Lag0004393 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0004393
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionDNA polymerase epsilon catalytic subunit A, putative
Locationchr6: 3460969 .. 3468244 (-)
RNA-Seq ExpressionLag0004393
SyntenyLag0004393
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTCTCTAATGGCCGGATGGAACTCTCCCGTTCTCGATCCTAAATCAGGTAATCGAAATGAATTTCGTTCGTATTTTCAACTGATTCATGAATTATTCATCACATTATGTACTGTTTGTTCTGTGGTTAGTTAAACCGTGTACAATTTATACTTTGAATTTTCAGTCAAGTTCAAGAGAAATCGGTCGCTTACAAAGGAGGAAATCGAAGCTTACTGGAGATCGAAGAGGAAATTGGAGGAAGAACATCTCAGAGCGATTTCTATGCCGGTGGATCGTTATGTCGATCGCGATACGATCGGAATAGACTACAAAAGGTCGAGGTCGTTTCCGCCGGCGACCGCTGCGGCGGAGGAAAAAGGATTTGCAGAGAGCGATGTGGAGAGGAAAAACGTAGAGAAATTGAAGAAAAATGGCTGGTAAATTTAAGTCGTTCTATTAATTAATTACTCGATCGCGGATTTTAGCGCTTGAAAATATATAGGAACGAAATTAAGAACCAGAGGTTTGTGTGTTTTGTGCAGGTGGACGAGGAGCAATTCGGCGTTTCTGAATGAACCGCCAGTCCTCGACGGCGCAGCGAAAGCATACGCGTCGCGGTACGGCGTCGCAGACGTGGCCTCGTTCAAGTTGAATCACAGCGATGATGGAGTCGGTGCTTGGTTACACTACTGAAAAGAAAAGAGAAGTTAGTTAAATATATTAATTAGTAATTTATGTAAAATATTTGTATTATAAATATATAGTATTATATAATTATTGTAAGATTTCGGCTCTGTTTGGTTGTAATCTGGAATTTGAAGCTCTGATTTATGGTCAGAATCCAAGACGCAGTAGTTCAACCTTTGTATTTGATCGTCGTGTCTTGAGTTTTCTCTCCATATCTCTTCATGTTTATCTGCGATTAATCTTTGGCGTAGTATCTCTCTTCTCTCTGTTTTCTTTTATTTTTTCCATATTAGCAATAATCTTTTTCTTTTAAGATTTCATGCTTCTCCATGATAATGTAATTTTCTTTTGTCATATATATTGGTCTGTTTTCTAGTTTTTTTTCCTAAAATATTATTGTACTTTAAAGTTTAAACATGGGAGGGAGAATAATTCAAAAGATCATAGAAAAAAAAAAAAAAGATAATTTGGGACCATGATCACATTTTAATTATCAACTTTAATTAGGAGGATTTTTTTTAAATTTTATTTTTAATAATTTCATCATTTTCCTTTTTTTTTTTCCTCGAGTTCAGTAATTTCGTCCAATCCTTATTTATTGATTTATTAAATTGAAAAAGATGTACTTGACCTTTGGTTTAAAGTATTAGTTAAAATTCTATTAGATAATTTTTTTTTCCCGAAATTTAGTTATGAATATAATATTAAAAAATGTATTCATTTAATTTTTTCTTTTAATAACCTGTAGGGAATTTGAACCATAAATCTCATAATCATTAATATAAGTTTTATATATATATATTTTTTTAAGAAATATAAGTTTTATACTAATTGAACTATGCTCTTGTTAATAAATTTATTTTTTAAATAGCATTTTTTTTAGAGAGATTTTTAAATTGCATTTATAATGTTGATAAATATGTATTCATTTTATGTCAGGTCATTTCAATTATAAAATTGGACAACGAATTTAGATGGTGATTAATCAATTGTAATAATTATTAATTAATCTAATTATTGGTAACTCATCATAATTCGCACAATCATTTACTTATGTTTTAAATTTGTAATGATTTTTTTTTCTTTTTTCATCGATTAGTAGGTTTGAACCTATTTTCCACTCTCTATATTGGTTCCTATATGTTATAGGTAATTTTGTATCGTTCCGAAACGCAAAGAGCGGGCGAAAACAATACAATACCAACTCGAAAACACGACCAGGAAGCGGATCCTGGAGGAGAGGTAGGCCGAAGGGATTGGGCCAAGGTCCAATTCCATGCTCGGCCTCAGACTTGGGCCAAGGCCGAGGCTATGGTCGGCCTTGACTCACTTGTATGGGTCGAGTTTCTTTCTCCATGCTTGGTTCTTGGTGTACTTGGTTAGTCTAGTTCGACTTGGTTCAACCTGAATCTGTATTCAGACGTCTAGAAATCCTAAACACAAGAGAAGGTATATAAACCATTCTTCAACCTTGAAAAAAAGATCCAAAACTCTACACAGAAAACTCTCTCCTCTCTTACTCTTGCTCTCTATTTGTCTCCCATCTTTTTCCTGACTGGGGTAGTTTGAAGTTGGGAAACTATTTTGAAAGAAGCGAATTTGGAAAATTTGCAAAAAAACACAATTTAACTTTATTGAATGACAATCACGCTCTTAAACTTTTAATTTGATTAATCATCCCTTGAATATTTTAAAATATATAAATCATTCATAAACTAAACTAAACTAAACTATCGAGATATTGTTATAATCTTTAGAAAAATTAAAACCCATCTATCAATTATCATAGAGGAATATGATATGTGAGTGTAGTTAATTAGATGTTCAGGAGTTAGTTTAGGGTTGAATCCAAAATCGAGTTAAGTAGATATGTCATCAATTATCATTTCAAAGATTAATGATTCAATTTTCCACATTTTATTGAACTAAAAAAAAAATCACATCTTTAATAATTATGTCCCATTTCCTACAACTATTAAATAAAAAATAAGTAGCTAAACAAGATGAAAAAAATTATTAATCAAAATTGAAAAGAATACGAAAGGGTTTATGAATAATATTGCATCATAATTCTTTTCAAATGAAAATCTAAAGCATAATGAAAGTAAAATCAATTACTATATTTATCAAAAAAAAAAAAAAATCAATTACTATATAAGAACCAACAAGAATATAGCTCCATCTCCATAAAGTTGTACTCATAATCATGAGATGTGTGGTTCGAATCCCCACCACACATATTGTCAAAAAAAAAAAAAAATCAATTACTATATAAGGATTAATAACATTCAAATATGGTTTATGAAAGGAAATTGGCTTAGAAGGTCGTCCTTTGTCATATTGACTAATTTCACCCTCATCCAAAGTTTTTTTTTTTTTTTTTTTTTTTTCACAAAGGCCAAAGATAGATTAAATTGAAATTTCATTTTTTTTTCAAATTCAATTTATTTTAGACCATTCAACTTTTAAAATGAATATTTTAATTCCTAAACTTGAAAAAACTAATCATTTCGTCTTACTTGAAAATATGGTTAACTAGGTCTAGGTGTTAGGTTTAATGCTAAGCACTACTAAGTTTTCTTGAAATTGCACTAATAACATTATTGTAGGACTAGGTGCTACTCTCTCTAGTGTCTAAAAAAAGCATATTTTTGCATAGCAACGAGAATTTTGGACACAATGTTATGGGGCACGCTTATCCCACTTATCTTTATTTAAAATGAGAATCTTTTATTCACCTACAAAATAAAATAAAATATAGAGATCTCGTCTAATAGATAGATAATATATGTTTTTAAGTTGAGAAGAAAAGCGTGATGCTATCAAATCAATGCTAAAAACTTTTTCGACTAATATGATTCAATAAAGAGATCTCGTCTCTCATTTTTCCAATTCTTCATTTATTTTGTTATTGCTTTAAAATTCAATATAATATAAAAGCAAATAAGTAGGGTTTTTTTTTCTTTAAATTCGACAATTGTAGAGTGAGAAATGAACCAATTAATGGTTCTTATTAATAAAATACATAATGAAAAAGACAGGAACAAAGTAGTTCGATCACTTCTAAATACTCAATATACTTACAATTACTAACTCTCAACTATAGCAAAGATACAGAAAGCTATGCTACAACATTAAGTACTTTATCCATCTAACCATGCTCGAAATGACACATATGGTTAAATTTGTTGGAGTAACATTTACTAAATTGTATGCTCTCGTTTCAAACTTTGTTATTGATGATTTTTTGAAAAAAAAAAAAACAAATTTTAACATGTAAAATGAAGAAATTCGAACATTTGATCTCTTAATAAAAGGTATATGTGACTTAACCAATTGAACTGAACTCAAATTTGCTAGTTACGATTCCTTTAATGGTTCTTCCAAGTGAAATTTCTGTTTATTTTCTTGCATTTCATAATTGTTACATCTACCATCATGCTTTTGAATTCTATTTCATTTTCTTTTATTTTGATCAATGTGTTTTTATGTAATTTGGAGGTACAACAAACGTACAGTAGACCCACCGGCCACCGGGAACAAACGGGGTAATGGTGGGGTCCACTGGTTGGACTTTATTCCAACATGTAAACCCACGCTTTATTATTATTATTATTTTAATTTATAAACCCACGCTCTAGAAATTAAAAATGGGCCTCGTGGGCCCAATTTCAACGCCCTGGCCCGCTCATGCTTCCGAGTGGGCCTGCATTCATCAGTGCTTATTGTAGTCGTAGTCTTGTCAATTGGCTTATTGGTTAACTTTCAAAATTAATGTTTTTAGGGAAAAATACACTTTTGGTCCCTGAGGTTTGGATTAGGTTTCATTTTGGTCCCTGAGTTTTCAAACTCGACAATTTAGCCCCCGAGGTTTGGATTTCGTTTCATTTTAGTCCCTCCATCCATTTTTCCGTTAAAAACTAACGGAAAGATGACGTGGCATTATCATTTTTATTAAAAAATTATTATTTAATGTTTTAAAATAAAAATATTAAAAATATTATTAATATATATTATTTTTTTTCTTCTTTCTCTCTTTTCTTTTTTTTCTTTCTTCCGTTTCTTCTACTTCTTCTTCTTCTTCATTGCCATCACCAGAGAGTCGTCGGACTCCACCACTGCAGCCATCATCGGACTCCACCGTCGCAGCCGTCGCCGGACTCCACCGCTCACCCATCATCCCTCATCTCTCTCTCACACACCCGTCACTCTCTCTGTGCAATCTCTCCCCGTCGCCGAACACCCAACGTCACTCGTCGCCGCACCTTGCTGAAAACTCGTGCCTCTCGTTGAAAACCTGCCATATTGTCGCTTCCGATTTGGTTTCGTTCCAGATCTAAAGAATGCGTGGGTTTTCAGGCGAAACCATTTCAAATCTGAAAAACGTGGGTTTTTCGGTGAGACCCTCCTCCTCCTCGACGCCATGGGTTTTCCAGCAAAACCATTTCTTCTCTTCTTATTTCAGGCGAGACCGTTTCAGATCTGAAATACGTGGGTTTTTTGGCATTCAGATCTGAAACGGGTTTCAGGCGAGACCGAAACGGGGACAAAACTTTTTACAGCGCGTGGGTTTTTCAGGCGAGACCCTCCTCCTCGACGCTGAAAACCCATGCGGCGACCGGAGGAGAAGAAAATGAAGGATTAAAAAAAAGGAAAATGAAGATGGAGGAGAAAAAAGAGAGGAAAGAAATGTGATGAAAGAAGAAGATTAAAAAAAAAAAAAAGATCGCCGGCGGTCGGTCGGCTGCCGGCAGTGTGCTGGTTGGTGGGTTGAAGAAGAAAGGGTGGGTTGAAGGTTGAAGAAGAAGATTGAGGAGAGGAGAGAGAGAAATAATAGTTAAAAAATAATAATATATTTTTATTAAAAAAATTTAAAATAATTTCTTTTAATTAAAAAATATCGCCACGTCAGCAAATCCGTTAGTTTTTAACGGAAAAATGGATGGAGGGACTAAAATGAAACGAAATCCAAACCTCGGGGGCTAAATTGTCGAGTTTGAAAACTCAGGGACCAAAATGAAACCTAATCCAAACCTCAGGGACCAAAAGTGTATTTTTCCCTTTCATTTTTTAAAGGCAAGCTCTCGTAGCTCAGTTGGTTAGAGCACCCGTTTAGTAAGCGGGAGGTCTTGAGTTCGACTCTCAACGAGAGCATGTTATGTTTGAATTAAAAACAAATGTTTTATTTTTTTTTCTCTGAAATTTTGTGTATGGGATTTAAAATGTAATGCATAGTATGACTTCGAGATTTATGTTAAAGGTAATTTTATTGATGAAAACAAAGTTATTATTATTTTTTAAGTTCCACCTTTTTAAAATGTAATGCATAGTATGACACTTTGAGATTTATGTTAAATGTAAATTTATTGATGAAAACAAATTTATTATTATTTTTTAAGTTCCACCTTTTTAAAATGTAATAGATAGTATGACTTTGAGATTTATGTTAAATGCAAATTTATTCATGAAAACAAAATTATTATTATTTTTTAGGGAAAAATACACTTTTGGTCCCTGAGGTTTGGGTTAGGTTTCATTTTGGTCCCTGAGTTTTCAAATTCGACAATTTAGTCCCTAAGGTTTGGATTTCGTTTCATTTTAGTCCCTCCATCCAATTTTCCGTTAGTATTTAACGGATTGCTGACGTGACATTGATTTTTTTATTAAAATATATATTTTTAATTTTTTAAAATATAAATGTATTAAAATAATAAAAAAAATTATTATTTTATATTAATTTTATTTCTTTATTCTCTCCGTTCCTCATCCTCCTTCTTCTTCTTCCTCAACTCAACCACCATCTCCATCAACCCTCTTCTCAACCACCATCACCACCAACCTCTTTTGCCGTCGACGACCGCCTTTCGCCGCCGGCGACCAATTTTTTTTTTCTCTCTTCTTCCTCCTTTCTTCCTTTCTTCTTCTTTCTCCTCTTTTTTTCTTCTTTTTCTTCCCTCTTCTTCCATTCCCTTTGTTCTTTCACTGGTTTTTTCTTAAAAAAAAAAAGAAGAAAGAAGGGGAAACCCCCTCGAATCCGGCTGGAACGAGGGGGCTTCCCCTTCGTTCCAGATCTGATTCAGATCTGGAATGAAGGGGAAGCCCCCTCGTTCCAGCCGGATTCAAGGGGTTTTCCCCTTCTTTCTATTTTTGTTAACTTTGTTAAAACGTGAATCGAAGGTGGACGACGCCGGCGAAGAAATACGTGGTTACTCAAGGTGGGTTTTGGTGGGTTTCAGTTCGTGATTCGTGGGTTTCGAAGAAAAACGTGAAGGAGGTGGGTATCGGTTTTGAGGTTCTCGAGACGGGAGGGGACGATGGCGTGGGGTCGGCGACGGCGAAAGGAACGAAGCAGGGGAGGCGTTGCTGGTCGCGTGCGAGTGAGAGAGATGGAGAAGGAGAGAAAGAAACAGGGAGAAGGGAAGATGAGAGAAACAGAGAGGGAGGAGAAGAAAGAAAGAAAAGAAGAAAAAAAAGGGAAAGGAAAAGATGGGGAAAGAAAAGAATGAAAAAAAAAAAAAAAAAACTTCGCCGGCGACCTGGTTTGATGGTGGCTGGTATGAAGAAGATGGTGGTTGAAGAAGGAGGTGAGATGGAGAGAGAGTAA

