Lag0004112 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0004112
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	ylmG homolog protein 2, chloroplastic
Location	chr6: 1209479 .. 1210986 (+)
RNA-Seq Expression	Lag0004112
Synteny	Lag0004112

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACTCCAGACGAGTCATCAGTCCTAAACCCTAGACCAAGTTCTACGGCTTTCAACTTCTTTCCAAATTGCATATCTTCATTCTCACCGGCATTTTCTCAAGCACCTTCTGCAGCATCCAGGAGAAGGCACGCCGATTTCGTCCCTCCATGTAATTTTCTTCACGACCTCCATGACTCTTTCGCGTCAACAACTGAAAACTGCATCAGATTTTTTCACTCATTAGCTCTCGAGAATCCATTTCTCAACAAATTGCTCTCGTTTTCTTCCGAGTTCCAGAGTTTTCGTCATCAGGTATCTGCAAACTACATGTTACCAACTGTATTTTGACGGTTTCGTGGAGTTGTGATTCGTGTTTCTAATGCTATTGTCTGATGCAATTGCTCTGTTTCTTGCACTTCCATTTACTGTAAAGATCCATTTTCAGCTAGAATATGATCTGTCTCTTGCGGTTGATTTTTCCCGGGGTTTCTAATTTCCGTTTAGTACTTTTGTTGAATTCTATTTCAGATCCACGGTATGAACTCCAGGAATTTCAGAGCTCTCTCCAGTCATAATTTTGCTGCAGTTTTGCCTGGGGATTCGGTGGCAGGAATTGTAGTCGCAAATGGTATTCAAAATTTCTTGAGCCTCTACAATACACTGTTGGTCGTCAGGCTAGTTTTGACTTGGTTTCCGAACACACCTCCCGCCATTGTTAGTCCACTAAGGTAACTTTTATTTGTTTCAGACATTATTGTAAAAAAAAAAGAAGAAGTAGTTTTCACATGATTGATTGTGAGCCTGGAATGCGATTTCTGAACTGAACATAGGATCAAGCTTTTATATCCTTAAAGCTTGAAAGAGGGAAATAACTGTAGTAAGTATTAAGCTAGTGCGATTTAGATCAGAAACTACTGATTCACAGATCACAAACTACTGATTCAGTCACATGTTATCTTTTGCTTAGGGGACAGTTTTCTTAAAACTCTTCTGTCAAACAAATTTTATGGATAAGAAAGTAAAGAAAAAACTATTTCTTATAATTTAGGAAACAATAATTAGTTTTTAAGATGCTCAAACAACCCCAGATTCTTCGATTCTGCCAATTATCTTTTGTATCCATTGATTAGTCCCTCTTAGTTCGTCCTAGATAAAAAATTATATTAAAAATAATAAAAGTATTCTCTATAACTTGCCCTCCCAAACGTTTAGAATCGTTAAATTTTGTGGTAATTGTCATGGTTTGTTTCTCTTTCAGCACGCTATGCGACCCATATTTGAACATATTTCGTGGGATTATCCCACCTCTAGGAGGAACACTTGATTTATCTCCAATATTGGCATTCCTGGTCTTGAACGCCTTTACAAGCACTGCCGCTGCACTTCCTGCTGAACTTCCAGTGCCAAATTCGTCTCTTGCAAATCCAACTCCTTTGAATGGCTCTGTCGATCTTACAACATCACAAAAGAAATGGATGAGAAGGCTTCAGGGAAGTGTAAAGAACAATGATGATGGTGCTCGATAG

mRNA sequence

ATGACTCCAGACGAGTCATCAGTCCTAAACCCTAGACCAAGTTCTACGGCTTTCAACTTCTTTCCAAATTGCATATCTTCATTCTCACCGGCATTTTCTCAAGCACCTTCTGCAGCATCCAGGAGAAGGCACGCCGATTTCGTCCCTCCATGTAATTTTCTTCACGACCTCCATGACTCTTTCGCGTCAACAACTGAAAACTGCATCAGATTTTTTCACTCATTAGCTCTCGAGAATCCATTTCTCAACAAATTGCTCTCGTTTTCTTCCGAGTTCCAGAGTTTTCGTCATCAGATCCACGGTATGAACTCCAGGAATTTCAGAGCTCTCTCCAGTCATAATTTTGCTGCAGTTTTGCCTGGGGATTCGGTGGCAGGAATTGTAGTCGCAAATGGTATTCAAAATTTCTTGAGCCTCTACAATACACTGTTGGTCGTCAGGCTAGTTTTGACTTGGTTTCCGAACACACCTCCCGCCATTGTTAGTCCACTAAGCACGCTATGCGACCCATATTTGAACATATTTCGTGGGATTATCCCACCTCTAGGAGGAACACTTGATTTATCTCCAATATTGGCATTCCTGGTCTTGAACGCCTTTACAAGCACTGCCGCTGCACTTCCTGCTGAACTTCCAGTGCCAAATTCGTCTCTTGCAAATCCAACTCCTTTGAATGGCTCTGTCGATCTTACAACATCACAAAAGAAATGGATGAGAAGGCTTCAGGGAAGTGTAAAGAACAATGATGATGGTGCTCGATAG

