
Lag0003172 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTCAAAGCTGGAACTCTCACCAAGCTCAAATCAGCCATTAAACGTTGGCCCTCAATCACCAAGCTCGGTCGGAGCTCTAGCTCGGTGTCCGTTGCCGCCGTGAGCGACGGTGCCAATATCGGCGAAAACATCTCCAAGGAGCTTCACACGGTCTATGTCGGTAAGTCCCGACGACCGTATTTTGTCAGCTCGAATGTCGTAACACACCCTCTGTTTCAGGAGTTGGTTGACAAGTCGTCGCCTGACGACGATGGTGTGGTGGTGGTTTCTTGTGAGGTTGTCATGTTTGAACATTTGTTGTGGATGTTGGAGAATGCGGCGGCGCTATTGGGCTCGACGGAGGAACTCGTCGAGTTTTACACTTGTTAA ATGGTCAAAGCTGGAACTCTCACCAAGCTCAAATCAGCCATTAAACGTTGGCCCTCAATCACCAAGCTCGGTCGGAGCTCTAGCTCGGTGTCCGTTGCCGCCGTGAGCGACGGTGCCAATATCGGCGAAAACATCTCCAAGGAGCTTCACACGGTCTATGTCGGTAAGTCCCGACGACCGTATTTTGTCAGCTCGAATGTCGTAACACACCCTCTGTTTCAGGAGTTGGTTGACAAGTCGTCGCCTGACGACGATGGTGTGGTGGTGGTTTCTTGTGAGGTTGTCATGTTTGAACATTTGTTGTGGATGTTGGAGAATGCGGCGGCGCTATTGGGCTCGACGGAGGAACTCGTCGAGTTTTACACTTGTTAA ATGGTCAAAGCTGGAACTCTCACCAAGCTCAAATCAGCCATTAAACGTTGGCCCTCAATCACCAAGCTCGGTCGGAGCTCTAGCTCGGTGTCCGTTGCCGCCGTGAGCGACGGTGCCAATATCGGCGAAAACATCTCCAAGGAGCTTCACACGGTCTATGTCGGTAAGTCCCGACGACCGTATTTTGTCAGCTCGAATGTCGTAACACACCCTCTGTTTCAGGAGTTGGTTGACAAGTCGTCGCCTGACGACGATGGTGTGGTGGTGGTTTCTTGTGAGGTTGTCATGTTTGAACATTTGTTGTGGATGTTGGAGAATGCGGCGGCGCTATTGGGCTCGACGGAGGAACTCGTCGAGTTTTACACTTGTTAA MVKAGTLTKLKSAIKRWPSITKLGRSSSSVSVAAVSDGANIGENISKELHTVYVGKSRRPYFVSSNVVTHPLFQELVDKSSPDDDGVVVVSCEVVMFEHLLWMLENAAALLGSTEELVEFYTC Homology
BLAST of Lag0003172 vs. NCBI nr
Match: XP_038899152.1 (auxin-responsive protein SAUR77 [Benincasa hispida]) HSP 1 Score: 219.9 bits (559), Expect = 1.2e-53 Identity = 113/123 (91.87%), Postives = 116/123 (94.31%), Query Frame = 0
BLAST of Lag0003172 vs. NCBI nr
Match: KAG6575422.1 (Auxin-responsive protein SAUR78, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 214.2 bits (544), Expect = 6.5e-52 Identity = 110/124 (88.71%), Postives = 117/124 (94.35%), Query Frame = 0
BLAST of Lag0003172 vs. NCBI nr
Match: KAG7013963.1 (hypothetical protein SDJN02_24132, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 213.8 bits (543), Expect = 8.5e-52 Identity = 109/124 (87.90%), Postives = 117/124 (94.35%), Query Frame = 0
BLAST of Lag0003172 vs. NCBI nr
Match: XP_022992444.1 (auxin-responsive protein SAUR50-like [Cucurbita maxima]) HSP 1 Score: 213.4 bits (542), Expect = 1.1e-51 Identity = 111/124 (89.52%), Postives = 115/124 (92.74%), Query Frame = 0
BLAST of Lag0003172 vs. NCBI nr
Match: XP_004141724.1 (auxin-responsive protein SAUR78 [Cucumis sativus] >KGN45457.1 hypothetical protein Csa_016551 [Cucumis sativus]) HSP 1 Score: 212.6 bits (540), Expect = 1.9e-51 Identity = 113/125 (90.40%), Postives = 117/125 (93.60%), Query Frame = 0
BLAST of Lag0003172 vs. ExPASy Swiss-Prot
Match: Q9LQI6 (Auxin-responsive protein SAUR77 OS=Arabidopsis thaliana OX=3702 GN=SAUR77 PE=1 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 1.5e-27 Identity = 69/131 (52.67%), Postives = 89/131 (67.94%), Query Frame = 0
BLAST of Lag0003172 vs. ExPASy Swiss-Prot
Match: Q9C9E1 (Auxin-responsive protein SAUR78 OS=Arabidopsis thaliana OX=3702 GN=SAUR78 PE=1 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 1.3e-26 Identity = 68/125 (54.40%), Postives = 85/125 (68.00%), Query Frame = 0
BLAST of Lag0003172 vs. ExPASy Swiss-Prot
Match: Q29PU2 (Auxin-responsive protein SAUR76 OS=Arabidopsis thaliana OX=3702 GN=SAUR76 PE=1 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 1.5e-19 Identity = 62/129 (48.06%), Postives = 79/129 (61.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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