Lag0004723 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0004723
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
Description60S ribosomal protein L17
Locationchr6: 6409358 .. 6411128 (-)
RNA-Seq ExpressionLag0004723
SyntenyLag0004723
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTCGTCTTCTATCTTCTCGATTTATTCTTCGGAACAATGTCTTCTGAGTTTTAAGTTAGCGTTTGATCTTCAATTCCCCGTTTTTGTTCATTGTTGCAGGTGAAGTATTCGAGGGAACCAGACAATCCCACCAAGTGTATGTATTCTTTTTCTACACTTTTTCTGATGGATCTCGTTCGATTTCTGTTTGCATCTTTGCTTTCGTTTTGTTTAACTTCTATCGGGTTGAGTTTTCTGACTACAGTGATATTTTCGACTTGAACTGACGCCCTGTTTTTCTCTTTTCAGCCTGCAAAGCCAGAGGCTCGGACCTCAGAGTTCACTTTAAGGTAGGGTTTATTTCACTAATTTGAGTCTGCAATCCTTTAAATTGACAATCGAGTAGAAGTTCTATGAACTAGGGTTTGCACCCGTAGCGATTAGACTTTGCATTTTTGTCAAAGGAACTAAATTTTCTCGTTAGGAGTGATTCATGTTCTTGACGCACGTAGTGGTGTTTGGCATACAAATTTCTGTTTTGTTTGATTTATTGAGTTTCCTATGAACAGTTTTCTACCTCTATCCGATGCATAGAGTGTTTGATCCAAGAACGTATACCCTTTTTCGGTGCAAGTAATTGGTTGGTTTAAGTGATAATATTTTAGGTTGTTTGTTAATGATTACATCTTCTAAGCCTAGTTTCTCAAAACAATCGCAGTTGCTGTATAACAGCTTTCGCCTTTACCAGGCTTGAGAGCTAATGCTGGTCACACCCTTCTCTTATTATAGCTACTCACATTAACTATACATATGACTTTCCTTGATATTTCTGTGTAACCTGATGATAAAAGCAGGGCTCTGTTGCCTTCTGTGAACAGGGCTCTCGTAAACTTCAGGGAAATTATATGCATTGTTATTGGGTGAACCTCTGTAACCCATAGTGTCTGAAGGTTCAGTAAATGATGCTACATATTTTAGCCATATTTCAGTACCGTATGTTGTTATTTAGACTTGCAATAACACGTCTCTCTTTTATATTATAGAACACAAGGGAAACTGCCTTTGCCATTAGGAAGTTGCCACTGGCTAAGGCCAAGAGGTACTTAGAGGATGTACTTGCCCACAAACAGGCCATTCCATTCCGTCGCTTCTGTGGTGGTGTTGGACGAACTGCTCAGGCAAAGAACAGGCATTCCAATGGCCAAGGACGCTGGCCTGTCAAATCTGCAAAGTTTATTCTAGATTTGCTTAAGAATGCCGAGAGCAATGCTGAAGTATGTATTTCATTTTTGGTCTCACCCTTAATTGTTAAGTTTTTTCTTCCCTATTGCTCATGATTATATCTGTTCTTTCAGGTTAAGGGTCTGGATGTTGATTTGCTCCACGTATCTCACATCCAGGTAAACCAAGCTCAGAAACAAAGGCGTCGTACCTACCGTGCCCATGGAAGAATCAACCGTATGTTCTAACAACAGTTTACTTAATTTACTATGGATGTCTGTGCATCCAACATCCAGCCTGACCTTCCCTTCTCTTTCCTTTCCTTTCTGGTTGGCAGCTTACATGTCTTCTCCTTGCCATATTGAGCTGATCTTGTCTGAAAAGGAAGAGCCTGTTAAGAAGGAGGTATTAATCTGAAATTGCCTAATTACATTAGTGCTGTAAAGAATAGATTGCCTTATCCGTATTTCTTATTATTGATTGTTCATGACATTACAGCCCGAGACTCAGCTGGCGACTGGCAAACCAAAGAAAGGTCAAGCTATCCGTAGTGGTGCTTCCTCTTGA

