFFLVKDIRSKQILLQGTLKDGLYRLSP--AASNTSASTSSFSSISNVVALLSTTS 611
            EF+  FF VKD  +K+ILLQG+L+ GLYR       S  +  +SS+   SN    LS T+
Sbjct: 555  EFHPRFFFVKDQVTKKILLQGSLEHGLYRFPARFVPSPAAFVSSSYDRSSN----LSLTT 614

Query: 612  TAPNWHIRLGHPAASTLWQILSLCQIS--CSSVNDFCNSCQLAKSHRLPFSLSESMSTEP 671
            T   WH RLGHPA + L  IL+ C IS  C   N+ C +CQ AKSH+LPF++S S ++ P
Sbjct: 615  TTTLWHSRLGHPADNILKHILTSCNISHQCHK-NNVCCACQFAKSHKLPFNVSVSRASHP 674

Query: 672  FQLIHSDVWGPSPHVSINGARYFLLFVDDFSRFTWLYLLKTKDEVFPCFLHFKKYVEVQF 731
              L+H+D+WGP+   S  GARYF+LFVDDFSRF+W+Y L +KD+    F+ FK  VE QF
Sbjct: 675  LALLHADLWGPASIPSTTGARYFILFVDDFSRFSWIYPLHSKDQALSVFIKFKSLVENQF 734

Query: 732  NTRIKSMQTDWGGEFRRVSSFLSSNGIIHRVACPHTPQQNGRVERKNRHIVEIGLSLLAH 791
            N+RI+ +++D GGEF+  SS+L+++GI  + +CP+TP+QNGR ERK RHI+E GL+LLA 
Sbjct: 735  NSRIQCLRSDNGGEFKAFSSYLATHGIKSQFSCPYTPEQNGRAERKLRHIIETGLALLAT 794

Query: 792  SSLPLSFWSYAFQTAVYLINRLPTSVLHSQCPYQVLYDRLPDYSLLRSFGCACFPFLRPY 851
            +SLP  FW YAF T ++LINRLPT VL+ Q P+Q+L+ + P+Y + + FGC C+P++RPY
Sbjct: 795  ASLPFKFWLYAFHTTIFLINRLPTKVLNYQSPFQILFGKSPNYHIFKIFGCLCYPYIRPY 854

Query: 852  NAHKLLFRSKECIFIGYSSNHKGYLCLDPSSGRLYVSRHVIFNENVFPCSQRDFTFGSVK 911
            N +KL +RS +C+F+GYSSNHKGY+CL+P +GRLYV+RHV+F+E VFP            
Sbjct: 855  NKNKLSYRSSQCVFLGYSSNHKGYMCLNPLTGRLYVTRHVVFHETVFPFQS--------- 914

Query: 912  YPPPDQFFHSSALFLIFSSSPVAFPPSSPTPSMSLSHPPDFSSLSCTSVHHQSASKIDAS 971
               PDQ           SSS V      PTP+           L C+S            
Sbjct: 915  --TPDQ-----------SSSVVTI----PTPAF----------LPCSS-----------P 974

Query: 972  AVSPFSSLSAPSIQSPVLSSPNPSATASAQLIQPNQSASLASSSPICASASDLYFLSADV 1031
             VS   S + PS  SP L++  PS+T S   +     A +++S P               
Sbjct: 975  PVSSLRSHTTPSTSSPPLTN-MPSSTISLPDLIQVPFADISTSEP--------------- 1034

Query: 1032 PSQLPPSDASPPSLPYHPPAPLSNLHPMITRAKAGITKPKCWLSTSPIPPSITEPSSFRM 1091
                            HP    +N HPM+TRAK GI+K K + S+      I+EP++F  
Sbjct: 1035 ----------------HP----TNQHPMVTRAKNGISKKKVYFSS-----HISEPTTFTQ 1094

Query: 1092 AVKQVEWCEAMEKEFAALVSNKTWTLVPPSNAYKVISCKW-------------------- 1151
            AVK   W  AMEKEF+AL  N TW LVPP +   +I CKW                    
Sbjct: 1095 AVKDSNWVLAMEKEFSALQRNNTWHLVPPPSNGNIIGCKWVYKLKYKPDGTVDRYKARLV 1154

Query: 1152 -----------------PSIKPSTIRIVLSLAVRFNWAIKQLDVHNAFLNGDLHEDVYMY 1211
                             P +K STIRI+L++A+ FNW++ QLDV NAFL+GDL E V+M 
Sbjct: 1155 AQGFTQTLGLDYFETFSPVVKASTIRIILAVALSFNWSVHQLDVQNAFLHGDLEEHVFMQ 1214

Query: 1212 QPPGFVDKNRPEHVCKLQKALYGLKQSPREWFMKLSTCLLQWDFKASKSDKSMFVLNKDS 1271
            QPPGF++   P HVCKL KALYGLKQ+PR W+ KLST LL W F+AS++D SMF+ +   
Sbjct: 1215 QPPGFINSQYPSHVCKLNKALYGLKQAPRAWYNKLSTSLLGWGFQASRADSSMFIHHSTH 1274

Query: 1272 VLVIILVYVDDILVTGNNLAFIQKFIKSLNELFALKDLGDLSYFLGIEVRRDSNSLHLSQ 1331
             ++I+L+YVDDILVTG++ A +  FI  LN  FAL+DLG ++YFLGIEV       HLSQ
Sbjct: 1275 DVLILLIYVDDILVTGSSSAQVSSFITRLNYSFALRDLGYVNYFLGIEVVSSGTMFHLSQ 1301

