Lag0005112 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTATCTCCAGATTCATTGGGGACTTTCTACAAACACTTGGTGGGCGACCACCACGGGCGGCGGAATCCGAGGGCGGTCCGAGGGCACACAGAGTGGTGTACGACGACGTGGTGGTGAGGGCGTTGATCACGGTGTTCGGGATGAGGGAAAACGGGAGGATCAAGAAGGAAAAGGCGAAGGGGGTGGTGGAGAGGCTGGGGCTGATAGAGAGCGAAGAAGAGAAGGAGAGATTCGAGCTGCCGGCGGAGGGCGGCGACGAGGTGGCGGTGGAGGAGGTGATGGGGGAGGAGGAGGAAGGGAAAAGAAACGAGCTGCTGTGGCAGGCTTTCAAGATATTTGATGTGGATGGAGATGGATTCATTGACAAATTGGAGTTGAAGAGAGTGCTTGAATGTTTGGGGTTGGATAAAGGGTGGGGGATTAGGGAGATTGAGAAAATGGTTAGTGTTGTGGATGTCAATTTGGATGGCAAAGTTGATTTTACTGAGTTTGAATTGATGATGGGTGTTAAATGTTCTTGA ATGGGTATCTCCAGATTCATTGGGGACTTTCTACAAACACTTGGTGGGCGACCACCACGGGCGGCGGAATCCGAGGGCGGTCCGAGGGCACACAGAGTGGTGTACGACGACGTGGTGGTGAGGGCGTTGATCACGGTGTTCGGGATGAGGGAAAACGGGAGGATCAAGAAGGAAAAGGCGAAGGGGGTGGTGGAGAGGCTGGGGCTGATAGAGAGCGAAGAAGAGAAGGAGAGATTCGAGCTGCCGGCGGAGGGCGGCGACGAGGTGGCGGTGGAGGAGGTGATGGGGGAGGAGGAGGAAGGGAAAAGAAACGAGCTGCTGTGGCAGGCTTTCAAGATATTTGATGTGGATGGAGATGGATTCATTGACAAATTGGAGTTGAAGAGAGTGCTTGAATGTTTGGGGTTGGATAAAGGGTGGGGGATTAGGGAGATTGAGAAAATGGTTAGTGTTGTGGATGTCAATTTGGATGGCAAAGTTGATTTTACTGAGTTTGAATTGATGATGGGTGTTAAATGTTCTTGA ATGGGTATCTCCAGATTCATTGGGGACTTTCTACAAACACTTGGTGGGCGACCACCACGGGCGGCGGAATCCGAGGGCGGTCCGAGGGCACACAGAGTGGTGTACGACGACGTGGTGGTGAGGGCGTTGATCACGGTGTTCGGGATGAGGGAAAACGGGAGGATCAAGAAGGAAAAGGCGAAGGGGGTGGTGGAGAGGCTGGGGCTGATAGAGAGCGAAGAAGAGAAGGAGAGATTCGAGCTGCCGGCGGAGGGCGGCGACGAGGTGGCGGTGGAGGAGGTGATGGGGGAGGAGGAGGAAGGGAAAAGAAACGAGCTGCTGTGGCAGGCTTTCAAGATATTTGATGTGGATGGAGATGGATTCATTGACAAATTGGAGTTGAAGAGAGTGCTTGAATGTTTGGGGTTGGATAAAGGGTGGGGGATTAGGGAGATTGAGAAAATGGTTAGTGTTGTGGATGTCAATTTGGATGGCAAAGTTGATTTTACTGAGTTTGAATTGATGATGGGTGTTAAATGTTCTTGA MGISRFIGDFLQTLGGRPPRAAESEGGPRAHRVVYDDVVVRALITVFGMRENGRIKKEKAKGVVERLGLIESEEEKERFELPAEGGDEVAVEEVMGEEEEGKRNELLWQAFKIFDVDGDGFIDKLELKRVLECLGLDKGWGIREIEKMVSVVDVNLDGKVDFTEFELMMGVKCS Homology
BLAST of Lag0005112 vs. NCBI nr
Match: XP_022951438.1 (calmodulin-like protein 2 [Cucurbita moschata] >XP_023537761.1 calmodulin-like protein 2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 289.7 bits (740), Expect = 1.7e-74 Identity = 153/179 (85.47%), Postives = 165/179 (92.18%), Query Frame = 0
BLAST of Lag0005112 vs. NCBI nr
Match: KAG6585405.1 (putative calcium-binding protein CML27, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020321.1 putative calcium-binding protein CML27, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 287.3 bits (734), Expect = 8.6e-74 Identity = 152/179 (84.92%), Postives = 164/179 (91.62%), Query Frame = 0
BLAST of Lag0005112 vs. NCBI nr
Match: XP_023002517.1 (calmodulin-like protein 2 [Cucurbita maxima]) HSP 1 Score: 285.4 bits (729), Expect = 3.3e-73 Identity = 152/179 (84.92%), Postives = 164/179 (91.62%), Query Frame = 0
BLAST of Lag0005112 vs. NCBI nr
Match: XP_038886166.1 (calmodulin-like protein 2 [Benincasa hispida]) HSP 1 Score: 284.6 bits (727), Expect = 5.6e-73 Identity = 150/178 (84.27%), Postives = 162/178 (91.01%), Query Frame = 0
BLAST of Lag0005112 vs. NCBI nr
Match: XP_008445056.1 (PREDICTED: calmodulin-like protein 7 [Cucumis melo] >KAA0065018.1 calmodulin-like protein 7 [Cucumis melo var. makuwa]) HSP 1 Score: 271.2 bits (692), Expect = 6.4e-69 Identity = 145/177 (81.92%), Postives = 159/177 (89.83%), Query Frame = 0
BLAST of Lag0005112 vs. ExPASy Swiss-Prot
Match: Q9ZR02 (Calmodulin-like protein 6 OS=Arabidopsis thaliana OX=3702 GN=CML6 PE=2 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 2.2e-11 Identity = 48/143 (33.57%), Postives = 76/143 (53.15%), Query Frame = 0
BLAST of Lag0005112 vs. ExPASy Swiss-Prot
Match: Q84UL5 (Probable calcium-binding protein CML32 OS=Oryza sativa subsp. japonica OX=39947 GN=CML32 PE=2 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.8e-11 Identity = 37/74 (50.00%), Postives = 49/74 (66.22%), Query Frame = 0
BLAST of Lag0005112 vs. ExPASy Swiss-Prot
Match: Q9SVG9 (Calcium-binding protein CML42 OS=Arabidopsis thaliana OX=3702 GN=CML42 PE=1 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 8.2e-11 Identity = 34/63 (53.97%), Postives = 45/63 (71.43%), Query Frame = 0
BLAST of Lag0005112 vs. ExPASy Swiss-Prot
Match: Q0JC44 (Probable calcium-binding protein CML22 OS=Oryza sativa subsp. japonica OX=39947 GN=CML22 PE=3 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.4e-10 Identity = 50/173 (28.90%), Postives = 82/173 (47.40%), Query Frame = 0
BLAST of Lag0005112 vs. ExPASy Swiss-Prot
Match: Q9SU00 (Calmodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=CML2 PE=2 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 1.4e-10 Identity = 43/130 (33.08%), Postives = 75/130 (57.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|