mRNA sequence

ATGGTGAAGTATTCGAGGGAACCAGACAATCCCACCAAGTCCTGCAAAGCCAGAGGCTCGGACCTCAGAGTTCACTTTAAGAACACAAGGGAAACTGCCTTTGCCATTAGGAAGTTGCCACTGGCTAAGGCCAAGAGGTACTTAGAGGATGTACTTGCCCACAAACAGGCCATTCCATTCCGTCGCTTCTGTGGTGGTGTTGGACGAACTGCTCAGGCAAAGAACAGGCATTCCAATGGCCAAGGACGCTGGCCTGTCAAATCTGCAAAGTTTATTCTAGATTTGCTTAAGAATGCCGAGAGCAATGCTGAAGTTAAGGGTCTGGATGTTGATTTGCTCCACGTATCTCACATCCAGGTAAACCAAGCTCAGAAACAAAGGCGTCGTACCTACCGTGCCCATGGAAGAATCAACCCTTACATGTCTTCTCCTTGCCATATTGAGCTGATCTTGTCTGAAAAGGAAGAGCCTGTTAAGAAGGAGCCCGAGACTCAGCTGGCGACTGGCAAACCAAAGAAAGGTCAAGCTATCCGTAGTGGTGCTTCCTCTTGA

Coding sequence (CDS)

ATGGTGAAGTATTCGAGGGAACCAGACAATCCCACCAAGTCCTGCAAAGCCAGAGGCTCGGACCTCAGAGTTCACTTTAAGAACACAAGGGAAACTGCCTTTGCCATTAGGAAGTTGCCACTGGCTAAGGCCAAGAGGTACTTAGAGGATGTACTTGCCCACAAACAGGCCATTCCATTCCGTCGCTTCTGTGGTGGTGTTGGACGAACTGCTCAGGCAAAGAACAGGCATTCCAATGGCCAAGGACGCTGGCCTGTCAAATCTGCAAAGTTTATTCTAGATTTGCTTAAGAATGCCGAGAGCAATGCTGAAGTTAAGGGTCTGGATGTTGATTTGCTCCACGTATCTCACATCCAGGTAAACCAAGCTCAGAAACAAAGGCGTCGTACCTACCGTGCCCATGGAAGAATCAACCCTTACATGTCTTCTCCTTGCCATATTGAGCTGATCTTGTCTGAAAAGGAAGAGCCTGTTAAGAAGGAGCCCGAGACTCAGCTGGCGACTGGCAAACCAAAGAAAGGTCAAGCTATCCGTAGTGGTGCTTCCTCTTGA

Protein sequence

MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAFAIRKLPLAKAKRYLEDVLAHKQAIPFRRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQVNQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQAIRSGASS
Homology
[Close]
BLAST of Lag0004723 vs. NCBI nr
Match: XP_008445497.1 (PREDICTED: 60S ribosomal protein L17-2-like [Cucumis melo])

HSP 1 Score: 365.9 bits (938), Expect = 2.0e-97
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0 

Query: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAFAIRKLPLAKAKRYLEDVLAHKQAIPF 60
           MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAFAIRKLPLAKAKRYLEDVLAHKQAIPF
Sbjct: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAFAIRKLPLAKAKRYLEDVLAHKQAIPF 60

Query: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 120
           RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV
Sbjct: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 120

Query: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQAIRSG 180
           NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQAIRSG
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQAIRSG 180

Query: 181 ASS 184
           ASS
Sbjct: 181 ASS 183

[Close]
BLAST of Lag0004723 vs. NCBI nr
Match: XP_038885177.1 (60S ribosomal protein L17-2-like [Benincasa hispida])

HSP 1 Score: 363.2 bits (931), Expect = 1.3e-96
Identity = 182/183 (99.45%), Postives = 182/183 (99.45%), Query Frame = 0 

Query: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAFAIRKLPLAKAKRYLEDVLAHKQAIPF 60
           MVKYSREPDNPTKSCKARGSDLRVHFKNTRETA AIRKLPLAKAKRYLEDVLAHKQAIPF
Sbjct: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF 60

Query: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 120
           RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV
Sbjct: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 120

Query: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQAIRSG 180
           NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQAIRSG
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQAIRSG 180