Query: 1332 SKYFHDILQRAAMQDCKPIATPMASGMIMSINDGELLSDPKQYRSLVGALQYCTLTRPDL 1381
             KY  D+L R AM D KP  TP   G  +S  DGE  SD   YRS VGALQY TLTRPD+
Sbjct: 1335 HKYTQDLLSRTAMLDSKPATTPGLLGQTLSHLDGEPFSDATLYRSTVGALQYLTLTRPDI 1301

[Close]
BLAST of Lag0005240 vs. ExPASy TrEMBL
Match: A5BP50 (Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_004343 PE=4 SV=1)

HSP 1 Score: 963.8 bits (2490), Expect = 8.5e-277
Identity = 550/1308 (42.05%), Postives = 757/1308 (57.87%), Query Frame = 0 

Query: 131  TLPQPLAVKLNDNNFLLWKNQLLNAVLANGLHGFLDGSIPTPPKFLDTQQMQLNPDFLTW 190
            +L   L +KL+ +N++LWK Q+ N V ANG   +++G+   PPK L T    LNPDF+ W
Sbjct: 25   SLNHALPIKLDRSNYILWKTQMENVVYANGFEDYIEGTKSCPPKELPTG--DLNPDFVQW 84

Query: 191  ERYNRLIMCWMYSSLSEEKMGEIVSLETAFDIWNSLKRAYDSKTTARIMGLKTQLQKIKK 250
             R++R+++ WMYS+L+ + MG+IV  +T+ + W +L + + + + ARIM L+ + Q  KK
Sbjct: 85   RRFDRMVLSWMYSTLNPDIMGQIVGFQTSHEAWMALHKIFSASSKARIMQLRLEFQTTKK 144

Query: 251  EGLPVSQYLAQIKEVADKFAAIGEPISYRDHLAHILDSLGSEYNAFVTTIQNRTDNPALE 310
             G  +  Y+ ++K ++D  AA+GEP+  RDH+  +L  LG +YN+ V ++  R D+ +L 
Sbjct: 145  GGDAMLDYILKMKTISDNLAAVGEPVKERDHILQLLGGLGPDYNSIVASLTAREDDLSLH 204

Query: 311  DVRSLLLAYEARLEKQ-NVVEQLNVAQANLSTLHL-------QPVHL----RPSHQSRSS 370
             V S+LL +E RL  Q +     + A A++++          QP H     RP HQ+ SS
Sbjct: 205  SVHSILLTHEQRLHLQHSSPTDPSFASAHMASXPSRQPNRPHQPRHYHHPSRPQHQASSS 264

Query: 371  STTSYRPP--FNPSPMPFSSPPVFSSSILGKPQSSPSQNRSPRNNSSKPQCQICGKFGHI 430
            S    RPP  F+P   P ++ P+            PS +  P + S++PQCQ+CGKFGH 
Sbjct: 265  SN---RPPTRFHPQ-QPRNNHPI------------PSAHNKPHHLSTRPQCQLCGKFGHT 324

Query: 431  ALICHHHTNLAYQTPPLQALLTTTQPAVPSPLLDSVSTFSTDSYHPDENWYLDSGATHHM 490
            A+ C+H  ++ YQ            P   +P   ++   + D  H D +W+ D+GATHH+
Sbjct: 325  AIKCYHRFDINYQG-------NNGVPLAQAPFSHAMXAAAPD--HQD-SWFFDTGATHHL 384

Query: 491  TPDASSLQTLMPYNGGEQVTVGNGKQIDISHVGTSFLSSFHKPVYLDAVLYTPAISKKLI 550
            +  A +L  + PY+G +QVT+G+G  + I + GT       K   L+ VL+ P +S  LI
Sbjct: 385  SHSAQTLSCVQPYSGTDQVTIGDGNSLPILNTGTKSFFFPSKTFSLNQVLHVPHLSTNLI 444

Query: 551  SVARLCKDNKAYVEFYSSFFLVKDIRSKQILLQGTLKDGLYRLSPAA-SNTSASTSSFSS 610
            SV++ C DN  + EF+SS F VKD  +K+ILL+G L+DGLY  S ++      +T SFS 
Sbjct: 445  SVSKFCTDNAVFFEFHSSCFFVKDQVTKKILLKGWLRDGLYEFSSSSPPRAFVTTGSFSD 504

Query: 611  ISNVVALLSTTSTAPNWHIRLGHPAASTLWQILSLCQISCS-SVNDF--CNSCQLAKSHR 670
                            WH RLGHPA   L + L+ C  S +  +N    C  C LAKSH 
Sbjct: 505  -------------GAIWHSRLGHPAVPILSKALASCNPSVTLQINKIAPCIICPLAKSHS 564

Query: 671  LPFSLSESMSTEPFQLIHSDVWGPSPHVSINGARYFLLFVDDFSRFTWLYLLKTKDEVFP 730
            LP+SLS S ++ P  LIH+D+WGP+P  SI GARYFL+F+DD+SR TW+Y L TKD+   
Sbjct: 565  LPYSLSSSHASHPLALIHTDLWGPAPSTSITGARYFLIFIDDYSRHTWIYFLSTKDQALQ 624