Coding sequence (CDS)

ATGACTCCAGACGAGTCATCAGTCCTAAACCCTAGACCAAGTTCTACGGCTTTCAACTTCTTTCCAAATTGCATATCTTCATTCTCACCGGCATTTTCTCAAGCACCTTCTGCAGCATCCAGGAGAAGGCACGCCGATTTCGTCCCTCCATGTAATTTTCTTCACGACCTCCATGACTCTTTCGCGTCAACAACTGAAAACTGCATCAGATTTTTTCACTCATTAGCTCTCGAGAATCCATTTCTCAACAAATTGCTCTCGTTTTCTTCCGAGTTCCAGAGTTTTCGTCATCAGATCCACGGTATGAACTCCAGGAATTTCAGAGCTCTCTCCAGTCATAATTTTGCTGCAGTTTTGCCTGGGGATTCGGTGGCAGGAATTGTAGTCGCAAATGGTATTCAAAATTTCTTGAGCCTCTACAATACACTGTTGGTCGTCAGGCTAGTTTTGACTTGGTTTCCGAACACACCTCCCGCCATTGTTAGTCCACTAAGCACGCTATGCGACCCATATTTGAACATATTTCGTGGGATTATCCCACCTCTAGGAGGAACACTTGATTTATCTCCAATATTGGCATTCCTGGTCTTGAACGCCTTTACAAGCACTGCCGCTGCACTTCCTGCTGAACTTCCAGTGCCAAATTCGTCTCTTGCAAATCCAACTCCTTTGAATGGCTCTGTCGATCTTACAACATCACAAAAGAAATGGATGAGAAGGCTTCAGGGAAGTGTAAAGAACAATGATGATGGTGCTCGATAG

Protein sequence

MTPDESSVLNPRPSSTAFNFFPNCISSFSPAFSQAPSAASRRRHADFVPPCNFLHDLHDSFASTTENCIRFFHSLALENPFLNKLLSFSSEFQSFRHQIHGMNSRNFRALSSHNFAAVLPGDSVAGIVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSLANPTPLNGSVDLTTSQKKWMRRLQGSVKNNDDGAR

Homology

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BLAST of Lag0004112 vs. NCBI nr
Match: XP_038884266.1 (ylmG homolog protein 2, chloroplastic [Benincasa hispida])

HSP 1 Score: 449.9 bits (1156), Expect = 1.5e-122
Identity = 227/253 (89.72%), Postives = 237/253 (93.68%), Query Frame = 0


Query: 1   MTPDESSVLNPRPSSTAFNFFPNCISSFSPAFSQAPSAASRRRHADFVPPCNFLHDLHDS 60
           MTPDESS+LNPR +STAFNFFPNCISSFSPAFSQ PS ASRRR+A+FVPPCNFL D+HDS
Sbjct: 1   MTPDESSLLNPRRTSTAFNFFPNCISSFSPAFSQTPSGASRRRNAEFVPPCNFLRDVHDS 60

Query: 61  FASTTENCIRFFHSLALENPFLNKLLSFSSEFQSFRHQIHGMNSRNFRALSSHNFAAVLP 120
           FASTTE+CIRFFHSLA ENPFL+KLLS  SEFQSFRHQIHGMNSRNFRALSSHNFAAVLP
Sbjct: 61  FASTTESCIRFFHSLASENPFLHKLLSLPSEFQSFRHQIHGMNSRNFRALSSHNFAAVLP 120

Query: 121 GDSVAGIVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180
           GDSVAG+VVANG+QNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP
Sbjct: 121 GDSVAGLVVANGVQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180

Query: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSLANPTPLNGSVDLTTSQKKWMRR 240
           PLGGTLDLSPILAFLVLNAFTSTAAALPAELP PNSSLANPTPL GSVDL  SQKKWMRR
Sbjct: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPAPNSSLANPTPLEGSVDLPASQKKWMRR 240

Query: 241 LQGSVKNNDDGAR 254
           LQGS K   D A+
Sbjct: 241 LQGSGKKKADAAQ 253

[Close]

BLAST of Lag0004112 vs. NCBI nr
Match: KAG7029531.1 (YlmG-like protein 2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 435.3 bits (1118), Expect = 3.7e-118
Identity = 221/253 (87.35%), Postives = 229/253 (90.51%), Query Frame = 0


Query: 1   MTPDESSVLNPRPSSTAFNFFPNCISSFSPAFSQAPSAASRRRHADFVPPCNFLHDLHDS 60
           MTPDESSVLNPR SSTAF+FFPNCISSFSPAFSQ P  ASRRRH DFVPPC FL DLH+S
Sbjct: 1   MTPDESSVLNPRRSSTAFSFFPNCISSFSPAFSQTPFGASRRRHVDFVPPCKFLRDLHES 60

