Lag0002837 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0002837
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr4: 46128682 .. 46131727 (+)
RNA-Seq Expression	Lag0002837
Synteny	Lag0002837

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTAGAAAGGACAATGATGAAGTAAAGGAGAATACATTGAATGCCTTGCCATAAAAGAAGGTGAATATCATTAAAAGTTTTAGAAGACATTATTTTATTGTTCCAAGATATTTTCTATGGCTAATAAATTTTTAAATAATTGTAGGTTATATTATTATACCATCATTCATCTAAAAAAAAAATAATAGAGACCAAAGAATTCGAACCTTAAACTCATAAGCAATAATGTAAACCAATTTAAGTTTTTGATTGAGCTGTCACAATTAAATAAACACGTATATAAGCTGAATAATTTAAGTGTTCGTCATAAGCTTTCTTTTTCCCTATAAATAAAAAATTAGAATTTATTGATAATAGAGAAGACATTAAAAACATACAACATAGAAAAATTAGGAATGATTTTTAAAATAAACCAATACTTACCTAAGCACTAAAAAGAGATGAATGAGTCCCACTAACCAATAAAAATGTTTTACATCAAAAAATAAGTAAGAATTTTGTTTTTTTTTTTAAAAAAAAAGAATATGGTTTCTTATCAATAATATTTACTTTAACTAGTTGAACTACAAATCCCTATACCCCATATTATAATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCTAGTGGTCCCATAGAATTAGTTAAGCAAAGAAAAAACCAAATTTAATCTACTAAAGCCACGGTTATTGTTTAAGATGCTAAAATGGAGTGTTATGTAAGGAAAGTTAAATCTTCTAAAAAAAAAAGGAAAGTTAAAAAGTTGTGTATGTCAAATATTTAACTTGAGATTATTTATTTATTAAATAAAAAAAATTAAAAAGAGTGTAAAATGTAAATAACCAAAAAAAAATATTTTCTTAAAAAGACTACAGGAAGTTGCAAAGTCATAGTGGGACAATCGTATATTACGTAGGCAACCGGTCACGTGTCGGTGGCCTCGTTTTCAGATATAAAACGGACTGCCCATTTGGTCACCTATAATTGGCGCTTCCCGTTTTCAATTTTTTCCCTCATAACTTTATTTTATCGTCCAATTCATTTCTCTGCTTCTCTGTTTCTCTCTCTCTCTGCAATTTCATAAACGTACTGATCGCAATTTCACTAGCGAAGAGGAACTGGAAGAAGCTTCAGAGTGAAAGGAGAGGGGGCAGTTCTGGCCGGACTAAGCACCATAGCCGTTCGACTCGGCGGCGGCAGCGGCGGTGCCGGTGGAGGATTTTGGTACCGGAGGAAAAAGAAGAGGCGGAGCCGGAGGAAGACGAAAGTTAAGGATCGGTTTATGGAGCTTTGGCACAAGATGATTTTCCCTGTCCGACGAGTTTGGCTCGCTGTTTCCGCTCGAGTTAGGGCTCGGAAGAACGGTTAGTCGCTTAATACTCTTCTTCTTTCGCCTTCCCAGTTTTTTTTTTTTTTTTGTCAAATCGGAGTTTGATTATGGCTTGATTTGATTGAATGTGATGATCTCGACTACATGAATTGCTTCTGATTGATGGAATTGTTGCTGTATTTCTGTTTCCATTAGTTTACTCTGGTTTCCGGTTTTTGTCCTCTGAACTGTGTGAACTCCATTATTGTTTCCATGCTGCTATTTGGAGTTGCTTACTGCAGAAGAATTTGTTTGTAACAACATCTAATTTTAATTTTCTGCTTAAGAGTATGATATGTGATTTGAGGGAAAAGATCCTTGTTCTCGATTTGCCATGAGAGGAAAATAGTAAAATAAAAGTTTGAAAGATATGGAAGGAGCCACCTAGAGAACCGAAAGGTGAAAATACGGTTTATAATACTAATTTCTTAGTCTTTTCCAGTTTTTTAATTCTTTTATCGACTTAGAATATGTTATATTATACCTTGATCTGTATGCATAGTTATTAGCCACTTAATCCAAGTCCAACCACTACGATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGGGGTGATTCTAGAAGATAATAAATGGCCATGTGATAATTCAACCTCTCCAGTACAATAATTTGGTTGGAAAAATCACAAGGAACCCATAATATGGTTGTGTATTATTATTTCTCCAAATTGACTCTAATTAAATGGCCAAAATATGGTTATGGACATCAAATCCTTTTAATTTTGGGAATTTTAGTTTACAAAGTAGGTGTCTCTAATGCTTAAACTACGAGTTATTTAATCTTAGGTCAAACATGATCTCTTGGAATATATAATTTTGTTCTTCAACTAAGATATTTATCCCAAGAAGTTTTCCCCATTTAATAATGCACAAAAAGGTCCCCACTGGCATTGCAGTTGAAGACAGAGTGAAAGATTAAAGCCACTTTTAAGCTTAAAGGTTTATTTTATAACAGTTTTGATTGTCCTGTTGTGATTCTTAACAGTCATCGTCCCACTTTAGACCAACGACGGCCACCAAATGCCCATTAGTTTTCGACTAGTGGTGACCCAATTTGATTTGTTTTTTCCCTCTATTACTATTATAAGCAGGAGGCCAAGAGGTGTGGCCGTCTTTAGACTTTTATTATTCTTTTTAGTATTGTCCAAGTCGCTTTTATTGACAATTTGACTAGCACCACAAATTTCCTCTACCCTCTTCAGTATTCACGTTCCAAATTTCCAATATATATATATGTAGAAAGAGAGAGCTTAGGTAAATTGGAGTTAGGTGAGTCCTGTCCCTTTAGATGGGCTGGGCCCAAAGGCCCATAAAATTCTGAATTTGTTGTGTGTGGGTGGCCCCAAGCCCCCAAAAATCTCTGTGATTTGAACTTATCTTTCATCCATAAGGTTGCTCTTTAGGAAGCTAAGCTAAGCAATTGTGTGAACTTTGCTGCTAACAGGAGCTGGCCTTTTGAAGCTTCATGATGATGTAGAAACCTGTGGATATGAAGATGTGAAGGTGATGTGGGAAATGCTGCGTCGATCGGAGTCGGAGCTGGTCGGTCACCAACCGAAGCGCAAGCAGCGGCCGTTCTGGAGAGTCTCTGTGTGGTCCAACCATGCTGCTGCAGCCTCCTCTTACACTGCAACTCATGCTTGA