Query: 731  CFLHFKKYVEVQFNTRIKSMQTDWGGEFRRVSSFLSSNGIIHRVACPHTPQQNGRVERKN 790
             F+ F+K VE Q  T IK +Q+D GGEF     +L ++GI+H+ +CPHTPQQNGR ERK 
Sbjct: 625  SFITFRKMVENQLQTTIKCIQSDNGGEFLAFKPYLEAHGILHQFSCPHTPQQNGRAERKI 684

Query: 791  RHIVEIGLSLLAHSSLPLSFWSYAFQTAVYLINRLPTSVLHSQCPYQVLYDRLPDYSLLR 850
            RH+VE GL+L+A S LP  +W+YAFQTAVYLIN LP  +LH Q P Q L+ +LP+Y  LR
Sbjct: 685  RHLVETGLALMAQSFLPSKYWTYAFQTAVYLINLLPAKLLHFQSPTQTLFHKLPNYHHLR 744

Query: 851  SFGCACFPFLRPYNAHKLLFRSKECIFIGYSSNHKGYLCLDPSSGRLYVSRHVIFNENVF 910
             FGC CFP LRPY  HKL +RS  C+F+GY+  HKGYLCLD S+ R+Y+SR+VIF+E+ F
Sbjct: 745  VFGCLCFPSLRPYTQHKLCYRSTACVFLGYAPAHKGYLCLDVSTNRIYISRNVIFHESSF 804

Query: 911  PCSQRDFTFGSVKYPPPDQFFHSSALFLIFSSSPVAFPPSSPTPSMSLSHPPDFSSLSCT 970
            P                   F SS+            PPSSP+P +  S P         
Sbjct: 805  P-------------------FQSSS------------PPSSPSPHLPSSTP--------- 864

Query: 971  SVHHQSASKIDASAVSPFSSLSAPSIQSPVLSSPNPSATASAQLIQPNQSASLASSSPIC 1030
                                     I SP LS+P                +S A SSPI 
Sbjct: 865  -----------------------ALINSPSLSAP----------------SSPAVSSPII 924

Query: 1031 ASASDLYFLSADVPSQLP-PSDASPPSLPYHPPAPLSNLHPMITRAKAGITKPKCWLSTS 1090
             S S         P  +P P   S P+ P  PP PL N HPM+TRAK+GI K +     S
Sbjct: 925  TSDS--------XPPLIPVPFATSSPAAPSPPPLPL-NTHPMVTRAKSGIHKKR-----S 984

Query: 1091 PIPPSITEPSSFRMAVKQVEWCEAMEKEFAALVSNKTWTLVPPSNAYKVISCKW------ 1150
             I    TEP ++  A K   W +AM  E+ AL+ N TW+LVPP ++  ++ C+W      
Sbjct: 985  FIVQHTTEPRTYSQAXKNDSWVQAMNSEYQALLRNNTWSLVPPPSSAHIVGCRWIYKLKY 1044

Query: 1151 -------------------------------PSIKPSTIRIVLSLAVRFNWAIKQLDVHN 1210
                                           P +KP TIR++L+LAV F W+++QLDV N
Sbjct: 1045 RPDGSIDRHKARLVAQGFTQTPGIDYFDTFSPVVKPCTIRLILALAVSFQWSVRQLDVEN 1104

Query: 1211 AFLNGDLHEDVYMYQPPGFVDKNRPEHVCKLQKALYGLKQSPREWFMKLSTCLLQWDFKA 1270
             FLNGDL E+V+M QP GFV+   P +VCKL KALYGLKQ+PR WF KL   LL + F++
Sbjct: 1105 GFLNGDLEEEVFMTQPQGFVNPTYPTYVCKLHKALYGLKQAPRAWFQKLRIALLDYGFQS 1164

Query: 1271 SKSDKSMFVLNKDSVLVIILVYVDDILVTGNNLAFIQKFIKSLNELFALKDLGDLSYFLG 1330
            S++D S+F+ +  + ++I+LVYVDDILVTG+N   +  FI  L   FAL+DLG LSYFLG
Sbjct: 1165 SRADTSLFIFHTATDILILLVYVDDILVTGSNPMLVSHFISYLRTKFALRDLGPLSYFLG 1198

Query: 1331 IEVRRDSNSLHLSQSKYFHDILQRAAMQDCKPIATPMASGMIMSINDGELLSDPKQYRSL 1383
            I+ ++  + LHL+Q KY  D+L R  M+  KP  TP   G  +S +DG  LSDP +YR  
Sbjct: 1225 IQAQQLGSVLHLNQHKYIADLLNRTQMETSKPAPTPGRLGRTLSQSDGMSLSDPSEYRRT 1198

[Close]
BLAST of Lag0005240 vs. ExPASy TrEMBL
Match: A0A438C4C7 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX=29760 GN=POLX_2768 PE=4 SV=1)

HSP 1 Score: 962.2 bits (2486), Expect = 2.5e-276
Identity = 552/1308 (42.20%), Postives = 759/1308 (58.03%), Query Frame = 0 

Query: 129  FPTLPQPLAVKLNDNNFLLWKNQLLNAVLANGLHGFLDGSIPTPPKFLDTQQMQLNPDFL 188
            +  L   L VKL+  N++LW++Q+ N + ANG   F+DG+   P K  + +  ++NP F+
Sbjct: 26   YQMLNYSLPVKLDRTNYILWRSQIDNVIFANGFEDFIDGTSVCPEK--ELRPGEINPAFV 85