Query: 181 ASS 184
           ASS
Sbjct: 181 ASS 183

[Close]
BLAST of Lag0004723 vs. NCBI nr
Match: XP_004144196.1 (60S ribosomal protein L17-2 [Cucumis sativus] >XP_022132326.1 60S ribosomal protein L17-2-like [Momordica charantia] >XP_022962539.1 60S ribosomal protein L17-2-like [Cucurbita moschata] >KAG6598615.1 60S ribosomal protein L17-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 362.8 bits (930), Expect = 1.7e-96
Identity = 181/183 (98.91%), Postives = 182/183 (99.45%), Query Frame = 0 

Query: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAFAIRKLPLAKAKRYLEDVLAHKQAIPF 60
           MVKYSREPDNPTKSCKARGSDLRVHFKNTRETA AIRKLPLAKAKRYLEDVLAHKQAIPF
Sbjct: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF 60

Query: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 120
           RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSH+QV
Sbjct: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHVQV 120

Query: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQAIRSG 180
           NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQAIRSG
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQAIRSG 180

Query: 181 ASS 184
           ASS
Sbjct: 181 ASS 183

[Close]
BLAST of Lag0004723 vs. NCBI nr
Match: XP_023545223.1 (60S ribosomal protein L17-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 361.3 bits (926), Expect = 4.9e-96
Identity = 180/183 (98.36%), Postives = 181/183 (98.91%), Query Frame = 0 

Query: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAFAIRKLPLAKAKRYLEDVLAHKQAIPF 60
           MVKYSREPDNPTKSCKARGSDLRVHFKNTRETA AIRKLPL KAKRYLEDVLAHKQAIPF
Sbjct: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLVKAKRYLEDVLAHKQAIPF 60

Query: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 120
           RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSH+QV
Sbjct: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHVQV 120

Query: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQAIRSG 180
           NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQAIRSG
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQAIRSG 180

Query: 181 ASS 184
           ASS
Sbjct: 181 ASS 183

[Close]
BLAST of Lag0004723 vs. NCBI nr
Match: XP_022997268.1 (60S ribosomal protein L17-2-like [Cucurbita maxima])

HSP 1 Score: 359.0 bits (920), Expect = 2.4e-95
Identity = 179/183 (97.81%), Postives = 181/183 (98.91%), Query Frame = 0 

Query: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAFAIRKLPLAKAKRYLEDVLAHKQAIPF 60
           MVKYSREPDNPTKSCKARGSDLRVHFKNTRETA AIRKLPLAKAKRYLEDVLAHKQAIPF
Sbjct: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAHAIRKLPLAKAKRYLEDVLAHKQAIPF 60

Query: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 120
           RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSH+QV
Sbjct: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHVQV 120

Query: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQAIRSG 180
           NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEE VKKEPETQLATGKPKKGQA+RSG
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEAVKKEPETQLATGKPKKGQALRSG 180

Query: 181 ASS 184
           ASS
Sbjct: 181 ASS 183

[Close]
BLAST of Lag0004723 vs. ExPASy Swiss-Prot
Match: P51413 (60S ribosomal protein L17-2 OS=Arabidopsis thaliana OX=3702 GN=RPL17B PE=2 SV=2)

HSP 1 Score: 310.1 bits (793), Expect = 1.7e-83
Identity = 156/176 (88.64%), Postives = 162/176 (92.05%), Query Frame = 0 

Query: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAFAIRKLPLAKAKRYLEDVLAHKQAIPF 60
           MVKYS+EPDN TKSCKARGSDLRVHFKNTRETA AIRKLPL KAKRYLEDV+AHKQAIPF
Sbjct: 1   MVKYSQEPDNQTKSCKARGSDLRVHFKNTRETAHAIRKLPLIKAKRYLEDVIAHKQAIPF 60

Query: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 120
            RFC GVGRTAQAKNRHSNGQGRWP KSA+F+LDLLKNAESNAEVKGLDVD L +SHIQV
Sbjct: 61  TRFCRGVGRTAQAKNRHSNGQGRWPAKSAQFVLDLLKNAESNAEVKGLDVDALFISHIQV 120

Query: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKGQA 177
           NQA KQRRRTYRAHGRINPYMS+PCHIELILSEKEEPVKKEPETQLA  K KK  A
Sbjct: 121 NQAAKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEPETQLA-AKSKKSAA 175