mRNA sequence

ATGGGTTCTCTAATGGCCGGATGGAACTCTCCCGTTCTCGATCCTAAATCAGTCAAGTTCAAGAGAAATCGGTCGCTTACAAAGGAGGAAATCGAAGCTTACTGGAGATCGAAGAGGAAATTGGAGGAAGAACATCTCAGAGCGATTTCTATGCCGGTGGATCGTTATGTCGATCGCGATACGATCGGAATAGACTACAAAAGGTCGAGGTCGTTTCCGCCGGCGACCGCTGCGGCGGAGGAAAAAGGATTTGCAGAGAGCGATGTGGAGAGGAAAAACGTAGAGAAATTGAAGAAAAATGGCTGGTGGACGAGGAGCAATTCGGCGTTTCTGAATGAACCGCCAGTCCTCGACGGCGCAGCGAAAGCATACGCGTCGCGGTACGGCGTCGCAGACGTGGCCTCGTTCAAGTTGAATCACAGCGATGATGGAGTAATTTTGTATCGTTCCGAAACGCAAAGAGCGGGCGAAAACAATACAATACCAACTCGAAAACACGACCAGGAAGCGGATCCTGGAGGAGAGGTAGGCCGAAGGGATTGGGCCAAGGTCCAATTCCATGCTCGGCCTCAGACTTGGGCCAAGGCCGAGGCTATGGTCGGCCTTGACTCACTTGTATGGGTCGAGTTTCTTTCTCCATGCTTGGTTCTTGGTGTACTTGAGAGTCGTCGGACTCCACCACTGCAGCCATCATCGGACTCCACCGTCGCAGCCGTCGCCGGACTCCACCGCTCACCCATCATCCCTCATCTCTCTCTCACACACCCGTCACTCTCTCTGTGCAATCTCTCCCCGTCGCCGAACACCCAACGTCACTCGTCGCCGCACCTTGCTGAAAACTCGTGCCTCTCATCTGAAACGGGTTTCAGGCGAGACCGAAACGGGGACAAAACTTTTTACAGCGCGTGGGTTTTTCAGGCGAGACCCTCCTCCTCGACGCTGAAAACCCATGCGGCGACCGGAGGAGAAGAAAATGAAGGATTAAAAAAAAGGAAAATGAAGATGGAGGAGAAAAAAGAGAGGAAAGAAATGTGGACGACGCCGGCGAAGAAATACGTGGTTACTCAAGGTGGGTTTTGGTGGGTTTCAGTTCGTGATTCGTGGGTTTCGAAGAAAAACGTGAAGGAGGTGGGTATCGGTTTTGAGGTTCTCGAGACGGGAGGGGACGATGGCGTGGGGTCGGCGACGGCGAAAGGAACGAAGCAGGGGAGGCGTTGCTGGTCGCGTGCGAGTGAGAGAGATGGAGAAGGAGAGAAAGAAACAGGGAGAAGGGAAGATGAGAGAAACAGAGAGGGAGGAGAAGAAAGAAAGAAAAGAAGAAAAAAAAGGGAAAGGAAAAGATGGGGAAAGAAAAGAATGAAAAAAAAAAAAAAAAAACTTCGCCGGCGACCTGGTTTGATGGTGGCTGGTATGAAGAAGATGGTGGTTGAAGAAGGAGGTGAGATGGAGAGAGAGTAA

Coding sequence (CDS)