Query: 189  TWERYNRLIMCWMYSSLSEEKMGEIVSLETAFDIWNSLKRAYDSKTTARIMGLKTQLQKI 248
             W R +R I+ W+YSSL+   M +I+   ++   WN+L++ + S + ARIM L+ + Q  
Sbjct: 86   AWRRQDRTILSWIYSSLTPGIMAQIIGHNSSHSAWNALEKIFSSCSRARIMQLRLEFQST 145

Query: 249  KKEGLPVSQYLAQIKEVADKFAAIGEPISYRDHLAHILDSLGSEYNAFVTTIQNRTDNPA 308
            KK  + +  Y+ ++K VAD  AAIGE +S +D + ++L  LGS+YNA VT I  R D  +
Sbjct: 146  KKGSMSMIDYIMKVKGVADSLAAIGESVSEQDQIMNLLGGLGSDYNAVVTAITIREDKIS 205

Query: 309  LEDVRSLLLAYEARLEKQNVVEQLNVAQANLSTLHLQPVHLRPSHQSRSSSTTSYRPPFN 368
            LE V S+LLA+E RLE+Q  +EQL    AN +           S  +       Y     
Sbjct: 206  LEAVHSMLLAFEQRLEQQGSIEQLPAMSANYA-----------SSSNNRGGGRKYNGGRG 265

Query: 369  PSPMPFSSPPVFSSSILGKPQSSPSQNRSPRNNSS--KPQCQICGKFGHIALICHHHTNL 428
            P+ M      + +S+  G+ +         +N+SS  +PQCQ+CGKFGH   +C+H  ++
Sbjct: 266  PNFM------MTNSNFRGRGRGGRYGQSGRQNSSSSERPQCQLCGKFGHTVQVCYHRFDI 325

Query: 429  AYQTPPLQALLTTTQPAVPSPLLDSVSTFSTDSYH-PDENWYLDSGATHHMTPDASSLQT 488
             +Q+         T     S   +S+      S +  D+NWYLDSGA+HH+T + ++L  
Sbjct: 326  TFQSTQ-----NNTTGVSNSGNSNSMPAMVASSNNLADDNWYLDSGASHHLTQNVANLTN 385

Query: 489  LMPYNGGEQVTVGNGKQIDISHVGTSFLSSFHKPVYLDAVLYTPAISKKLISVARLCKDN 548
              PY G ++VT+GNGK + IS+ G + L S      L  V + P IS  LISVA+ C DN
Sbjct: 386  ATPYTGADKVTIGNGKHLTISNTGFTRLFSNPHSFQLKKVFHVPFISANLISVAKFCSDN 445

Query: 549  KAYVEFYSSFFLVKDIRSKQILLQGTLKDGLYRLSPAASN--------TSASTSSFSSIS 608
             A +EF+S+ F VKD+ +K++L QG L++GLY+  P  SN        T+ ST   S+I 
Sbjct: 446  NALIEFHSNGFFVKDLHTKRVLAQGKLENGLYKF-PVISNKKTAYVGITNDSTFQCSTIG 505

Query: 609  NVVALLSTTSTAPNWHIRLGHPAASTLWQILSLCQISCSSVN-DFCNSCQLAKSHRLPFS 668
            N   L         WH RLGH A   + +I+  C +SC       C+SCQLAKSHRLP  
Sbjct: 506  NKREL---------WHHRLGHAATDIVTRIMHNCNVSCGKYKATVCSSCQLAKSHRLPTH 565

Query: 669  LSESMSTEPFQLIHSDVWGPSPHVSINGARYFLLFVDDFSRFTWLYLLKTKDEVFPCFLH 728
            LS   +++P +L+++D+WGP+   S +GA+YF+LFVDD+SR+TWLYLL++KD+  P F  
Sbjct: 566  LSSFHASKPLELVYTDIWGPASVTSTSGAKYFILFVDDYSRYTWLYLLQSKDQA-PIFKQ 625

Query: 729  FKKYVEVQFNTRIKSMQTDWGGEFRRVSSFLSSNGIIHRVACPHTPQQNGRVERKNRHIV 788
            FK  VE QF+ +IK +Q+D GGEFR   SFL  +GI+HR +CP+   QNGRVERK+RH+V
Sbjct: 626  FKLQVENQFDAKIKCLQSDNGGEFRSFMSFLQESGILHRFSCPYNSSQNGRVERKHRHVV 685

Query: 789  EIGLSLLAHSSLPLSFWSYAFQTAVYLINRLPTSVLHSQCPYQVLYDRLPDYSLLRSFGC 848
            E GL+LLAH+ LPL FWSYAFQTA +LINR+P+ VL +  PY  L+ R PDY  LR FGC
Sbjct: 686  ETGLALLAHAGLPLKFWSYAFQTATFLINRMPSKVLQNASPYFALFKRNPDYKFLRVFGC 745

Query: 849  ACFPFLRPYNAHKLLFRSKECIFIGYSSNHKGYLCLDPSSGRLYVSRHVIFNENVFPCSQ 908
             C+PF+RPYN HKL +RS +C+F+GYS +HKGYLCLD  +GR+YVS HV+F+E  FP +Q
Sbjct: 746  LCYPFIRPYNNHKLQYRSLKCVFLGYSLHHKGYLCLDNLTGRVYVSPHVVFDETQFPFAQ 805

