Lag0004961 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGATGCAGAAGATTGTGTTATCTTGAGATAAGCATATCCAAATCTGAGAATGGTCCATTAATTATCAGCCCTGGTCTCTTCTCTCTTCCATTCCACGGGACGAGTACTAGCTATTCCTTGAATCAACGTGTTAGCAACTCCCATTGGCTTGAATCGATTCCTCTGAATGATGAATTAACTTCTTTGACTCTTAATGAAATTCGGGTTTTGCATTCGAAAAGAAAAACGCCAAGCCAAAACTAATGGACATATGATCTATTGAATGCAGGTTGTGAAGGGGCTCCATTGCTTCCACTGCTTTACGTGATTACAAATTTGTCCTTCAACATAACTTTGCTCAGCTTGGTGAAGAAATCTTCGGCAGTCGTTGCTTCTCTTGTTGTGATGCTTTCAGGTTCTTTTCTTCTCTGTAGAATATATGAACTAATATTGGATAATGTTATTTCATATGCATGAGCTAAAGATTGGTCTTGTTGCCATTTGCAGTGCCAATTTCAATTTATATTCTATCACTTCCATTGCCATATCTACCTGAAGGCGCAAGCTTAAGCCCCCTCTTTCTCACGGGGAGTTTAATGCTTGTGTTGGGTCTTGCTTTTTACTACATTCCTCAGCGTTCAAAGTAA ATGAGATGCAGAAGATTGTGTTATCTTGAGATAAGCATATCCAAATCTGAGAATGGTCCATTAATTATCAGCCCTGGTCTCTTCTCTCTTCCATTCCACGGGACGAGTTGTGAAGGGGCTCCATTGCTTCCACTGCTTTACGTGATTACAAATTTGTCCTTCAACATAACTTTGCTCAGCTTGGTGAAGAAATCTTCGGCAGTCGTTGCTTCTCTTGTTGTGATGCTTTCAGTGCCAATTTCAATTTATATTCTATCACTTCCATTGCCATATCTACCTGAAGGCGCAAGCTTAAGCCCCCTCTTTCTCACGGGGAGTTTAATGCTTGTGTTGGGTCTTGCTTTTTACTACATTCCTCAGCGTTCAAAGTAA ATGAGATGCAGAAGATTGTGTTATCTTGAGATAAGCATATCCAAATCTGAGAATGGTCCATTAATTATCAGCCCTGGTCTCTTCTCTCTTCCATTCCACGGGACGAGTTGTGAAGGGGCTCCATTGCTTCCACTGCTTTACGTGATTACAAATTTGTCCTTCAACATAACTTTGCTCAGCTTGGTGAAGAAATCTTCGGCAGTCGTTGCTTCTCTTGTTGTGATGCTTTCAGTGCCAATTTCAATTTATATTCTATCACTTCCATTGCCATATCTACCTGAAGGCGCAAGCTTAAGCCCCCTCTTTCTCACGGGGAGTTTAATGCTTGTGTTGGGTCTTGCTTTTTACTACATTCCTCAGCGTTCAAAGTAA MRCRRLCYLEISISKSENGPLIISPGLFSLPFHGTSCEGAPLLPLLYVITNLSFNITLLSLVKKSSAVVASLVVMLSVPISIYILSLPLPYLPEGASLSPLFLTGSLMLVLGLAFYYIPQRSK Homology
BLAST of Lag0004961 vs. NCBI nr
Match: KAG7020259.1 (Protein CLT2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 151.0 bits (380), Expect = 6.8e-33 Identity = 80/91 (87.91%), Postives = 86/91 (94.51%), Query Frame = 0
BLAST of Lag0004961 vs. NCBI nr
Match: XP_038885312.1 (protein CLT2, chloroplastic [Benincasa hispida]) HSP 1 Score: 149.1 bits (375), Expect = 2.6e-32 Identity = 81/86 (94.19%), Postives = 85/86 (98.84%), Query Frame = 0
BLAST of Lag0004961 vs. NCBI nr
Match: XP_022132091.1 (protein CLT2, chloroplastic-like [Momordica charantia]) HSP 1 Score: 149.1 bits (375), Expect = 2.6e-32 Identity = 81/87 (93.10%), Postives = 85/87 (97.70%), Query Frame = 0
BLAST of Lag0004961 vs. NCBI nr
Match: XP_023001859.1 (protein CLT2, chloroplastic [Cucurbita maxima]) HSP 1 Score: 147.5 bits (371), Expect = 7.5e-32 Identity = 79/87 (90.80%), Postives = 85/87 (97.70%), Query Frame = 0
BLAST of Lag0004961 vs. NCBI nr
Match: XP_023537000.1 (protein CLT2, chloroplastic-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 145.2 bits (365), Expect = 3.7e-31 Identity = 78/87 (89.66%), Postives = 84/87 (96.55%), Query Frame = 0
BLAST of Lag0004961 vs. ExPASy Swiss-Prot
Match: A1L4X0 (Protein CLT2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLT2 PE=2 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 3.6e-21 Identity = 54/85 (63.53%), Postives = 70/85 (82.35%), Query Frame = 0
BLAST of Lag0004961 vs. ExPASy Swiss-Prot
Match: Q058P6 (Protein CLT1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLT1 PE=2 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 8.6e-15 Identity = 42/82 (51.22%), Postives = 64/82 (78.05%), Query Frame = 0
BLAST of Lag0004961 vs. ExPASy Swiss-Prot
Match: Q8RWL5 (Protein CLT3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=CLT3 PE=2 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 1.2e-13 Identity = 41/80 (51.25%), Postives = 60/80 (75.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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