Query: 61  FASTTENCIRFFHSLALENPFLNKLLSFSSEFQSFRHQIHGMNSRNFRALSSHNFAAVLP 120
           FA T E CI FFHSLA ENPFLNKL+S SSE QSF HQIHGMNSRNFRALSSHNFAAVLP
Sbjct: 61  FALTAEKCIVFFHSLASENPFLNKLMSLSSELQSFHHQIHGMNSRNFRALSSHNFAAVLP 120

Query: 121 GDSVAGIVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180
           GDSVAG++V NGIQNFLS+YNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP
Sbjct: 121 GDSVAGLLVTNGIQNFLSIYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180

Query: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSLANPTPLNGSVDLTTSQKKWMRR 240
           PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSLAN TP  GS DLTTSQKKW+RR
Sbjct: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSLANATPSKGSFDLTTSQKKWIRR 240

Query: 241 LQGSVKNNDDGAR 254
           LQGS +N  D AR
Sbjct: 241 LQGSGENKADSAR 253

[Close]

BLAST of Lag0004112 vs. NCBI nr
Match: XP_023547092.1 (ylmG homolog protein 2, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 434.9 bits (1117), Expect = 4.8e-118
Identity = 221/253 (87.35%), Postives = 229/253 (90.51%), Query Frame = 0


Query: 1   MTPDESSVLNPRPSSTAFNFFPNCISSFSPAFSQAPSAASRRRHADFVPPCNFLHDLHDS 60
           MTPDESSVLNPR SSTAF+F PNCISSFSPAFSQ P  ASRRRH DFVPPC FL DLH+S
Sbjct: 1   MTPDESSVLNPRRSSTAFSFVPNCISSFSPAFSQTPFGASRRRHVDFVPPCKFLRDLHES 60

Query: 61  FASTTENCIRFFHSLALENPFLNKLLSFSSEFQSFRHQIHGMNSRNFRALSSHNFAAVLP 120
           FAST E CI FFHSLA ENPFLNKL+S SSE QSF HQIHGMNSRNFRALSSHNFAAVLP
Sbjct: 61  FASTAEKCIVFFHSLASENPFLNKLMSLSSELQSFHHQIHGMNSRNFRALSSHNFAAVLP 120

Query: 121 GDSVAGIVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180
           GDSVAG++V NGIQNFLS+YNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP
Sbjct: 121 GDSVAGLLVTNGIQNFLSIYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180

Query: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSLANPTPLNGSVDLTTSQKKWMRR 240
           PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSS AN TP  GS DLTTSQKKW+RR
Sbjct: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSPANATPSKGSFDLTTSQKKWIRR 240

Query: 241 LQGSVKNNDDGAR 254
           LQGSV+N  D AR
Sbjct: 241 LQGSVENKADSAR 253

[Close]

BLAST of Lag0004112 vs. NCBI nr
Match: XP_022961827.1 (ylmG homolog protein 2, chloroplastic [Cucurbita moschata])

HSP 1 Score: 432.6 bits (1111), Expect = 2.4e-117
Identity = 219/253 (86.56%), Postives = 229/253 (90.51%), Query Frame = 0


Query: 1   MTPDESSVLNPRPSSTAFNFFPNCISSFSPAFSQAPSAASRRRHADFVPPCNFLHDLHDS 60
           MTPDESSVLNPR SSTAF+FFPNCISSFSPAFSQ P  ASRRRH DFVPPC FL DLH+S
Sbjct: 1   MTPDESSVLNPRRSSTAFSFFPNCISSFSPAFSQTPFGASRRRHVDFVPPCKFLRDLHES 60

Query: 61  FASTTENCIRFFHSLALENPFLNKLLSFSSEFQSFRHQIHGMNSRNFRALSSHNFAAVLP 120
           FA T E CI FFHSLA ENPFLNKL+S SSE QSF HQIHG+NSRNFRALSSHNFAAVLP
Sbjct: 61  FALTAEKCIVFFHSLASENPFLNKLMSLSSELQSFHHQIHGLNSRNFRALSSHNFAAVLP 120

Query: 121 GDSVAGIVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180
           GDSVAG++V NGIQNFLS+YNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP
Sbjct: 121 GDSVAGLLVTNGIQNFLSIYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180

Query: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSLANPTPLNGSVDLTTSQKKWMRR 240
           PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSLAN TP  GS DLT+SQKKW+RR
Sbjct: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSLANATPSKGSFDLTSSQKKWIRR 240

Query: 241 LQGSVKNNDDGAR 254
           LQGS +N  D AR
Sbjct: 241 LQGSGENKADSAR 253

[Close]

BLAST of Lag0004112 vs. NCBI nr
Match: KAG6598598.1 (YlmG-like protein 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 427.9 bits (1099), Expect = 5.9e-116
Identity = 216/243 (88.89%), Postives = 223/243 (91.77%), Query Frame = 0