Query: 909  RDFTFGSVKYPPPDQFFHSSALFLIFSSSPVAFPPSSPTPSMSLSHPPDFSSLSCTSVHH 968
                                    I SS        S  P++ +S  P  S+LS    +H
Sbjct: 806  N-----------------------ISSSPSKDASDESVIPAIIVSSNP--STLSFHGSNH 865

Query: 969  QSASKIDASAVS----PFSSLSAPSIQSPVLSSPNPSATASAQLIQPNQSASLASSSPIC 1028
              AS    SA++    P  + +  S++ PVL +   +  A  Q++ P             
Sbjct: 866  SMASPNLTSALTHPTPPTDTPTTRSLREPVLEA-EVTLPAQQQVVVP------------- 925

Query: 1029 ASASDLYFLSADVPSQLPPSDASPPSLPYHPPAPLSNLHPMITRAKAGITKPKCWLSTSP 1088
                                          PP        + TR+ +GITK K   + + 
Sbjct: 926  ------------------------------PPR-------VTTRSMSGITKRKHIFNLAA 985

Query: 1089 IPPSITEPSSFRMAVKQVEWCEAMEKEFAALVSNKTWTLVPPSNAYKVISCKW------- 1148
                I+EP++ + A+K   W EAM+ E AAL  N+TW LV P     +I CKW       
Sbjct: 986  F--KISEPTTLKQAIKDPNWAEAMQTEIAALHKNQTWDLVDPPKDVNIIGCKWVYKLKYK 1045

Query: 1149 ------------------------------PSIKPSTIRIVLSLAVRFNWAIKQLDVHNA 1208
                                          P +K +TIRIVL++A+ + W ++QLDV NA
Sbjct: 1046 PDGSVDRYKARLVARGFNQTFGLDYFETFSPVVKAATIRIVLTIALSYRWELRQLDVQNA 1105

Query: 1209 FLNGDLHEDVYMYQPPGFVDKNRPEHVCKLQKALYGLKQSPREWFMKLSTCLLQWDFKAS 1268
            FLNGDL E VYM QPPGF+  N P  VCKL+KALYGLKQSPR WF KLS+ LL W F +S
Sbjct: 1106 FLNGDLVEQVYMAQPPGFLHPNHPNKVCKLKKALYGLKQSPRAWFTKLSSALLSWGFNSS 1165

Query: 1269 KSDKSMFVLNKDSVLVIILVYVDDILVTGNNLAFIQKFIKSLNELFALKDLGDLSYFLGI 1328
            ++D SMFV       +I+LVYVDDI+VTG++   IQ+ I  L+ LFAL+DLG LSYFLGI
Sbjct: 1166 RTDSSMFVHFGRHSTLIVLVYVDDIIVTGSSPVLIQQLIHKLHSLFALRDLGQLSYFLGI 1220

Query: 1329 EVRRDSNSLHLSQSKYFHDILQRAAMQDCKPIATPMASGMIMSINDGELLSDPKQYRSLV 1384
            EV  D  S+HLSQ KY  D+LQR +M D K +ATP   G+ +S  DG+L+ D   YRS+V
Sbjct: 1226 EVTYDGGSMHLSQRKYITDLLQRTSMLDSKAVATPGTVGLSLSQFDGDLMDDVTMYRSVV 1220

[Close]
BLAST of Lag0005240 vs. ExPASy TrEMBL
Match: A5AYB0 (Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_041509 PE=4 SV=1)

HSP 1 Score: 958.7 bits (2477), Expect = 2.7e-275
Identity = 549/1308 (41.97%), Postives = 757/1308 (57.87%), Query Frame = 0 

Query: 131  TLPQPLAVKLNDNNFLLWKNQLLNAVLANGLHGFLDGSIPTPPKFLDTQQMQLNPDFLTW 190
            +L   L +KL+ +N++LWK Q+ N V ANG   +++G+   PPK L T    LNPDF+ W
Sbjct: 25   SLNHALPIKLDRSNYILWKTQMENVVYANGFEDYIEGTKSCPPKELPTG--DLNPDFVQW 84

Query: 191  ERYNRLIMCWMYSSLSEEKMGEIVSLETAFDIWNSLKRAYDSKTTARIMGLKTQLQKIKK 250
             R++R+++ WMYS+L+ + MG+IV  +T+ + W +L + + + + ARIM L+ + Q  KK
Sbjct: 85   RRFDRMVLSWMYSTLNPDIMGQIVGFQTSHEAWMALHKIFSASSKARIMQLRLEFQTTKK 144

Query: 251  EGLPVSQYLAQIKEVADKFAAIGEPISYRDHLAHILDSLGSEYNAFVTTIQNRTDNPALE 310
             G  +  Y+ ++K ++D  AA+GEP+  RDH+  +L  LG +YN+ V ++  R D+ +L 
Sbjct: 145  GGDAMLDYILKMKTISDNLAAVGEPVKERDHILQLLGGLGPDYNSIVASLTAREDDLSLH 204