ATGGGTTCTCTAATGGCCGGATGGAACTCTCCCGTTCTCGATCCTAAATCAGTCAAGTTCAAGAGAAATCGGTCGCTTACAAAGGAGGAAATCGAAGCTTACTGGAGATCGAAGAGGAAATTGGAGGAAGAACATCTCAGAGCGATTTCTATGCCGGTGGATCGTTATGTCGATCGCGATACGATCGGAATAGACTACAAAAGGTCGAGGTCGTTTCCGCCGGCGACCGCTGCGGCGGAGGAAAAAGGATTTGCAGAGAGCGATGTGGAGAGGAAAAACGTAGAGAAATTGAAGAAAAATGGCTGGTGGACGAGGAGCAATTCGGCGTTTCTGAATGAACCGCCAGTCCTCGACGGCGCAGCGAAAGCATACGCGTCGCGGTACGGCGTCGCAGACGTGGCCTCGTTCAAGTTGAATCACAGCGATGATGGAGTAATTTTGTATCGTTCCGAAACGCAAAGAGCGGGCGAAAACAATACAATACCAACTCGAAAACACGACCAGGAAGCGGATCCTGGAGGAGAGGTAGGCCGAAGGGATTGGGCCAAGGTCCAATTCCATGCTCGGCCTCAGACTTGGGCCAAGGCCGAGGCTATGGTCGGCCTTGACTCACTTGTATGGGTCGAGTTTCTTTCTCCATGCTTGGTTCTTGGTGTACTTGAGAGTCGTCGGACTCCACCACTGCAGCCATCATCGGACTCCACCGTCGCAGCCGTCGCCGGACTCCACCGCTCACCCATCATCCCTCATCTCTCTCTCACACACCCGTCACTCTCTCTGTGCAATCTCTCCCCGTCGCCGAACACCCAACGTCACTCGTCGCCGCACCTTGCTGAAAACTCGTGCCTCTCATCTGAAACGGGTTTCAGGCGAGACCGAAACGGGGACAAAACTTTTTACAGCGCGTGGGTTTTTCAGGCGAGACCCTCCTCCTCGACGCTGAAAACCCATGCGGCGACCGGAGGAGAAGAAAATGAAGGATTAAAAAAAAGGAAAATGAAGATGGAGGAGAAAAAAGAGAGGAAAGAAATGTGGACGACGCCGGCGAAGAAATACGTGGTTACTCAAGGTGGGTTTTGGTGGGTTTCAGTTCGTGATTCGTGGGTTTCGAAGAAAAACGTGAAGGAGGTGGGTATCGGTTTTGAGGTTCTCGAGACGGGAGGGGACGATGGCGTGGGGTCGGCGACGGCGAAAGGAACGAAGCAGGGGAGGCGTTGCTGGTCGCGTGCGAGTGAGAGAGATGGAGAAGGAGAGAAAGAAACAGGGAGAAGGGAAGATGAGAGAAACAGAGAGGGAGGAGAAGAAAGAAAGAAAAGAAGAAAAAAAAGGGAAAGGAAAAGATGGGGAAAGAAAAGAATGAAAAAAAAAAAAAAAAAACTTCGCCGGCGACCTGGTTTGATGGTGGCTGGTATGAAGAAGATGGTGGTTGAAGAAGGAGGTGAGATGGAGAGAGAGTAA

Protein sequence

MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRDTIGIDYKRSRSFPPATAAAEEKGFAESDVERKNVEKLKKNGWWTRSNSAFLNEPPVLDGAAKAYASRYGVADVASFKLNHSDDGVILYRSETQRAGENNTIPTRKHDQEADPGGEVGRRDWAKVQFHARPQTWAKAEAMVGLDSLVWVEFLSPCLVLGVLESRRTPPLQPSSDSTVAAVAGLHRSPIIPHLSLTHPSLSLCNLSPSPNTQRHSSPHLAENSCLSSETGFRRDRNGDKTFYSAWVFQARPSSSTLKTHAATGGEENEGLKKRKMKMEEKKERKEMWTTPAKKYVVTQGGFWWVSVRDSWVSKKNVKEVGIGFEVLETGGDDGVGSATAKGTKQGRRCWSRASERDGEGEKETGRREDERNREGGEERKKRRKKRERKRWGKKRMKKKKKKLRRRPGLMVAGMKKMVVEEGGEMERE
Homology
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BLAST of Lag0004393 vs. NCBI nr
Match: XP_038886573.1 (uncharacterized protein LOC120076743 [Benincasa hispida])

HSP 1 Score: 242.7 bits (618), Expect = 6.7e-60
Identity = 116/142 (81.69%), Postives = 129/142 (90.85%), Query Frame = 0 

Query: 1   MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRD 60
           MGSLM+GWNSPVLDPKSVKFKRNRSLTK+EIEAYW+SK+K EEEHLRAISMPVDRY+DR+
Sbjct: 1   MGSLMSGWNSPVLDPKSVKFKRNRSLTKDEIEAYWKSKKKSEEEHLRAISMPVDRYIDRE 60

Query: 61  TIGIDYKRSRSFPPATAAAEEKGFAESDVERKNVEKLKKNGWWTRSNSAFLNEPPVLDGA 120
           T+GIDYKRS SFPPA   + E  FAE+D+ER+N+EKLKK GWWTRSNSAFLNEPPVLDGA
Sbjct: 61  TVGIDYKRSSSFPPAKDVSAEAEFAENDLERENLEKLKKIGWWTRSNSAFLNEPPVLDGA 120