[Close]
BLAST of Lag0004723 vs. ExPASy Swiss-Prot
Match: Q93VI3 (60S ribosomal protein L17-1 OS=Arabidopsis thaliana OX=3702 GN=RPL17A PE=2 SV=1)

HSP 1 Score: 308.9 bits (790), Expect = 3.8e-83
Identity = 155/174 (89.08%), Postives = 162/174 (93.10%), Query Frame = 0 

Query: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAFAIRKLPLAKAKRYLEDVLAHKQAIPF 60
           MVKYS+EPDN TKSCKARG+DLRVHFKNTRETA AIRKLPL KAKRYLEDV+AHKQAIPF
Sbjct: 1   MVKYSQEPDNITKSCKARGADLRVHFKNTRETAHAIRKLPLNKAKRYLEDVIAHKQAIPF 60

Query: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 120
            RFC GVGRTAQAKNRHSNGQGRWP KSA+F+LDLLKNAESNAEVKGLDVD L +SHIQV
Sbjct: 61  TRFCRGVGRTAQAKNRHSNGQGRWPAKSAQFVLDLLKNAESNAEVKGLDVDALFISHIQV 120

Query: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGKPKKG 175
           NQA KQRRRTYRAHGRINPYMS+PCHIELILSEKEEPVKKEPETQLA  K KKG
Sbjct: 121 NQAAKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEPETQLA-AKSKKG 173

[Close]
BLAST of Lag0004723 vs. ExPASy Swiss-Prot
Match: O48557 (60S ribosomal protein L17 OS=Zea mays OX=4577 GN=RPL17 PE=2 SV=1)

HSP 1 Score: 303.1 bits (775), Expect = 2.1e-81
Identity = 149/170 (87.65%), Postives = 159/170 (93.53%), Query Frame = 0 

Query: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAFAIRKLPLAKAKRYLEDVLAHKQAIPF 60
           MVKYS+EP NPTKS KA G DLRVHFKNTRETAFA+RKLPL KAKRYLEDV+AHKQAIPF
Sbjct: 1   MVKYSQEPGNPTKSAKAMGRDLRVHFKNTRETAFALRKLPLTKAKRYLEDVIAHKQAIPF 60

Query: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 120
           RR+CGGVGRTAQAK+RHSNGQGRWPVKSA+FILDLLKNAESNA+VKGLDVD L+VSHIQV
Sbjct: 61  RRYCGGVGRTAQAKSRHSNGQGRWPVKSARFILDLLKNAESNADVKGLDVDNLYVSHIQV 120

Query: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGK 171
           NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKE +  +A  K
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEADNIVAARK 170

[Close]
BLAST of Lag0004723 vs. ExPASy Swiss-Prot
Match: P35266 (60S ribosomal protein L17-1 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 1.3e-78
Identity = 143/167 (85.63%), Postives = 153/167 (91.62%), Query Frame = 0 

Query: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAFAIRKLPLAKAKRYLEDVLAHKQAIPF 60
           MVKYS +P NPTKS KA G DLRVHFKNTRETAFA+RK+PL KAKRYLEDVLAHKQAIPF
Sbjct: 1   MVKYSTDPANPTKSAKAMGRDLRVHFKNTRETAFALRKMPLNKAKRYLEDVLAHKQAIPF 60

Query: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 120
           RR+C GVGRTAQ KNR  NGQGRWP KSAKF+LDLLKNAESNAEVKGLDVD L++SHIQV
Sbjct: 61  RRYCRGVGRTAQVKNRQPNGQGRWPAKSAKFVLDLLKNAESNAEVKGLDVDALYISHIQV 120

Query: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLA 168
           NQAQKQRRRTYRAHGRINPYMS+PCHIELILSEKEEPVKKE E+ +A
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEAESHIA 167

[Close]
BLAST of Lag0004723 vs. ExPASy Swiss-Prot
Match: P35267 (60S ribosomal protein L17-2 OS=Hordeum vulgare OX=4513 PE=2 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 4.8e-78
Identity = 142/170 (83.53%), Postives = 154/170 (90.59%), Query Frame = 0 