Query: 311  DVRSLLLAYEARLEKQ-NVVEQLNVAQANLSTLHL-------QPVHL----RPSHQSRSS 370
             V S+LL +E RL  Q +     + A A+++++         QP H     RP HQ+ SS
Sbjct: 205  SVHSILLTHEQRLHLQHSSPTDPSFASAHMASVPSRQPNRPHQPRHYHHPSRPQHQASSS 264

Query: 371  STTSYRPP--FNPSPMPFSSPPVFSSSILGKPQSSPSQNRSPRNNSSKPQCQICGKFGHI 430
            S    RPP  F+P   P ++ P+            PS +  P + S++PQCQ+CGKFGH 
Sbjct: 265  SN---RPPTRFHPQ-QPRNNHPI------------PSAHNKPHHLSTRPQCQLCGKFGHT 324

Query: 431  ALICHHHTNLAYQTPPLQALLTTTQPAVPSPLLDSVSTFSTDSYHPDENWYLDSGATHHM 490
            A+ C+H  ++ YQ            P   +P   ++   + D  H D +W+ D+GATHH+
Sbjct: 325  AIKCYHRFDINYQG-------NNGVPLAQAPFSHAMLAAAPD--HQD-SWFFDTGATHHL 384

Query: 491  TPDASSLQTLMPYNGGEQVTVGNGKQIDISHVGTSFLSSFHKPVYLDAVLYTPAISKKLI 550
            +  A +L  + PY+G +QVT+G+G  + I + GT       K   L+ VL+ P +S  LI
Sbjct: 385  SHSAQTLSCVQPYSGTDQVTIGDGNSLPILNTGTKSFFFPSKTFSLNQVLHVPHLSTNLI 444

Query: 551  SVARLCKDNKAYVEFYSSFFLVKDIRSKQILLQGTLKDGLYRLSPAA-SNTSASTSSFSS 610
            SV++   DN  + E +SS F VKD  +K+ILL+G L+DGLY  S ++      +T SFS 
Sbjct: 445  SVSKFXTDNAVFFEXHSSCFFVKDQVTKKILLKGWLRDGLYEFSSSSPPRAFVTTGSFSD 504

Query: 611  ISNVVALLSTTSTAPNWHIRLGHPAASTLWQILSLCQISCS-SVNDF--CNSCQLAKSHR 670
                            WH RLGHPA   L + L+ C  S +  +N    C  C LAKSH 
Sbjct: 505  -------------GAIWHSRLGHPAVPILSKALASCNPSVTLQINKIAPCIICPLAKSHS 564

Query: 671  LPFSLSESMSTEPFQLIHSDVWGPSPHVSINGARYFLLFVDDFSRFTWLYLLKTKDEVFP 730
            LP+SLS S ++ P  LIH+D+WGP+P  SI GARYFL+F+DD+SR TW+Y L TKD+   
Sbjct: 565  LPYSLSSSHASHPLALIHTDLWGPAPSTSITGARYFLIFIDDYSRHTWIYFLSTKDQALQ 624

Query: 731  CFLHFKKYVEVQFNTRIKSMQTDWGGEFRRVSSFLSSNGIIHRVACPHTPQQNGRVERKN 790
             F+ F+K VE Q  T IK +Q+D GGEF     +L ++GI+H+ +CPHTPQQNGR ERK 
Sbjct: 625  SFITFRKMVENQLQTTIKCIQSDNGGEFLAFKPYLEAHGILHQFSCPHTPQQNGRAERKI 684

Query: 791  RHIVEIGLSLLAHSSLPLSFWSYAFQTAVYLINRLPTSVLHSQCPYQVLYDRLPDYSLLR 850
            RH+VE GL+L+A S LP  +W+YAFQTAVYLIN LP  +LH Q P Q L+ +LP+Y  LR
Sbjct: 685  RHLVETGLALMAQSFLPSKYWTYAFQTAVYLINLLPAKLLHFQSPTQTLFHKLPNYHHLR 744

Query: 851  SFGCACFPFLRPYNAHKLLFRSKECIFIGYSSNHKGYLCLDPSSGRLYVSRHVIFNENVF 910
             FGC CFP LRPY  HKL +RS  C+F+GY+  HKGYLCLD S+ R+Y+SR+VIF+E+ F
Sbjct: 745  VFGCLCFPSLRPYTQHKLCYRSTACVFLGYAPAHKGYLCLDVSTNRIYISRNVIFHESSF 804

Query: 911  PCSQRDFTFGSVKYPPPDQFFHSSALFLIFSSSPVAFPPSSPTPSMSLSHPPDFSSLSCT 970
            P                   F SS+            PPSSP+P +  S P         
Sbjct: 805  P-------------------FQSSS------------PPSSPSPHLPSSTP--------- 864

Query: 971  SVHHQSASKIDASAVSPFSSLSAPSIQSPVLSSPNPSATASAQLIQPNQSASLASSSPIC 1030
                                     I SP LS+P                +S A SSPI 
Sbjct: 865  -----------------------ALINSPSLSAP----------------SSPAVSSPII 924

Query: 1031 ASASDLYFLSADVPSQLP-PSDASPPSLPYHPPAPLSNLHPMITRAKAGITKPKCWLSTS 1090
             S S         P  +P P   S P+ P  PP PL N HPM+TRAK+GI K +     S
Sbjct: 925  TSDS--------XPPLIPVPFATSSPAAPSPPPLPL-NTHPMVTRAKSGIHKKR-----S 984