mRNA sequence

ATGCTTAGAAAGGACAATGATGAACGAAGAGGAACTGGAAGAAGCTTCAGAGTGAAAGGAGAGGGGGCAGTTCTGGCCGGACTAAGCACCATAGCCGTTCGACTCGGCGGCGGCAGCGGCGGTGCCGGTGGAGGATTTTGGTACCGGAGGAAAAAGAAGAGGCGGAGCCGGAGGAAGACGAAAGTTAAGGATCGGTTTATGGAGCTTTGGCACAAGATGATTTTCCCTGTCCGACGAGTTTGGCTCGCTGTTTCCGCTCGAGTTAGGGCTCGGAAGAACGGAGCTGGCCTTTTGAAGCTTCATGATGATGTAGAAACCTGTGGATATGAAGATGTGAAGGTGATGTGGGAAATGCTGCGTCGATCGGAGTCGGAGCTGGTCGGTCACCAACCGAAGCGCAAGCAGCGGCCGTTCTGGAGAGTCTCTGTGTGGTCCAACCATGCTGCTGCAGCCTCCTCTTACACTGCAACTCATGCTTGA

Coding sequence (CDS)

ATGCTTAGAAAGGACAATGATGAACGAAGAGGAACTGGAAGAAGCTTCAGAGTGAAAGGAGAGGGGGCAGTTCTGGCCGGACTAAGCACCATAGCCGTTCGACTCGGCGGCGGCAGCGGCGGTGCCGGTGGAGGATTTTGGTACCGGAGGAAAAAGAAGAGGCGGAGCCGGAGGAAGACGAAAGTTAAGGATCGGTTTATGGAGCTTTGGCACAAGATGATTTTCCCTGTCCGACGAGTTTGGCTCGCTGTTTCCGCTCGAGTTAGGGCTCGGAAGAACGGAGCTGGCCTTTTGAAGCTTCATGATGATGTAGAAACCTGTGGATATGAAGATGTGAAGGTGATGTGGGAAATGCTGCGTCGATCGGAGTCGGAGCTGGTCGGTCACCAACCGAAGCGCAAGCAGCGGCCGTTCTGGAGAGTCTCTGTGTGGTCCAACCATGCTGCTGCAGCCTCCTCTTACACTGCAACTCATGCTTGA

Protein sequence

MLRKDNDERRGTGRSFRVKGEGAVLAGLSTIAVRLGGGSGGAGGGFWYRRKKKRRSRRKTKVKDRFMELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVSVWSNHAAAASSYTATHA

Homology

[Close]

BLAST of Lag0002837 vs. NCBI nr
Match: KAG7014198.1 (hypothetical protein SDJN02_24373, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 244.2 bits (622), Expect = 7.6e-61
Identity = 126/150 (84.00%), Postives = 132/150 (88.00%), Query Frame = 0


Query: 10  RGTGRSFRVKGEGAVLAGLSTIAVRLGGGSGGAGGGFWYRRKKKRRSRRKTKVKDRFMEL 69
           + +GR+   +   A LAGLSTIAVRLG   GG GGGFWYRRKKK RSR KTKVK RFMEL
Sbjct: 36  KSSGRTVSER-SAAGLAGLSTIAVRLG---GGGGGGFWYRRKKKTRSRSKTKVKHRFMEL 95