Query: 1   MTPDESSVLNPRPSSTAFNFFPNCISSFSPAFSQAPSAASRRRHADFVPPCNFLHDLHDS 60
           MTPDESSVLNPR SSTAF+FFPNCISSFSPAFSQ P  ASRRRH DFVPPC FL DLH+S
Sbjct: 1   MTPDESSVLNPRRSSTAFSFFPNCISSFSPAFSQTPFGASRRRHVDFVPPCKFLRDLHES 60

Query: 61  FASTTENCIRFFHSLALENPFLNKLLSFSSEFQSFRHQIHGMNSRNFRALSSHNFAAVLP 120
           FA T E CI FFHSLA ENPFLNKL+S SSE QSF HQIHGMNSRNFRALSSHNFAAVLP
Sbjct: 61  FALTAEKCIVFFHSLASENPFLNKLMSLSSELQSFHHQIHGMNSRNFRALSSHNFAAVLP 120

Query: 121 GDSVAGIVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180
           GDSVAG++V NGIQNFLS+YNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP
Sbjct: 121 GDSVAGLLVTNGIQNFLSIYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180

Query: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSLANPTPLNGSVDLTTSQKKWMRR 240
           PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSLAN TP  GS DLTTSQKKW+RR
Sbjct: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSLANATPSKGSFDLTTSQKKWIRR 240

Query: 241 LQG 244
           LQG
Sbjct: 241 LQG 243

[Close]

BLAST of Lag0004112 vs. ExPASy Swiss-Prot
Match: Q9C595 (YlmG homolog protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=YLMG2 PE=2 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 5.5e-56
Identity = 125/224 (55.80%), Postives = 150/224 (66.96%), Query Frame = 0


Query: 22  PNCISSFSPAFSQAPSAASRRRHADFVPP----CNFLHDLHDSFASTTENCIRFFHSLAL 81
           PN   S S AF+Q P   S + +   +PP       + D H S  S TE    F HSLA 
Sbjct: 22  PNFFVSLSSAFTQTPLVRSNKPNLLLLPPVADSVKLIQDFHQSLISATEKFKGFLHSLAS 81

Query: 82  ENPFLNKLLSFSSEFQSFRHQIHGMNSRNFR-ALSSHNFAAVLPGDSVAGIVVANGIQNF 141
           +NP   + +  SSEF     +I   N+   R A+S+H FAAVLPGDSVAG+VVANG+ NF
Sbjct: 82  KNPLFQEAVRLSSEFHILCDEIRLRNTTRVRFAMSNHGFAAVLPGDSVAGLVVANGLINF 141

Query: 142 LSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFLV 201
           L++YNT+LVVRLVLTWFP+ PPAIV+PLSTLCDPYLNIFRG IPPLGG LDLSPILAFLV
Sbjct: 142 LNIYNTILVVRLVLTWFPSAPPAIVNPLSTLCDPYLNIFRGFIPPLGG-LDLSPILAFLV 201

Query: 202 LNAFTSTAAALPAELPVPNSSLANPTPLNGSVDLTTSQKKWMRR 241
           LNAFTS+A ALP ELP            +G+V   +S+ KW+RR
Sbjct: 202 LNAFTSSAMALPCELP----------SADGAVSPASSETKWVRR 234

[Close]

BLAST of Lag0004112 vs. ExPASy Swiss-Prot
Match: Q9SRS3 (YlmG homolog protein 1-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=YLMG1-1 PE=2 SV=1)

HSP 1 Score: 80.5 bits (197), Expect = 3.0e-14
Identity = 41/77 (53.25%), Postives = 56/77 (72.73%), Query Frame = 0


Query: 128 VVANGIQNFLSLYNTLLVVRLVLTWFPNTP--PAIVSPLSTLCDPYLNIFRGIIPPLGGT 187
           VVA GI+ +L +Y+ +L+VR++L+WFPN P     +S +  LCDPYLN+FR IIPP+  T
Sbjct: 149 VVAVGIKKWLDIYSGVLMVRVLLSWFPNIPWERQPLSAIRDLCDPYLNLFRNIIPPIFDT 208

Query: 188 LDLSPILAFLVLNAFTS 203
           LD+SP+LAF VL    S
Sbjct: 209 LDVSPLLAFAVLGTLGS 225

[Close]

BLAST of Lag0004112 vs. ExPASy Swiss-Prot
Match: Q9SUE0 (YlmG homolog protein 1-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=YLMG1-2 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 6.8e-14
Identity = 40/77 (51.95%), Postives = 55/77 (71.43%), Query Frame = 0


Query: 128 VVANGIQNFLSLYNTLLVVRLVLTWFPNTP--PAIVSPLSTLCDPYLNIFRGIIPPLGGT 187
           VVA G+  +L +Y+ +L+VR++L+WFPN P     +S +  LCDPYLN+FR IIPP+  T
Sbjct: 135 VVAAGLSKWLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPVFDT 194

