Lag0005104 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACCGTCCAAAGAAGGTGAACAACGACTTTCACCTTCGAAAGAATGCGACCGGGAGGAAAGTGGTGTTGGAGGAAAGGAAGGGAGCGAAAGTGAGGCGAATGGATCTAGATTTGGGAACGTTCGCGTGGGTTAGGGACTGCCTTATGGCCATTTCGAAGGCAAAAAACCCAATGGGATTTTGGAGAAGAAGAAGGCTAGATGCTGCAGTAATTTTCTTTCAGGTGCTGAGGAATTCAAAAGGAAGATATGGCCTGATATCCATGGAACCCTTTCGTGGGTAGAAAACCTCGATCTTTATTCCAGAAGGATCTAACTCGAAGGGATGGGGAGCTTTGGAAGCGTCGATGACGGGTCTTCTTCCTCCCGTGAAGCCGACGAACCAGAAAAGAAATCAAGAAAGAAGGATCACGAGCAACATAGGTAGCAAGATCAACACCTCAAAATCGTTTGCAGAGGCAGTGAAGGAGGGCCCGAGTCGGATACTTGAAGAGGATTTGAAATATTCAGAAGACGTCAGCTTTGCCTTCGATTGCACGGAAGCGGTGATTGTAGAGAGAACCTCCATTAACTCGAGTTGGGGAGATATCAAGGAAGCGTGCTTGAGGTTAGTTAACATTGGCCTATCTCTACAACCTTTCTGTGCTAACATGGCAGTGGGTCTATGTGGAAGCGATAAGGAAGCTAAAGATTTGATTCGGATGGGCTCTGCTGTGAAACCTGATTTTTTCTCAGTCCACGAGTGGGATTTTAAGGTGATAGCTGAAAGAAAATGCCAAAATTTCAACGGTGGATGGATTACGACCCTGGATGTCCCACCATTTTTTAGAACCAAACAGATGATTTCCAATCTTGCAGGCATGTGCGGGGGATTGGAGGAAGAAGAAAGATTTTCGGTGAGAATTGCTGAACCGATGAAATATGCTTCAAAGTCAAGAGGAATGATAGCGGTTTCATTCCCACGTCGTGCTACGTTAATCACGAGAAGACGTACTTTCCGGTGA ATGAACCGTCCAAAGAAGGTGAACAACGACTTTCACCTTCGAAAGAATGCGACCGGGAGGAAAGTGGTGTTGGAGGAAAGGAAGGGAGCGAAAGTGAGGCGAATGGATCTAGATTTGGGAACGTTCGCGTGGGTTAGGGACTGCCTTATGGCCATTTCGAAGGCAAAAAACCCAATGGGATTTTGGAGAAGAAGAAGGCTAGATGCTGCAGTAATTTTCTTTCAGAAAACCTCGATCTTTATTCCAGAAGGATCTAACTCGAAGGGATGGGGAGCTTTGGAAGCGTCGATGACGGGTCTTCTTCCTCCCGTGAAGCCGACGAACCAGAAAAGAAATCAAGAAAGAAGGATCACGAGCAACATAGGTAGCAAGATCAACACCTCAAAATCGTTTGCAGAGGCAGTGAAGGAGGGCCCGAGTCGGATACTTGAAGAGGATTTGAAATATTCAGAAGACGTCAGCTTTGCCTTCGATTGCACGGAAGCGGTGATTGTAGAGAGAACCTCCATTAACTCGAGTTGGGGAGATATCAAGGAAGCGTGCTTGAGGTTAGTTAACATTGGCCTATCTCTACAACCTTTCTGTGCTAACATGGCAGTGGGTCTATGTGGAAGCGATAAGGAAGCTAAAGATTTGATTCGGATGGGCTCTGCTGTGAAACCTGATTTTTTCTCAGTCCACGAGTGGGATTTTAAGGTGATAGCTGAAAGAAAATGCCAAAATTTCAACGGTGGATGGATTACGACCCTGGATGTCCCACCATTTTTTAGAACCAAACAGATGATTTCCAATCTTGCAGGCATGTGCGGGGGATTGGAGGAAGAAGAAAGATTTTCGGTGAGAATTGCTGAACCGATGAAATATGCTTCAAAGTCAAGAGGAATGATAGCGGTTTCATTCCCACGTCGTGCTACGTTAATCACGAGAAGACGTACTTTCCGGTGA ATGAACCGTCCAAAGAAGGTGAACAACGACTTTCACCTTCGAAAGAATGCGACCGGGAGGAAAGTGGTGTTGGAGGAAAGGAAGGGAGCGAAAGTGAGGCGAATGGATCTAGATTTGGGAACGTTCGCGTGGGTTAGGGACTGCCTTATGGCCATTTCGAAGGCAAAAAACCCAATGGGATTTTGGAGAAGAAGAAGGCTAGATGCTGCAGTAATTTTCTTTCAGAAAACCTCGATCTTTATTCCAGAAGGATCTAACTCGAAGGGATGGGGAGCTTTGGAAGCGTCGATGACGGGTCTTCTTCCTCCCGTGAAGCCGACGAACCAGAAAAGAAATCAAGAAAGAAGGATCACGAGCAACATAGGTAGCAAGATCAACACCTCAAAATCGTTTGCAGAGGCAGTGAAGGAGGGCCCGAGTCGGATACTTGAAGAGGATTTGAAATATTCAGAAGACGTCAGCTTTGCCTTCGATTGCACGGAAGCGGTGATTGTAGAGAGAACCTCCATTAACTCGAGTTGGGGAGATATCAAGGAAGCGTGCTTGAGGTTAGTTAACATTGGCCTATCTCTACAACCTTTCTGTGCTAACATGGCAGTGGGTCTATGTGGAAGCGATAAGGAAGCTAAAGATTTGATTCGGATGGGCTCTGCTGTGAAACCTGATTTTTTCTCAGTCCACGAGTGGGATTTTAAGGTGATAGCTGAAAGAAAATGCCAAAATTTCAACGGTGGATGGATTACGACCCTGGATGTCCCACCATTTTTTAGAACCAAACAGATGATTTCCAATCTTGCAGGCATGTGCGGGGGATTGGAGGAAGAAGAAAGATTTTCGGTGAGAATTGCTGAACCGATGAAATATGCTTCAAAGTCAAGAGGAATGATAGCGGTTTCATTCCCACGTCGTGCTACGTTAATCACGAGAAGACGTACTTTCCGGTGA