Query: 70  WHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGH 129
           WHKMIFPVRRVWL VSARVRARK+GAGLLKLHDDVETCGYEDVKVMWEMLRRSESELV H
Sbjct: 96  WHKMIFPVRRVWLTVSARVRARKSGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVSH 155

Query: 130 QPKRKQRPFWRVSVWSNHAAAASSYTATHA 160
           +PKRK RPFWRVSVWSNHAAAASSYTATHA
Sbjct: 156 RPKRKLRPFWRVSVWSNHAAAASSYTATHA 181

[Close]

BLAST of Lag0002837 vs. NCBI nr
Match: KAG6575646.1 (hypothetical protein SDJN03_26285, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 243.0 bits (619), Expect = 1.7e-60
Identity = 123/137 (89.78%), Postives = 125/137 (91.24%), Query Frame = 0


Query: 23  AVLAGLSTIAVRLGGGSGGAGGGFWYRRKKKRRSRRKTKVKDRFMELWHKMIFPVRRVWL 82
           A LAGLSTIAVRL    GG GGGFWYRRKKK RSR KTKVK RFMELWHKMIFPVRRVWL
Sbjct: 24  AGLAGLSTIAVRL---DGGGGGGFWYRRKKKTRSRSKTKVKHRFMELWHKMIFPVRRVWL 83

Query: 83  AVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVGHQPKRKQRPFWRVS 142
            VSARVRARK+GAGLLKLHDDVETCGYEDVKVMWEMLRRSESELV H+PKRK RPFWRVS
Sbjct: 84  TVSARVRARKSGAGLLKLHDDVETCGYEDVKVMWEMLRRSESELVSHRPKRKLRPFWRVS 143

Query: 143 VWSNHAAAASSYTATHA 160
           VWSNHAAAASSYTATHA
Sbjct: 144 VWSNHAAAASSYTATHA 157

[Close]

BLAST of Lag0002837 vs. NCBI nr
Match: XP_022143553.1 (uncharacterized protein LOC111013423 [Momordica charantia])

HSP 1 Score: 194.5 bits (493), Expect = 6.9e-46
Identity = 92/93 (98.92%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 67  MELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL 126
           MELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL
Sbjct: 1   MELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL 60

Query: 127 VGHQPKRKQRPFWRVSVWSNHAAAASSYTATHA 160
           VGHQPKRKQRPFWRVSVWSNHAAAASS+TATHA
Sbjct: 61  VGHQPKRKQRPFWRVSVWSNHAAAASSFTATHA 93

[Close]

BLAST of Lag0002837 vs. NCBI nr
Match: XP_038900267.1 (uncharacterized protein LOC120087349 [Benincasa hispida])

HSP 1 Score: 194.1 bits (492), Expect = 9.0e-46
Identity = 92/93 (98.92%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 67  MELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL 126
           MELWHKMIFPVRRVWLAVSARVRARK+GAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL
Sbjct: 1   MELWHKMIFPVRRVWLAVSARVRARKSGAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL 60

Query: 127 VGHQPKRKQRPFWRVSVWSNHAAAASSYTATHA 160
           VGHQPKRKQRPFWRVSVWSNHAAAASSYTATHA
Sbjct: 61  VGHQPKRKQRPFWRVSVWSNHAAAASSYTATHA 93

[Close]

BLAST of Lag0002837 vs. NCBI nr
Match: KGN45194.1 (hypothetical protein Csa_015637 [Cucumis sativus])

HSP 1 Score: 191.4 bits (485), Expect = 5.8e-45
Identity = 91/93 (97.85%), Postives = 91/93 (97.85%), Query Frame = 0


Query: 67  MELWHKMIFPVRRVWLAVSARVRARKNGAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL 126
           MELWHKMIFPVRRVWLAVSARVRARK GAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL
Sbjct: 1   MELWHKMIFPVRRVWLAVSARVRARKTGAGLLKLHDDVETCGYEDVKVMWEMLRRSESEL 60

Query: 127 VGHQPKRKQRPFWRVSVWSNHAAAASSYTATHA 160
           V HQPKRKQRPFWRVSVWSNHAAAASSYTATHA
Sbjct: 61  VSHQPKRKQRPFWRVSVWSNHAAAASSYTATHA 93

The following BLAST results are available for this feature:

BLAST of Lag0002837 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG7014198.1	7.6e-61	84.00	hypothetical protein SDJN02_24373, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6575646.1	1.7e-60	89.78	hypothetical protein SDJN03_26285, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022143553.1	6.9e-46	98.92	uncharacterized protein LOC111013423 [Momordica charantia]	[more]
XP_038900267.1	9.0e-46	98.92	uncharacterized protein LOC120087349 [Benincasa hispida]	[more]
KGN45194.1	5.8e-45	97.85	hypothetical protein Csa_015637 [Cucumis sativus]	[more]

BLAST of Lag0002837 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33181	OS01G0778500 PROTEIN	coord: 68..154
None	No IPR available	PANTHER	PTHR33181:SF19	OSJNBA0041A02.21-LIKE PROTEIN	coord: 68..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0002837.1	Lag0002837.1	mRNA