Query: 1   MVKYSREPDNPTKSCKARGSDLRVHFKNTRETAFAIRKLPLAKAKRYLEDVLAHKQAIPF 60
           MVKYSR+P NPTKS KA G DLRVHFKNTRETAFA+R++PL KAKRYLEDVLAHKQAIPF
Sbjct: 1   MVKYSRDPSNPTKSAKACGKDLRVHFKNTRETAFALRRMPLGKAKRYLEDVLAHKQAIPF 60

Query: 61  RRFCGGVGRTAQAKNRHSNGQGRWPVKSAKFILDLLKNAESNAEVKGLDVDLLHVSHIQV 120
           RR+C GVGRTAQ KNR  NGQGRWP KSA+F+LDLLKNAESNAEVKGLDVD L++SHIQV
Sbjct: 61  RRYCRGVGRTAQVKNRQPNGQGRWPAKSAQFVLDLLKNAESNAEVKGLDVDNLYISHIQV 120

Query: 121 NQAQKQRRRTYRAHGRINPYMSSPCHIELILSEKEEPVKKEPETQLATGK 171
           NQAQKQRRRTYRAHGRINPYMS+PCHIELILSEKEEPVKKE +  +A  K
Sbjct: 121 NQAQKQRRRTYRAHGRINPYMSNPCHIELILSEKEEPVKKEADNVVAPRK 170

The following BLAST results are available for this feature:
BLAST of Lag0004723 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008445497.12.0e-97100.00PREDICTED: 60S ribosomal protein L17-2-like [Cucumis melo][more]
XP_038885177.11.3e-9699.4560S ribosomal protein L17-2-like [Benincasa hispida][more]
XP_004144196.11.7e-9698.9160S ribosomal protein L17-2 [Cucumis sativus] >XP_022132326.1 60S ribosomal prot... [more]
XP_023545223.14.9e-9698.3660S ribosomal protein L17-2-like [Cucurbita pepo subsp. pepo][more]
XP_022997268.12.4e-9597.8160S ribosomal protein L17-2-like [Cucurbita maxima][more]
BLAST of Lag0004723 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P514131.7e-8388.6460S ribosomal protein L17-2 OS=Arabidopsis thaliana OX=3702 GN=RPL17B PE=2 SV=2[more]
Q93VI33.8e-8389.0860S ribosomal protein L17-1 OS=Arabidopsis thaliana OX=3702 GN=RPL17A PE=2 SV=1[more]
O485572.1e-8187.6560S ribosomal protein L17 OS=Zea mays OX=4577 GN=RPL17 PE=2 SV=1[more]
P352661.3e-7885.6360S ribosomal protein L17-1 OS=Hordeum vulgare OX=4513 PE=2 SV=1[more]
P352674.8e-7883.5360S ribosomal protein L17-2 OS=Hordeum vulgare OX=4513 PE=2 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005721Ribosomal protein L22/L17, eukaryotic/archaealTIGRFAMTIGR01038TIGR01038coord: 4..154
e-value: 2.5E-60
score: 200.7
IPR005721Ribosomal protein L22/L17, eukaryotic/archaealPANTHERPTHR1159360S RIBOSOMAL PROTEIN L17coord: 1..183
IPR036394Ribosomal protein L22/L17 superfamilyGENE3D3.90.470.10Ribosomal protein L22/L17coord: 1..182
e-value: 7.4E-76
score: 255.9
IPR036394Ribosomal protein L22/L17 superfamilySUPERFAMILY54843Ribosomal protein L22coord: 1..154
IPR001063Ribosomal protein L22/L17PFAMPF00237Ribosomal_L22coord: 17..152
e-value: 6.7E-38
score: 129.1
IPR001063Ribosomal protein L22/L17CDDcd00336Ribosomal_L22coord: 15..151
e-value: 4.13848E-36
score: 119.903
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 154..183
NoneNo IPR availablePANTHERPTHR11593:SF3560S RIBOSOMAL PROTEIN L17-2-LIKEcoord: 1..183
IPR018260Ribosomal protein L22/L17, conserved sitePROSITEPS00464RIBOSOMAL_L22coord: 127..151

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0004723.1Lag0004723.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0015934 large ribosomal subunit
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome