
Lag0002879 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTAATTATAACAAATTGTCACTTTGTCAGCATAAGCATAGTTCAACTGGTATAAAATGAGTATTGGGCCCTAAGTTTTCGAGCTACATCGGGCAGTTGGCCGGTTAGCCCAACCATCACTCAAATTTCGCAAGTGATTTCTTTTGGTCAGAATCAGAAACCCAAAACCTCTCGGATCGGAAATGCTCTATTCGTTCGCTTCCCGCCGTTTCCTGCGCGTTTATTATTTCCTTCTCCGACGTGTTCCTCCCGCCGGCGATCCAATCCTTTTCCACCAAAACAATCAATCCCATTTCAGAGTCCAATTTCAAGTTCAATAGCCCGAAGCCTCGTCCGATACAACCTAATTTCGACCCTTCTACTGTTCGTGAGGTGCTTGATTCTTACTGCAATGACTGGAGGCGTTCATACGAGTTTTTCAACTTGGATTGA ATGACTAATTATAACAAATTGTCACTTTGTCAGCATAAGCATAGTTCAACTGAATCAGAAACCCAAAACCTCTCGGATCGGAAATGCTCTATTCGTTCGCTTCCCGCCGTTTCCTGCGCGTTTATTATTTCCTTCTCCGACGTGTTCCTCCCGCCGGCGATCCAATCCTTTTCCACCAAAACAATCAATCCCATTTCAGAGTCCAATTTCAAGTTCAATAGCCCGAAGCCTCGTCCGATACAACCTAATTTCGACCCTTCTACTGTTCGTGAGGTGCTTGATTCTTACTGCAATGACTGGAGGCGTTCATACGAGTTTTTCAACTTGGATTGA ATGACTAATTATAACAAATTGTCACTTTGTCAGCATAAGCATAGTTCAACTGAATCAGAAACCCAAAACCTCTCGGATCGGAAATGCTCTATTCGTTCGCTTCCCGCCGTTTCCTGCGCGTTTATTATTTCCTTCTCCGACGTGTTCCTCCCGCCGGCGATCCAATCCTTTTCCACCAAAACAATCAATCCCATTTCAGAGTCCAATTTCAAGTTCAATAGCCCGAAGCCTCGTCCGATACAACCTAATTTCGACCCTTCTACTGTTCGTGAGGTGCTTGATTCTTACTGCAATGACTGGAGGCGTTCATACGAGTTTTTCAACTTGGATTGA MTNYNKLSLCQHKHSSTESETQNLSDRKCSIRSLPAVSCAFIISFSDVFLPPAIQSFSTKTINPISESNFKFNSPKPRPIQPNFDPSTVREVLDSYCNDWRRSYEFFNLD Homology
BLAST of Lag0002879 vs. NCBI nr
Match: XP_038896131.1 (pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Benincasa hispida] >XP_038896132.1 pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Benincasa hispida]) HSP 1 Score: 109.0 bits (271), Expect = 2.6e-20 Identity = 52/67 (77.61%), Postives = 54/67 (80.60%), Query Frame = 0
BLAST of Lag0002879 vs. NCBI nr
Match: XP_022953157.1 (pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita moschata] >XP_022953158.1 pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita moschata] >XP_022953159.1 pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita moschata]) HSP 1 Score: 107.8 bits (268), Expect = 5.9e-20 Identity = 51/67 (76.12%), Postives = 53/67 (79.10%), Query Frame = 0
BLAST of Lag0002879 vs. NCBI nr
Match: XP_022148858.1 (pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Momordica charantia]) HSP 1 Score: 107.1 bits (266), Expect = 1.0e-19 Identity = 50/68 (73.53%), Postives = 56/68 (82.35%), Query Frame = 0
BLAST of Lag0002879 vs. NCBI nr
Match: XP_022991827.1 (pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita maxima] >XP_022991828.1 pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita maxima] >XP_022991829.1 pentatricopeptide repeat-containing protein At1g80550, mitochondrial [Cucurbita maxima]) HSP 1 Score: 105.1 bits (261), Expect = 3.8e-19 Identity = 50/67 (74.63%), Postives = 52/67 (77.61%), Query Frame = 0
BLAST of Lag0002879 vs. NCBI nr
Match: KAG7014158.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 104.8 bits (260), Expect = 5.0e-19 Identity = 51/67 (76.12%), Postives = 51/67 (76.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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