Query: 188 LDLSPILAFLVLNAFTS 203
           LD+SP+LAF VL    S
Sbjct: 195 LDVSPLLAFAVLGTLGS 211

[Close]

BLAST of Lag0004112 vs. ExPASy Swiss-Prot
Match: O78424 (Uncharacterized protein ycf19 OS=Guillardia theta OX=55529 GN=ycf19 PE=3 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 3.2e-08
Identity = 33/64 (51.56%), Postives = 44/64 (68.75%), Query Frame = 0


Query: 136 FLSLYNTLLVVRLVLTWFPNTP--PAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILA 195
           FL +Y  LL++R+ LTWFPN          LS + DPYL +FRGI+PPL G +D+SPIL 
Sbjct: 15  FLQIYLILLLIRVSLTWFPNVNWYGQPFYSLSRITDPYLKMFRGIVPPLIG-IDISPILG 74

Query: 196 FLVL 198
           F++L
Sbjct: 75  FILL 77

[Close]

BLAST of Lag0004112 vs. ExPASy Swiss-Prot
Match: P51353 (Uncharacterized protein ycf19 OS=Porphyra purpurea OX=2787 GN=ycf19 PE=3 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 3.4e-05
Identity = 28/72 (38.89%), Postives = 43/72 (59.72%), Query Frame = 0


Query: 128 VVANGIQNFLSLYNTLLVVRLVLTWFP--NTPPAIVSPLSTLCDPYLNIFRGIIPPLGGT 187
           ++   I NF  +Y  L++++L L WFP  N        L+ + DPYL +FRG IPP+ G 
Sbjct: 10  LLLGSIANFSEIYLILILLKLSLAWFPTVNWYNEPFCSLNRITDPYLKLFRGSIPPMFG- 69

Query: 188 LDLSPILAFLVL 198
           +D+SP+L  + L
Sbjct: 70  MDMSPMLGIIFL 80

[Close]

BLAST of Lag0004112 vs. ExPASy TrEMBL
Match: A0A6J1HB64 (ylmG homolog protein 2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111462476 PE=4 SV=1)

HSP 1 Score: 432.6 bits (1111), Expect = 1.2e-117
Identity = 219/253 (86.56%), Postives = 229/253 (90.51%), Query Frame = 0


Query: 1   MTPDESSVLNPRPSSTAFNFFPNCISSFSPAFSQAPSAASRRRHADFVPPCNFLHDLHDS 60
           MTPDESSVLNPR SSTAF+FFPNCISSFSPAFSQ P  ASRRRH DFVPPC FL DLH+S
Sbjct: 1   MTPDESSVLNPRRSSTAFSFFPNCISSFSPAFSQTPFGASRRRHVDFVPPCKFLRDLHES 60

Query: 61  FASTTENCIRFFHSLALENPFLNKLLSFSSEFQSFRHQIHGMNSRNFRALSSHNFAAVLP 120
           FA T E CI FFHSLA ENPFLNKL+S SSE QSF HQIHG+NSRNFRALSSHNFAAVLP
Sbjct: 61  FALTAEKCIVFFHSLASENPFLNKLMSLSSELQSFHHQIHGLNSRNFRALSSHNFAAVLP 120

Query: 121 GDSVAGIVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180
           GDSVAG++V NGIQNFLS+YNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP
Sbjct: 121 GDSVAGLLVTNGIQNFLSIYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180

Query: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSLANPTPLNGSVDLTTSQKKWMRR 240
           PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSLAN TP  GS DLT+SQKKW+RR
Sbjct: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSLANATPSKGSFDLTSSQKKWIRR 240

Query: 241 LQGSVKNNDDGAR 254
           LQGS +N  D AR
Sbjct: 241 LQGSGENKADSAR 253

[Close]

BLAST of Lag0004112 vs. ExPASy TrEMBL
Match: A0A5D3BN87 (YlmG-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold187G00120 PE=4 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 2.9e-116
Identity = 217/250 (86.80%), Postives = 227/250 (90.80%), Query Frame = 0


Query: 1   MTPDESSVLNPRPSSTAFNFFPNCISSFSPAFSQAPSAASRRRHADFVPPCNFLHDLHDS 60
           MTP ESS+ NP+ +STAFNFFPNCISSFSPAFSQ PS  SRRR  +F  PCNFL DLH+S
Sbjct: 1   MTPHESSLQNPKRTSTAFNFFPNCISSFSPAFSQTPSGPSRRRQPEFASPCNFLRDLHES 60

Query: 61  FASTTENCIRFFHSLALENPFLNKLLSFSSEFQSFRHQIHGMNSRNFRALSSHNFAAVLP 120
           FASTTE+CIR FHS A ENPFL+KLLS  SEFQSFR QIH MNSRNFRALSSHNFAAVLP
Sbjct: 61  FASTTESCIRLFHSFASENPFLHKLLSLPSEFQSFRFQIHSMNSRNFRALSSHNFAAVLP 120