MNRPKKVNNDFHLRKNATGRKVVLEERKGAKVRRMDLDLGTFAWVRDCLMAISKAKNPMGFWRRRRLDAAVIFFQKTSIFIPEGSNSKGWGALEASMTGLLPPVKPTNQKRNQERRITSNIGSKINTSKSFAEAVKEGPSRILEEDLKYSEDVSFAFDCTEAVIVERTSINSSWGDIKEACLRLVNIGLSLQPFCANMAVGLCGSDKEAKDLIRMGSAVKPDFFSVHEWDFKVIAERKCQNFNGGWITTLDVPPFFRTKQMISNLAGMCGGLEEEERFSVRIAEPMKYASKSRGMIAVSFPRRATLITRRRTFR Homology
BLAST of Lag0005104 vs. NCBI nr
Match: TYK14183.1 (hypothetical protein E5676_scaffold8046G00070 [Cucumis melo var. makuwa]) HSP 1 Score: 129.4 bits (324), Expect = 5.4e-26 Identity = 83/236 (35.17%), Postives = 119/236 (50.42%), Query Frame = 0
BLAST of Lag0005104 vs. NCBI nr
Match: KAA0054521.1 (transcription elongation factor B polypeptide 3 isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 84.3 bits (207), Expect = 2.0e-12 Identity = 57/170 (33.53%), Postives = 82/170 (48.24%), Query Frame = 0
BLAST of Lag0005104 vs. NCBI nr
Match: KAE8646271.1 (hypothetical protein Csa_023831, partial [Cucumis sativus]) HSP 1 Score: 58.5 bits (140), Expect = 1.2e-04 Identity = 32/88 (36.36%), Postives = 46/88 (52.27%), Query Frame = 0
BLAST of Lag0005104 vs. NCBI nr
Match: KAE8648463.1 (hypothetical protein Csa_023678, partial [Cucumis sativus]) HSP 1 Score: 57.8 bits (138), Expect = 2.0e-04 Identity = 32/86 (37.21%), Postives = 44/86 (51.16%), Query Frame = 0
BLAST of Lag0005104 vs. ExPASy TrEMBL
Match: A0A5D3CQQ0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold8046G00070 PE=4 SV=1) HSP 1 Score: 129.4 bits (324), Expect = 2.6e-26 Identity = 83/236 (35.17%), Postives = 119/236 (50.42%), Query Frame = 0
BLAST of Lag0005104 vs. ExPASy TrEMBL
Match: A0A5A7ULV4 (Transcription elongation factor B polypeptide 3 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold24G003030 PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 9.6e-13 Identity = 57/170 (33.53%), Postives = 82/170 (48.24%), Query Frame = 0
BLAST of Lag0005104 vs. ExPASy TrEMBL
Match: A0A0A0LY03 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G673520 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 4.5e-10 Identity = 38/96 (39.58%), Postives = 50/96 (52.08%), Query Frame = 0
BLAST of Lag0005104 vs. ExPASy TrEMBL
Match: A0A0A0KGZ5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G169320 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 7.1e-08 Identity = 31/65 (47.69%), Postives = 46/65 (70.77%), Query Frame = 0
BLAST of Lag0005104 vs. ExPASy TrEMBL
Match: A0A0A0KB99 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G136570 PE=4 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 7.4e-05 Identity = 35/87 (40.23%), Postives = 42/87 (48.28%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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