Query: 1091 PIPPSITEPSSFRMAVKQVEWCEAMEKEFAALVSNKTWTLVPPSNAYKVISCKW------ 1150
             I    TEP ++  A K   W +AM  E+ AL+ N TW+LVPP ++  ++ C+W      
Sbjct: 985  FIVQHTTEPRTYSQASKNDSWVQAMNSEYQALLRNNTWSLVPPPSSAHIVGCRWIYKLKY 1044

Query: 1151 -------------------------------PSIKPSTIRIVLSLAVRFNWAIKQLDVHN 1210
                                           P +KP TIR++L+LAV F W+++QLDV N
Sbjct: 1045 RPDGSIDRHKARLVAQGFTQTPGIDYFDTFSPVVKPCTIRLILALAVSFQWSVRQLDVEN 1104

Query: 1211 AFLNGDLHEDVYMYQPPGFVDKNRPEHVCKLQKALYGLKQSPREWFMKLSTCLLQWDFKA 1270
            AFLNGDL E+V+M QP GFV+   P +VCKL KALYGLKQ+PR WF KL   LL + F++
Sbjct: 1105 AFLNGDLEEEVFMTQPQGFVNPTYPTYVCKLHKALYGLKQAPRAWFQKLRIALLDYGFQS 1164

Query: 1271 SKSDKSMFVLNKDSVLVIILVYVDDILVTGNNLAFIQKFIKSLNELFALKDLGDLSYFLG 1330
            S++D S+F+ +  + ++I+LVYVDDILVTG+N   +  FI  L   FAL+DLG LSYFLG
Sbjct: 1165 SRADTSLFIFHTATDILILLVYVDDILVTGSNPMLVSHFISYLRTKFALRDLGPLSYFLG 1198

Query: 1331 IEVRRDSNSLHLSQSKYFHDILQRAAMQDCKPIATPMASGMIMSINDGELLSDPKQYRSL 1383
            I+ ++  + LHL+Q KY  D+L R  M+  KP  TP   G  +S +DG  LSDP +YR  
Sbjct: 1225 IQAQQLGSVLHLNQHKYIADLLNRTQMETSKPAPTPGRLGRTLSQSDGMSLSDPSEYRRT 1198

[Close]
BLAST of Lag0005240 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 232.3 bits (591), Expect = 2.6e-60
Identity = 125/345 (36.23%), Postives = 187/345 (54.20%), Query Frame = 0 

Query: 1079 EPSSFRMAVKQVEWCEAMEKEFAALVSNKTWTL--VPPSNAYKVISCKW----------- 1138
            EPS++  A + + WC AM+ E  A+ +  TW +  +PP+   K I CKW           
Sbjct: 85   EPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNK--KPIGCKWVYKIKYNSDGT 144

Query: 1139 --------------------------PSIKPSTIRIVLSLAVRFNWAIKQLDVHNAFLNG 1198
                                      P  K ++++++L+++  +N+ + QLD+ NAFLNG
Sbjct: 145  IERYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNG 204

Query: 1199 DLHEDVYMYQPPGFV----DKNRPEHVCKLQKALYGLKQSPREWFMKLSTCLLQWDFKAS 1258
            DL E++YM  PPG+     D   P  VC L+K++YGLKQ+ R+WF+K S  L+ + F  S
Sbjct: 205  DLDEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASRQWFLKFSVTLIGFGFVQS 264

Query: 1259 KSDKSMFVLNKDSVLVIILVYVDDILVTGNNLAFIQKFIKSLNELFALKDLGDLSYFLGI 1318
             SD + F+    ++ + +LVYVDDI++  NN A + +    L   F L+DLG L YFLG+
Sbjct: 265  HSDHTYFLKITATLFLCVLVYVDDIIICSNNDAAVDELKSQLKSCFKLRDLGPLKYFLGL 324

Query: 1319 EVRRDSNSLHLSQSKYFHDILQRAAMQDCKPIATPMASGMIMSINDGELLSDPKQYRSLV 1378
            E+ R +  +++ Q KY  D+L    +  CKP + PM   +  S + G    D K YR L+
Sbjct: 325  EIARSAAGINICQRKYALDLLDETGLLGCKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLI 384

Query: 1379 GALQYCTLTRPDLSFVVNKVCQFLHAPTSVHWLAVKRILRYLKAT 1381
            G L Y  +TR D+SF VNK+ QF  AP   H  AV +IL Y+K T
Sbjct: 385  GRLMYLQITRLDISFAVNKLSQFSEAPRLAHQQAVMKILHYIKGT 427

[Close]
BLAST of Lag0005240 vs. TAIR 10
Match: ATMG00810.1 (DNA/RNA polymerases superfamily protein )

HSP 1 Score: 145.2 bits (365), Expect = 4.2e-34
Identity = 71/151 (47.02%), Postives = 102/151 (67.55%), Query Frame = 0 

Query: 1233 ILVYVDDILVTGNNLAFIQKFIKSLNELFALKDLGDLSYFLGIEVRRDSNSLHLSQSKYF 1292
            +L+YVDDIL+TG++   +   I  L+  F++KDLG + YFLGI+++   + L LSQ+KY 
Sbjct: 3    LLLYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYA 62