Query: 121 GDSVAGIVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180
           GDS+AG+VVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP
Sbjct: 121 GDSMAGLVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180

Query: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSLANPTPLNGSVDLTTSQKKWMRR 240
           PLGGTLDLSPILAFLVLNAFTSTAAALPAELP PNSSLANP PL GSVDLT+SQKKWMRR
Sbjct: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPAPNSSLANPNPLEGSVDLTSSQKKWMRR 240

Query: 241 LQGSVKNNDD 251
           LQGS KNN D
Sbjct: 241 LQGSGKNNAD 250

[Close]

BLAST of Lag0004112 vs. ExPASy TrEMBL
Match: A0A1S3BDU1 (ylmG homolog protein 2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488523 PE=4 SV=1)

HSP 1 Score: 427.9 bits (1099), Expect = 2.9e-116
Identity = 217/250 (86.80%), Postives = 227/250 (90.80%), Query Frame = 0


Query: 1   MTPDESSVLNPRPSSTAFNFFPNCISSFSPAFSQAPSAASRRRHADFVPPCNFLHDLHDS 60
           MTP ESS+ NP+ +STAFNFFPNCISSFSPAFSQ PS  SRRR  +F  PCNFL DLH+S
Sbjct: 1   MTPHESSLQNPKRTSTAFNFFPNCISSFSPAFSQTPSGPSRRRQPEFASPCNFLRDLHES 60

Query: 61  FASTTENCIRFFHSLALENPFLNKLLSFSSEFQSFRHQIHGMNSRNFRALSSHNFAAVLP 120
           FASTTE+CIR FHS A ENPFL+KLLS  SEFQSFR QIH MNSRNFRALSSHNFAAVLP
Sbjct: 61  FASTTESCIRLFHSFASENPFLHKLLSLPSEFQSFRFQIHSMNSRNFRALSSHNFAAVLP 120

Query: 121 GDSVAGIVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180
           GDS+AG+VVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP
Sbjct: 121 GDSMAGLVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180

Query: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSLANPTPLNGSVDLTTSQKKWMRR 240
           PLGGTLDLSPILAFLVLNAFTSTAAALPAELP PNSSLANP PL GSVDLT+SQKKWMRR
Sbjct: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPAPNSSLANPNPLEGSVDLTSSQKKWMRR 240

Query: 241 LQGSVKNNDD 251
           LQGS KNN D
Sbjct: 241 LQGSGKNNAD 250

[Close]

BLAST of Lag0004112 vs. ExPASy TrEMBL
Match: A0A6J1K921 (ylmG homolog protein 2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111492206 PE=4 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 3.7e-116
Identity = 218/250 (87.20%), Postives = 226/250 (90.40%), Query Frame = 0


Query: 1   MTPDESSVLNPRPSSTAFNFFPNCISSFSPAFSQAPSAASRRRHADFVPPCNFLHDLHDS 60
           MTPDESSVLNPR SSTAF+FFPNCISSFSPAFSQ P   SRRRH DF PP  FL DLH+S
Sbjct: 1   MTPDESSVLNPRRSSTAFSFFPNCISSFSPAFSQTPFGGSRRRHVDFFPPRKFLRDLHES 60

Query: 61  FASTTENCIRFFHSLALENPFLNKLLSFSSEFQSFRHQIHGMNSRNFRALSSHNFAAVLP 120
           FAST E CI FFHSLA ENPFL+KL+S SSEFQSF HQIHGMNSRNFRALSSHNFAAVLP
Sbjct: 61  FASTAEKCIVFFHSLASENPFLDKLMSLSSEFQSFHHQIHGMNSRNFRALSSHNFAAVLP 120

Query: 121 GDSVAGIVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180
           GDSVAGI+V NGIQNFLS+YNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP
Sbjct: 121 GDSVAGILVTNGIQNFLSIYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180

Query: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSLANPTPLNGSVDLTTSQKKWMRR 240
           PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSLAN TP  GS DLTTSQKKW+RR
Sbjct: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSLANATPSKGSFDLTTSQKKWIRR 240

Query: 241 LQGSVKNNDD 251
           LQGS +N  D
Sbjct: 241 LQGSGENKAD 250

[Close]

BLAST of Lag0004112 vs. ExPASy TrEMBL
Match: A0A6J1BR74 (ylmG homolog protein 2, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111004850 PE=4 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 3.7e-116
Identity = 218/253 (86.17%), Postives = 225/253 (88.93%), Query Frame = 0


Query: 1   MTPDESSVLNPRPSSTAFNFFPNCISSFSPAFSQAPSAASRRRHADFVPPCNFLHDLHDS 60
           M PDESSVLNPR  ST FNF PNC+SSFSPAFSQ     SRRRHADF PPCNFL DLH+S
Sbjct: 1   MAPDESSVLNPRRRSTGFNFVPNCVSSFSPAFSQTAFGVSRRRHADFGPPCNFLRDLHES 60