Query: 121 AKAYASRYGVADVASFKLNHSD 143
            K YAS YGVADVAS KLNHS+
Sbjct: 121 TKGYASLYGVADVASCKLNHSN 142

[Close]
BLAST of Lag0004393 vs. NCBI nr
Match: XP_023002545.1 (uncharacterized protein LOC111496358 [Cucurbita maxima])

HSP 1 Score: 235.0 bits (598), Expect = 1.4e-57
Identity = 117/136 (86.03%), Postives = 124/136 (91.18%), Query Frame = 0 

Query: 1   MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRD 60
           MGSLM GWNSPVLDPKSVKFKRNRSLTKEEIEAYW+SKRKLEEEHLRAISMP    VDRD
Sbjct: 1   MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIEAYWKSKRKLEEEHLRAISMP----VDRD 60

Query: 61  TIGIDYKRSRSFPPATAAAEEKGFAESDVERKNVEKLKKNGWWTRSNSAFLNEPPVLDGA 120
           T+GIDYKRS SFP A  AAE++ FAESD+ERKN+EKLKKNGWW RSNSAFLNEPPVLDGA
Sbjct: 61  TVGIDYKRSSSFPAAIGAAEKEVFAESDLERKNLEKLKKNGWWRRSNSAFLNEPPVLDGA 120

Query: 121 AKAYASRYGVADVASF 137
           AKAYAS+YGV DVASF
Sbjct: 121 AKAYASQYGVTDVASF 132

[Close]
BLAST of Lag0004393 vs. NCBI nr
Match: KAG6585589.1 (hypothetical protein SDJN03_18322, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020504.1 hypothetical protein SDJN02_17189, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 233.0 bits (593), Expect = 5.3e-57
Identity = 116/136 (85.29%), Postives = 123/136 (90.44%), Query Frame = 0 

Query: 1   MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRD 60
           MGSLM GWNSPVLDPKSVKFKRNRSLTKEEIEAYW+SKRKLEEEHLRAISMP    VDRD
Sbjct: 1   MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIEAYWKSKRKLEEEHLRAISMP----VDRD 60

Query: 61  TIGIDYKRSRSFPPATAAAEEKGFAESDVERKNVEKLKKNGWWTRSNSAFLNEPPVLDGA 120
           T+GIDYKRS SFP A   AE++ FAESD+ERKN+EKLKKNGWW RSNSAFLNEPPVLDGA
Sbjct: 61  TVGIDYKRSSSFPAAIGKAEKEVFAESDLERKNLEKLKKNGWWRRSNSAFLNEPPVLDGA 120

Query: 121 AKAYASRYGVADVASF 137
           AKAYAS+YGV DVASF
Sbjct: 121 AKAYASQYGVTDVASF 132

[Close]
BLAST of Lag0004393 vs. NCBI nr
Match: XP_022951681.1 (uncharacterized protein LOC111454424 [Cucurbita moschata])

HSP 1 Score: 230.3 bits (586), Expect = 3.5e-56
Identity = 115/136 (84.56%), Postives = 122/136 (89.71%), Query Frame = 0 

Query: 1   MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRD 60
           MGSLM GWNSPVLDPKSVKFKRNRSLTKEEIEAYW+SKRKLEEEHLRAISMP    VD D
Sbjct: 1   MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIEAYWKSKRKLEEEHLRAISMP----VDGD 60

Query: 61  TIGIDYKRSRSFPPATAAAEEKGFAESDVERKNVEKLKKNGWWTRSNSAFLNEPPVLDGA 120
           T+GIDYKRS SFP A   AE++ FAESD+ERKN+EKLKKNGWW RSNSAFLNEPPVLDGA
Sbjct: 61  TVGIDYKRSSSFPAAIGKAEKEVFAESDLERKNLEKLKKNGWWRRSNSAFLNEPPVLDGA 120

Query: 121 AKAYASRYGVADVASF 137
           AKAYAS+YGV DVASF
Sbjct: 121 AKAYASQYGVTDVASF 132

[Close]
BLAST of Lag0004393 vs. NCBI nr
Match: XP_023536775.1 (uncharacterized protein LOC111798054 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 228.8 bits (582), Expect = 1.0e-55
Identity = 113/136 (83.09%), Postives = 121/136 (88.97%), Query Frame = 0 

Query: 1   MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRD 60
           MGSLM GWNSPVLDPKSVKFKRNRSLTKEEIEAYW+SKRKLEEEHLRA+SMP    VDRD
Sbjct: 1   MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIEAYWKSKRKLEEEHLRAVSMP----VDRD 60

Query: 61  TIGIDYKRSRSFPPATAAAEEKGFAESDVERKNVEKLKKNGWWTRSNSAFLNEPPVLDGA 120
           T+GIDYKRS SFP A   AE++ F ESD+ERKN+E LKKNGWW RSNSAFLNEPPVLDGA
Sbjct: 61  TVGIDYKRSSSFPAAIGKAEKEVFTESDLERKNLEMLKKNGWWRRSNSAFLNEPPVLDGA 120

Query: 121 AKAYASRYGVADVASF 137
           AKAYAS+YGV DVASF
Sbjct: 121 AKAYASQYGVTDVASF 132

[Close]
BLAST of Lag0004393 vs. ExPASy TrEMBL
Match: A0A6J1KP90 (uncharacterized protein LOC111496358 OS=Cucurbita maxima OX=3661 GN=LOC111496358 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 6.8e-58
Identity = 117/136 (86.03%), Postives = 124/136 (91.18%), Query Frame = 0 

Query: 1   MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRD 60
           MGSLM GWNSPVLDPKSVKFKRNRSLTKEEIEAYW+SKRKLEEEHLRAISMP    VDRD
Sbjct: 1   MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIEAYWKSKRKLEEEHLRAISMP----VDRD 60

Query: 61  TIGIDYKRSRSFPPATAAAEEKGFAESDVERKNVEKLKKNGWWTRSNSAFLNEPPVLDGA 120
           T+GIDYKRS SFP A  AAE++ FAESD+ERKN+EKLKKNGWW RSNSAFLNEPPVLDGA
Sbjct: 61  TVGIDYKRSSSFPAAIGAAEKEVFAESDLERKNLEKLKKNGWWRRSNSAFLNEPPVLDGA 120

Query: 121 AKAYASRYGVADVASF 137
           AKAYAS+YGV DVASF
Sbjct: 121 AKAYASQYGVTDVASF 132

[Close]
BLAST of Lag0004393 vs. ExPASy TrEMBL
Match: A0A6J1GI71 (uncharacterized protein LOC111454424 OS=Cucurbita moschata OX=3662 GN=LOC111454424 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 1.7e-56
Identity = 115/136 (84.56%), Postives = 122/136 (89.71%), Query Frame = 0 

Query: 1   MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRD 60
           MGSLM GWNSPVLDPKSVKFKRNRSLTKEEIEAYW+SKRKLEEEHLRAISMP    VD D
Sbjct: 1   MGSLMGGWNSPVLDPKSVKFKRNRSLTKEEIEAYWKSKRKLEEEHLRAISMP----VDGD 60

Query: 61  TIGIDYKRSRSFPPATAAAEEKGFAESDVERKNVEKLKKNGWWTRSNSAFLNEPPVLDGA 120
           T+GIDYKRS SFP A   AE++ FAESD+ERKN+EKLKKNGWW RSNSAFLNEPPVLDGA
Sbjct: 61  TVGIDYKRSSSFPAAIGKAEKEVFAESDLERKNLEKLKKNGWWRRSNSAFLNEPPVLDGA 120

Query: 121 AKAYASRYGVADVASF 137
           AKAYAS+YGV DVASF
Sbjct: 121 AKAYASQYGVTDVASF 132

[Close]
BLAST of Lag0004393 vs. ExPASy TrEMBL
Match: A0A6J1CTD0 (uncharacterized protein LOC111014033 OS=Momordica charantia OX=3673 GN=LOC111014033 PE=4 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 3.2e-55
Identity = 115/142 (80.99%), Postives = 119/142 (83.80%), Query Frame = 0 

Query: 1   MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRD 60
           MGSLMAGWNSPV DPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVD +VDRD
Sbjct: 1   MGSLMAGWNSPVQDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDPHVDRD 60

Query: 61  TIGIDYKRSRSFPPATAAAEEKGFAESDVERKNVEKLKKNGWWTRSNSAFLNEPPVLDGA 120
            +GIDYKRS SFPPA   AEE     SD ERKN+EKLK N WWTRSNSAFLNEPPVLDGA
Sbjct: 61  VVGIDYKRSSSFPPANGTAEEVFVNRSDFERKNLEKLKPNDWWTRSNSAFLNEPPVLDGA 120

Query: 121 AKAYASRYGVADVASFKLNHSD 143
           AKAYA        ASFKLNHS+
Sbjct: 121 AKAYA--------ASFKLNHSN 134

[Close]
BLAST of Lag0004393 vs. ExPASy TrEMBL
Match: A0A5A7VD66 (Putative DNA polymerase epsilon catalytic subunit A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005630 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.2e-54
Identity = 110/142 (77.46%), Postives = 125/142 (88.03%), Query Frame = 0 

Query: 1   MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRD 60
           MGSLM GW+SPVLDPKSVKFKRNRSLTKEEI+AYW+SKRKLEEEHLRAIS+PVDRY DR+
Sbjct: 1   MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVDRY-DRE 60

Query: 61  TIGIDYKRSRSFPPATAAAEEKGFAESDVERKNVEKLKKNGWWTRSNSAFLNEPPVLDGA 120
            +GIDYKRS SFPPA   A E  F E+ ++RKN+E+L+K GWWTRSNSAFLNEPPVLDGA
Sbjct: 61  KVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKVGWWTRSNSAFLNEPPVLDGA 120

Query: 121 AKAYASRYGVADVASFKLNHSD 143
           +KA  S YGVADVAS KLNH++
Sbjct: 121 SKACVSLYGVADVASCKLNHNN 141

[Close]
BLAST of Lag0004393 vs. ExPASy TrEMBL
Match: A0A1S3BBS7 (uncharacterized protein LOC103487979 OS=Cucumis melo OX=3656 GN=LOC103487979 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 1.2e-54
Identity = 110/142 (77.46%), Postives = 125/142 (88.03%), Query Frame = 0 

Query: 1   MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRKLEEEHLRAISMPVDRYVDRD 60
           MGSLM GW+SPVLDPKSVKFKRNRSLTKEEI+AYW+SKRKLEEEHLRAIS+PVDRY DR+
Sbjct: 1   MGSLMGGWSSPVLDPKSVKFKRNRSLTKEEIDAYWKSKRKLEEEHLRAISLPVDRY-DRE 60

Query: 61  TIGIDYKRSRSFPPATAAAEEKGFAESDVERKNVEKLKKNGWWTRSNSAFLNEPPVLDGA 120
            +GIDYKRS SFPPA   A E  F E+ ++RKN+E+L+K GWWTRSNSAFLNEPPVLDGA
Sbjct: 61  KVGIDYKRSSSFPPARDVAVESKFVENKLDRKNLEELEKVGWWTRSNSAFLNEPPVLDGA 120

Query: 121 AKAYASRYGVADVASFKLNHSD 143
           +KA  S YGVADVAS KLNH++
Sbjct: 121 SKACVSLYGVADVASCKLNHNN 141

[Close]
BLAST of Lag0004393 vs. TAIR 10
Match: AT1G19530.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation, anaerobic respiration; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf apex, inflorescence meristem, hypocotyl, root, flower; EXPRESSED DURING: petal differentiation and expansion stage; Has 47 Blast hits to 47 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 47; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 80.5 bits (197), Expect = 4.1e-15
Identity = 52/135 (38.52%), Postives = 77/135 (57.04%), Query Frame = 0 

Query: 1   MGSLMAGWNSPVLDPKSVKFKRNRSLTKEEIEAYWRSKRK-LEEEHLRAISMPVDRYVDR 60
           MGSLM+GW+S V DPKSV  +R +SLT+EEI+ +W++K+K  EEEH++A S  V +    
Sbjct: 1   MGSLMSGWDSRVRDPKSV--RRCKSLTREEIDTFWKTKKKNEEEEHVQAFSKLVTQ---- 60

Query: 61  DTIGIDYKRSRSFPPATAAAEEKGFAESDVERKNVEKLKKNGWWTRSNSAFLNEPPVLDG 120
                          A + A+EK   +   E ++    K +GWW ++  AFLNEP   +G
Sbjct: 61  -------------EGAQSQAKEKKSVDDLFENQS----KSSGWWRKTYWAFLNEPREEEG 112

Query: 121 AAKAYASRYGVADVA 135
               Y S++ VA +A
Sbjct: 121 RPNNYVSQFKVAHIA 112

The following BLAST results are available for this feature:
BLAST of Lag0004393 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038886573.16.7e-6081.69uncharacterized protein LOC120076743 [Benincasa hispida][more]
XP_023002545.11.4e-5786.03uncharacterized protein LOC111496358 [Cucurbita maxima][more]
KAG6585589.15.3e-5785.29hypothetical protein SDJN03_18322, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022951681.13.5e-5684.56uncharacterized protein LOC111454424 [Cucurbita moschata][more]
XP_023536775.11.0e-5583.09uncharacterized protein LOC111798054 [Cucurbita pepo subsp. pepo][more]
BLAST of Lag0004393 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Lag0004393 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1KP906.8e-5886.03uncharacterized protein LOC111496358 OS=Cucurbita maxima OX=3661 GN=LOC111496358... [more]
A0A6J1GI711.7e-5684.56uncharacterized protein LOC111454424 OS=Cucurbita moschata OX=3662 GN=LOC1114544... [more]
A0A6J1CTD03.2e-5580.99uncharacterized protein LOC111014033 OS=Momordica charantia OX=3673 GN=LOC111014... [more]
A0A5A7VD661.2e-5477.46Putative DNA polymerase epsilon catalytic subunit A OS=Cucumis melo var. makuwa ... [more]
A0A1S3BBS71.2e-5477.46uncharacterized protein LOC103487979 OS=Cucumis melo OX=3656 GN=LOC103487979 PE=... [more]
BLAST of Lag0004393 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G19530.14.1e-1538.52unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 264..288
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 322..342
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 157..178
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 160..178
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 439..466
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 313..342
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 405..438
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 264..289
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 385..485
NoneNo IPR availablePANTHERPTHR33872:SF2DNA POLYMERASE EPSILON CATALYTIC SUBUNIT Acoord: 1..135
NoneNo IPR availablePANTHERPTHR33872DNA POLYMERASE EPSILON CATALYTIC SUBUNIT Acoord: 1..135

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0004393.1Lag0004393.1mRNA