Query: 1293 HDILQRAAMQDCKPIATPMASGMIMSINDGELLSDPKQYRSLVGALQYCTLTRPDLSFVV 1352
              IL  A M DCKP++TP+   +  S++  +   DP  +RS+VGALQY TLTRPD+S+ V
Sbjct: 63   EQILNNAGMLDCKPMSTPLPLKLNSSVSTAK-YPDPSDFRSIVGALQYLTLTRPDISYAV 122

Query: 1353 NKVCQFLHAPTSVHWLAVKRILRYLKATHHH 1384
            N VCQ +H PT   +  +KR+LRY+K T  H
Sbjct: 123  NIVCQRMHEPTLADFDLLKRVLRYVKGTIFH 152

[Close]
BLAST of Lag0005240 vs. TAIR 10
Match: AT1G21280.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 66.6 bits (161), Expect = 1.9e-10
Identity = 35/159 (22.01%), Postives = 80/159 (50.31%), Query Frame = 0 

Query: 110 TFSQTAPPNTYQNPFGPSPFPTLPQPLAVK---LNDNNFLLWKNQLLNAVLANGLHGFLD 169
           T    +P +   +P+   P    P   +++    +++N++ WK +  + +      GF+D
Sbjct: 4   TIKSVSPTSDPDSPYYLPPDIHHPSDFSIQKLSKDEDNYVAWKIRFRSFLRVTKKFGFID 63

Query: 170 GSIPTPPKFLDTQQMQLNPDFLTWERYNRLIMCWMYSSLSEEKMGEIVSLETAFDIWNSL 229
           G++P P  F        +P +  WE+ N ++M W+ +S++++ +  ++  ETA  +W  L
Sbjct: 64  GTLPKPDPF--------SPLYQPWEQCNAMVMYWLMNSMTDKLLESVMYAETAHKMWEDL 123

Query: 230 KRAYDSKTTARIMGLKTQLQKIKKEGLPVSQYLAQIKEV 266
           +R +      +I  L+ +L  +++ G  V +Y  ++ +V
Sbjct: 124 RRVFVPCVDLKIYQLRRRLATLRQGGDSVEEYFGKLSKV 154

[Close]
BLAST of Lag0005240 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 63.9 bits (154), Expect = 1.2e-09
Identity = 32/73 (43.84%), Postives = 41/73 (56.16%), Query Frame = 0 

Query: 1053 MITRAKAGITKPKCWLSTSPIPPSITEPSSFRMAVKQVEWCEAMEKEFAALVSNKTWTLV 1112
            M+TR+KAGI K     S +       EP S   A+K   WC+AM++E  AL  NKTW LV
Sbjct: 1    MLTRSKAGINKLNPKYSLTITTTIKKEPKSVIFALKDPGWCQAMQEELDALSRNKTWILV 60

Query: 1113 PPSNAYKVISCKW 1126
            PP     ++ CKW
Sbjct: 61   PPPVNQNILGCKW 73

The following BLAST results are available for this feature:
BLAST of Lag0005240 vs. NCBI nr
Match NameE-valueIdentityDescription
RVW64314.11.2e-28543.50Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera][more]
RVX06084.13.0e-28443.34Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera][more]
CAN79148.11.8e-27642.05hypothetical protein VITISV_004343 [Vitis vinifera][more]
RVW18104.15.1e-27642.20Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Vitis vinifera][more]
CAN73924.15.7e-27541.97hypothetical protein VITISV_041509 [Vitis vinifera][more]
BLAST of Lag0005240 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q94HW23.7e-22938.36Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Q9ZT941.3e-21837.28Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
P109788.4e-10427.60Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum... [more]
P041469.6e-7625.10Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3[more]
P925195.9e-3347.02Uncharacterized mitochondrial protein AtMg00810 OS=Arabidopsis thaliana OX=3702 ... [more]
BLAST of Lag0005240 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A438FWJ35.9e-28643.50Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... [more]
A0A438JAU41.5e-28443.34Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... [more]
A5BP508.5e-27742.05Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITI... [more]
A0A438C4C72.5e-27642.20Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Vitis vinifera OX... [more]
A5AYB02.7e-27541.97Integrase catalytic domain-containing protein OS=Vitis vinifera OX=29760 GN=VITI... [more]
BLAST of Lag0005240 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G23160.12.6e-6036.23cysteine-rich RLK (RECEPTOR-like protein kinase) 8 [more]
ATMG00810.14.2e-3447.02DNA/RNA polymerases superfamily protein [more]
AT1G21280.11.9e-1022.01CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Ha... [more]
ATMG00820.11.2e-0943.84Reverse transcriptase (RNA-dependent DNA polymerase) [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025724GAG-pre-integrase domainPFAMPF13976gag_pre-integrscoord: 575..650
e-value: 5.2E-8
score: 32.6
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 663..762
e-value: 4.0E-8
score: 33.5
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 661..825
score: 21.88764
IPR029472Retrotransposon Copia-like, N-terminalPFAMPF14244Retrotran_gag_3coord: 137..173
e-value: 1.9E-5
score: 24.4
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 657..833
e-value: 5.0E-36
score: 125.8
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 190..325
e-value: 7.0E-24
score: 84.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..46
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..80
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 346..405
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 65..80
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 346..365
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 377..405
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 1124..1385
coord: 465..895
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1124..1311
e-value: 3.7E-54
score: 183.9
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 662..819
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 1088..1381

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0005240.1Lag0005240.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0015074 DNA integration
molecular_function GO:0003676 nucleic acid binding