Query: 61  FASTTENCIRFFHSLALENPFLNKLLSFSSEFQSFRHQIHGMNSRNFRALSSHNFAAVLP 120
           FAST E CI F HSLA ENPFL KLLS SSEFQSFRHQIH MNSRNFRALSSHNFAAVLP
Sbjct: 61  FASTAEKCIVFVHSLASENPFLKKLLSLSSEFQSFRHQIHCMNSRNFRALSSHNFAAVLP 120

Query: 121 GDSVAGIVVANGIQNFLSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180
           GDS+AGIVV+NGIQNFLS+YNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP
Sbjct: 121 GDSLAGIVVSNGIQNFLSIYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIP 180

Query: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNSSLANPTPLNGSVDLTTSQKKWMRR 240
           PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPN+SLANPTPL GS DLTTSQ KWMRR
Sbjct: 181 PLGGTLDLSPILAFLVLNAFTSTAAALPAELPVPNTSLANPTPLKGSADLTTSQNKWMRR 240

Query: 241 LQGSVKNNDDGAR 254
           LQG    N DG+R
Sbjct: 241 LQGIGTRNADGSR 253

[Close]

BLAST of Lag0004112 vs. TAIR 10
Match: AT5G21920.1 (YGGT family protein )

HSP 1 Score: 219.2 bits (557), Expect = 3.9e-57
Identity = 125/224 (55.80%), Postives = 150/224 (66.96%), Query Frame = 0


Query: 22  PNCISSFSPAFSQAPSAASRRRHADFVPP----CNFLHDLHDSFASTTENCIRFFHSLAL 81
           PN   S S AF+Q P   S + +   +PP       + D H S  S TE    F HSLA 
Sbjct: 22  PNFFVSLSSAFTQTPLVRSNKPNLLLLPPVADSVKLIQDFHQSLISATEKFKGFLHSLAS 81

Query: 82  ENPFLNKLLSFSSEFQSFRHQIHGMNSRNFR-ALSSHNFAAVLPGDSVAGIVVANGIQNF 141
           +NP   + +  SSEF     +I   N+   R A+S+H FAAVLPGDSVAG+VVANG+ NF
Sbjct: 82  KNPLFQEAVRLSSEFHILCDEIRLRNTTRVRFAMSNHGFAAVLPGDSVAGLVVANGLINF 141

Query: 142 LSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFLV 201
           L++YNT+LVVRLVLTWFP+ PPAIV+PLSTLCDPYLNIFRG IPPLGG LDLSPILAFLV
Sbjct: 142 LNIYNTILVVRLVLTWFPSAPPAIVNPLSTLCDPYLNIFRGFIPPLGG-LDLSPILAFLV 201

Query: 202 LNAFTSTAAALPAELPVPNSSLANPTPLNGSVDLTTSQKKWMRR 241
           LNAFTS+A ALP ELP            +G+V   +S+ KW+RR
Sbjct: 202 LNAFTSSAMALPCELP----------SADGAVSPASSETKWVRR 234

[Close]

BLAST of Lag0004112 vs. TAIR 10
Match: AT5G21920.2 (YGGT family protein )

HSP 1 Score: 207.2 bits (526), Expect = 1.5e-53
Identity = 122/224 (54.46%), Postives = 145/224 (64.73%), Query Frame = 0


Query: 22  PNCISSFSPAFSQAPSAASRRRHADFVPP----CNFLHDLHDSFASTTENCIRFFHSLAL 81
           PN   S S AF+Q P   S + +   +PP       + D H S  S TE    F HSLA 
Sbjct: 22  PNFFVSLSSAFTQTPLVRSNKPNLLLLPPVADSVKLIQDFHQSLISATEKFKGFLHSLAS 81

Query: 82  ENPFLNKLLSFSSEFQSFRHQIHGMNSRNFR-ALSSHNFAAVLPGDSVAGIVVANGIQNF 141
           +NP              F+  I   N+   R A+S+H FAAVLPGDSVAG+VVANG+ NF
Sbjct: 82  KNPL-------------FQEAIRLRNTTRVRFAMSNHGFAAVLPGDSVAGLVVANGLINF 141

Query: 142 LSLYNTLLVVRLVLTWFPNTPPAIVSPLSTLCDPYLNIFRGIIPPLGGTLDLSPILAFLV 201
           L++YNT+LVVRLVLTWFP+ PPAIV+PLSTLCDPYLNIFRG IPPLGG LDLSPILAFLV
Sbjct: 142 LNIYNTILVVRLVLTWFPSAPPAIVNPLSTLCDPYLNIFRGFIPPLGG-LDLSPILAFLV 201

Query: 202 LNAFTSTAAALPAELPVPNSSLANPTPLNGSVDLTTSQKKWMRR 241
           LNAFTS+A ALP ELP            +G+V   +S+ KW+RR
Sbjct: 202 LNAFTSSAMALPCELP----------SADGAVSPASSETKWVRR 221

[Close]

BLAST of Lag0004112 vs. TAIR 10
Match: AT3G07430.1 (YGGT family protein )

HSP 1 Score: 80.5 bits (197), Expect = 2.2e-15
Identity = 41/77 (53.25%), Postives = 56/77 (72.73%), Query Frame = 0


Query: 128 VVANGIQNFLSLYNTLLVVRLVLTWFPNTP--PAIVSPLSTLCDPYLNIFRGIIPPLGGT 187
           VVA GI+ +L +Y+ +L+VR++L+WFPN P     +S +  LCDPYLN+FR IIPP+  T
Sbjct: 149 VVAVGIKKWLDIYSGVLMVRVLLSWFPNIPWERQPLSAIRDLCDPYLNLFRNIIPPIFDT 208

Query: 188 LDLSPILAFLVLNAFTS 203
           LD+SP+LAF VL    S
Sbjct: 209 LDVSPLLAFAVLGTLGS 225

[Close]

BLAST of Lag0004112 vs. TAIR 10
Match: AT4G27990.1 (YGGT family protein )

HSP 1 Score: 79.3 bits (194), Expect = 4.8e-15
Identity = 40/77 (51.95%), Postives = 55/77 (71.43%), Query Frame = 0


Query: 128 VVANGIQNFLSLYNTLLVVRLVLTWFPNTP--PAIVSPLSTLCDPYLNIFRGIIPPLGGT 187
           VVA G+  +L +Y+ +L+VR++L+WFPN P     +S +  LCDPYLN+FR IIPP+  T
Sbjct: 135 VVAAGLSKWLDIYSGVLMVRVLLSWFPNIPWDRQPLSAIRDLCDPYLNLFRNIIPPVFDT 194

Query: 188 LDLSPILAFLVLNAFTS 203
           LD+SP+LAF VL    S
Sbjct: 195 LDVSPLLAFAVLGTLGS 211

The following BLAST results are available for this feature:

BLAST of Lag0004112 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884266.1	1.5e-122	89.72	ylmG homolog protein 2, chloroplastic [Benincasa hispida]	[more]
KAG7029531.1	3.7e-118	87.35	YlmG-like protein 2, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_023547092.1	4.8e-118	87.35	ylmG homolog protein 2, chloroplastic [Cucurbita pepo subsp. pepo]	[more]
XP_022961827.1	2.4e-117	86.56	ylmG homolog protein 2, chloroplastic [Cucurbita moschata]	[more]
KAG6598598.1	5.9e-116	88.89	YlmG-like protein 2, chloroplastic, partial [Cucurbita argyrosperma subsp. soror...	[more]

BLAST of Lag0004112 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C595	5.5e-56	55.80	YlmG homolog protein 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=YLMG2 P...	[more]
Q9SRS3	3.0e-14	53.25	YlmG homolog protein 1-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=YLMG1...	[more]
Q9SUE0	6.8e-14	51.95	YlmG homolog protein 1-2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=YLMG1...	[more]
O78424	3.2e-08	51.56	Uncharacterized protein ycf19 OS=Guillardia theta OX=55529 GN=ycf19 PE=3 SV=1	[more]
P51353	3.4e-05	38.89	Uncharacterized protein ycf19 OS=Porphyra purpurea OX=2787 GN=ycf19 PE=3 SV=1	[more]

BLAST of Lag0004112 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HB64	1.2e-117	86.56	ylmG homolog protein 2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111462...	[more]
A0A5D3BN87	2.9e-116	86.80	YlmG-like protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold187G...	[more]
A0A1S3BDU1	2.9e-116	86.80	ylmG homolog protein 2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103488523 PE...	[more]
A0A6J1K921	3.7e-116	87.20	ylmG homolog protein 2, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11149220...	[more]
A0A6J1BR74	3.7e-116	86.17	ylmG homolog protein 2, chloroplastic OS=Momordica charantia OX=3673 GN=LOC11100...	[more]

BLAST of Lag0004112 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G21920.1	3.9e-57	55.80	YGGT family protein	[more]
AT5G21920.2	1.5e-53	54.46	YGGT family protein	[more]
AT3G07430.1	2.2e-15	53.25	YGGT family protein	[more]
AT4G27990.1	4.8e-15	51.95	YGGT family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003425	CCB3/YggT	PFAM	PF02325	YGGT	coord: 136..199 e-value: 3.2E-15 score: 56.3
IPR003425	CCB3/YggT	PANTHER	PTHR33219	YLMG HOMOLOG PROTEIN 2, CHLOROPLASTIC	coord: 56..244
None	No IPR available	PANTHER	PTHR33219:SF1	YLMG HOMOLOG PROTEIN 2, CHLOROPLASTIC	coord: 56..244

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0004112.1	Lag0004112.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010020	chloroplast fission
biological_process	GO:0090143	nucleoid organization
cellular_component	GO:0016020	membrane